mRNA_P-wetherbeei_contig19412.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19412.1.1 vs. uniprot
Match: UPI0019C3BD79 (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI0019C3BD79) HSP 1 Score: 705 bits (1820), Expect = 5.490e-253 Identity = 363/429 (84.62%), Postives = 391/429 (91.14%), Query Frame = 1
Query: 1 IEKMQGIRGDIPVIVQTAQGSIETVIKAMRAGADDFVVKPVSPERLKISIQNLLKVNALTEEVKRLNKKVGGSLSFGDLIASSPAMANVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESERAGRPFVAVNCGAIPENLVESILFGHEKGSFTGATSRHSGKFLEADGGTLFLDEVAELPLDMQVKLLRAIQEGEIDPVGSRKSVKVNIRLISATNRNMIEMVKAGQFREDLYYRLNVYPMMVPPLRDRKDDIPALVEHFITRLSAEEGRKVRGITPNVLPMLQAYGWPGNVRQLENTIFRAIVLCESDVLEIQDFPQIASLVEGYEIIVPPAMPLAKKPAAPAGPAMTGGNQHVSRSAGHQVSDGMALGIPAVTDGGHIRKLEEVEADMIRLALNRYRGQMSEVARKLGIGRSTLYRKMRDLGL 1287
+E++Q IRGD+PVIVQTAQGSIETVIKAMRAGADDFVVKP+SPERLK+SIQNLLKV ALTEEVKRLNKKVGG+L+F DLIA+SPAMANVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESER G+PFVAVNCGAIPENLVESILFGHEKGSFTGAT +H GKF EADGGTLFLDEVAELP DMQVKLLRAIQEGEIDPVGSRKSVKVNIRL+SATNRNMIEMVK GQFREDLYYRLNVYP+MVPPLRDRK+DIPALV+HFITR +AEEGRKVRGI P+ L +L+ Y WPGNVRQLENT+FRAIVLCE D LEIQDFPQIA+LVEGYEI +P A KP+ P G A G V+ SAG VSDGMALGIP VT GGH+RKLEEVEADMIRLAL+RYRGQMSEVARKLGIGRSTLYRKM+D+GL
Sbjct: 68 LERLQAIRGDLPVIVQTAQGSIETVIKAMRAGADDFVVKPISPERLKVSIQNLLKVTALTEEVKRLNKKVGGALTFDDLIAASPAMANVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESERLGKPFVAVNCGAIPENLVESILFGHEKGSFTGATGKHLGKFQEADGGTLFLDEVAELPFDMQVKLLRAIQEGEIDPVGSRKSVKVNIRLVSATNRNMIEMVKKGQFREDLYYRLNVYPIMVPPLRDRKEDIPALVDHFITRFAAEEGRKVRGIDPHALGLLRGYSWPGNVRQLENTVFRAIVLCEGDRLEIQDFPQIAALVEGYEITIPAAPLQPPKPSLPQGAAAIMGGTSVAPSAGAAVSDGMALGIPVVTGGGHMRKLEEVEADMIRLALHRYRGQMSEVARKLGIGRSTLYRKMKDMGL 496
BLAST of mRNA_P-wetherbeei_contig19412.1.1 vs. uniprot
Match: A0A2W2BYR6_9HYPH (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BYR6_9HYPH) HSP 1 Score: 699 bits (1805), Expect = 1.050e-250 Identity = 359/429 (83.68%), Postives = 392/429 (91.38%), Query Frame = 1
