mRNA_P-wetherbeei_contig19402.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19402.1.1
Unique NamemRNA_P-wetherbeei_contig19402.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig19402.1.1 vs. uniprot
Match: D7FZ84_ECTSI (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ84_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 3.830e-60
Identity = 98/118 (83.05%), Postives = 102/118 (86.44%), Query Frame = 1 
Query:    1 ALLCAPPCSTNGRLAGRLQADTILIEELNRAGVYRDIGQAFAVLLPVKSVGVMGDLRTYEKVCCIRCVQTTDYMTADWYHMPFEVLGRISNRIINEVRGINRVTYDISSKPPATIEWE 354
            A+ C  P S       R +AD I+IEELNRA VYRDIGQAFAVLLPVKSVGVMGD RTYEKVC IRCVQTTDYMTADWYHMP+EVLGRISNRIINEVRGINRVTYDISSKPPATIEWE
Sbjct:  318 AIRCLAPLSEENLSMAR-EADAIMIEELNRANVYRDIGQAFAVLLPVKSVGVMGDCRTYEKVCAIRCVQTTDYMTADWYHMPYEVLGRISNRIINEVRGINRVTYDISSKPPATIEWE 434
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BLAST of mRNA_P-wetherbeei_contig19402.1.1 vs. uniprot
Match: A0A835ZID4_9STRA (GMP synthase (glutamine-hydrolyzing) n=3 Tax=cellular organisms TaxID=131567 RepID=A0A835ZID4_9STRA)

HSP 1 Score: 196 bits (499), Expect = 3.560e-58
Identity = 92/100 (92.00%), Postives = 96/100 (96.00%), Query Frame = 1 
Query:   55 QADTILIEELNRAGVYRDIGQAFAVLLPVKSVGVMGDLRTYEKVCCIRCVQTTDYMTADWYHMPFEVLGRISNRIINEVRGINRVTYDISSKPPATIEWE 354
            +AD ILIEELNRAG+YR+IGQAFAVLLPVKSVGVMGD RTYEKVC IRCVQTTDYMTADWYHMP+EVLGRISNRIINEVRGINRV YDISSKPPATIEWE
Sbjct:  434 EADAILIEELNRAGIYREIGQAFAVLLPVKSVGVMGDFRTYEKVCAIRCVQTTDYMTADWYHMPYEVLGRISNRIINEVRGINRVVYDISSKPPATIEWE 533
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BLAST of mRNA_P-wetherbeei_contig19402.1.1 vs. uniprot
Match: A0A7S2BPD2_9STRA (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BPD2_9STRA)

HSP 1 Score: 178 bits (451), Expect = 4.880e-55
Identity = 84/100 (84.00%), Postives = 90/100 (90.00%), Query Frame = 1 
Query:   55 QADTILIEELNRAGVYRDIGQAFAVLLPVKSVGVMGDLRTYEKVCCIRCVQTTDYMTADWYHMPFEVLGRISNRIINEVRGINRVTYDISSKPPATIEWE 354
            +AD I+IEEL++ G YR IGQAF VLLPVKSVGVMGD RTYE VC +RCVQTTDYMTADWYHMP+EVLG ISNRIINEVRGINRV YDISSKPPATIEWE
Sbjct:   72 EADAIMIEELHKNGQYRLIGQAFVVLLPVKSVGVMGDGRTYENVCAVRCVQTTDYMTADWYHMPYEVLGTISNRIINEVRGINRVCYDISSKPPATIEWE 171
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BLAST of mRNA_P-wetherbeei_contig19402.1.1 vs. uniprot
Match: A0A6V1SBM3_HETAK (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SBM3_HETAK)

