mRNA_P-wetherbeei_contig19434.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19434.1.1
Unique NamemRNA_P-wetherbeei_contig19434.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19434.1.1 vs. uniprot
Match: A0A1F4CWG6_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CWG6_9PROT)

HSP 1 Score: 546 bits (1406), Expect = 3.600e-190
Identity = 285/365 (78.08%), Postives = 312/365 (85.48%), Query Frame = 1
Query:    7 VSQVLARKWRPKTFAELVGQEHVVRALTNALTQQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGITATPCGKCGACTEIDAGRFVDLIELDAASNTQVDNMRDLLENALYAPTSARFKVYIIDEVHMLSRNAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNLKQIPQGQIREQLKKILALEEVPGDDEALTLLARAAHGSMRDSLSLLDQAIAHGGGKVEQQSVRAMLGSVDQDYLRDILQALQQQDGAALIAVADRMAERSLSFEIALQDLATLLHRIALAQTVPQAIAADDPEHANVMALAAAFGAEEIQLLYQIALNGRQDIGLAPDDYAGFTMALMRMLAFMPGTSGVA 1101
            ++QVLARKWRP+TF+ELVGQEHVV+ALTNAL QQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGIT  PCG+C ACTEIDAGRFVDLIELDAASNTQVDNMR+LLENALYAPTSARFKVYIIDEVHMLSR+AFNAMLKTLEEPP HVKFILATTDPQKIPVTVLSRCLQFNLKQIP+ QI  Q+++IL  E +  D  AL LLARA  GSMRDSLSLLDQAIAHG G+VE  +VRAMLG+VD  YL   L AL  +DGAALIA ADRMA RSLSFE+ALQDL  LLHR+AL Q +P A+A DDP+   ++ LA  F AE++QL YQIAL GR DIGLAPDDYAGFTM L+RMLAF P  S  A
Sbjct:    1 MTQVLARKWRPRTFSELVGQEHVVKALTNALLQQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGITVEPCGECRACTEIDAGRFVDLIELDAASNTQVDNMRELLENALYAPTSARFKVYIIDEVHMLSRSAFNAMLKTLEEPPQHVKFILATTDPQKIPVTVLSRCLQFNLKQIPRPQIEAQMQRILEAEGIAFDQPALALLARAGQGSMRDSLSLLDQAIAHGAGRVEDTAVRAMLGAVDXXYLYXXLGALAARDGAALIAEADRMASRSLSFEMALQDLGVLLHRLALLQMIPGAVAEDDPDRDALVELAGRFSAEDLQLHYQIALQGRNDIGLAPDDYAGFTMTLLRMLAFAPEHSAAA 365          
BLAST of mRNA_P-wetherbeei_contig19434.1.1 vs. uniprot
Match: A0A7C2UIL7_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UIL7_9PROT)

HSP 1 Score: 542 bits (1396), Expect = 1.680e-188
Identity = 287/415 (69.16%), Postives = 332/415 (80.00%), Query Frame = 1
Query:    1 LAVSQVLARKWRPKTFAELVGQEHVVRALTNALTQQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGITATPCGKCGACTEIDAGRFVDLIELDAASNTQVDNMRDLLENALYAPTSARFKVYIIDEVHMLSRNAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNLKQIPQGQIREQLKKILALEEVPGDDEALTLLARAAHGSMRDSLSLLDQAIAHGGGKVEQQSVRAMLGSVDQDYLRDILQALQQQDGAALIAVADRMAERSLSFEIALQDLATLLHRIALAQTVPQAIAADDPEHANVMALAAAFGAEEIQLLYQIALNGRQDIGLAPDDYAGFTMALMRMLAFMPGTSGVAKQGGAAVPARXXXXXXXXXXXSTSSAPDLKKKQFDGD---WNTLINRM 1236
            +AV+Q LARKWRP+TF+ELVGQEHVV+ALTNAL  +RLHHAYLFTGTRGVGKTTLARIIAKALNCE G++A PCG CGACTEIDAGR+VDLIELDAASNTQVD+MR+LLE+ALYAPTS R+KVYIIDEVHMLSR+AFNAMLKTLEEPP HVKF+LATTDPQKIPVTVLSRCLQFNLKQIPQ QIR QL+K+LA E+V  +  AL LLARAA GS+RD+LSLLDQAIAHGGG+VE+ +VRAMLG+VD  YL  +L+AL  +D AALIA A+RMA RSLS E+ALQ+L  LLHR+AL Q VP AIA D+P+   + ALA AF  E++QL YQIAL GR DI LAPD+YAGFTM L+RMLAF P     A   GAA P             + SSAP     + +GD   W  ++  +