Query: 1 IEKMQGIRGDIPVIVQTAQGSIETVIKAMRAGADDFVVKPVSPERLKISIQNLLKVNALTEEVKRLNKKVGGSLSFGDLIASSPAMANVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESERAGRPFVAVNCGAIPENLVESILFGHEKGSFTGATSRHSGKFLEADGGTLFLDEVAELPLDMQVKLLRAIQEGEIDPVGSRKSVKVNIRLISATNRNMIEMVKAGQFREDLYYRLNVYPMMVPPLRDRKDDIPALVEHFITRLSAEEGRKVRGITPNVLPMLQAYGWPGNVRQLENTIFRAIVLCESDVLEIQDFPQIASLVEGYEIIVPPAMPLAKKPAAPAGPAMTGGNQHVSRSAGHQVSDGMALGIPAVTDGGHIRKLEEVEADMIRLALNRYRGQMSEVARKLGIGRSTLYRKMRDLGL 1287
+E+MQ IRGD+PVIVQTAQGSIETVIKAMRAGADDFVVKPVSPERLK S+QNLLKVNALTEEVKRLNKKVGG+LSF DLIAS+PAMANVLRLGRRGAQS IPILIEGESGVGKEMIARAIQGES+RAGRPFVAVNCGAIPENLVESILFGHEKG+FTGAT RH GKF EADGGTLFLDEVAELPLDMQVKLLRAIQEGE+DPVG+R+ VKVNIRLISATNRNMIEMVKAGQFREDLYYRLNV+P+MVPPLRDRK+DIPALV+HF+TR +AEEGRKVRGITP L +L+AY WPGNVRQLENT+FRA+VLCE L+I+DFPQIASLVEGYEI +PPA LA KPA P G A G + + + V+DG+A GIP VT+GGHIRKLEEVEADMIRLAL RY+GQMSEVARKLGIGRSTLYR+M+DLGL
Sbjct: 68 LERMQAIRGDLPVIVQTAQGSIETVIKAMRAGADDFVVKPVSPERLKASVQNLLKVNALTEEVKRLNKKVGGALSFSDLIASAPAMANVLRLGRRGAQSTIPILIEGESGVGKEMIARAIQGESDRAGRPFVAVNCGAIPENLVESILFGHEKGAFTGATQRHMGKFQEADGGTLFLDEVAELPLDMQVKLLRAIQEGEVDPVGARRPVKVNIRLISATNRNMIEMVKAGQFREDLYYRLNVFPIMVPPLRDRKEDIPALVDHFVTRFAAEEGRKVRGITPEALGLLRAYSWPGNVRQLENTVFRAMVLCEGGRLDIEDFPQIASLVEGYEIRIPPAPQLAPKPALPQGAAAIAGGSPLPKGS-TAVADGVAFGIPVVTEGGHIRKLEEVEADMIRLALARYQGQMSEVARKLGIGRSTLYRRMKDLGL 495
BLAST of mRNA_P-wetherbeei_contig19412.1.1 vs. uniprot
Match: A0A6G6WNW1_9HYPH (Sigma-54-dependent Fis family transcriptional regulator n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6G6WNW1_9HYPH) HSP 1 Score: 690 bits (1781), Expect = 4.230e-247 Identity = 358/431 (83.06%), Postives = 388/431 (90.02%), Query Frame = 1
Query: 1 IEKMQGIRGDIPVIVQTAQGSIETVIKAMRAGADDFVVKPVSPERLKISIQNLLKVNALTEEVKRLNKKVGGSLSFGDLIASSPAMANVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESERAGRPFVAVNCGAIPENLVESILFGHEKGSFTGATSRHSGKFLEADGGTLFLDEVAELPLDMQVKLLRAIQEGEIDPVGSRKSVKVNIRLISATNRNMIEMVKAGQFREDLYYRLNVYPMMVPPLRDRKDDIPALVEHFITRLSAEEGRKVRGITPNVLPMLQAYGWPGNVRQLENTIFRAIVLCESDVLEIQDFPQIASLVEGYEIIVP--PAMPLAKKPAAPAGPAMTGGNQHVSRSAGHQVSDGMALGIPAVTDGGHIRKLEEVEADMIRLALNRYRGQMSEVARKLGIGRSTLYRKMRDLGL 1287
+E+M G+RG +PVIVQTAQGSIETVIKAMRAGADDFVVKP+SPERL++S+QNLLKVNALTEEVKRLNKKVGG+L+F DLIASS AMA V+RLGRRGAQSNIPILIEG+SGVGKE+IARAI GESER GR FVAVNCGAIPENLVESILFGHEKGSFTGAT++H GKF EADGGTLFLDEVAELPLDMQVKLLRAIQEGEIDPVG+RK +K+NIRLISATNRNMIEMVKAGQFREDLYYRLNV+P+MVPPL+DRKDDIPALV HFITR +AEEGRKV GI P L MLQ Y WPGNVRQLENT+FRAIVLCE D+LEIQDFPQIASLVEGYE+ +P PA P A A AGP SRS G +SDGMA+GIPAVTDGGHIRKLEE+EADMIRLAL+RYRGQMSEVARKLGIGRSTLYRKMRDLGL
