mRNA_P-wetherbeei_contig1939.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1939.1.2
Unique NamemRNA_P-wetherbeei_contig1939.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1939.1.2 vs. uniprot
Match: D8LRK0_ECTSI (Nucleosome/chromatin assembly factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK0_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 4.280e-27
Identity = 129/486 (26.54%), Postives = 192/486 (39.51%), Query Frame = 2 
Query: 1397 VEDRELEGMEAKL----GTKTQLPARP-KPTPLALSFAESALSKEVLSDLLFVWDFLRSFGSLLHLRPCSLDALYGAVSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAKIPPLLVAINMAMLRAALARRPDGSPVREAGAGHGSLVAARVLLGDVLNTATWPEVLRLFTRAQERYYRALYARRAGGASGWLTPGDCLAEALRRVSGDGGCVDDHGXXXXXXXXXXXXXXGVGYAELPAAHKLALLRWLTDEVVDSAAVRQRVDEQVD-QRNALLMNRRKAEYTERELMRAME---AGELRSDGQAVSRREL-----------RNAEEVRRRAVEQIAHT------------------------------SRLWNIRREPLGLDADYNCYWAFPSDPTRIF-IEPQGGGEWMQYVYKEELLQLRDSLHPRGKREGALRRVLEDNLERLLAG 2701
            VED  L   E +     G   + P RP +PTP+        +S   + DL+ VWDFL++FG  L+L+  S+  L                                                                       + PL+  +++A+LR AL R+ DGSP  EA A   S+   R +LGD+LN ATWPEV+R F  A  RY RAL++R   G   W+  G  LA A+  +S                          GY +L ++  L +LRWL+D ++DS +VR ++ +  + Q  A + +R+KAE  +  +  ++    A     D  A+                   E V    +EQ A                                 +   +RRE LG D ++N YW F   P+ +  +E +GG  W QY  ++E+  L DS HPRGKR   LRR L  + + +  G
Sbjct:  359 VEDDVLHAREQETQTGGGATAEPPLRPARPTPIN----RLRVSAGAVGDLVTVWDFLKTFGQELNLKEASVLTL----------------------------------------------------EEFETAVLWSSSNNKSKKSVHPLIAGLHLALLREALGRKADGSPCGEAEAVMTSMAPVRRILGDLLNPATWPEVIRRFAMAYLRYSRALFSRHGRGRGEWVDEGHPLATAVETLSRR------------------------GYGDLSSSETLCVLRWLSDVLMDSRSVRVKIAQHAERQSRATVGDRKKAEERDHLVAESLSRSLAHRGMVDETAIGXXXXXXXXXXXXXKPEGNERVAEERIEQAASAVVGGDTAGTAASGTPLTLKEKEALVSARAEEKRSAVRREALGWDREFNRYWWFGGGPSEVIHVEEKGGDVWGQYRSQQEVDALMDSQHPRGKRGAPLRRRLCQSKDEMQVG 764
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BLAST of mRNA_P-wetherbeei_contig1939.1.2 vs. uniprot
Match: I1IXZ7_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IXZ7_BRADI)

HSP 1 Score: 72.0 bits (175), Expect = 4.890e-9
Identity = 61/198 (30.81%), Postives = 95/198 (47.98%), Query Frame = 2 
Query: 2186 YAELPAAHKLALLRWLTDEVVDSAAVRQRVDEQVDQRNALLMNRRKAEYTEREL----MRAMEAGELRSDGQAVSRRELRNAEEVRRRAVEQ-IAHTSRLWN-----------------IRREPLGLDADYNCYWAFPSDPTRIFIEPQGGGEWMQYVYKEELLQLRDSLHPRGKREGALRRVLEDNLERLLAGLASR 2713
