mRNA_P-wetherbeei_contig19417.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19417.1.1 vs. uniprot
Match: A0A835YU62_9STRA (Tocopherol polyprenyltransferase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU62_9STRA) HSP 1 Score: 104 bits (260), Expect = 4.090e-25 Identity = 56/94 (59.57%), Postives = 66/94 (70.21%), Query Frame = 1
Query: 1 YNIRTLASRVGVQKAAAGASVVLVLNYISAVAEAAMAPAAAFNRRVMTVGHGLFLAYLWRSFAALRAGEKESVKAFYARIWDLFYAEYLLYPFI 282
YNI T A R GV + A A +VL LNY+SA+ EAA+ PA FN+ +M GH F YL+R+ L+ KESVKAFYARIWDLFY EYLLYPFI
Sbjct: 226 YNISTFAVRAGVARIANAACIVLGLNYVSAIVEAALVPA--FNKAIMIAGHSAFALYLYRARTKLQPDSKESVKAFYARIWDLFYLEYLLYPFI 317
BLAST of mRNA_P-wetherbeei_contig19417.1.1 vs. uniprot
Match: A0A7S3XLT2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLT2_HETAK) HSP 1 Score: 95.1 bits (235), Expect = 1.680e-21 Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 1
Query: 1 YNIRTLASRVGVQKAAAGASVVLVLNYISAVAEAAMAPAAAFNRRVMTVGHGLFLAYLWRSFAALRAGEKESVKAFYARIWDLFYAEYLLYPFI 282
Y + T A+R+GV+K A +S+VL NY+SAV AA APA F + VM V H LF YL++S+ L A S+K FY RIWDLFYA+Y +YPFI
Sbjct: 218 YGVSTFATRLGVRKVAKYSSLVLGANYVSAVLNAAFAPAHHFRKPVMVVAHTLFAGYLFKSYKELDAESTASIKQFYGRIWDLFYAQYCIYPFI 311
BLAST of mRNA_P-wetherbeei_contig19417.1.1 vs. uniprot
Match: D7FLG8_ECTSI (Transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG8_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 1.780e-20 Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 1 YNIRTLASRVGVQKAAAGASVVLVLNYISAVAEAAMAPAAAFNRRVMTVGHGLFLAYLWRSFAALRAGEKESVKAFYARIWDLFYAEYLLYPFI 282
YNI T AS+ GV+ A AS +L +NY+SA+AE ++PA FNRRVM GH LA L + L ++ S+K FY RIWDLFY EY +YPF+
Sbjct: 196 YNISTFASKRGVKFTARAASAILAVNYLSAIAEGILSPAGTFNRRVMVGGHSALLAILGLAIRRLVPDDQGSIKRFYLRIWDLFYLEYAMYPFM 289
BLAST of mRNA_P-wetherbeei_contig19417.1.1 vs. uniprot
Match: A0A6H5JNV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV9_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 6.660e-20 Identity = 49/94 (52.13%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 1 YNIRTLASRVGVQKAAAGASVVLVLNYISAVAEAAMAPAAAFNRRVMTVGHGLFLAYLWRSFAALRAGEKESVKAFYARIWDLFYAEYLLYPFI 282
Y I T AS+ GV+ A AS VL +NY+SA+AE A++PA FNRRVM GH LA L + L ++ S+K FY RIWDLFY EY +YPF+
Sbjct: 320 YKISTFASKRGVKFTARAASAVLAVNYLSAIAEGALSPAGTFNRRVMVGGHSALLAILGLAIRKLVPDDQGSIKRFYLRIWDLFYLEYAMYPFM 413
BLAST of mRNA_P-wetherbeei_contig19417.1.1 vs. uniprot
Match: H6WB95_VAULI (Tocopherol polyprenyltransferase-like protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB95_VAULI) HSP 1 Score: 90.5 bits (223), Expect = 2.360e-19 Identity = 54/94 (57.45%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 1 YNIRTLASRVGVQKAAAGASVVLVLNYISAVAEAAMAPAAAFNRRVMTVGHGLFLAYLWRSFAALRAGEKESVKAFYARIWDLFYAEYLLYPFI 282
+NI T A R G +K A VL +NY SAV EA P FNR VM GH LF AYL R+ A AG+KES K+FYA+IW+LFY EYLLYPFI
Sbjct: 318 FNINTWAVRAGSEKVANVGCAVLGVNYASAVVEAVTCPG--FNRGVMVGGHCLFGAYLLRARAMFVAGQKESSKSFYAKIWNLFYMEYLLYPFI 409
BLAST of mRNA_P-wetherbeei_contig19417.1.1 vs. uniprot
Match: W7TS50_9STRA (Tocopherol polyprenyltransferase-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS50_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 5.970e-19 Identity = 47/94 (50.00%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 1 YNIRTLASRVGVQKAAAGASVVLVLNYISAVAEAAMAPAAAFNRRVMTVGHGLFLAYLWRSFAALRAGEKESVKAFYARIWDLFYAEYLLYPFI 282