Sbjct: 68 LERMAGVRGHVPVIVQTAQGSIETVIKAMRAGADDFVVKPISPERLRVSVQNLLKVNALTEEVKRLNKKVGGALTFDDLIASSAAMAGVIRLGRRGAQSNIPILIEGQSGVGKEIIARAIHGESERRGRNFVAVNCGAIPENLVESILFGHEKGSFTGATAKHIGKFQEADGGTLFLDEVAELPLDMQVKLLRAIQEGEIDPVGARKPMKINIRLISATNRNMIEMVKAGQFREDLYYRLNVFPVMVPPLKDRKDDIPALVNHFITRFAAEEGRKVHGIDPQALAMLQLYSWPGNVRQLENTVFRAIVLCEGDILEIQDFPQIASLVEGYEVKIPELPATPAAAAXXA-AGP---------SRSTGSVISDGMAIGIPAVTDGGHIRKLEEIEADMIRLALHRYRGQMSEVARKLGIGRSTLYRKMRDLGL 488
BLAST of mRNA_P-wetherbeei_contig19412.1.1 vs. uniprot
Match: UPI0018C834EA (sigma-54 dependent transcriptional regulator n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI0018C834EA) HSP 1 Score: 673 bits (1737), Expect = 1.510e-240 Identity = 346/429 (80.65%), Postives = 381/429 (88.81%), Query Frame = 1
Query: 1 IEKMQGIRGDIPVIVQTAQGSIETVIKAMRAGADDFVVKPVSPERLKISIQNLLKVNALTEEVKRLNKKVGGSLSFGDLIASSPAMANVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESERAGRPFVAVNCGAIPENLVESILFGHEKGSFTGATSRHSGKFLEADGGTLFLDEVAELPLDMQVKLLRAIQEGEIDPVGSRKSVKVNIRLISATNRNMIEMVKAGQFREDLYYRLNVYPMMVPPLRDRKDDIPALVEHFITRLSAEEGRKVRGITPNVLPMLQAYGWPGNVRQLENTIFRAIVLCESDVLEIQDFPQIASLVEGYEIIVPPAMPLAKKPAAPAGPAMTGGNQHVSRSAGHQVSDGMALGIPAVTDGGHIRKLEEVEADMIRLALNRYRGQMSEVARKLGIGRSTLYRKMRDLGL 1287
+EK++ +RGD+PVIVQT+QGSIETVIKAMRAGADDFVVKPV+PERL++SIQNLLKVNALTEEVKRLNKKV G+L+F DL+ASSPAM NVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGES+RAG+PFVAVNCGAIP+NLVESILFGHEKGSFTGAT +H GKF EADGGTLFLDEVAELPLD+QVKLLRAIQEGEID VGSRK KVNIRLISATN+NMIEMVKAGQFREDLYYRLNVYP+MVP LRDRKDDIPALV HFIT+LSAEEGRKV GIT L MLQ Y WPGNVRQ+ENTIFRAIVLCE++VL++ DFPQIA+LVEGYE+ +P A KKP + R A QVSDG A+G+ VT+GGHIR LEEVEADMI+LA++RYRGQMSEVARKLGIGRSTLYRKMRDLGL
Sbjct: 68 LEKLEAVRGDLPVIVQTSQGSIETVIKAMRAGADDFVVKPVAPERLRVSIQNLLKVNALTEEVKRLNKKVSGALTFDDLVASSPAMNNVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESDRAGKPFVAVNCGAIPQNLVESILFGHEKGSFTGATGKHLGKFAEADGGTLFLDEVAELPLDIQVKLLRAIQEGEIDAVGSRKPTKVNIRLISATNKNMIEMVKAGQFREDLYYRLNVYPVMVPALRDRKDDIPALVNHFITKLSAEEGRKVHGITSQALAMLQLYAWPGNVRQIENTIFRAIVLCETEVLDVADFPQIAALVEGYEVKIPAAPAAVKKP-------------ELVRPANGQVSDGNAIGVSIVTEGGHIRTLEEVEADMIKLAMHRYRGQMSEVARKLGIGRSTLYRKMRDLGL 483