            Y  +    KL +LR L DE + ++AV+++++E++DQ+ AL+  +R+     +E     M  +   E+     A +  E  N + V +   E+ IA  S+  +                 IR  PLG D  YN YW F  +  R+F+E     EW  Y  KEEL  L  SL+ +G RE AL+R LE   +++   L  R
Sbjct:  390 YGLVHTGRKLQILRELVDEAIATSAVKEKLEERIDQQQALVAEKREVIRKNKEEQKLNMEGVTKNEMNQTHAAQNGNESANGQPVGKEGKERKIASASKTGDGKLYLRRHLETEMVDQSIRTSPLGKDRLYNRYWFFRRE-GRLFVENADSEEWGYYSTKEELDALIGSLNIKGIRERALKRQLEKFYDKISNALEKR 586
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BLAST of mRNA_P-wetherbeei_contig1939.1.2 vs. uniprot
Match: UPI001F5CEF41 (DDT domain-containing protein DDB_G0282237-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CEF41)

HSP 1 Score: 69.3 bits (168), Expect = 3.330e-8
Identity = 62/201 (30.85%), Postives = 99/201 (49.25%), Query Frame = 2 
Query: 2186 YAELPAAHKLALLRWLTDEVVDSAAVRQRVDEQVDQRNALLMNRRKAEY-------------TERELMR--AMEAGELRSDGQAVSR--RELRNAEE--------VRRRAVEQIAHTSRLWNIRREPLGLDADYNCYWAFPSDPTRIFIEPQGGGEWMQYVYKEELLQLRDSLHPRGKREGALRRVLEDNLERLLAGLASR 2713
            Y  +    KL +LR L DE + + A ++R++E+++Q+ A++  +R+A               TE+E+    ++  G    +GQ V++  +E  NA          +RR   +++   S    +R  PLG D  YN YW F  +  RIF+E     EW  Y  KEEL  L  SL+ +G RE AL++ LE   E++   L  R
Sbjct:  388 YGLVDTGVKLQILRELVDEAIATTAFKERLEERINQQQAVVAEKREAARKNKEEQKLNMEGATEKEMNHTDSVPDGNESVNGQLVAKEGKEKENAPSKNEDGKLYLRRHLAKEMLDQS----VRTSPLGKDRLYNRYWFFRRE-GRIFVESADSKEWGYYSTKEELAALVGSLNIKGIRERALKQQLEKFYEKISNALEKR 583
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BLAST of mRNA_P-wetherbeei_contig1939.1.2 vs. uniprot
Match: A0A5J9SMR9_9POAL (WAC domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9SMR9_9POAL)

HSP 1 Score: 68.6 bits (166), Expect = 6.090e-8
Identity = 58/201 (28.86%), Postives = 88/201 (43.78%), Query Frame = 2 
Query: 2186 YAELPAAHKLALLRWLTDEVVDSAAVRQRVDEQVDQRNALLMNRRK-------------------------AEYTERELMRAMEAGELRSDGQAVSRRELRNAEEVRRRAVEQIAHTSRLWNIRREPLGLDADYNCYWAFPSDPTRIFIEPQGGGEWMQYVYKEELLQLRDSLHPRGKREGALRRVLEDNLERLLAGLASR 2713
            Y  L    KL +LR L DE + ++AVR+++DE++DQR A    +R+                         A     E +     G+   D +  S  +    +   RR ++       +W     PLG D  YN YW F S+  R+F+E  G  EW  Y  KEEL  L  S + +G RE AL++ L  + +++   L  R
Sbjct:  447 YGLLDTGLKLKMLRVLVDEAIATSAVREKIDERIDQRQAFAAAKREDARKNGKEQKLNMEGVAENGINQSGATQNGNECVEGQHVGKEHKDVKCFSSSKKGEGKMYLRRHLDTEMQHQSVWP---SPLGKDRFYNRYWFFGSE-GRLFVEGAGSKEWGYYSTKEELDALLGSFNVKGIRERALKQQLNRSYDQISNALERR 643
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BLAST of mRNA_P-wetherbeei_contig1939.1.2 vs. uniprot