HSP 1 Score: 185 bits (470), Expect = 8.830e-54
Identity = 87/100 (87.00%), Postives = 92/100 (92.00%), Query Frame = 1 
Query:   55 QADTILIEELNRAGVYRDIGQAFAVLLPVKSVGVMGDLRTYEKVCCIRCVQTTDYMTADWYHMPFEVLGRISNRIINEVRGINRVTYDISSKPPATIEWE 354
            QAD ILIEEL+RAG+YR+IGQAF VLLP KSVGVMGD RTYE VC +RCVQTTDYMTADWYHMP+ VLG ISNRIINEVRGINRVTYDISSKPPATIEWE
Sbjct:  450 QADAILIEELHRAGIYREIGQAFCVLLPCKSVGVMGDGRTYENVCAVRCVQTTDYMTADWYHMPYSVLGIISNRIINEVRGINRVTYDISSKPPATIEWE 549
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BLAST of mRNA_P-wetherbeei_contig19402.1.1 vs. uniprot
Match: A0A6U0XG24_9STRA (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XG24_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.760e-53
Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 1 
Query:   55 QADTILIEELNRAGVYRDIGQAFAVLLPVKSVGVMGDLRTYEKVCCIRCVQTTDYMTADWYHMPFEVLGRISNRIINEVRGINRVTYDISSKPPATIEWE 354
            +AD ILIEEL+RA VYR IGQAFAVLLP KSVGVMGD RTYE VC IRCVQTTDYMTADW+HMP+EVLGRISNRIINEVRGINRVTYDISSKPPATIEWE
Sbjct:  471 EADAILIEELHRAEVYRAIGQAFAVLLPCKSVGVMGDGRTYEHVCAIRCVQTTDYMTADWFHMPYEVLGRISNRIINEVRGINRVTYDISSKPPATIEWE 570
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BLAST of mRNA_P-wetherbeei_contig19402.1.1 vs. uniprot
Match: A0A7S2CTG2_9STRA (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTG2_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.450e-52
Identity = 88/109 (80.73%), Postives = 95/109 (87.16%), Query Frame = 1 
Query:   28 TNGRLAGRLQADTILIEELNRAGVYRDIGQAFAVLLPVKSVGVMGDLRTYEKVCCIRCVQTTDYMTADWYHMPFEVLGRISNRIINEVRGINRVTYDISSKPPATIEWE 354
            T+ RL    QAD I+I+EL+ A VYR IGQAF VLLPVKSVGVMGD RTYE VC +RCVQTTDYMTADWYHMP+EVLG IS+RIINEVRGINRVTYDISSKPPATIEWE
Sbjct:  438 THPRLEMLRQADDIMIQELHNANVYRLIGQAFVVLLPVKSVGVMGDGRTYENVCAVRCVQTTDYMTADWYHMPYEVLGTISSRIINEVRGINRVTYDISSKPPATIEWE 546
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BLAST of mRNA_P-wetherbeei_contig19402.1.1 vs. uniprot
Match: A0A7S0C7X0_9STRA (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C7X0_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.180e-48
Identity = 77/109 (70.64%), Postives = 92/109 (84.40%), Query Frame = 1 
Query:   28 TNGRLAGRLQADTILIEELNRAGVYRDIGQAFAVLLPVKSVGVMGDLRTYEKVCCIRCVQTTDYMTADWYHMPFEVLGRISNRIINEVRGINRVTYDISSKPPATIEWE 354
            T  R+A    AD I+I+EL  A +YR IGQAF VLLPVKSVGVMGD RTYE V  +RCV+TTDYMTAD++H+P++V+G++SNRIINEVRGINR+ YDISSKPPATIEWE
Sbjct:  109 TAERVAILQHADDIMIQELRAADLYRQIGQAFVVLLPVKSVGVMGDGRTYENVAAVRCVETTDYMTADFFHLPYDVMGKMSNRIINEVRGINRLCYDISSKPPATIEWE 217
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BLAST of mRNA_P-wetherbeei_contig19402.1.1 vs. uniprot
Match: A0A7S2UVV2_9STRA (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVV2_9STRA)

HSP 1 Score: 170 bits (430), Expect = 6.540e-48
Identity = 79/99 (79.80%), Postives = 88/99 (88.89%), Query Frame = 1 
Query:   58 ADTILIEELNRAGVYRDIGQAFAVLLPVKSVGVMGDLRTYEKVCCIRCVQTTDYMTADWYHMPFEVLGRISNRIINEVRGINRVTYDISSKPPATIEWE 354
            AD ILI+EL++  +Y+ IGQAF VLLP KSVGVMGD RTYE VC +RCVQTTDYMTADW+HMP+EV+G ISNRIINEV GINRVTYDISSKPPATIEWE
Sbjct:  455 ADDILIQELHKHDLYKKIGQAFCVLLPCKSVGVMGDGRTYENVCAVRCVQTTDYMTADWFHMPYEVMGIISNRIINEVSGINRVTYDISSKPPATIEWE 553
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BLAST of mRNA_P-wetherbeei_contig19402.1.1 vs. uniprot
Match: K0TMP8_THAOC (GMP synthase (glutamine-hydrolyzing) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TMP8_THAOC)