BLAST of mRNA_P-wetherbeei_contig19412.1.1 vs. uniprot
Match: A0A7Y2FRH9_9HYPH (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2FRH9_9HYPH) HSP 1 Score: 641 bits (1654), Expect = 4.450e-229 Identity = 332/411 (80.78%), Postives = 367/411 (89.29%), Query Frame = 1
Query: 58 GSIETVIKAMRAGADDFVVKPVSPERLKISIQNLLKVNALTEEVKRLNKKVGGSLSFGDLIASSPAMANVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESERAGRPFVAVNCGAIPENLVESILFGHEKGSFTGATSRHSGKFLEADGGTLFLDEVAELPLDMQVKLLRAIQEGEIDPVGSRKSVKVNIRLISATNRNMIEMVKAGQFREDLYYRLNVYPMMVPPLRDRKDDIPALVEHFITRLSAEEGRKVRGITPNVLPMLQAYGWPGNVRQLENTIFRAIVLCESDVLEIQDFPQIASLVEGYEIIVPPAMPLAKKPAAPAG-PAMTGGNQHVSRSAGHQVSDGMALGIPAVTDGGHIRKLEEVEADMIRLALNRYRGQMSEVARKLGIGRSTLYRKMRDLGL 1287
GSIETVIKAMRAGA DFVVKPVSPERLK+SIQNLLKVNALTEEVKRLNKKVGG+L+F DLIA+S M NV++LGRRGAQSNIPILIEGESGVGKEM+ARA+QGES+R+G+PFVAVNCGAIPENLVES LFGHEKGSFTGAT++H GKF EADGGTLFLDEVAELPL+MQVKLLRAIQEGE+DPVGSRK VKVNIRLISATNR+MIEMVK GQFREDLYYRLNV+P+MVPPLR+R DDI LVEHFITR +AEEGRKVRGIT ML Y WPGNVRQLENT+FRAIVLCE DVL + DFPQIA+LV+GYE+ +P A K P+G A+ G + +SAG +VSDGMALGIPAVTDGGHIR+L++VEADMIRLALNRYRGQMS+VARKLGIGRSTLYRKMRDLGL
Sbjct: 1 GSIETVIKAMRAGAGDFVVKPVSPERLKVSIQNLLKVNALTEEVKRLNKKVGGALTFDDLIAASAGMTNVIKLGRRGAQSNIPILIEGESGVGKEMVARAMQGESDRSGKPFVAVNCGAIPENLVESTLFGHEKGSFTGATAKHIGKFQEADGGTLFLDEVAELPLEMQVKLLRAIQEGEVDPVGSRKPVKVNIRLISATNRDMIEMVKQGQFREDLYYRLNVFPVMVPPLRERTDDIAGLVEHFITRFAAEEGRKVRGITRQAAEMLTKYQWPGNVRQLENTVFRAIVLCEGDVLTVDDFPQIAALVDGYEVSIPAAPVQEAKDNLPSGHDAIIGIDNIPVQSAGAEVSDGMALGIPAVTDGGHIRRLDDVEADMIRLALNRYRGQMSQVARKLGIGRSTLYRKMRDLGL 411
BLAST of mRNA_P-wetherbeei_contig19412.1.1 vs. uniprot
Match: A0A848Y6V8_9HYPH (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A848Y6V8_9HYPH) HSP 1 Score: 633 bits (1632), Expect = 2.700e-224 Identity = 328/426 (77.00%), Postives = 366/426 (85.92%), Query Frame = 1
