mRNA_P-wetherbeei_contig19418.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19418.1.1 vs. uniprot
Match: D8LR71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR71_ECTSI) HSP 1 Score: 184 bits (466), Expect = 3.140e-50 Identity = 94/157 (59.87%), Postives = 116/157 (73.89%), Query Frame = 1
Query: 160 SRTEALGYFRAAEEAFRRCDAQYLKAVDNYAYLCLDTVWLLFLTRDMKRLPLAERLLAAAKDGFRRSHGAGLERLMALKGEHCAERALYVRLHLLDGVVAFLQGRSGDASALLIRAQHECRALSVRPELVRQLMQESAIVWRMPIDHKLATRTEKRG 630
++ E LG A+EAFRRCD +YL+AVDNYAYLCLD VWLLFL +DMK + LA R+LAA + GFR++HG GL+RL ALKGEHCAE+ LYVRLHLL GVVAFL+G SG+ASALL+RA E +AL P L +LMQ+ V + K+A R + G
Sbjct: 428 AQREGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDIVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQGVVAFLRGDSGEASALLLRASGEAKALKPNPALACRLMQKWHTVRLEVLQPKVALRALRAG 584
BLAST of mRNA_P-wetherbeei_contig19418.1.1 vs. uniprot
Match: A0A6H5KPY6_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY6_9PHAE) HSP 1 Score: 183 bits (464), Expect = 4.030e-50 Identity = 94/157 (59.87%), Postives = 115/157 (73.25%), Query Frame = 1
Query: 160 SRTEALGYFRAAEEAFRRCDAQYLKAVDNYAYLCLDTVWLLFLTRDMKRLPLAERLLAAAKDGFRRSHGAGLERLMALKGEHCAERALYVRLHLLDGVVAFLQGRSGDASALLIRAQHECRALSVRPELVRQLMQESAIVWRMPIDHKLATRTEKRG 630
++ E LG A+EAFRRCD +YL+AVDNYAYLCLD VWLLFL +DMK + LA R+LAA + GFR++HG GL+RL ALKGEHCAE+ LYVRLHLL GVVAFL+G SG ASALL+RA E +AL P L +LMQ+ V + K+A R + G
Sbjct: 364 AQREGLGLLMRADEAFRRCDPKYLEAVDNYAYLCLDVVWLLFLMKDMKNIDLASRMLAAVEKGFRKAHGEGLQRLTALKGEHCAEKLLYVRLHLLQGVVAFLRGDSGKASALLLRASGEAKALKPNPALACRLMQKWHTVRLEVLQPKVALRALRAG 520
BLAST of mRNA_P-wetherbeei_contig19418.1.1 vs. uniprot
Match: A0A2K1KV21_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KV21_PHYPA) HSP 1 Score: 123 bits (309), Expect = 3.380e-29 Identity = 66/132 (50.00%), Postives = 86/132 (65.15%), Query Frame = 1
Query: 169 EALGYFRAAEEAFRRCDAQYLKAVDNYAYLCLDTVWLLFLTRDMKRLPLAERLLAAAKDGFRRSHGAGLERLMALKGEHCAERALYVRLHLLDGVVAFLQGRSGDASALLIRAQHECRALSVRPELVRQLMQ 564
EAL +EE+F CD ++L+AVDN A L +DTVW LF+ RD++RL +A LA A+DG +RSHG LERL L+G C E ALYVRL LL+GVVA+ G++ A A L+ AQ + L + E V L Q
Sbjct: 183 EALEVLGMSEESFSLCDRKFLEAVDNVALLQIDTVWCLFMLRDIERLSVARERLARARDGLKRSHGPNLERLRVLQGGFCPELALYVRLELLEGVVAYHSGQTDAARASLLSAQEKFEQLQISDEQVAALAQ 314
BLAST of mRNA_P-wetherbeei_contig19418.1.1 vs. uniprot
Match: A0A835Z994_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z994_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.300e-29 Identity = 59/104 (56.73%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 160 SRTEALGYFRAAEEAFRRCDAQYLKAVDNYAYLCLDTVWLLFLTRDMKRLPLAERLLAAAKDGFRRSHGAGLERLMALKGEHCAERALYVRLHLLDGVVAFLQG 471
+R EAL Y A+ +FR C +Y + VDN+A++CLD WLLFLTRD+ L LL A +GF RSHG L RL ALKG+HC E ALY RLHLL GVVA+L G