Sbjct:    1 MAVTQALARKWRPRTFSELVGQEHVVKALTNALRDRRLHHAYLFTGTRGVGKTTLARIIAKALNCERGVSAEPCGTCGACTEIDAGRYVDLIELDAASNTQVDSMRELLESALYAPTSGRYKVYIIDEVHMLSRSAFNAMLKTLEEPPEHVKFVLATTDPQKIPVTVLSRCLQFNLKQIPQSQIRAQLEKVLAAEQVAFEPAALALLARAAQGSLRDALSLLDQAIAHGGGRVEESAVRAMLGAVDHGYLHAVLRALAARDAAALIAEAERMASRSLSLEMALQELGVLLHRLALLQAVPDAIAEDEPDREPLQALAGAFDPEDLQLYYQIALQGRADIALAPDEYAGFTMTLLRMLAFAPD----AAHAGAARPV----PGTRASPVAESSAPGADNAKKNGDRAEWAAIVEEL 407          
BLAST of mRNA_P-wetherbeei_contig19434.1.1 vs. uniprot
Match: D5CRB6_SIDLE (DNA polymerase III subunit gamma/tau n=2 Tax=Gallionellaceae TaxID=90627 RepID=D5CRB6_SIDLE)

HSP 1 Score: 533 bits (1374), Expect = 6.110e-185
Identity = 282/422 (66.82%), Postives = 329/422 (77.96%), Query Frame = 1
Query:    1 LAVSQVLARKWRPKTFAELVGQEHVVRALTNALTQQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGITATPCGKCGACTEIDAGRFVDLIELDAASNTQVDNMRDLLENALYAPTSARFKVYIIDEVHMLSRNAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNLKQIPQGQIREQLKKILALEEVPGDDEALTLLARAAHGSMRDSLSLLDQAIAHGGGKVEQQSVRAMLGSVDQDYLRDILQALQQQDGAALIAVADRMAERSLSFEIALQDLATLLHRIALAQTVPQAIAADDPEHANVMALAAAFGAEEIQLLYQIALNGRQDIGLAPDDYAGFTMALMRMLAFMP-GTSGVAKQGGA---------AVPARXXXXXXXXXXXSTSSAPDLKKKQFDGDWNTLINRM 1236
            ++ + VLARKWRP+ FA+L GQEHVV+ALTNALTQ RLHHAYLFTGTRGVGKTT+ARI AK+LNCETG+TATPCG CGACTEID+GRFVDLIELDAASNTQVDNMR+LLE+ALYAPTS RFKVYIIDEVHMLS++AFNAMLKTLEEPP HVKFILATTDPQKIPVTVLSRCLQFNLKQ+P   I   L+ +L  E +P +  AL L+ARAA GSMRD+LSLLDQAIA+  GKV++  VR MLG++DQ YL D+LQ L+ +DGA L+ +AD MA RSL+FE ALQDLATLLHRIALAQT+P AIA D+PE A +  LA  F  EEIQL YQIA++GR +I LAPD+YAGFTM L+RMLAF P G    A QG           A PA              S++    +   D DWNTL++++
Sbjct:    1 MSATSVLARKWRPRNFAQLAGQEHVVQALTNALTQNRLHHAYLFTGTRGVGKTTIARIFAKSLNCETGVTATPCGVCGACTEIDSGRFVDLIELDAASNTQVDNMRELLESALYAPTSGRFKVYIIDEVHMLSKSAFNAMLKTLEEPPSHVKFILATTDPQKIPVTVLSRCLQFNLKQLPPALILTHLQYVLGQENIPFEIGALNLVARAAQGSMRDALSLLDQAIAYSSGKVDEALVRTMLGAIDQGYLFDLLQMLRVEDGAGLLRIADDMAMRSLAFEAALQDLATLLHRIALAQTIPNAIAEDEPERARLFELAQQFTPEEIQLNYQIAIHGRNEIDLAPDEYAGFTMTLLRMLAFAPQGAKASAGQGAPKPAPVTVPRAAPAAAEYVAAEPVPAMQSASVRTVESGTDLDWNTLLSQL 422          
BLAST of mRNA_P-wetherbeei_contig19434.1.1 vs. uniprot
Match: A0A1F4D7M4_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4D7M4_9PROT)

HSP 1 Score: 528 bits (1361), Expect = 3.200e-183
Identity = 282/410 (68.78%), Postives = 322/410 (78.54%), Query Frame = 1
Query:    7 VSQVLARKWRPKTFAELVGQEHVVRALTNALTQQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGITATPCGKCGACTEIDAGRFVDLIELDAASNTQVDNMRDLLENALYAPTSARFKVYIIDEVHMLSRNAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNLKQIPQGQIREQLKKILALEEVPGDDEALTLLARAAHGSMRDSLSLLDQAIAHGGGKVEQQSVRAMLGSVDQDYLRDILQALQQQDGAALIAVADRMAERSLSFEIALQDLATLLHRIALAQTVPQAIAADDPEHANVMALAAAFGAEEIQLLYQIALNGRQDIGLAPDDYAGFTMALMRMLAFMPGTSGVAKQGGAAVPARXXXXXXXXXXXSTSSAPDLKKKQFDGDWNTLINRM 1236