Query: 10 MQGIRGDIPVIVQTAQGSIETVIKAMRAGADDFVVKPVSPERLKISIQNLLKVNALTEEVKRLNKKVGGSLSFGDLIASSPAMANVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESERAGRPFVAVNCGAIPENLVESILFGHEKGSFTGATSRHSGKFLEADGGTLFLDEVAELPLDMQVKLLRAIQEGEIDPVGSRKSVKVNIRLISATNRNMIEMVKAGQFREDLYYRLNVYPMMVPPLRDRKDDIPALVEHFITRLSAEEGRKVRGITPNVLPMLQAYGWPGNVRQLENTIFRAIVLCESDVLEIQDFPQIASLVEGYEIIVPPAMPLAKKPAAPAGPAMTGGNQHVSRSAGHQVSDGMALGIPAVTDGGHIRKLEEVEADMIRLALNRYRGQMSEVARKLGIGRSTLYRKMRDLGL 1287
M+ IPVIVQTAQGSIETV+KAMRAGADDFVVKPVSPERLK+S+QNLLKVNALT EVKRL KK G L+F DLIASSPAMANV+ LGRR AQSNIPILIEGESGVGKE+IARAIQGESER GRP + VNCGAIPENLVESILFGHEKGSFTGATS+H GKF EA GGTLFLDEV ELPLDMQVKLLRAIQEGEIDPVGS++ V+V+IRLISATNRNMI+MVK GQFREDLYYRLNV+P+MVPPLR+R +D+ LVEHF+TR +AEEGRK+RGI P+ MLQ Y WPGNVRQLENT+FRA+VLC+SD L I DFPQIA+LV+G+E VP A P+A P AM GG+ + S VSDG+ GIPAVT+GGHIR+LE+VE DMIRLAL+RYRG MSEVARKLGIGRSTLYRK+RDLGL
Sbjct: 71 MEKKSSSIPVIVQTAQGSIETVVKAMRAGADDFVVKPVSPERLKVSLQNLLKVNALTTEVKRLQKKAEGVLTFDDLIASSPAMANVMHLGRRAAQSNIPILIEGESGVGKEVIARAIQGESERRGRPLITVNCGAIPENLVESILFGHEKGSFTGATSKHIGKFQEASGGTLFLDEVGELPLDMQVKLLRAIQEGEIDPVGSKRPVQVDIRLISATNRNMIDMVKEGQFREDLYYRLNVFPIMVPPLRERPEDMTNLVEHFVTRFAAEEGRKIRGIHPDAAAMLQQYEWPGNVRQLENTVFRAVVLCDSDFLTISDFPQIAALVDGFEAEVP-AAPVAPAPVESNVSAMIGGDLPQTHSTAGMVSDGVGYGIPAVTEGGHIRRLEDVEGDMIRLALDRYRGHMSEVARKLGIGRSTLYRKVRDLGL 495
BLAST of mRNA_P-wetherbeei_contig19412.1.1 vs. uniprot
Match: A0A7V2SQ17_9HYPH (Sigma-54-dependent Fis family transcriptional regulator n=2 Tax=root TaxID=1 RepID=A0A7V2SQ17_9HYPH) HSP 1 Score: 629 bits (1622), Expect = 6.710e-223 Identity = 328/430 (76.28%), Postives = 369/430 (85.81%), Query Frame = 1
Query: 1 IEKMQGIRGDIPVIVQTAQGSIETVIKAMRAGADDFVVKPVSPERLKISIQNLLKVNALTEEVKRLNKKVGGSLSFGDLIASSPAMANVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESERAGRPFVAVNCGAIPENLVESILFGHEKGSFTGATSRHSGKFLEADGGTLFLDEVAELPLDMQVKLLRAIQEGEIDPVGSRKSVKVNIRLISATNRNMIEMVKAGQFREDLYYRLNVYPMMVPPLRDRKDDIPALVEHFITRLSAEEGRKVRGITPNVLPMLQAYGWPGNVRQLENTIFRAIVLCESDVLEIQDFPQIASLVEGYEIIVPPAMPLAKKPAAPAGPA-MTGGNQHVSRSAGHQVSDGMALGIPAVTDGGHIRKLEEVEADMIRLALNRYRGQMSEVARKLGIGRSTLYRKMRDLGL 1287
+EK+ R D+PVIVQTAQGSIETV+KAMRAGADDFVVKPVSPERL+ISIQNLLKVN LTEEVKRLN KV G L+F +LIASSPAMANV +LG+R A+SNIP+LIEGESGVGKEM+ARAIQGES+RAG+PFV VNCGAIP NLVES LFGHEKGSFTGA S+H GKF EA GGTLFLDEVAELPLDMQVKLLRA+QEGE+DPVGSRK VKV+IRLISATNR+MIEMVK G+FREDLYYRLNV+P+ VPPLR+R DI AL EHFI R +AEEGRKV GI P L +L+AY WPGNVRQLENTIFRAIVL ESD+L++ DFPQIA+LV+G++ VP A LA P P+G A M GG+ S +SDG +GI AVTDGGHIR+LEE+E DMIRLAL+RYRGQMS+VARKLGIGRSTLYRKMR LGL