Match: A0A5J9TT04_9POAL (WAC domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9TT04_9POAL)

HSP 1 Score: 67.8 bits (164), Expect = 9.720e-8
Identity = 56/194 (28.87%), Postives = 86/194 (44.33%), Query Frame = 2 
Query: 2186 YAELPAAHKLALLRWLTDEVVDSAAVRQRVDEQVDQRNALLMNRRK-------------------------AEYTERELMRAMEAGELRSDGQAVSRRELRNAEEVRRRAVEQIAHTSRLWNIRREPLGLDADYNCYWAFPSDPTRIFIEPQGGGEWMQYVYKEELLQLRDSLHPRGKREGALRRVLEDNLERL 2692
            Y  L    KL +LR L DE + ++AVR+++DE++DQR A    +R+                         A     E +     G+   D +  S  +    +   RR ++       +W     PLG D  YN YW F S+  R+F+E  G  EW  Y  KEEL  L  S + +G RE AL++ L  + +++
Sbjct:  414 YGLLDTGLKLKMLRVLVDEAIATSAVREKIDERIDQRQAFAAAKREDARKNGKEQKLNMEGVAENGINQSGATQNGNECVEGQHVGKEHKDVKCFSSSKKGEGKMYLRRHLDTEMQHQSVWP---SPLGKDRFYNRYWFFGSE-GRLFVEGAGSKEWGYYSTKEELDALLGSFNVKGIRERALKQQLNRSYDQI 603
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BLAST of mRNA_P-wetherbeei_contig1939.1.2 vs. uniprot
Match: A0A0E0P9I8_ORYRU (DDT domain-containing protein n=10 Tax=Oryza TaxID=4527 RepID=A0A0E0P9I8_ORYRU)

HSP 1 Score: 67.4 bits (163), Expect = 1.160e-7
Identity = 58/181 (32.04%), Postives = 88/181 (48.62%), Query Frame = 2 
Query: 2186 YAELPAAHKLALLRWLTDEVVDSAAVRQRVDEQVDQRNALLMNRR------KAEY-------TERELMRAMEAGELRSD--GQAVSRRELRNAEEVRRRAVEQIAHTS---RLWNIRREPLGLDADYNCYWAFPSDPTRIFIEPQGGGEWMQYVYKEELLQLRDSLHPRGKREGALRRVLE 2674
            Y  +  A KL +LR L DE + ++AVRQ +DE++DQ+ A+  ++R      K E+       TE+E+ +   A  +  +  GQ V +           +  E   H        +++   LG D  YN YW F  +  R+F+E     EW  Y  KEEL  L  SL+ +G RE AL+R L+
Sbjct:  320 YGLVHTAVKLKILRELVDEAITTSAVRQNIDEKIDQQQAIAASKRELARNKKEEHKLAMEGVTEKEMSQTDAAENVNGNVNGQVVEKEGKEKKNIYANKMGEGKRHLGTEMEKQSVQSNSLGKDRYYNRYWFFRHE-GRLFVESADSKEWGYYSTKEELDALIGSLNVKGIRERALKRQLD 499
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BLAST of mRNA_P-wetherbeei_contig1939.1.2 vs. uniprot
Match: A0A6G1BXX5_9ORYZ (Uncharacterized protein n=2 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1BXX5_9ORYZ)

HSP 1 Score: 66.6 bits (161), Expect = 2.150e-7
Identity = 55/185 (29.73%), Postives = 85/185 (45.95%), Query Frame = 2 
Query: 2186 YAELPAAHKLALLRWLTDEVVDSAAVRQRVDEQVDQRNALLMNRRKAEYTERELMRAMEAGELRSD---------------GQAVSRRELRNAEEVRRRAVEQIAHTSR-------LWNIRREPLGLDADYNCYWAFPSDPTRIFIEPQGGGEWMQYVYKEELLQLRDSLHPRGKREGALRRVLE 2674
            Y  +  A KL +LR L DE + ++AVRQ +DE++DQ+ A+  ++R+    ++E  +    G    +               GQ + +           +  +   HT R         +I+   LG D  YN YW F  +  R+F+E     EW  Y  KEEL  L  SL+ +G RE AL+R L+