            ++QVLARKWRP+ F+ELVGQEHVVRALTNAL  QRLHHAYLFTGTRGVGKTTLARIIAKALNCETG+TA PCGKC ACTEIDAGRFVDL+ELDAASN  +  M  LLE A+YAPT  RFKVYIIDEVH L+ +AFNAMLKTLEEPP HVKFILATT+PQKIPVTVLSRCLQFNLKQIPQ QI+ QL+KIL  E V  +  AL LLARAA GSMRDSLSLLDQAIAHGGG+VE+ +VRAMLG VDQ YL  I++AL  +DGA LIA ADRMA+RSLSFE+ALQ+L  +LHR+AL Q VP A+ ADDP+   +  LA +F AE++QL YQIAL GR DIGLAPDDYAGFTM L+RMLAF P  SG A +   A P R           + +   + KK   +  W  +I ++
Sbjct:    1 MTQVLARKWRPRIFSELVGQEHVVRALTNALQMQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGVTAEPCGKCAACTEIDAGRFVDLLELDAASNRGIAEMTTLLEQAVYAPTIGRFKVYIIDEVHQLTTHAFNAMLKTLEEPPPHVKFILATTEPQKIPVTVLSRCLQFNLKQIPQPQIKAQLQKILDAEGVGFESPALALLARAAQGSMRDSLSLLDQAIAHGGGRVEEAAVRAMLGVVDQTYLYAIMRALAARDGAGLIAEADRMADRSLSFEMALQNLGIMLHRLALLQAVPGAVGADDPDRGMLEELAGSFDAEDLQLYYQIALQGRNDIGLAPDDYAGFTMTLLRMLAFAPEHSGTAAR---AAPGRAAGPLVPV---TPAVLAESKKNDSNAAWGKIIEQL 404          
BLAST of mRNA_P-wetherbeei_contig19434.1.1 vs. uniprot
Match: A0A7S6MGR6_9GAMM (DNA polymerase III subunit gamma/tau n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7S6MGR6_9GAMM)

HSP 1 Score: 527 bits (1357), Expect = 1.950e-182
Identity = 264/361 (73.13%), Postives = 307/361 (85.04%), Query Frame = 1
Query:    1 LAVSQVLARKWRPKTFAELVGQEHVVRALTNALTQQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGITATPCGKCGACTEIDAGRFVDLIELDAASNTQVDNMRDLLENALYAPTSARFKVYIIDEVHMLSRNAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNLKQIPQGQIREQLKKILALEEVPGDDEALTLLARAAHGSMRDSLSLLDQAIAHGGGKVEQQSVRAMLGSVDQDYLRDILQALQQQDGAALIAVADRMAERSLSFEIALQDLATLLHRIALAQTVPQAIAADDPEHANVMALAAAFGAEEIQLLYQIALNGRQDIGLAPDDYAGFTMALMRMLAFMP 1083
            ++ +QVLARKWRP+ F+EL GQEHVVRALTNAL Q RLHHAYLFTGTRGVGKTT+ARI+AK+LNCETG+TA PCG C AC +ID+G F+DLIELDAASNTQVDNMR+LLENALYAPTSARFK+YIIDEVHMLS++AFNAMLKTLEEPP HVKF+LATTDPQKIPVTVLSRCLQFNLKQIP  QI   LK ILA EE+P D  +L L+ARAA GSMRD+LSLLDQAIA G G +E+  VR MLG +DQ YL D+L+AL ++DGA L+++AD M  + LSFE ALQ+LA LLHRIALAQTVPQAI+ D PE+A + ALA     +++QL YQIAL+GR D+ LAPD+YAGFTM L+RML FMP
Sbjct:    1 MSQTQVLARKWRPRNFSELTGQEHVVRALTNALEQNRLHHAYLFTGTRGVGKTTIARILAKSLNCETGVTAAPCGACAACLQIDSGSFIDLIELDAASNTQVDNMRELLENALYAPTSARFKIYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFVLATTDPQKIPVTVLSRCLQFNLKQIPPAQIAGHLKNILAQEEIPSDAVSLQLIARAAQGSMRDALSLLDQAIAFGEGSIEEAGVREMLGIIDQGYLFDLLEALARKDGAQLMSLADEMEAQCLSFEAALQELAALLHRIALAQTVPQAISGDTPEYARIFALAKTLPPDDVQLFYQIALHGRSDLSLAPDEYAGFTMTLLRMLTFMP 361          
BLAST of mRNA_P-wetherbeei_contig19434.1.1 vs. uniprot
Match: A0A2M6XX70_9PROT (DNA polymerase III subunit gamma/tau n=3 Tax=Nitrosomonadales TaxID=32003 RepID=A0A2M6XX70_9PROT)

HSP 1 Score: 526 bits (1354), Expect = 5.570e-182
Identity = 277/419 (66.11%), Postives = 323/419 (77.09%), Query Frame = 1