Sbjct: 68 LEKLSVHRPDMPVIVQTAQGSIETVVKAMRAGADDFVVKPVSPERLRISIQNLLKVNRLTEEVKRLNSKVAGLLTFDELIASSPAMANVTKLGQRAAKSNIPVLIEGESGVGKEMVARAIQGESDRAGKPFVTVNCGAIPVNLVESTLFGHEKGSFTGAISKHIGKFQEASGGTLFLDEVAELPLDMQVKLLRALQEGEVDPVGSRKPVKVDIRLISATNRDMIEMVKGGEFREDLYYRLNVFPVNVPPLRERISDIAALCEHFIVRFAAEEGRKVHGIAPRALDLLRAYAWPGNVRQLENTIFRAIVLSESDMLQVDDFPQIAALVDGFDATVPDAPALAPAPVLPSGQAAMIGGDSPASPVGA--ISDGSGVGISAVTDGGHIRRLEEIEKDMIRLALHRYRGQMSQVARKLGIGRSTLYRKMRSLGL 495
BLAST of mRNA_P-wetherbeei_contig19412.1.1 vs. uniprot
Match: UPI0011853586 (sigma-54 dependent transcriptional regulator n=1 Tax=Rhodoligotrophos appendicifer TaxID=987056 RepID=UPI0011853586) HSP 1 Score: 617 bits (1592), Expect = 2.350e-218 Identity = 323/424 (76.18%), Postives = 358/424 (84.43%), Query Frame = 1
Query: 22 RGDIPVIVQTAQGSIETVIKAMRAGADDFVVKPVSPERLKISIQNLLKVNALTEEVKRLNKKVGGSLSFGDLIASSPAMANVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESERAGRPFVAVNCGAIPENLVESILFGHEKGSFTGATSRHSGKFLEADGGTLFLDEVAELPLDMQVKLLRAIQEGEIDPVGSRKSVKVNIRLISATNRNMIEMVKAGQFREDLYYRLNVYPMMVPPLRDRKDDIPALVEHFITRLSAEEGRKVRGITPNVLPMLQAYGWPGNVRQLENTIFRAIVLCESDVLEIQDFPQIASLVEGYEIIVP--PAMPLAKKPAAPAGPAMTGGNQHVSRSAGHQVSDGMALGIPAVTDGGHIRKLEEVEADMIRLALNRYRGQMSEVARKLGIGRSTLYRKMRDLGL 1287
R D+ V++QT+ GSIETV+K+MRAGADDFVVKPV+PERLK+SIQNLLKV+ALTEEVKRLN K G+L+F LIA+S MANV RLGRR A SNIPILIEGESGVGKEMIARAIQGES+R G+PFV VNCGAIPENLVESILFGHEKG+FTGA +H GKFLEA+GGTLFLDEV ELP D+QVKLLRAIQEGEIDPVG+RK VKVNIRLISATNR+MIEMVK G FREDLYYRLNV+P+MVPPLRDR +DIP LV+HFI R +AEEGRK+RGI PN L MLQAY WPGNVRQLENT+FRAIVLCE+D LEI DFPQIA+ V+GYE +P P+ KP A GGN + G V ALGI AVT GGHIRKLEEVEADMIRLA+ RYRGQMSEVARKLGIGRSTLYRK+RDLGL
Sbjct: 75 RKDVAVVIQTSHGSIETVVKSMRAGADDFVVKPVNPERLKVSIQNLLKVSALTEEVKRLNAKATGALTFDGLIAASAGMANVSRLGRRAAASNIPILIEGESGVGKEMIARAIQGESDRRGKPFVTVNCGAIPENLVESILFGHEKGAFTGAVQKHPGKFLEANGGTLFLDEVGELPSDIQVKLLRAIQEGEIDPVGARKPVKVNIRLISATNRDMIEMVKRGTFREDLYYRLNVFPIMVPPLRDRLEDIPPLVDHFIVRFAAEEGRKIRGIAPNALAMLQAYSWPGNVRQLENTVFRAIVLCETDRLEIDDFPQIAAQVDGYEPRIPSVPSAATPGKPEIAAAAGQDGGNVPPGQVVGGHV----ALGISAVTSGGHIRKLEEVEADMIRLAMERYRGQMSEVARKLGIGRSTLYRKVRDLGL 494