HSP 1 Score: 169 bits (427), Expect = 1.420e-47
Identity = 81/109 (74.31%), Postives = 93/109 (85.32%), Query Frame = 1 
Query:   28 TNGRLAGRLQADTILIEELNRAGVYRDIGQAFAVLLPVKSVGVMGDLRTYEKVCCIRCVQTTDYMTADWYHMPFEVLGRISNRIINEVRGINRVTYDISSKPPATIEWE 354
            T  R+A   +AD I+IEEL  +G YR IGQAF VLLPVKSVGVMGD RTYE V C+RCV+TTDYMTAD+YH+PFEV+G +S+RIINEVRGINR+ YDISSKPPATIEWE
Sbjct:  430 TPERVAILQEADAIMIEELYSSGHYRAIGQAFVVLLPVKSVGVMGDGRTYENVACVRCVETTDYMTADFYHLPFEVMGNMSSRIINEVRGINRLCYDISSKPPATIEWE 538
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BLAST of mRNA_P-wetherbeei_contig19402.1.1 vs. uniprot
Match: A0A7C1JXZ7_9BACT (GMP synthase (Glutamine-hydrolyzing) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1JXZ7_9BACT)

HSP 1 Score: 156 bits (395), Expect = 1.810e-47
Identity = 72/100 (72.00%), Postives = 86/100 (86.00%), Query Frame = 1 
Query:   55 QADTILIEELNRAGVYRDIGQAFAVLLPVKSVGVMGDLRTYEKVCCIRCVQTTDYMTADWYHMPFEVLGRISNRIINEVRGINRVTYDISSKPPATIEWE 354
            QAD I++EE+ RAG+YR I QAFAVLLPV+SVGVMGD RTY  V  IR +Q+ D+MTADW  +P+E+LGRIS+RIINEV+G+NRV YDISSKPPATIEWE
Sbjct:    2 QADAIVVEEIERAGLYRQIAQAFAVLLPVQSVGVMGDARTYADVVAIRSIQSEDFMTADWSRLPYELLGRISSRIINEVQGVNRVVYDISSKPPATIEWE 101
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19402.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ84_ECTSI3.830e-6083.05GMP synthase (glutamine-hydrolyzing) n=1 Tax=Ectoc... [more]
A0A835ZID4_9STRA3.560e-5892.00GMP synthase (glutamine-hydrolyzing) n=3 Tax=cellu... [more]
A0A7S2BPD2_9STRA4.880e-5584.00GMP synthase (glutamine-hydrolyzing) n=1 Tax=Flore... [more]
A0A6V1SBM3_HETAK8.830e-5487.00GMP synthase (glutamine-hydrolyzing) n=1 Tax=Heter... [more]
A0A6U0XG24_9STRA1.760e-5389.00GMP synthase (glutamine-hydrolyzing) n=1 Tax=Rhizo... [more]
A0A7S2CTG2_9STRA2.450e-5280.73GMP synthase (glutamine-hydrolyzing) n=1 Tax=Dicty... [more]
A0A7S0C7X0_9STRA1.180e-4870.64GMP synthase (glutamine-hydrolyzing) n=1 Tax=Probo... [more]
A0A7S2UVV2_9STRA6.540e-4879.80GMP synthase (glutamine-hydrolyzing) n=1 Tax=Fibro... [more]
K0TMP8_THAOC1.420e-4774.31GMP synthase (glutamine-hydrolyzing) n=1 Tax=Thala... [more]
A0A7C1JXZ7_9BACT1.810e-4772.00GMP synthase (Glutamine-hydrolyzing) n=1 Tax=Planc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19402contigP-wetherbeei_contig19402:349..1041 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FZ84
Preferred nameGMPS
PFAMsGATase,GMP_synt_C,NAD_synthase
Model size357
Max annot lvl2759|Eukaryota
KEGG rclassRC00010,RC00204
KEGG koko:K01951,ko:K04257
KEGG ReactionR01230,R01231,R08244
KEGG Pathwayko00230,ko00983,ko01100,ko04740,map00230,map00983,map01100,map04740
KEGG ModuleM00050
Hectar predicted targeting categoryother localisation
GOsGO:0000902,GO:0000904,GO:0001101,GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006144,GO:0006163,GO:0006164,GO:0006177,GO:0006325,GO:0006464,GO:0006508,GO:0006520,GO:0006541,GO:0006543,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0006996,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0008047,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009112,GO:0009113,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009605,GO:0009653,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010604,GO:0010952,GO:0016043,GO:0016054,GO:0016504,GO:0016569,GO:0016570,GO:0016578,GO:0016579,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0022008,GO:0030030,GO:0030154,GO:0030162,GO:0030182,GO:0030234,GO:0031175,GO:0031323,GO:0031325,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0035800,GO:0036211,GO:0040011,GO:0042221,GO:0042278,GO:0042330,GO:0042440,GO:0042451,GO:0042455,GO:0042493,GO:0042802,GO:0043085,GO:0043170,GO:0043200,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043436,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045862,GO:0046037,GO:0046112,GO:0046128,GO:0046129,GO:0046148,GO:0046390,GO:0046395,GO:0046483,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051276,GO:0051336,GO:0051345,GO:0052547,GO:0055086,GO:0060255,GO:0061134,GO:0061564,GO:0065007,GO:0065009,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0080090,GO:0090407,GO:0097485,GO:0098772,GO:0120036,GO:0120039,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901367,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:2000152,GO:2000158
Exons2
Evalue6.28e-61
EggNOG OGsCOG0519@1|root,KOG1622@2759|Eukaryota
EC6.3.5.2
DescriptionGMP synthase (glutamine-hydrolyzing) activity
Cds size357
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko04030
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186171.3687885-CDS-P-wetherbeei_contig19402:348..4721683186171.3687885-CDS-P-wetherbeei_contig19402:348..472Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19402 349..472 -
1683186171.3808725-CDS-P-wetherbeei_contig19402:808..10411683186171.3808725-CDS-P-wetherbeei_contig19402:808..1041Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19402 809..1041 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19402.1.1prot_P-wetherbeei_contig19402.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19402 349..1041 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19402.1.1