Query:    1 LAVSQVLARKWRPKTFAELVGQEHVVRALTNALTQQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGITATPCGKCGACTEIDAGRFVDLIELDAASNTQVDNMRDLLENALYAPTSARFKVYIIDEVHMLSRNAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNLKQIPQGQIREQLKKILALEEVPGDDEALTLLARAAHGSMRDSLSLLDQAIAHGGGKVEQQSVRAMLGSVDQDYLRDILQALQQQDGAALIAVADRMAERSLSFEIALQDLATLLHRIALAQTVPQAIAADDPEHANVMALAAAFGAEEIQLLYQIALNGRQDIGLAPDDYAGFTMALMRMLAFMPGTSGVAKQGGAAVP-------ARXXXXXXXXXXXSTSSAPDLKKKQFDGDWNTLINRM 1236
            ++ + VLARKWRP+ FA+L GQEHVVRALTNAL Q RLHHAYLFTGTRGVGKTT+ARI AK+LNCETGITATPCG C ACTEID+GRFVDLIELDAASNTQVDNMR+LLE+ALYAPTS RFKVYIIDEVHMLS++AFNAMLKTLEEPP HVKFILATTDPQKIPVTVLSRCLQFNLKQ+P   I ++L+ +L  E++P +  AL L+ARAA GSMRD LSLLDQAIA+  GKV++  VR MLG++DQ YL D+L  L+  DGA ++ +AD MA RS+ FE ALQD+A+LLHRIALAQTVPQAI  D+PE A ++ LA  F  EEIQL YQIA++GR +I LAPD+YAGFTM L+RMLAF P   G A  GG A         A               S P       D DWN L++++
Sbjct:    1 MSATSVLARKWRPRNFAQLAGQEHVVRALTNALAQNRLHHAYLFTGTRGVGKTTIARIFAKSLNCETGITATPCGVCSACTEIDSGRFVDLIELDAASNTQVDNMRELLESALYAPTSGRFKVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQLPPALIHDRLQYVLEQEQIPFEQGALNLVARAAAGSMRDGLSLLDQAIAYSSGKVDEALVRTMLGAIDQGYLFDLLDTLKAGDGAGMLRIADEMATRSIEFEGALQDMASLLHRIALAQTVPQAIPDDEPERARLLELAQRFTPEEIQLNYQIAIHGRNEIELAPDEYAGFTMTLLRMLAFAP--QGAAASGGPAAARTVSAPVAAAQQKVAEPAQAKPISRPTSPPAGADLDWNALLSQL 417          
BLAST of mRNA_P-wetherbeei_contig19434.1.1 vs. uniprot
Match: A0A6N7B7T9_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Gallionellaceae bacterium TaxID=2052162 RepID=A0A6N7B7T9_9PROT)

HSP 1 Score: 526 bits (1354), Expect = 7.560e-182
Identity = 278/424 (65.57%), Postives = 326/424 (76.89%), Query Frame = 1
Query:    1 LAVSQVLARKWRPKTFAELVGQEHVVRALTNALTQQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGITATPCGKCGACTEIDAGRFVDLIELDAASNTQVDNMRDLLENALYAPTSARFKVYIIDEVHMLSRNAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNLKQIPQGQIREQLKKILALEEVPGDDEALTLLARAAHGSMRDSLSLLDQAIAHGGGKVEQQSVRAMLGSVDQDYLRDILQALQQQDGAALIAVADRMAERSLSFEIALQDLATLLHRIALAQTVPQAIAADDPEHANVMALAAAFGAEEIQLLYQIALNGRQDIGLAPDDYAGFTMALMRMLAFMPGTSGVAKQGGAAVPARXXXXXXXXXXXSTSSAPDLKK----------KQFDG--DWNTLINRM 1236
            ++ + VLARKWRP+ FA+L GQEHVV+ALTNALTQ RLHHAYLFTGTRGVGKTT+ARI AK+LNCETGITATPCG C ACTEID+GRF+DL+ELDAASNTQVDNMR+LLE+ALYAPTS RFKVYIIDEVHMLS++AFNAMLKTLEEPP HVKFILATTDPQKIPVTVLSRCLQFNLKQ+P   I   L+ +L  E +P +  AL L+ARAA GSMRD+LSLLDQAIA+  GKV++  VR MLG++DQ YL D+LQ L+  DGA L+ +AD M  RSL+FE ALQDLATLLHRIALAQT+PQAIA D+PE   ++ALA  F  EEIQL YQI ++GR +I LAPD+YAGFTM L+RMLAF P  +G A +   AV                S A               +Q +G  DWNTL+ ++