BLAST of mRNA_P-wetherbeei_contig19412.1.1 vs. uniprot
Match: UPI0010C9F8BF (sigma-54 dependent transcriptional regulator n=1 Tax=Rhodoligotrophos defluvii TaxID=2561934 RepID=UPI0010C9F8BF) HSP 1 Score: 610 bits (1574), Expect = 1.530e-215 Identity = 321/427 (75.18%), Postives = 353/427 (82.67%), Query Frame = 1
Query: 22 RGDIPVIVQTAQGSIETVIKAMRAGADDFVVKPVSPERLKISIQNLLKVNALTEEVKRLNKKVGGSLSFGDLIASSPAMANVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESERAGRPFVAVNCGAIPENLVESILFGHEKGSFTGATSRHSGKFLEADGGTLFLDEVAELPLDMQVKLLRAIQEGEIDPVGSRKSVKVNIRLISATNRNMIEMVKAGQFREDLYYRLNVYPMMVPPLRDRKDDIPALVEHFITRLSAEEGRKVRGITPNVLPMLQAYGWPGNVRQLENTIFRAIVLCESDVLEIQDFPQIASLVEGYEIIVPPA----MPLAKKPAAPA-GPAMTGGNQHVSRSAGHQVSDGMALGIPAVTDGGHIRKLEEVEADMIRLALNRYRGQMSEVARKLGIGRSTLYRKMRDLGL 1287
R D+PVIVQT+ GSIETV+KAMRAGADDFVVKPV+PERLK+SIQNLLKVNALTEEVKRLN + G L+F LIA SPAM+ V RLGRR A SNIPILIEGESGVGKEMIARAIQGES+R G+PFV VNCGAIPENLVESILFGHEKG+FTGA +H GKF EADGGTLFLDEV ELP D+QVKLLRAIQEGEIDPVG+RK VKVNIRLISATNRN+I+MVK G FREDLYYRLNV+P+ VPPLR+R +DIP LVEHFI R +AEEGRK+RGI+P L MLQ+Y WPGNVRQLEN +FRAIVLCE D LE+ DFPQIA V GY +PPA AP GPA G + S+ G+ LGIPAVT GGHIRKLEEVEADMIRLA+ RYRGQMSEVARKLGIGRSTLYRK+RDLGL
Sbjct: 75 RKDLPVIVQTSHGSIETVVKAMRAGADDFVVKPVNPERLKVSIQNLLKVNALTEEVKRLNARASGQLTFDSLIAESPAMSAVARLGRRAAASNIPILIEGESGVGKEMIARAIQGESDRRGKPFVTVNCGAIPENLVESILFGHEKGAFTGAVQKHIGKFQEADGGTLFLDEVGELPADIQVKLLRAIQEGEIDPVGARKPVKVNIRLISATNRNLIDMVKRGTFREDLYYRLNVFPINVPPLRERLEDIPPLVEHFIVRFAAEEGRKIRGISPTALNMLQSYSWPGNVRQLENAVFRAIVLCEGDTLEVNDFPQIAPQVGGYAARIPPAPXXXXXXXXXXTAPLQGPAAAG--DPAAGSSDQIAGAGVPLGIPAVTSGGHIRKLEEVEADMIRLAMQRYRGQMSEVARKLGIGRSTLYRKIRDLGL 499
BLAST of mRNA_P-wetherbeei_contig19412.1.1 vs. uniprot
Match: A0A7C5SDT8_9PROT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Thermopetrobacter sp. TaxID=2268141 RepID=A0A7C5SDT8_9PROT) HSP 1 Score: 608 bits (1567), Expect = 6.520e-215 Identity = 321/429 (74.83%), Postives = 360/429 (83.92%), Query Frame = 1