Sbjct:  383 YGLVHTAVKLKILRELVDEAITTSAVRQNIDEKIDQQQAIAASKRELARNKKEEQKLSMEGVSEKEMSQTDASQNVNGSVNGQVLDKEGKEKKNIYANKTGDGKMHTGRHHGTEMEKQSIQSNSLGKDRFYNRYWFFRHE-GRLFVESADSKEWGYYSSKEELDALIGSLNVKGIRERALKRQLD 566
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BLAST of mRNA_P-wetherbeei_contig1939.1.2 vs. uniprot
Match: A0A1E5VH96_9POAL (DDT domain-containing protein n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5VH96_9POAL)

HSP 1 Score: 66.6 bits (161), Expect = 2.230e-7
Identity = 58/189 (30.69%), Postives = 91/189 (48.15%), Query Frame = 2 
Query: 2210 KLALLRWLTDEVVDSAAVRQRVDEQVDQRNALLMNRRKAEYTERELMR-----AMEAGELRSDG---------QAVSRRELRNAEEVRRRAVEQIAHTSR-------LWNIRREPLGLDADYNCYWAFPSDPTRIFIEPQGGGEWMQYVYKEELLQLRDSLHPRGKREGALRRVLEDNLERLLAGLASR 2713
            KL +LR L +E + ++A+R+++ E++DQ+ AL   +R++   ++E        AM+  E ++D          Q    +E ++   + R   E   H  R         +IR  PLG D   N YW F  +  R+F+E     EW  Y  KEEL  L  SL+ +G RE AL+R LE    ++   L  R
Sbjct:  392 KLKILRELVEEAIKTSAIREKLSERLDQKQALNATKRESTRKDKEEQNLNTDIAMKNEENQTDAVQEGNGSVDQLAKGKEEKDKSNISRSKTEGKRHLVRHLETEIEKLSIRSCPLGKDRHCNRYWFFRRE-GRLFVESADSREWGYYSTKEELDALMGSLNVKGIRERALKRQLEKFYNKISNALEKR 579
[Close]
BLAST of mRNA_P-wetherbeei_contig1939.1.2 vs. uniprot
Match: A0A0D3FW62_9ORYZ (DDT domain-containing protein n=6 Tax=Oryza TaxID=4527 RepID=A0A0D3FW62_9ORYZ)

HSP 1 Score: 65.9 bits (159), Expect = 3.630e-7
Identity = 57/181 (31.49%), Postives = 88/181 (48.62%), Query Frame = 2 
Query: 2186 YAELPAAHKLALLRWLTDEVVDSAAVRQRVDEQVDQRNALLMNRR------KAEY-------TERELMRAMEAGELRSD--GQAVSRRELRNAEEVRRRAVEQIAHTS---RLWNIRREPLGLDADYNCYWAFPSDPTRIFIEPQGGGEWMQYVYKEELLQLRDSLHPRGKREGALRRVLE 2674
            Y  +  A KL +L+ L DE + ++AVRQ +DE++DQ+ A+  ++R      K E+       TE+E+ +   A  +  +  GQ V +           +  E   H        +++   LG D  YN YW F  +  R+F+E     EW  Y  KEEL  L  SL+ +G RE AL+R L+
Sbjct:  342 YGLVHTAVKLKILQELVDEAITTSAVRQNIDEKIDQQQAIAASKRELARNKKEEHKLAMEGVTEKEMSQTDAAENVNGNVNGQVVEKEGKEKKNIYANKMGEGKRHLGTEMEKQSVQSNSLGKDRYYNRYWYFRHE-GRLFVESADSKEWGYYSTKEELDALIGSLNVKGIRERALKRQLD 521
[Close]
BLAST of mRNA_P-wetherbeei_contig1939.1.2 vs. uniprot
Match: A0A7C9CU05_OPUST (DDT domain-containing protein n=3 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9CU05_OPUST)

HSP 1 Score: 65.9 bits (159), Expect = 3.660e-7
Identity = 36/79 (45.57%), Postives = 45/79 (56.96%), Query Frame = 2 
Query: 2477 IRREPLGLDADYNCYWAFPSDPTRIFIEPQGGGEWMQYVYKEELLQLRDSLHPRGKREGALRRVLEDNLERLLAGLASR 2713
            IR  PLG D DYN YW F  D  R+F+E     +W  Y  KEEL  L  SL+P+G+RE AL++ LE    R+   L  R