Sbjct:    1 MSATSVLARKWRPRNFAQLAGQEHVVQALTNALTQNRLHHAYLFTGTRGVGKTTIARIFAKSLNCETGITATPCGVCSACTEIDSGRFIDLMELDAASNTQVDNMRELLESALYAPTSGRFKVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQLPPALILTHLQYVLGQENIPFEIGALNLVARAAQGSMRDALSLLDQAIAYSSGKVDEALVRTMLGAIDQGYLFDLLQTLRAGDGAGLLRIADDMTMRSLAFEAALQDLATLLHRIALAQTIPQAIAEDEPERERLLALAQQFTPEEIQLNYQIVIHGRNEIDLAPDEYAGFTMTLLRMLAFAPQAAGSAAETRVAVAKATPSPVYAAPRTEPSPAXXXXXXXXXXXXXXMQQANGTLDWNTLLTQL 424          
BLAST of mRNA_P-wetherbeei_contig19434.1.1 vs. uniprot
Match: A0A2H0NJZ3_9PROT (DNA polymerase III subunit gamma/tau n=3 Tax=unclassified Gallionellaceae TaxID=890109 RepID=A0A2H0NJZ3_9PROT)

HSP 1 Score: 525 bits (1353), Expect = 7.630e-182
Identity = 276/413 (66.83%), Postives = 320/413 (77.48%), Query Frame = 1
Query:   10 SQVLARKWRPKTFAELVGQEHVVRALTNALTQQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGITATPCGKCGACTEIDAGRFVDLIELDAASNTQVDNMRDLLENALYAPTSARFKVYIIDEVHMLSRNAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNLKQIPQGQIREQLKKILALEEVPGDDEALTLLARAAHGSMRDSLSLLDQAIAHGGGKVEQQSVRAMLGSVDQDYLRDILQALQQQDGAALIAVADRMAERSLSFEIALQDLATLLHRIALAQTVPQAIAADDPEHANVMALAAAFGAEEIQLLYQIALNGRQDIGLAPDDYAGFTMALMRMLAFMP--GTSGVAKQGGAAVPARXXXXXXXXXXXSTSSAPDLKK--KQFDGDWNTLINRM 1236
            S VLARKWRPK F +L GQEHVVRALTNAL Q RLHHAYLFTGTRGVGKTT+ARI AK+LNCETGITATPCG CGACTEID+GRFVDLIELDAASNTQVDNMR+LLE ALYAPTS RFKVYIIDEVHMLS++AFNAMLKTLEEPP HVKFILATTDPQKIPVTVLSRCLQFNLKQ+P   IR++L+ +L  E +P ++ AL L+ARAA GSMRD LSLLDQAIA+  GKV++  VR MLG++DQ YL D+LQ L   DGA L+ +AD MA RS+  E ALQ+LA+LLHRIALAQTVPQAI  D+PE A +  LA  F  EEIQL YQIA++GR +I LAPD+YAGFTM L+RMLAF P    +  A+        +           +  S P + +     + DWNTL+ ++
Sbjct:    4 SHVLARKWRPKNFQQLTGQEHVVRALTNALAQNRLHHAYLFTGTRGVGKTTIARIFAKSLNCETGITATPCGVCGACTEIDSGRFVDLIELDAASNTQVDNMRELLEGALYAPTSGRFKVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQLPPALIRDRLQYVLEQEAIPFENGALNLVARAARGSMRDGLSLLDQAIAYSSGKVDESLVRTMLGAIDQGYLFDLLQTLHAGDGAGLLCIADEMAMRSIELETALQELASLLHRIALAQTVPQAIPDDEPERARLFELAQQFTPEEIQLDYQIAIHGRNEIELAPDEYAGFTMTLLRMLAFAPQGAAANAARSPAQKTAPKPLPSHGEISVHAAKSEPAVARIPANTELDWNTLLTQL 416          
BLAST of mRNA_P-wetherbeei_contig19434.1.1 vs. uniprot
Match: A0A1G0DXZ4_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Gallionellales bacterium RBG_16_57_15 TaxID=1798250 RepID=A0A1G0DXZ4_9PROT)

HSP 1 Score: 525 bits (1353), Expect = 1.070e-181
Identity = 265/366 (72.40%), Postives = 310/366 (84.70%), Query Frame = 1
Query:    1 LAVSQVLARKWRPKTFAELVGQEHVVRALTNALTQQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGITATPCGKCGACTEIDAGRFVDLIELDAASNTQVDNMRDLLENALYAPTSARFKVYIIDEVHMLSRNAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNLKQIPQGQIREQLKKILALEEVPGDDEALTLLARAAHGSMRDSLSLLDQAIAHGGGKVEQQSVRAMLGSVDQDYLRDILQALQQQDGAALIAVADRMAERSLSFEIALQDLATLLHRIALAQTVPQAIAADDPEHANVMALAAAFGAEEIQLLYQIALNGRQDIGLAPDDYAGFTMALMRMLAFMPGTSGV 1098