Query: 1 IEKMQGIRGDIPVIVQTAQGSIETVIKAMRAGADDFVVKPVSPERLKISIQNLLKVNALTEEVKRLNKKVGGSLSFGDLIASSPAMANVLRLGRRGAQSNIPILIEGESGVGKEMIARAIQGESERAGRPFVAVNCGAIPENLVESILFGHEKGSFTGATSRHSGKFLEADGGTLFLDEVAELPLDMQVKLLRAIQEGEIDPVGSRKSVKVNIRLISATNRNMIEMVKAGQFREDLYYRLNVYPMMVPPLRDRKDDIPALVEHFITRLSAEEGRKVRGITPNVLPMLQAYGWPGNVRQLENTIFRAIVLCESDVLEIQDFPQIASLVEGYEIIVPPAMPLAKKPAAPAGPAMTGGNQHVSRSAGHQVSDGMALGIPAVTDGGHIRKLEEVEADMIRLALNRYRGQMSEVARKLGIGRSTLYRKMRDLGL 1287
+EK+ R ++PVIVQTAQGSIE V++AMRAGADDFVVKPV+PERLK+SIQNLLKVNALTEEVKRLNKKV G+L+F DLI SP M V+ LGRR AQSNIP+LIEGESGVGKEM+ARAIQGES RAG+PFVAVNCGAIPENLVES LFGHEKG+FTGA S+H GKF EA GGTLFLDEVAEL LDMQVKLLRA+QEGEIDPVG+R+ VKV++R+ISATNR+MIEMVK G FREDLYYRLNV+P+MVPPLR R DIP LVEHFI R +AEEGRKVRGI P+ L MLQ Y WPGNVRQLENTIFRAIVL E D L I DFPQIA+LVEGY++ VP A PA P PA TG + V+DG A+G+ VT+GGH+R LEEVEADMIRLAL RYRGQMSEVARKLGIGRSTLYRK++ LG+
Sbjct: 51 LEKLSIDRPEMPVIVQTAQGSIEMVVRAMRAGADDFVVKPVNPERLKVSIQNLLKVNALTEEVKRLNKKVKGALTFDDLIVKSPGMQQVVNLGRRAAQSNIPVLIEGESGVGKEMVARAIQGESARAGKPFVAVNCGAIPENLVESTLFGHEKGAFTGAVSKHIGKFQEASGGTLFLDEVAELSLDMQVKLLRALQEGEIDPVGARRPVKVDVRIISATNRDMIEMVKQGTFREDLYYRLNVFPIMVPPLRKRVADIPPLVEHFIHRFAAEEGRKVRGIAPDALRMLQQYSWPGNVRQLENTIFRAIVLAEGDELTIADFPQIAALVEGYDVQVPAA------PAEPQ-PAQTGPAGGAAADPA-TVADGSAIGVSVVTEGGHVRTLEEVEADMIRLALARYRGQMSEVARKLGIGRSTLYRKIKALGI 471 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19412.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19412.1.1 >prot_P-wetherbeei_contig19412.1.1 ID=prot_P-wetherbeei_contig19412.1.1|Name=mRNA_P-wetherbeei_contig19412.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=426bp MQGIRGDIPVIVQTAQGSIETVIKAMRAGADDFVVKPVSPERLKISIQNLback to top mRNA from alignment at P-wetherbeei_contig19412:1..1287+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19412.1.1 ID=mRNA_P-wetherbeei_contig19412.1.1|Name=mRNA_P-wetherbeei_contig19412.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1287bp|location=Sequence derived from alignment at P-wetherbeei_contig19412:1..1287+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19412:1..1287+ >mRNA_P-wetherbeei_contig19412.1.1 ID=mRNA_P-wetherbeei_contig19412.1.1|Name=mRNA_P-wetherbeei_contig19412.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1278bp|location=Sequence derived from alignment at P-wetherbeei_contig19412:1..1287+ (Phaeothamnion wetherbeei SAG_119_79)back to top |