Sbjct: 196 ARAEALQYLLEADTSFRSCSEEYRRHVDNHAHVCLDAAWLLFLTRDLSNLQQTSALLTCAAEGFARSHGQDLNRLRALKGDHCPEVALYARLHLLQGVVAYLAG 299
BLAST of mRNA_P-wetherbeei_contig19418.1.1 vs. uniprot
Match: A0A2R6WEG5_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WEG5_MARPO) HSP 1 Score: 115 bits (289), Expect = 1.890e-26 Identity = 64/131 (48.85%), Postives = 81/131 (61.83%), Query Frame = 1
Query: 166 TEALGYFRAAEEAFRRCDAQYLKAVDNYAYLCLDTVWLLFLTRDMKRLPLAERLLAAAKDGFRRSHGAGLERLMALKGEHCAERALYVRLHLLDGVVAFLQGRSGDASALLIRAQHECRALSVRPELVRQL 558
TEAL +EE+F CD + L+AVDN A L LDTVW F+ RD+ L +A L+ +++G RSHG LERL L+G C E A+YVRL LL+GVVA+ GRS A L AQ + + L V E V QL
Sbjct: 173 TEALEVLSMSEESFSLCDRKILEAVDNVALLHLDTVWCFFMLRDLALLAVARERLSMSREGLSRSHGRNLERLRVLQGGFCPELAVYVRLELLEGVVAYHSGRSEAARQSLTSAQQKFQQLQVSDEAVAQL 303
BLAST of mRNA_P-wetherbeei_contig19418.1.1 vs. uniprot
Match: UPI0018D82358 (NEDD8 ultimate buster 1-like isoform X1 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D82358) HSP 1 Score: 112 bits (280), Expect = 3.900e-25 Identity = 61/131 (46.56%), Postives = 84/131 (64.12%), Query Frame = 1
Query: 169 EALGYFRAAEEAFRRCDAQYLKAVDNYAYLCLDTVWLLFLTRDMKRLPLAERLLAAAKDGFRRSHGAGLERLMALKGEHCAERALYVRLHLLDGVVAFLQGRSGDASALLIRAQHECRALSVRPELVRQLM 561
EAL AE+AF +C ++ L AVDNYA LCLD VW +++ LP AE L +DGFRRS+G L+RL +LKG+ E ALYVRL+LL G++AF QGR A +LL +A++ L V + + Q++
Sbjct: 253 EALLILLEAEKAFSQCRSEILTAVDNYALLCLDIVWCYLCLQNVSELPDAEAKLKICEDGFRRSYGDNLQRLASLKGDSPTELALYVRLYLLQGIMAFYQGRMDVARSLLQKAENTRATLQVDEDKLMQVV 383
BLAST of mRNA_P-wetherbeei_contig19418.1.1 vs. uniprot
Match: K1REI0_CRAGI (NEDD8 ultimate buster 1 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1REI0_CRAGI) HSP 1 Score: 111 bits (278), Expect = 4.620e-25 Identity = 58/132 (43.94%), Postives = 86/132 (65.15%), Query Frame = 1
Query: 166 TEALGYFRAAEEAFRRCDAQYLKAVDNYAYLCLDTVWLLFLTRDMKRLPLAERLLAAAKDGFRRSHGAGLERLMALKGEHCAERALYVRLHLLDGVVAFLQGRSGDASALLIRAQHECRALSVRPELVRQLM 561
T+AL A++ FR+C A L AVDNYA LCLD VW ++++ LP A++ L +++D F RS+GA LERL A+KGE + ALY++LHLL G+VAF R +A+ LL +A+ + + L + + Q+M
Sbjct: 141 TKALLLLLEADKEFRKCGANILSAVDNYAVLCLDIVWCYLCLQNIEELPDADQRLRSSEDCFVRSYGANLERLAAVKGESGTQLALYMKLHLLQGIVAFHHHRITEANVLLRKAEEDLKRLQIDENQLSQMM 272
BLAST of mRNA_P-wetherbeei_contig19418.1.1 vs. uniprot
Match: A0A8B7Z095_ACAPL (NEDD8 ultimate buster 1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z095_ACAPL) HSP 1 Score: 110 bits (276), Expect = 1.330e-24 Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 1
Query: 169 EALGYFRAAEEAFRRCDAQYLKAVDNYAYLCLDTVWLLFLTRDMKRLPLAERLLAAAKDGFRRSHGAGLERLMALKGEHCAERALYVRLHLLDGVVAFLQGRSGDASALLIRAQHECRALSVRPELVRQLM 561
