mRNA_P-wetherbeei_contig19485.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19485.2.1
Unique NamemRNA_P-wetherbeei_contig19485.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19485.2.1 vs. uniprot
Match: UPI0019330647 (class I SAM-dependent methyltransferase n=1 Tax=Sulfitobacter mediterraneus TaxID=83219 RepID=UPI0019330647)

HSP 1 Score: 107 bits (268), Expect = 6.130e-25
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 1
Query:   10 FYGQDLAAVHADAFEALAASAAETLLKALSGRDPSGRVLDLGCGAGPLSRRIGQKGFSTWGLDLSPALIALARERLPRAEFHCGSVLNADLPKAVAVAAVGEVLNYATAQD-PGGLTRVFQRVFDAL 387
            FY +DLAA+HA   EALA +AAE LL  +     +GRVLDLGCGAGPLS  +   G   +G+DLS  L+++AR+R+P   F    +L+ D     A+AA+GEV+NYATA   PG L  +F+R  ++L
Sbjct:    7 FYARDLAAIHAKHHEALARAAAEVLLSLMP---TAGRVLDLGCGAGPLSFLLTADGHEVYGIDLSAELLSIARQRVPTGRFEQCDILSTDFGAVDAIAAIGEVVNYATASGGPGALENLFRRARESL 130          
BLAST of mRNA_P-wetherbeei_contig19485.2.1 vs. uniprot
Match: A0A7V1W9J8_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Chthonomonadales bacterium TaxID=2282151 RepID=A0A7V1W9J8_9BACT)

HSP 1 Score: 106 bits (265), Expect = 3.410e-24
Identity = 65/132 (49.24%), Postives = 86/132 (65.15%), Query Frame = 1
Query:   13 YGQDLAAVHADAFEALAASAAETLLKALSGRD-PSGRVLDLGCGAGPLSRRIGQKGFSTWGLDLSPALIALARERLPRAEFHCGSVLNADLPKAVAVAAVGEVLNY-ATAQD-PGGLTRVFQRVFDALEPGG 399
            YG DLA VH   F  +A +AA TL++ L+     +GRV+DLGCG+G L+ R+   G+   G+DLSP ++ALARER P A F  GS L+A++P   AVAAVGEV +Y A ++D    L  +FQR   AL PGG
Sbjct:   15 YGADLARVHDSGFGQVALAAAGTLMRLLAESGFAAGRVVDLGCGSGVLAARLEGSGYHVLGIDLSPEMVALARERAPAAGFRVGSCLDAEIPPCCAVAAVGEVFSYLADSRDLDARLAGLFQRAHAALLPGG 146          
BLAST of mRNA_P-wetherbeei_contig19485.2.1 vs. uniprot
Match: UPI00140D7F0E (class I SAM-dependent methyltransferase n=1 Tax=Thioalkalivibrio sp. XN279 TaxID=2714953 RepID=UPI00140D7F0E)

HSP 1 Score: 104 bits (260), Expect = 1.110e-23
Identity = 66/161 (40.99%), Postives = 92/161 (57.14%), Query Frame = 1
Query:    1 MDDFYGQDLAAVHADAFEALAASAAETLLKALSGRDPS-GRVLDLGCGAGPLSRRIGQKGFSTWGLDLSPALIALARERLPRAEFHCGSVLNADLPKAVAVAAVGEVLNYATAQDPG--GLTRVFQRVFDALEPGGCV---PLRPGRAWTCGRWKELRGGG 465
            M   Y +DL+ +H   F  LA +AAE LL+ L+      G V+DLGCG+G L+  +   G+   G+D+SPA++ +AR R+P A F C S+L A+LP ++AV AVGE  NY   +      L  +F+R+  ALEPGG +      PGR    GR K    GG
Sbjct:    1 MSHAYREDLSWIHDLGFGDLARNAAEVLLRELAADGVGEGLVVDLGCGSGILAETLCNSGYDVLGIDISPAMLDMARHRVPEARFRCESLLTAELPASIAVVAVGECFNYRFDESNSREALRALFRRIHAALEPGGLLLFDAAGPGRVPGDGRLKTYVDGG 161          
BLAST of mRNA_P-wetherbeei_contig19485.2.1 vs. uniprot
Match: A0A6M1Y6B4_9GAMM (Class I SAM-dependent methyltransferase n=1 Tax=Wenzhouxiangella sp. XN24 TaxID=2713569 RepID=A0A6M1Y6B4_9GAMM)