YN+RT A+RVGV+ A GA+ VL LNY+SA+A+ + P+ AF + VM GH + A L + + L S+KAFY IWDLFY EY LYPF+
Sbjct: 309 YNVRTFATRVGVKNMARGAAGVLFLNYLSAIAQGVVNPSGAFRQWVMVGGHTVLAALLIQRYKKLEPDSLASIKAFYKSIWDLFYLEYALYPFL 402
BLAST of mRNA_P-wetherbeei_contig19417.1.1 vs. uniprot
Match: A0A7S2UTD4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTD4_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.730e-18 Identity = 50/94 (53.19%), Postives = 58/94 (61.70%), Query Frame = 1
Query: 1 YNIRTLASRVGVQKAAAGASVVLVLNYISAVAEAAMAPAAAFNRRVMTVGHGLFLAYLWRSFAALRAGEKESVKAFYARIWDLFYAEYLLYPFI 282
YNI TL R GV A A+ VL+ NYISA+ +APA FN+ VM GH LF +L + + L A SVK FY IWDLFYAEY LYPFI
Sbjct: 294 YNINTLTVRKGVPAVAKLATGVLLANYISAIVNGIVAPAQQFNKVVMVSGHALFSVWLIKLYKDLNASSTTSVKKFYKGIWDLFYAEYCLYPFI 387
BLAST of mRNA_P-wetherbeei_contig19417.1.1 vs. uniprot
Match: A0A7S0AKR4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AKR4_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.180e-14 Identity = 45/94 (47.87%), Postives = 55/94 (58.51%), Query Frame = 1
Query: 1 YNIRTLASRVGVQKAAAGASVVLVLNYISAVAEAAMAPAAAFNRRVMTVGHGLFLAYLWRSFAALRAGEKESVKAFYARIWDLFYAEYLLYPFI 282
YNI TLA++VG+ K A GA+V L+LNYISA+ + +A FN+ M GH L F L A SVK +Y IWD FY EYLLY I
Sbjct: 201 YNIETLATKVGIPKIAKGATVCLLLNYISAIGQGLLATPGTFNKIPMIGGHLALATMLLVRFRKLDADSIPSVKLYYKHIWDNFYLEYLLYTLI 294
BLAST of mRNA_P-wetherbeei_contig19417.1.1 vs. uniprot
Match: A0A7S2TSF5_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TSF5_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 4.420e-14 Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 1
Query: 1 YNIRTLASRVGVQKAAAGASVVLVLNYISAVAEAAMAPAAAFNRRVMTVGHGLFLAYLWRSFAALRAGEKESVKAFYARIWDLFYAEYLLYPFI 282
+ ++T ASR+G +K A A + L NY+ A+ A + FN +M H L R+ L ++ S+K FYARIWDLFY EY LYPF+
Sbjct: 11 FGVKTFASRLGAKKVALMACLTLGANYVHAIGTALFSQPGTFNTPLMVGAHAALALMLARNHKKLDPDDQTSIKRFYARIWDLFYLEYALYPFL 104
BLAST of mRNA_P-wetherbeei_contig19417.1.1 vs. uniprot
Match: B8CAB5_THAPS (Tocopherol polyprenyltransferase-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAB5_THAPS) HSP 1 Score: 72.8 bits (177), Expect = 3.250e-13 Identity = 41/94 (43.62%), Postives = 52/94 (55.32%), Query Frame = 1
Query: 1 YNIRTLASRVGVQKAAAGASVVLVLNYISAVAEAAMAPAAAFNRRVMTVGHGLFLAYLWRSFAALRAGEKESVKAFYARIWDLFYAEYLLYPFI 282
YNI T A+++GV K A GA++ L LNYI A+ ++ A F M GH A L F L S+K +Y IWDLFYAEY+LY I
Sbjct: 204 YNISTFATKIGVPKIAKGATLCLFLNYIHAILTGVLSKAGTFRALPMIGGHAALAALLLTRFKELDPESMPSIKKYYKHIWDLFYAEYVLYTLI 297 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19417.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19417.1.1 >prot_P-wetherbeei_contig19417.1.1 ID=prot_P-wetherbeei_contig19417.1.1|Name=mRNA_P-wetherbeei_contig19417.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp YNIRTLASRVGVQKAAAGASVVLVLNYISAVAEAAMAPAAAFNRRVMTVGback to top mRNA from alignment at P-wetherbeei_contig19417:263..547+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19417.1.1 ID=mRNA_P-wetherbeei_contig19417.1.1|Name=mRNA_P-wetherbeei_contig19417.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig19417:263..547+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19417:263..547+ >mRNA_P-wetherbeei_contig19417.1.1 ID=mRNA_P-wetherbeei_contig19417.1.1|Name=mRNA_P-wetherbeei_contig19417.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig19417:263..547+ (Phaeothamnion wetherbeei SAG_119_79)back to top |