mRNA_P-wetherbeei_contig1947.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A6H5K446_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K446_9PHAE) HSP 1 Score: 167 bits (423), Expect = 2.530e-40 Identity = 102/289 (35.29%), Postives = 153/289 (52.94%), Query Frame = 3
Query: 99 WPLWERCVDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLP--RAPE----IPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLDDSVDWSWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVA-PGQDPATYTEEQTLKMSVAGDLVGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCARDV-DDGEEAE--HAGGQGPVADPERP-SYGTYSPP 932
+PL R + L++W+L+ LFQ+FLT++LD ++ WS+AVV SP+ W G+ + ++ +P R+ E G P D E + A+ K++ A + KD W++Q F++ +LD VDW+WW VF P W+ G L+ Y+ +A N + G+ T+E+ ++M A L+ W+ V+AV IAGADYS F +F+P ++IAG LLCC CFICC RD+ D G++A GG G P SYGTY+PP
Sbjct: 194 FPLPLRVLALVKWTLLFLFQVFLTMQLDGDIDWSYAVVGSPLLAWMGLLIVGHVYDATRPVPQDRSEESILNAEEEGIPPDVE--------------KREQAIAKRSEARTAVAKDCIWMLQLVFLIIKLDGDVDWNWWLVFLPTWIVLFG----QLVGYYVDYSLARNLSAGIEGKAEEELTQEERVRMVAASQLLVHASXXXXXWVFTVVTVVLAVNAIAGADYSTFVIFIPQFIIAGTLLCCATCFICCIRDLGDQGDDAADPEQGGSGASTSQHPPGSYGTYNPP 464
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A836CHD5_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD5_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.110e-23 Identity = 88/287 (30.66%), Postives = 125/287 (43.55%), Query Frame = 3
Query: 114 RCVDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLPRAPE-------------------------IPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLDDSVDWSWWAVFSPVWLAFAGFAALNLLTY----HSASVIAANANVAPGQDPATYTEEQTLK----------------MSVAGDLVGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCAR 839
R + L QWSL +L QIFLTL+LD N+ WSWA V P VW L + LPR + G + E EGA Q A+ A +L + A L + ++Q ++ RLD + W WWAV+ P + A A LL Y H S + AN + T +EE +K M A L + + C +W + + ++AVA++AGAD+S F +F+P++ AG L+C M C ICC R
Sbjct: 215 RVLGLAQWSLFILQQIFLTLRLDSNITWSWACVLVPWLVWESATLCATLLRAMLPLPREDDQYYQVVRXXXXXXXXXXXXXXXXXXXXXQGILEEGEGEGA-------QDAKRAAVMLVRQKARGELFIKVTRLLQGIMLILRLDHDITWDWWAVWWPTYAYVAFHLASLLLVYLQSLHLLSDLTAN-------EAGTLSEEDAMKASGLFADAAAAGAQACMEFAQMLRSQAKAGCFSWGVLLVMVLLAVAKMAGADFSTFIIFIPVFAAAGCLVCTMSCLICCMR 487
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A4D9D6L0_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6L0_9STRA) HSP 1 Score: 103 bits (256), Expect = 4.430e-19 Identity = 83/272 (30.51%), Postives = 118/272 (43.38%), Query Frame = 3
Query: 114 RCVDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLPRAPEIPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLDDSVDWSWWAVFSPVWLAFAG--------------------FAALNLLTYHSASVI-AANANVAPGQDPATYTEEQTLKMSVAGDLVGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCARDVD---DGE 857
R ++ +Q S VLFQ+FLTLKLD V W W+ +F+P W G++ +NL P ++ EE AMA + VL+ IV + + RLD+ + +WW VF+P+WL FA AA+ SV+ V G + A E+ L S A L C + + ++ VARI GA +SVF VF+P++VI G C + C +CC RD D DGE