Sbjct:  461 IRSNPLGKDRDYNRYWFFQRD-ERVFVESPDSKQWGYYSSKEELDALIGSLNPKGERERALKKQLEKFYARICKELQKR 538
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1939.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D8LRK0_ECTSI4.280e-2726.54Nucleosome/chromatin assembly factor group n=1 Tax... [more]
I1IXZ7_BRADI4.890e-930.81Uncharacterized protein n=1 Tax=Brachypodium dista... [more]
UPI001F5CEF413.330e-830.85DDT domain-containing protein DDB_G0282237-like n=... [more]
A0A5J9SMR9_9POAL6.090e-828.86WAC domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A5J9TT04_9POAL9.720e-828.87WAC domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A0E0P9I8_ORYRU1.160e-732.04DDT domain-containing protein n=10 Tax=Oryza TaxID... [more]
A0A6G1BXX5_9ORYZ2.150e-729.73Uncharacterized protein n=2 Tax=Oryza meyeriana va... [more]
A0A1E5VH96_9POAL2.230e-730.69DDT domain-containing protein n=1 Tax=Dichantheliu... [more]
A0A0D3FW62_9ORYZ3.630e-731.49DDT domain-containing protein n=6 Tax=Oryza TaxID=... [more]
A0A7C9CU05_OPUST3.660e-745.57DDT domain-containing protein n=3 Tax=Opuntia stre... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1939contigP-wetherbeei_contig1939:939..5971 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4537.OPUNC02G18470.1
PFAMsDDT,WAC_Acf1_DNA_bd,WHIM1,WSD
Model size3476
Max annot lvl35493|Streptophyta
KEGG koko:K11655
Hectar predicted targeting categoryother localisation
Exons7
Evalue2.94e-11
EggNOG OGsCOG5076@1|root,KOG1245@2759|Eukaryota,37MK0@33090|Viridiplantae,3G8TS@35493|Streptophyta,3KQ2S@4447|Liliopsida,3I5CI@38820|Poales
DescriptionWilliams-Beuren syndrome DDT (WSD), D-TOX E motif
Cds size3339
COG categoryB
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1939.1.2prot_P-wetherbeei_contig1939.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1939 939..5835 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186170.7947094-CDS-P-wetherbeei_contig1939:938..9861683186170.7947094-CDS-P-wetherbeei_contig1939:938..986Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1939 939..986 -
1683186170.8058078-CDS-P-wetherbeei_contig1939:1209..20371683186170.8058078-CDS-P-wetherbeei_contig1939:1209..2037Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1939 1210..2037 -
1683186170.81392-CDS-P-wetherbeei_contig1939:2220..23381683186170.81392-CDS-P-wetherbeei_contig1939:2220..2338Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1939 2221..2338 -