>prot_P-wetherbeei_contig19402.1.1 ID=prot_P-wetherbeei_contig19402.1.1|Name=mRNA_P-wetherbeei_contig19402.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp
ALLCAPPCSTNGRLAGRLQADTILIEELNRAGVYRDIGQAFAVLLPVKSV
GVMGDLRTYEKVCCIRCVQTTDYMTADWYHMPFEVLGRISNRIINEVRGI
NRVTYDISSKPPATIEWE*
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mRNA from alignment at P-wetherbeei_contig19402:349..1041-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19402.1.1 ID=mRNA_P-wetherbeei_contig19402.1.1|Name=mRNA_P-wetherbeei_contig19402.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=693bp|location=Sequence derived from alignment at P-wetherbeei_contig19402:349..1041- (Phaeothamnion wetherbeei SAG_119_79)
GCCCTACTCTGTGCTCCCCCTTGCTCCACCAACGGCCGGCTGGCTGGCCG
GCTGCAGGCGGACACCATCTTGATAGAGGAGCTGAACCGGGCCGGCGTCT
ACCGCGACATCGGGCAGGCGTTCGCGGTGCTGCTGCCCGTCAAGAGCGTC
GGGGTGATGGGCGACCTGCGGACGTACGAGAAGGTCTGCTGCATACGCTG
CGTCCAGACCACGGACTACATGACGGCGGACTGGTGAGCCCATCTTCTTT
CTCTTCCTGTTTTTTGTGTTCCTTAGAATTTCCTTAGACGCGCCTCGCGT
GTCGCTGGCGCCGAGCGCCGACGGTGGACTTGGGAGTGTGGCAGAGACCA
TGCGTACCATGAATGACATAGCCTGATTGACCTCTTTGTGCGTCGATGTG
TTTCCTTTGTCGTCCTTTGCTTGCTGACGCACCGAGGACTCGTGTATTCA
GCTATTGCTTTTCTGTTGCGTTTGGTTAAGCCGCAGTAGGTGCTGTATTG
AAGATATCTTTCCCTCCCGAACACTGGTCATACATCATGTCTGCGGTGCG
GCATCTGTCTGGCGCGCAGGTACCACATGCCGTTCGAGGTGCTGGGGCGC
ATCTCGAACCGCATTATCAACGAGGTCCGCGGCATCAACCGCGTCACATA
CGATATTAGCTCCAAGCCGCCGGCAACCATCGAGTGGGAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19402:349..1041-

>mRNA_P-wetherbeei_contig19402.1.1 ID=mRNA_P-wetherbeei_contig19402.1.1|Name=mRNA_P-wetherbeei_contig19402.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig19402:349..1041- (Phaeothamnion wetherbeei SAG_119_79)
GCCCTACTCTGTGCTCCCCCTTGCTCCACCAACGGCCGGCTGGCTGGCCG
GCTGCAGGCGGACACCATCTTGATAGAGGAGCTGAACCGGGCCGGCGTCT
ACCGCGACATCGGGCAGGCGTTCGCGGTGCTGCTGCCCGTCAAGAGCGTC
GGGGTGATGGGCGACCTGCGGACGTACGAGAAGGTCTGCTGCATACGCTG
CGTCCAGACCACGGACTACATGACGGCGGACTGGTACCACATGCCGTTCG
AGGTGCTGGGGCGCATCTCGAACCGCATTATCAACGAGGTCCGCGGCATC
AACCGCGTCACATACGATATTAGCTCCAAGCCGCCGGCAACCATCGAGTG
GGAATGA
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