Sbjct: 199 RVLNAVQLSCNVLFQVFLTLKLDKVVPWDWSRIFAPWLAWEGIQLFRNLTVTSTGGGPTPFATSA-----EEGVLLRAMAVRQAMLGLQHGVLR--------------IVFCALAILRLDEKIRVTWWVVFTPLWLFFATQFVGICVEYALAKRLQEGLIAAAIATAAERGGSVVDPETGEVELGPEEAMIQEQTELMASRASMLA-------CQAAIVLVMALLGVARIEGAHFSVFLVFLPVFVIVGCFTCSLGCAVCCVRDADGVVDGE 444
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A7S2L9P4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L9P4_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 7.080e-12 Identity = 88/317 (27.76%), Postives = 136/317 (42.90%), Query Frame = 3
Query: 3 LLLYAHNVARGRKP-PEGASPEEEEASAAEAAAWPLWERCVDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLPRAPEI------PASGTPGDEED--EGAAAMAFEEQRARHADAVLK-KAAALNVLLKDMFWIVQASFVVARLDDSVDWSWWAVFSPVWL-----AFAGFAALNLLTYHSASVIAANANVAPGQ----------DPATYTEEQTLKMSVAG--DLVGRFYSSCCTWIL-----GFCVTVVA--VARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCARDVDD 851
L + + + G P PEG PEEE P +R L+ L V F+I + L+LDD + W+VVF P++++ + K + ++ ++ P S +E D G + A LK K A + LLK F V ++ +LDD +DWSWWAVF+P W+ + LN+ A+ AA N G D A ++Q + ++ A +L R F + +V V + GA Y+ ++ P+ IAGL+LCC+ C I C RDV +
Sbjct: 177 FLTHLNMLRAGETPRPEG-MPEEEWVDPL-----PYSKRRFIALRHILKVTFEILVALRLDDVIECDWSVVFLPLWIFEALNIRKKMVVANLQILTIEDLEVLLGKPFSEFTPEERDAISGKDFAVVPSMDSPQAMIALKMKTMAQHDLLKIFFRDVFLVLLILQLDDEIDWSWWAVFTPFWILSCCVCCGAYMQLNIA---QAAATAAGVNTDLGNADGTTNYGAFDDAESGQQQGINLTEAEKEELRERXXXXXXXXXXXXXXQAFVLLIVCLLVGKANGAGYAAIWIISPILFIAGLILCCLGCAIYCLRDVPE 484
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: K3X1J6_GLOUD (J domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1J6_GLOUD) HSP 1 Score: 78.6 bits (192), Expect = 1.780e-11 Identity = 77/254 (30.31%), Postives = 118/254 (46.46%), Query Frame = 3
Query: 129 LQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLPRAPEIPASGTPG----DEEDEGAAAMAFEEQRARHADAVLKKAAAL-NVLLKDMFWI----VQASFVVARLDDSV-DWSWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKMSV------AGDLVGRFYSSCCTWILGFCVT--VVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCA 836
L+ +L+++ QIF+ +KL+ NV WS VF P FV+ G+ ++ + G G +E EGA A DA+ K+ L V+L +MF I VQA + ++D ++ D SWW VF P+W+ F + + Y A A N + ++P T + + SV AG C +G + + AR+ G +S FYV +P ++IAGL+LC FICCA
Sbjct: 190 LKQALLLVLQIFIAMKLNHNVKWSVMEVFIPYFVYDGLSFVEAIV--------------GGIVGYKVLTKESEGAGVSA--------TDAIKKQRKLLVAVVLLNMFLIASRLVQAVLLALKIDGNLGDASWWLVFFPIWIYVLYFLSHPIKRYIHAKEKAKNQS--KPKEPTLPTHDAYTRESVHEEDEDAGAKYPLMDVLCTIGFIGVITSPYFILTARLDGGSFSAFYVLLPWFIIAGLVLC----FICCA 415
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A8H7ER49_9FUNG (J domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7ER49_9FUNG) HSP 1 Score: 76.3 bits (186), Expect = 9.880e-11 Identity = 68/272 (25.00%), Postives = 119/272 (43.75%), Query Frame = 3
Query: 105 LWERCVDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNL------AQICAKLPRAPEIPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFW-----IVQASFVVARLDDSVDWSWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKMSVAGDLVGRFYSSCCTWILGFCVTVVAVARIAGADY-SVFYVFMPLYVIAGLLLCCMVCFICC------ARDVDDGEEAE 866