            ++ + VLARKWRPK FA+L GQEHVVRAL+NALTQ RLHHAYLFTGTRGVGKTT+ARI AK+LNC TGITATPCG+C AC EID+GRFVDLIELDAASNTQVDNMR+LLE+ALYAPTS RFKVYIIDEVHMLS++AFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNLKQ+P   I   L+ +L  E++  +  A+ L+AR A GSMRD+LSL+DQAIA   GKVE+  VR MLG++DQ YL D+L AL+ QDGAA++ +AD MA RS++F+ ALQ+LATLLHRIALAQTVPQAIA D+PE   ++ LA AF  EE+QL YQIA++GR +I LAPD+YAGFTM L+RMLAF P   G+
Sbjct:    1 MSATTVLARKWRPKNFAQLAGQEHVVRALSNALTQNRLHHAYLFTGTRGVGKTTIARIFAKSLNCLTGITATPCGECSACKEIDSGRFVDLIELDAASNTQVDNMRELLESALYAPTSGRFKVYIIDEVHMLSKSAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNLKQLPPALIAAHLQHVLEQEQISFEPAAINLIARVAQGSMRDALSLMDQAIAFSAGKVEEAVVRTMLGAIDQGYLFDLLAALRGQDGAAVLGIADNMAARSIAFDAALQELATLLHRIALAQTVPQAIADDEPERVRLLELAQAFTPEEVQLFYQIAIHGRDEIDLAPDEYAGFTMTLLRMLAFAPARGGL 366          
BLAST of mRNA_P-wetherbeei_contig19434.1.1 vs. uniprot
Match: A0A5C9BGU6_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Gallionellaceae bacterium TaxID=2052162 RepID=A0A5C9BGU6_9PROT)

HSP 1 Score: 525 bits (1351), Expect = 1.530e-181
Identity = 268/361 (74.24%), Postives = 306/361 (84.76%), Query Frame = 1
Query:    1 LAVSQVLARKWRPKTFAELVGQEHVVRALTNALTQQRLHHAYLFTGTRGVGKTTLARIIAKALNCETGITATPCGKCGACTEIDAGRFVDLIELDAASNTQVDNMRDLLENALYAPTSARFKVYIIDEVHMLSRNAFNAMLKTLEEPPGHVKFILATTDPQKIPVTVLSRCLQFNLKQIPQGQIREQLKKILALEEVPGDDEALTLLARAAHGSMRDSLSLLDQAIAHGGGKVEQQSVRAMLGSVDQDYLRDILQALQQQDGAALIAVADRMAERSLSFEIALQDLATLLHRIALAQTVPQAIAADDPEHANVMALAAAFGAEEIQLLYQIALNGRQDIGLAPDDYAGFTMALMRMLAFMP 1083
            ++ + VLARKWRPKTFA+L GQEHVVRAL NAL Q RLHHAYLFTGTRGVGKTT+ARI AK+LNC +GITATPCG C AC EID+GRFVDLIELDAASNTQVDNMR+LLE+ALYAPTS RFKVYIIDEVHMLS+NAFNAMLKTLEEPP HVKFILATTDPQKIPVTVLSRCLQFNLKQ+P   I  +LK +L  E +P +  AL LLARAA GSMRD+LSLLDQAIA+   +V++ +VR MLG++DQ YL D+LQAL  +DGA L+ +AD MA RSLSFE ALQDLA LLHRIALAQTVPQ IA D+PE   ++ LA  F AE++QL YQIA++GR +I LAPD+YAGFTM L+RMLAFMP
Sbjct:    1 MSATSVLARKWRPKTFAQLAGQEHVVRALGNALAQNRLHHAYLFTGTRGVGKTTIARIFAKSLNCASGITATPCGACSACAEIDSGRFVDLIELDAASNTQVDNMRELLESALYAPTSGRFKVYIIDEVHMLSKNAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQLPPALILSRLKYVLEQENIPFETGALALLARAAAGSMRDALSLLDQAIAYSDARVDEATVRNMLGAIDQGYLFDLLQALLAKDGAGLLRIADDMALRSLSFEAALQDLAILLHRIALAQTVPQGIAEDEPERERLLGLAQQFSAEDVQLYYQIAVHGRDEIDLAPDEYAGFTMTLLRMLAFMP 361          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19434.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4CWG6_9PROT3.600e-19078.08DNA polymerase III subunit gamma/tau n=1 Tax=Betap... [more]
A0A7C2UIL7_9PROT1.680e-18869.16DNA polymerase III subunit gamma/tau n=1 Tax=Betap... [more]
D5CRB6_SIDLE6.110e-18566.82DNA polymerase III subunit gamma/tau n=2 Tax=Galli... [more]
A0A1F4D7M4_9PROT3.200e-18368.78DNA polymerase III subunit gamma/tau n=1 Tax=Betap... [more]
A0A7S6MGR6_9GAMM1.950e-18273.13DNA polymerase III subunit gamma/tau n=1 Tax=Gamma... [more]