HSP 1 Score: 103 bits (258), Expect = 2.180e-23
Identity = 66/148 (44.59%), Postives = 88/148 (59.46%), Query Frame = 1
Query:    1 MDDFYGQDLAAVHADAFEALAASAAETLLKALS--GRDPSGRVLDLGCGAGPLSRRIGQKGFSTWGLDLSPALIALARERLPRAEFHCGSVLNADLPKAVAVAAVGEVLNYATAQDPG--GLTRVFQRVFDALEPGGCV---PLRPGR 423
            M   Y +DL+ +H   F  LA +A E LL+ L+  G D +GRV+DLGCG+G L+  +   G+   G+DLSPA+I LARER+P   F C S+L A+LP  VAV AVGE  NY   +      L  +F R+  AL+PGG +      PGR
Sbjct:    1 MSHAYREDLSWIHDLGFGDLARNAGELLLRKLAEEGID-AGRVIDLGCGSGVLAAMVSDAGYDVLGIDLSPAMIELARERVPDGRFLCESLLKAELPSCVAVVAVGECFNYRFDESVSREALRGLFGRIHAALQPGGLLLFDAAEPGR 147          
BLAST of mRNA_P-wetherbeei_contig19485.2.1 vs. uniprot
Match: A0A6B3UM36_9CAUL (Class I SAM-dependent methyltransferase n=2 Tax=unclassified Caulobacter TaxID=2648921 RepID=A0A6B3UM36_9CAUL)

HSP 1 Score: 102 bits (254), Expect = 8.740e-23
Identity = 66/156 (42.31%), Postives = 85/156 (54.49%), Query Frame = 1
Query:   10 FYGQDLAAVHADAFEALAASAAETLLKALSGRDPSGRVLDLGCGAGPLSRRIGQKGFSTWGLDLSPALIALARERLPRAEFHCGSVLNADLPKAVAVAAVGEVLNY---ATAQDPGGLTRVFQRVFDALEPGG------CVPLRPG----RAWTCG 438
            FYG D+A VH   F   A +AA+ +L+ +     +  V+DLGC  G L+ R+  +G    G+DLS  L+ LAR+R P A F   S    DLP+A AV A+GEV+NY    T   P  LT  F++V DAL PGG        PLR G    R WT G
Sbjct:   10 FYGADIAYVHDAGFSDFARAAADEVLRRMPAEKAA--VVDLGCAGGVLAERLSGRGLEVVGVDLSAPLLELARQRAPDARFVQASAFEVDLPRAAAVCAIGEVINYQHDGTDLGPDRLTGFFRKVHDALVPGGIFLFDAAAPLRVGKSVRRGWTEG 163          
BLAST of mRNA_P-wetherbeei_contig19485.2.1 vs. uniprot
Match: A0A2V8T201_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8T201_9BACT)

HSP 1 Score: 101 bits (252), Expect = 1.610e-22
Identity = 58/132 (43.94%), Postives = 83/132 (62.88%), Query Frame = 1
Query:   13 YGQDLAAVHADAFEALAASAAETLLKALSGRD-PSGRVLDLGCGAGPLSRRIGQKGFSTWGLDLSPALIALARERLPRAEFHCGSVLNADLPKAVAVAAVGEVLNYA--TAQDPGGLTRVFQRVFDALEPGG 399
            Y  DLA +H   F   A ++A  LL+ L   D  +G V+DLGCG+G  +R +   G+   G+D+SPA+IA+AR+R+PR EF  GS+L   LP+  AV ++GE LNY    +     + R+F+RV+ ALEPGG
Sbjct:    7 YKADLAYIHDVGFGDFAKNSAPGLLRILRRDDIKTGLVVDLGCGSGLWARELSDAGYDVLGVDISPAMIAIARKRVPRGEFETGSLLKVKLPRCGAVTSLGECLNYLFDASNRMSEIRRLFRRVYSALEPGG 138          
BLAST of mRNA_P-wetherbeei_contig19485.2.1 vs. uniprot
Match: A0A7V8NTU8_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Candidatus Acidoferrum panamensis TaxID=2741543 RepID=A0A7V8NTU8_9BACT)