1683186170.8225896-CDS-P-wetherbeei_contig1939:2534..26831683186170.8225896-CDS-P-wetherbeei_contig1939:2534..2683Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1939 2535..2683 -
1683186170.831412-CDS-P-wetherbeei_contig1939:2974..38651683186170.831412-CDS-P-wetherbeei_contig1939:2974..3865Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1939 2975..3865 -
1683186170.8496795-CDS-P-wetherbeei_contig1939:4215..50641683186170.8496795-CDS-P-wetherbeei_contig1939:4215..5064Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1939 4216..5064 -
1683186170.8661816-CDS-P-wetherbeei_contig1939:5379..58351683186170.8661816-CDS-P-wetherbeei_contig1939:5379..5835Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1939 5380..5835 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186170.8771906-UTR-P-wetherbeei_contig1939:5835..59711683186170.8771906-UTR-P-wetherbeei_contig1939:5835..5971Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1939 5836..5971 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1939.1.2

>prot_P-wetherbeei_contig1939.1.2 ID=prot_P-wetherbeei_contig1939.1.2|Name=mRNA_P-wetherbeei_contig1939.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1113bp
MAGSFEAGMYSSVTAGVMGAEHGFAMPMSPTAGTMALRTTSTASSPDPVG
AASASPHGGGGGTFPPPRLIVGPSRPLTRHPPYIEMIKEAIHTLQDPQGS
TVLALNKWIEESIYGPLLNVAKFKYNVAKSIKDGLTSRVLVKNGQRLQLS
PAVASEVAAREKAREAKWKAESMGAVGGAHTDAAIVPLLSGRTRIRGAVG
MGPQVGQPAASQPAVPRPTYSNLGDSWRGIDEYDDDGAGEYISAFGLGGC
AVVDGGSNGDLSASAFDPPPTDNTYGCYGYGSVYGNSYGGSSYGSGSSYG
SNSGNYGGGGACGGNAYAGGNAYGGGGAFGSPVGVGVGVGAGGYAGHTTY
GANAFPVAGPHGYHPVHSHHGYPVPVPVPIPGAIVPGAVHGAAGPVGGAF
YGMGYPRPMVVPRPPEAAWPVEDRELEGMEAKLGTKTQLPARPKPTPLAL
SFAESALSKEVLSDLLFVWDFLRSFGSLLHLRPCSLDALYGAVSGGAASD
DVAAAAAAAFAADDVDHGSAASNGGAAGGEIPGGGASGSGANGRHGGGGG
SGGSSKGAAKIPPLLVAINMAMLRAALARRPDGSPVREAGAGHGSLVAAR
VLLGDVLNTATWPEVLRLFTRAQERYYRALYARRAGGASGWLTPGDCLAE
ALRRVSGDGGCVDDHGGGGGGSSGGDDGGGGVGYAELPAAHKLALLRWLT
DEVVDSAAVRQRVDEQVDQRNALLMNRRKAEYTERELMRAMEAGELRSDG
QAVSRRELRNAEEVRRRAVEQIAHTSRLWNIRREPLGLDADYNCYWAFPS
DPTRIFIEPQGGGEWMQYVYKEELLQLRDSLHPRGKREGALRRVLEDNLE
RLLAGLASRPLPGTVASDTVAAADGADASAAAATEDGDAGAAAAAVAAAT
ATAAVAVEDTPMGEASEAAAGEAAAGAPAGATAGATAEAMPADSGGGSGG
AAADGGAQEGGSAAAVVPLTEGATPAVMVDGDASNNGDNGASDDSAPTAP
SPPPTEARAADPAAVAADVMVVVGGADGHGAAEVAEGGAAASSSGGRGAG
NANGEYAGEGGGNAADAAEAAAASRKRQAAAAALDEPRRSQRRRSGQNEY
AGDYSGYSAYNPP
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mRNA from alignment at P-wetherbeei_contig1939:939..5971-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1939.1.2 ID=mRNA_P-wetherbeei_contig1939.1.2|Name=mRNA_P-wetherbeei_contig1939.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5033bp|location=Sequence derived from alignment at P-wetherbeei_contig1939:939..5971- (Phaeothamnion wetherbeei SAG_119_79)