A0A2M6XX70_9PROT5.570e-18266.11DNA polymerase III subunit gamma/tau n=3 Tax=Nitro... [more]
A0A6N7B7T9_9PROT7.560e-18265.57DNA polymerase III subunit gamma/tau n=1 Tax=Galli... [more]
A0A2H0NJZ3_9PROT7.630e-18266.83DNA polymerase III subunit gamma/tau n=3 Tax=uncla... [more]
A0A1G0DXZ4_9PROT1.070e-18172.40DNA polymerase III subunit gamma/tau n=1 Tax=Galli... [more]
A0A5C9BGU6_9PROT1.530e-18174.24DNA polymerase III subunit gamma/tau n=1 Tax=Galli... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19434contigP-wetherbeei_contig19434:50..1285 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog580332.Slit_1265
Preferred namednaX
PFAMsDNA_pol3_delta2,DNA_pol3_gamma3,DNA_pol3_tau_5
Model size1236
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC02795
KEGG koko:K02343
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440
KEGG ModuleM00260
Hectar predicted targeting categorymitochondrion
Exons1
Evalue1e-185
EggNOG OGsCOG2812@1|root,COG2812@2|Bacteria,1MVCK@1224|Proteobacteria,2VIE0@28216|Betaproteobacteria,44V5X@713636|Nitrosomonadales
EC2.7.7.7
DescriptionDNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Cds size1236
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186172.236125-CDS-P-wetherbeei_contig19434:49..12851683186172.236125-CDS-P-wetherbeei_contig19434:49..1285Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19434 50..1285 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19434.1.1prot_P-wetherbeei_contig19434.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19434 50..1285 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19434.1.1

>prot_P-wetherbeei_contig19434.1.1 ID=prot_P-wetherbeei_contig19434.1.1|Name=mRNA_P-wetherbeei_contig19434.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=412bp
LAVSQVLARKWRPKTFAELVGQEHVVRALTNALTQQRLHHAYLFTGTRGV
GKTTLARIIAKALNCETGITATPCGKCGACTEIDAGRFVDLIELDAASNT
QVDNMRDLLENALYAPTSARFKVYIIDEVHMLSRNAFNAMLKTLEEPPGH
VKFILATTDPQKIPVTVLSRCLQFNLKQIPQGQIREQLKKILALEEVPGD
DEALTLLARAAHGSMRDSLSLLDQAIAHGGGKVEQQSVRAMLGSVDQDYL
RDILQALQQQDGAALIAVADRMAERSLSFEIALQDLATLLHRIALAQTVP
QAIAADDPEHANVMALAAAFGAEEIQLLYQIALNGRQDIGLAPDDYAGFT
MALMRMLAFMPGTSGVAKQGGAAVPARAPAPASAPAGASTSSAPDLKKKQ
FDGDWNTLINRM
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mRNA from alignment at P-wetherbeei_contig19434:50..1285+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19434.1.1 ID=mRNA_P-wetherbeei_contig19434.1.1|Name=mRNA_P-wetherbeei_contig19434.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1236bp|location=Sequence derived from alignment at P-wetherbeei_contig19434:50..1285+ (Phaeothamnion wetherbeei SAG_119_79)