HSP 1 Score: 99.4 bits (246), Expect = 2.010e-22
Identity = 70/158 (44.30%), Postives = 88/158 (55.70%), Query Frame = 1
Query:    1 MDDFYGQDLAAVHADAFEALAASAAETLLKAL-SGRDPSGRVLDLGCGAGPLSRRIGQKGFSTWGLDLSPALIALARERLPRAEFHCGSVLNADLPKAVAVAAVGEVLNY-ATAQDPGGL-TRVFQRVFDALEPGGCV---------PLRPGRAWTCG 438
            M+  Y  DLA VHA AFE LA  AA  +++ L S R    +VLD+GCGAGPL+R +   GF   GLD S  L+ LA  R+P+A F  G++ +A +    AV AVGE L Y A   D  GL +  FQRV  AL PGG +         P   GR W+ G
Sbjct:    1 MEPLYQCDLAYVHAAAFEMLARGAAGEIVRRLRSSRAQLRKVLDVGCGAGPLTRALVDAGFDATGLDTSAELLKLACTRVPQAHFIRGNIYDAQIHDYDAVVAVGEPLTYHAEGTDADGLISGFFQRVAQALPPGGVLIFDLIGLGEPSLAGRTWSSG 158          
BLAST of mRNA_P-wetherbeei_contig19485.2.1 vs. uniprot
Match: A0A2V9LC93_9BACT (Class I SAM-dependent methyltransferase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9LC93_9BACT)

HSP 1 Score: 100 bits (250), Expect = 2.890e-22
Identity = 65/160 (40.62%), Postives = 90/160 (56.25%), Query Frame = 1
Query:    1 MDDFYGQDLAAVHADAFEALAASAAETLLKAL-SGRDPSGRVLDLGCGAGPLSRRIGQKGFSTWGLDLSPALIALARERLPRAEFHCGSVLNADLPKAVAVAAVGEVLNYA--TAQDPGGLTRVFQRVFDALEPGGCVPL---RPGRAWTCGRWKELRGG 462
            M + YG DLA +H   F   A SAA  LLK +  GR   G V+DLGCG+G  +R +   G+   G+D+S A+I LAR+R P+AEF   S L A++P   AV A+GE  +Y    +    GL+ +F+RV + L+PGG +      PGR    G  +  R G
Sbjct:    1 MVNAYGSDLAYIHDVGFGHFARSAAPGLLKLIRQGRKVRGLVVDLGCGSGIWARELCSAGYDVLGIDISDAMITLARKRAPKAEFRRASFLTAEIPPCAAVTAMGECFSYLFDASNTKRGLSSLFRRVHEVLQPGGLLIFDVAAPGRVPGPGPQRSYREG 160          
BLAST of mRNA_P-wetherbeei_contig19485.2.1 vs. uniprot
Match: A0A6J4QYZ2_9ACTN (Methyltransf_25 domain-containing protein n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4QYZ2_9ACTN)