EAL A++AF +C ++ L AVDNYA LCLD VW +++ LP AE L ++ FRRS+G L+RL +LKGE E ALYVRL+LL G++AF QGR A ALL +A+ +L V + + Q+M
Sbjct: 253 EALLILLEADKAFSQCRSEILNAVDNYAVLCLDIVWCYLCLQNVSELPDAEAKLRTCEECFRRSYGDNLQRLASLKGESTRELALYVRLYLLQGILAFYQGRLDAAQALLQKAEGILASLQVDEDKLMQVM 383
BLAST of mRNA_P-wetherbeei_contig19418.1.1 vs. uniprot
Match: UPI001651EEA5 (NEDD8 ultimate buster 1 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI001651EEA5) HSP 1 Score: 110 bits (275), Expect = 1.820e-24 Identity = 60/132 (45.45%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 166 TEALGYFRAAEEAFRRCDAQYLKAVDNYAYLCLDTVWLLFLTRDMKRLPLAERLLAAAKDGFRRSHGAGLERLMALKGEHCAERALYVRLHLLDGVVAFLQGRSGDASALLIRAQHECRALSVRPELVRQLM 561
T AL A+E F +C A+ LK VDNYA LCLD VW FL +++++LP AE L +++ F+ S+G +ERL A+KG E+AL++RL+LL G+VAF QG+ A LL RAQ L V P+ + ++M
Sbjct: 244 TLALPLLLEADEEFSKCRAEILKTVDNYAILCLDVVWCYFLLKNLEQLPDAESRLHKSEECFKLSYGEQMERLTAIKGGTGTEQALFMRLYLLQGIVAFHQGQLSQARNLLGRAQFVLSLLHVDPDKLNEVM 375
BLAST of mRNA_P-wetherbeei_contig19418.1.1 vs. uniprot
Match: A0A1A9WA10_9MUSC (Uncharacterized protein n=1 Tax=Glossina brevipalpis TaxID=37001 RepID=A0A1A9WA10_9MUSC) HSP 1 Score: 108 bits (271), Expect = 6.120e-24 Identity = 59/132 (44.70%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 169 EALGYFRAAEEAFRRCDAQYLKAVDNYAYLCLDTVWLLFLTRDMKRLPLAERLLAAAKDGFRRSHGAGLERLMALKGEHCAERALYVRLHLLDGVVAFLQGRSGDASALLIRAQHECRALSVRPELVRQLMQ 564
EAL A+E F C++++L+AVDNYA L LD VW +++ +LP A+R L ++ FRRS+G L+RL+ LKGE CAE+AL +RLHLL GVV F Q + +AS A++E AL V + + L++
Sbjct: 237 EALILLLEADEKFTACNSKFLEAVDNYALLNLDIVWCYLCLKNVTQLPDAQRRLDICENNFRRSYGENLQRLINLKGEGCAEKALIMRLHLLQGVVLFHQNQHNEASEKFEIAENELLALKVDDKSIETLVE 368 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19418.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19418.1.1 >prot_P-wetherbeei_contig19418.1.1 ID=prot_P-wetherbeei_contig19418.1.1|Name=mRNA_P-wetherbeei_contig19418.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=210bp GGAAAAAVGSAAAAAAGNSATGSAVGASSGWAAAASAASTAPAAAVLSTEback to top mRNA from alignment at P-wetherbeei_contig19418:13..1019- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19418.1.1 ID=mRNA_P-wetherbeei_contig19418.1.1|Name=mRNA_P-wetherbeei_contig19418.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1007bp|location=Sequence derived from alignment at P-wetherbeei_contig19418:13..1019- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19418:13..1019- >mRNA_P-wetherbeei_contig19418.1.1 ID=mRNA_P-wetherbeei_contig19418.1.1|Name=mRNA_P-wetherbeei_contig19418.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=630bp|location=Sequence derived from alignment at P-wetherbeei_contig19418:13..1019- (Phaeothamnion wetherbeei SAG_119_79)back to top |