CTAGCAGTGAGCCAGGTTCTCGCCCGCAAGTGGCGCCCCAAGACCTTTGC CGAACTGGTCGGCCAGGAACACGTCGTAAGAGCGCTGACCAACGCGCTCA CGCAGCAGCGCCTGCATCACGCCTATCTCTTTACCGGCACGCGCGGCGTC GGCAAAACGACGCTGGCGCGCATCATCGCCAAGGCGCTCAATTGCGAAAC CGGCATTACGGCGACACCCTGCGGCAAATGCGGCGCCTGCACTGAAATCG ACGCCGGCCGTTTTGTCGACCTGATAGAACTCGATGCCGCGTCCAATACC CAGGTCGACAACATGCGCGACCTGCTGGAGAACGCGCTGTACGCGCCGAC CAGCGCCCGCTTCAAGGTCTACATCATCGACGAAGTGCACATGCTTTCGC GCAACGCGTTCAACGCGATGCTTAAAACGCTCGAAGAGCCGCCGGGCCAC GTCAAATTCATTCTCGCCACCACCGATCCGCAGAAAATCCCGGTCACCGT CTTATCACGCTGCCTGCAGTTCAACCTGAAGCAGATCCCGCAGGGGCAGA TCAGGGAGCAGCTCAAGAAAATACTCGCGCTGGAAGAAGTGCCAGGCGAC GACGAGGCTTTGACGCTCCTGGCGCGCGCCGCCCACGGCAGCATGCGCGA CAGCCTCTCCCTGCTTGACCAGGCGATTGCGCATGGCGGCGGCAAAGTCG AGCAGCAGTCGGTGCGCGCCATGCTGGGCAGTGTCGATCAGGATTACCTG CGCGATATCCTGCAGGCGCTGCAGCAGCAGGATGGCGCGGCCTTGATTGC CGTCGCCGACCGCATGGCGGAACGCAGCCTGTCGTTCGAAATCGCGCTGC AAGACCTGGCCACGCTGTTGCACCGCATCGCGCTCGCGCAGACCGTGCCG CAGGCGATCGCTGCGGACGATCCCGAGCACGCCAACGTCATGGCGCTGGC CGCTGCGTTCGGCGCCGAAGAAATCCAGTTGCTGTATCAAATTGCACTCA ATGGTCGCCAGGACATTGGGCTCGCGCCCGATGACTACGCCGGCTTCACG ATGGCCCTCATGCGCATGCTTGCATTCATGCCCGGCACCAGCGGCGTGGC TAAGCAGGGCGGTGCTGCCGTCCCCGCGCGCGCACCGGCACCGGCATCGG CACCTGCAGGTGCCTCAACGTCGTCCGCGCCCGATTTAAAAAAAAAGCAG TTTGACGGCGACTGGAATACGTTGATCAATCGCATG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19434:50..1285+

>mRNA_P-wetherbeei_contig19434.1.1 ID=mRNA_P-wetherbeei_contig19434.1.1|Name=mRNA_P-wetherbeei_contig19434.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1236bp|location=Sequence derived from alignment at P-wetherbeei_contig19434:50..1285+ (Phaeothamnion wetherbeei SAG_119_79)
CTAGCAGTGAGCCAGGTTCTCGCCCGCAAGTGGCGCCCCAAGACCTTTGC
CGAACTGGTCGGCCAGGAACACGTCGTAAGAGCGCTGACCAACGCGCTCA
CGCAGCAGCGCCTGCATCACGCCTATCTCTTTACCGGCACGCGCGGCGTC
GGCAAAACGACGCTGGCGCGCATCATCGCCAAGGCGCTCAATTGCGAAAC
CGGCATTACGGCGACACCCTGCGGCAAATGCGGCGCCTGCACTGAAATCG
ACGCCGGCCGTTTTGTCGACCTGATAGAACTCGATGCCGCGTCCAATACC
CAGGTCGACAACATGCGCGACCTGCTGGAGAACGCGCTGTACGCGCCGAC
CAGCGCCCGCTTCAAGGTCTACATCATCGACGAAGTGCACATGCTTTCGC
GCAACGCGTTCAACGCGATGCTTAAAACGCTCGAAGAGCCGCCGGGCCAC
GTCAAATTCATTCTCGCCACCACCGATCCGCAGAAAATCCCGGTCACCGT
CTTATCACGCTGCCTGCAGTTCAACCTGAAGCAGATCCCGCAGGGGCAGA
TCAGGGAGCAGCTCAAGAAAATACTCGCGCTGGAAGAAGTGCCAGGCGAC
GACGAGGCTTTGACGCTCCTGGCGCGCGCCGCCCACGGCAGCATGCGCGA
CAGCCTCTCCCTGCTTGACCAGGCGATTGCGCATGGCGGCGGCAAAGTCG
AGCAGCAGTCGGTGCGCGCCATGCTGGGCAGTGTCGATCAGGATTACCTG
CGCGATATCCTGCAGGCGCTGCAGCAGCAGGATGGCGCGGCCTTGATTGC
CGTCGCCGACCGCATGGCGGAACGCAGCCTGTCGTTCGAAATCGCGCTGC
AAGACCTGGCCACGCTGTTGCACCGCATCGCGCTCGCGCAGACCGTGCCG
CAGGCGATCGCTGCGGACGATCCCGAGCACGCCAACGTCATGGCGCTGGC
CGCTGCGTTCGGCGCCGAAGAAATCCAGTTGCTGTATCAAATTGCACTCA
ATGGTCGCCAGGACATTGGGCTCGCGCCCGATGACTACGCCGGCTTCACG
ATGGCCCTCATGCGCATGCTTGCATTCATGCCCGGCACCAGCGGCGTGGC
TAAGCAGGGCGGTGCTGCCGTCCCCGCGCGCGCACCGGCACCGGCATCGG
CACCTGCAGGTGCCTCAACGTCGTCCGCGCCCGATTTAAAAAAAAAGCAG
TTTGACGGCGACTGGAATACGTTGATCAATCGCATG
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