HSP 1 Score: 100 bits (248), Expect = 5.790e-22
Identity = 64/144 (44.44%), Postives = 83/144 (57.64%), Query Frame = 1
Query:   13 YGQDLAAVHADAFEALAASAAETLLKALSGRDPS-GRVLDLGCGAGPLSRRIGQKGFSTWGLDLSPALIALARERLPRAEFHCGSVLNADLPKAVAVAAVGEVLNYA--TAQDPGGLTRVFQRVFDALEPGGCVPLR---PGRA 426
            Y +DLA VH   F  LA +AA  LL+ L    P  G V+DL CG+GPLSR +   G+   G+D+S A++ +A ER+P   F  GSV   DLP  VAVAAVGE +NY        G L  + +R+ +AL PGG +      PGRA
Sbjct:    6 YREDLAYVHDAGFLGLAENAAPVLLEELRRGGPGRGLVVDLCCGSGPLSRELSDAGYDVLGVDVSGAMVRMAMERVPEGRFVEGSVFALDLPPCVAVAAVGECINYLFDEGNTRGALEGLLRRIHEALRPGGVLLFDFAGPGRA 149          
BLAST of mRNA_P-wetherbeei_contig19485.2.1 vs. uniprot
Match: A0A2N5KLC9_9ACTN (Class I SAM-dependent methyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5KLC9_9ACTN)

HSP 1 Score: 98.6 bits (244), Expect = 2.170e-21
Identity = 67/150 (44.67%), Postives = 88/150 (58.67%), Query Frame = 1
Query:    1 MDDFYGQDLAAVHADAFEALAASAAETLLKAL-SGRDPSGRVLDLGCGAGPLSRRIGQKGFSTWGLDLSPALIALARERLPRAEFHCGSVLNADLPKAVAVAAVGEVLNYATAQDPG----GLTRVFQRVFDALEPGGCV---PLRPGRA 426
            M + Y +DLA VH   F  LAA+AA  L + L SG    G V+DL CG+G LS+ +   G+   G+D+S A++ +ARER+P   F  GS+L+ DLP  VAVAAVGE  NY    D G    GL  + +R+  AL PGG +      PGRA
Sbjct:    1 MSEGYREDLAYVHHAGFGRLAANAASLLTETLRSGGLQRGLVVDLCCGSGHLSQSLSDAGYDVLGVDISGAMVEMARERVPEGRFVEGSILSLDLPPCVAVAAVGECFNYLF--DEGNTEEGLGDLLRRIHAALVPGGVLIFDAAGPGRA 148          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19485.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00193306476.130e-2548.03class I SAM-dependent methyltransferase n=1 Tax=Su... [more]
A0A7V1W9J8_9BACT3.410e-2449.24Class I SAM-dependent methyltransferase n=1 Tax=Ch... [more]
UPI00140D7F0E1.110e-2340.99class I SAM-dependent methyltransferase n=1 Tax=Th... [more]
A0A6M1Y6B4_9GAMM2.180e-2344.59Class I SAM-dependent methyltransferase n=1 Tax=We... [more]
A0A6B3UM36_9CAUL8.740e-2342.31Class I SAM-dependent methyltransferase n=2 Tax=un... [more]
A0A2V8T201_9BACT1.610e-2243.94Class I SAM-dependent methyltransferase n=1 Tax=Ac... [more]
A0A7V8NTU8_9BACT2.010e-2244.30Class I SAM-dependent methyltransferase n=1 Tax=Ca... [more]
A0A2V9LC93_9BACT2.890e-2240.63Class I SAM-dependent methyltransferase n=2 Tax=Ac... [more]
A0A6J4QYZ2_9ACTN5.790e-2244.44Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A2N5KLC9_9ACTN2.170e-2144.67Class I SAM-dependent methyltransferase n=1 Tax=Ac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19485contigP-wetherbeei_contig19485:465..1176 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog329726.AM1_5387
PFAMsMethyltransf_25
Model size712
Max annot lvl1117|Cyanobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.41e-21
EggNOG OGsCOG4976@1|root,COG4976@2|Bacteria,1G290@1117|Cyanobacteria
DescriptionMethyltransferase domain
Cds size504
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186173.8923962-UTR-P-wetherbeei_contig19485:464..6721683186173.8923962-UTR-P-wetherbeei_contig19485:464..672Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig19485 465..672 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186173.9007924-CDS-P-wetherbeei_contig19485:672..11761683186173.9007924-CDS-P-wetherbeei_contig19485:672..1176Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19485 673..1176 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19485.2.1prot_P-wetherbeei_contig19485.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19485 673..1176 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19485.2.1