L+ R + L+ W L++LFQ+F+ L+LDD V WS V+F+P F G+ + ++ + + +A E G G + A+AF E FW +V VV R+D ++ SW VF P++L +A +L Y S + P + A + + +VA ++G + + + + R+ G Y S+ +VF+P++++ LL+CC C + C D+DD E+ +
Sbjct: 189 LFRRLLYLVYWVLLLLFQVFIVLRLDDKVTWSATVIFAPYFALEGIHFISSVINFAVAVMVFTRQVKADEDYKGGRLGMQ----VLALAFHE-----------------------FWFFVLRLVLFILVVLRIDGTIQCSWAVVFIPLYLVGVKYALQLMLRYRMYSRL-------PQPEIAQQGKITVILGAVAFIIIGTLF---------YALVGLLARRLDGLSYISMSHVFVPVFIVLSLLICCSGCCLPCMLMISSVADLDDPEQQQ 417
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A433D4F2_9FUNG (J domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D4F2_9FUNG) HSP 1 Score: 74.3 bits (181), Expect = 4.290e-10 Identity = 77/267 (28.84%), Postives = 119/267 (44.57%), Query Frame = 3
Query: 99 WPLWERCVDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLPRAPEIPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFW----IVQASFVVARLDDSVDW--SWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKMSVAGDLVGR-FYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCC----MVCFICCAR----DVDDG 854
W + V LL +SL+VLFQ+F+ L+LD V S A++F P FV + N+ L R I AS DEG L + + +W +VQA +V RLD + SW VF P++L +A +L Y + S I P + AT + + +VA L G FY+ ++G VT ++ G+ S+ V +P++++ +LLCC M C +C +R D+D+G
Sbjct: 200 WNRFRNAVTLLYFSLIVLFQVFIVLRLDGWVELSAAIIFIPYFVVETINLFPNIFNYILTLQR---ISASA------DEGRLTFTTN----------------LTLFFANFWWFAIRLVQAVLLVLRLDGVIPTTCSWAIVFIPLYLIGLKYAIQLVLAYRAFSRI-------PEFEVATQGKMSVMLGAVALFLFGAPFYT-----VIGLLVT-----KLDGSSISMSNVLIPVFLVLSILLCCAGICMPCMLCVSRASFDDMDEG 424
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A0P1AZX2_PLAHL (Molecular chaperone (DnaJ superfamily) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZX2_PLAHL) HSP 1 Score: 74.3 bits (181), Expect = 4.420e-10 Identity = 67/260 (25.77%), Postives = 114/260 (43.85%), Query Frame = 3
Query: 141 LVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLA------QICAKLPRAPEIPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLDDSVD-WSWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKMSVAGD---------LVGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCA--RDVDDGEEAE 866
L+++ QIFL LKL+ +V W+ VF P F + G+ L+ +A Q+ K + + T +QR+ AV +K +L ++ IVQ + ++D+ +D SWW +F P+WL F + + Y A A + Q P ++ + + SV D LV + IL V +++ AR+ +S Y+ +P ++ GL+ C + C I C +D D +E E
Sbjct: 196 LLLVLQIFLALKLNQDVNWTLLQVFIPYFGYDGLNLLETIASGYLGYQMLTKTSEGAGVSQTET-------------ITKQRSALVVAVFRK------ILLNIARIVQVILLGLKVDEELDDTSWWLIFLPIWLYLVYFGSYPIRKYLRAKAKAKEPKI---QSPQQHSHDAYTRESVKNDEDEVTSKYPLVDALCTLSVIGILSSPVFILS-ARLQNESFSTIYILLPWLILVGLVFCIICCAISCFSFQDPDTNQEPE 432
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: A0A2P6NS88_9EUKA (Acetate--CoA ligase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NS88_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 1.670e-9 Identity = 71/260 (27.31%), Postives = 117/260 (45.00%), Query Frame = 3