>prot_P-wetherbeei_contig19485.2.1 ID=prot_P-wetherbeei_contig19485.2.1|Name=mRNA_P-wetherbeei_contig19485.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp
MDDFYGQDLAAVHADAFEALAASAAETLLKALSGRDPSGRVLDLGCGAGP
LSRRIGQKGFSTWGLDLSPALIALARERLPRAEFHCGSVLNADLPKAVAV
AAVGEVLNYATAQDPGGLTRVFQRVFDALEPGGCVPLRPGRAWTCGRWKE
LRGGGVLGHRRGGDGKR*
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mRNA from alignment at P-wetherbeei_contig19485:465..1176-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19485.2.1 ID=mRNA_P-wetherbeei_contig19485.2.1|Name=mRNA_P-wetherbeei_contig19485.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=712bp|location=Sequence derived from alignment at P-wetherbeei_contig19485:465..1176- (Phaeothamnion wetherbeei SAG_119_79)
ATGGATGATTTCTACGGACAAGACCTCGCCGCCGTCCACGCAGACGCCTT CGAGGCGCTCGCGGCGTCGGCGGCGGAGACCCTGCTGAAGGCGCTTTCCG GACGCGACCCTTCGGGGCGGGTGCTCGACCTTGGCTGCGGCGCCGGCCCG CTGAGCCGGCGCATCGGCCAGAAGGGATTCTCTACCTGGGGGCTGGACCT TTCGCCCGCTTTGATCGCGCTGGCTCGGGAGCGCTTGCCACGGGCCGAGT TCCACTGCGGCTCCGTGCTCAATGCGGATCTGCCGAAGGCGGTGGCCGTC GCCGCCGTGGGCGAGGTGCTCAACTATGCGACCGCGCAAGACCCCGGCGG CCTGACGCGCGTGTTCCAGCGCGTGTTTGACGCATTGGAGCCTGGGGGGT GTGTTCCTCTTCGACCTGGCAGGGCCTGGACGTGTGGGCGCTGGAAGGAG CTTCGCGGAGGCGGCGTCCTGGGCCATCGGCGTGGTGGCGACGGAAAGCG ATGACCAGCTCGTCCGGAGGATCACCACGTTTCGAGACCTCGGCGCCGGC GCCTGGAGCCGCTCATTCGAAGAACATCGACTGCGACTGTGGCCTGCGGT GGGCGTGATCGAGCAGCTGGCCTCCTGCGGTTTCCGCGTGGAAGAGCTTC CCGGCTACGACGGCGTCGCGATGCCGCCATCTCTCCACGTCTATCTCGCG GCGAAGCCGAGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19485:465..1176-

>mRNA_P-wetherbeei_contig19485.2.1 ID=mRNA_P-wetherbeei_contig19485.2.1|Name=mRNA_P-wetherbeei_contig19485.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig19485:465..1176- (Phaeothamnion wetherbeei SAG_119_79)
ATGGATGATTTCTACGGACAAGACCTCGCCGCCGTCCACGCAGACGCCTT
CGAGGCGCTCGCGGCGTCGGCGGCGGAGACCCTGCTGAAGGCGCTTTCCG
GACGCGACCCTTCGGGGCGGGTGCTCGACCTTGGCTGCGGCGCCGGCCCG
CTGAGCCGGCGCATCGGCCAGAAGGGATTCTCTACCTGGGGGCTGGACCT
TTCGCCCGCTTTGATCGCGCTGGCTCGGGAGCGCTTGCCACGGGCCGAGT
TCCACTGCGGCTCCGTGCTCAATGCGGATCTGCCGAAGGCGGTGGCCGTC
GCCGCCGTGGGCGAGGTGCTCAACTATGCGACCGCGCAAGACCCCGGCGG
CCTGACGCGCGTGTTCCAGCGCGTGTTTGACGCATTGGAGCCTGGGGGGT
GTGTTCCTCTTCGACCTGGCAGGGCCTGGACGTGTGGGCGCTGGAAGGAG
CTTCGCGGAGGCGGCGTCCTGGGCCATCGGCGTGGTGGCGACGGAAAGCG
ATGA
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