Query: 120 VDLLQWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFVWYGVRCLKNLAQICAKLPRAPEIPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLDDSVDWSWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKMSVAGDL---VGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCARDVDD--GEEAEHAGGQG 884
V Q++ + FQI L + L+ + WSWAV F P+++ G++ +K L I K A E+ + G A+ F + L+K + +L+ W F+VA++ ++ WSWW + P+WL+ A + ++ + + N AP D EEQ + SVA L VG + L + +V + +V F+P+++IAGL+LCC +C C GEE E +G
Sbjct: 910 VGAAQYAAALSFQIMLVINLETH-RWSWAVAFIPLYIVLGLQFIKKLNSI-KKAKFASEMAS----------GVASFKF---GLGYFGWCLRKFVFILLLI----WFT--GFLVAKISTTITWSWWVIAIPIWLSIAYRMFITIMDGKAIT------NAAPSTDD----EEQDGRQSVAKALNIVVGVML----VFALVLAILIVVILEYGRIKLAV--AFIPIFIIAGLVLCCFMCTAPCXXXXXXAAGEEGEQPDEEG 1132
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Match: F0WUA8_9STRA (Uncharacterized protein AlNc14C268G9929 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WUA8_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.480e-9 Identity = 72/263 (27.38%), Postives = 112/263 (42.59%), Query Frame = 3
Query: 132 QWSLVVLFQIFLTLKLDDNVGWSWAVVFSPVFV-----WY-----GVRCLKNLAQICAKLPRAPEIPASGTPGDEEDEGAAAMAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLD-DSVDWSWWAVFSPVWLAFAGFAALNLLTYHSASVIAANANVAPGQDPATYTEEQTLKMS-VAGDLVGRFYSSCCTWILGFCVTVVAVARIAGADYSVFYVFMPLYVIAGLLLCCMVCFICCA------RDVDDGEEAE 866
+WSL+VL QIF+ L+LD ++ W+ V+ P F+ W+ G + L L + C E +G AM +Q+ +L+K A VL+ + I+Q V A+LD D SWW +F P+W +L Y + + + AP D +E T + V LVG + +L AR+ +S ++ +P V+ G+LLC + C I C DV+ EE E
Sbjct: 190 KWSLLVLVQIFIALRLDHDLSWNSRVILLPYFIFDLLTWFEIVIDGYKELSMLKEQC------------------EIDGVQAMDLIQQQ---RSGLLRKIRARLVLV--LLRILQVLLVTAKLDGDLGSTSWWLIFIPIWTVIGHHLLQPVLKYLLSVLQSRQKRDAPEADQFASSESSTFSATDVIYPLVGVSILASPYVLLS--------ARLQSEHFSTLFIILPWLVLIGMLLCLVCCVITCLGFRPRHEDVEFSEEDE 421 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1947.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1947.1.1 >prot_P-wetherbeei_contig1947.1.1 ID=prot_P-wetherbeei_contig1947.1.1|Name=mRNA_P-wetherbeei_contig1947.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp MAFEEQRARHADAVLKKAAALNVLLKDMFWIVQASFVVARLDDSVDWSWWback to top mRNA from alignment at P-wetherbeei_contig1947:985..6051- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1947.1.1 ID=mRNA_P-wetherbeei_contig1947.1.1|Name=mRNA_P-wetherbeei_contig1947.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5067bp|location=Sequence derived from alignment at P-wetherbeei_contig1947:985..6051- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1947:985..6051- >mRNA_P-wetherbeei_contig1947.1.1 ID=mRNA_P-wetherbeei_contig1947.1.1|Name=mRNA_P-wetherbeei_contig1947.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig1947:985..6051- (Phaeothamnion wetherbeei SAG_119_79)back to top |