GGAAAAACTTGAACCAGCTAGACGCGATTCCCAGGCTCAATATTCTTCAA
CGAACGAAAGGTGCTTTTAAGAGGAAGGGCGTGGTAAGGGAACACTCCTG
CGAGGCCAGCGCCCGGCTCTTCGGAACGGCGCGAGCATGGCGGGCTCCTT
CGAAGCGGGCATGTACTCGAGCGTCACCGCTGGGGTCATGGGTGCCGAGC
ACGGCTTCGCCATGCCCATGAGCCCCACAGCAGGCACGATGGCCCTTCGC
ACAACCTCGACCGCCTCGTCGCCCGACCCCGTTGGCGCCGCCTCCGCGTC
GCCGCACGGCGGCGGCGGTGGCACCTTCCCGCCGCCGCGGCTGATCGTCG
GCCCATCGCGGCCTTTGACGCGACACCCGCCGTACATCGAGATGATTAAA
GAAGCTATCCACACGCTGCAAGACCCCCAAGGGTCGACTGTGCTGGCGCT
CAACAAGTGGATCGAGGAGAGCATCTATGGGCCGCTGCTGAACGTGGCCA
AGTTTAAATACAACGTCGCCAAGTCCATCAAGGACGGCCTCACGAGCCGT
GTCTTGGTCAAGAATGGCCAGCGGCTCCAGCTCAGCCCCGCGGTGAGCGA
AAGAGAGAGCTCAGGACGTTCTCTTTTATGTGAAAAAACAGTGGCTCGTT
CAGCATTGGGGCATGCATCGTTAAGTGGTTAACCGACCTGGTCGTGAATT
TTGGAACCGCAGCGGAGCATGGTCGTTTCGTCTCGCAACGTGCAATCAGA
CATCTCTTATCAAACGGCAACGACATTTACAGCCCGCTATTCAATCGATG
CTTTCGCTGATGAGCGGTCATGGCGTTGCCTCCCTCTGGCTTTTCGCTAT
AGTTTTATAACGCAGCATGCATCGCCTTCCTTCTTTAATATCTCTCTAAC
CAAAAAGGTCGCCAGCGAAGTCGCGGCGCGCGAGAAGGCGCGGGAGGCGA
AGTGGAAGGCGGAGAGCATGGGCGCTGTCGGCGGGGCCCACACCGACGCC
GCCATCGTGCCGCTTTTGTCGGGCCGAACGCGGATCCGGGGCGCGGTCGG
CATGGGTCCGCAGGTCGGCCAGCCGGCAGCGTCGCAGCCGGCGGTCCCGC
GGCCGACCTATAGCAACCTCGGTGACAGCTGGCGGGGCATTGACGAGTAC
GACGATGACGGCGCCGGCGAATACATTTCCGCCTTTGGGCTCGGCGGCTG
CGCGGTGGTCGACGGCGGCAGCAATGGCGACCTCAGCGCCAGCGCCTTCG
ACCCACCGCCCACCGACAACACCTACGGCTGCTATGGCTACGGCAGCGTT
TATGGCAACAGTTACGGCGGCAGCAGCTATGGTAGTGGTAGCAGCTATGG
CAGTAACAGCGGCAACTACGGTGGGGGCGGCGCTTGTGGCGGCAATGCTT
ACGCTGGCGGCAATGCTTATGGTGGTGGTGGCGCCTTCGGCAGCCCGGTC
GGCGTCGGCGTCGGCGTCGGCGCCGGCGGCTACGCCGGCCATACCACCTA
CGGTGCCAATGCGTTTCCCGTCGCCGGCCCCCACGGCTACCATCCGGTTC
ACAGCCACCATGGCTACCCGGTTCCCGTCCCCGTGCCCATCCCCGGTGCG
ATTGTTCCTGGTGCCGTCCACGGCGCCGCCGGACCCGTCGGCGGCGCCTT
CTACGGGATGGGGTACCCTCGGCCAATGGTGGTTCCCCGGCCACCGGAGG
CCGCATGGCCCGTGGAAGACCGCGAGCTGGAGGGGATGGAGGCGAAGCTC
GGCACGGTGAGTCGTGGTTACATGCGGCGATGGTGGGGGTGATGGCGGCA
GCGGCGGTGACGGTGGCAGCGGCGGCGTCGGCAGGGCGGGGGCGGCGGCG
ATGGCAGCGGAGGAAAAACAACGCGAGAGCCGTCGGATCGCCTTCCTGTG
CCTTCTGCAGAGAAAAAGGCCCGTCCTTCTGTTGGTGGCGTTGCGTGGCT
TGTCTCATCGCCTCAATTGCGTCACAGAGTTGCTAGTATCCCATTTGGCT
TTGAGGTCTGCCTACACGCTGCTGACACCACACCGCATTTGTTCTCCCTT
CGCTTCTGCTTCTGTTACGACGCCGTACGATGCTCTGGCCCTGGGTGGCA
AAACAGAAGACTCAGCTGCCGGCACGACCAAAGCCGACGCCGTTGGCGCT
GTCCTTTGCTGAGAGCGCGCTCTCGAAGGAGGTCTTGAGCGACCTTCTGT
TCGTGTGGGACTTCCTCCGCTCCTTCGGATCCCTCCTGCACCTGCGGCCG
TGCTCGCTTGATGCGCTGTACGGTGCCGTCAGCGGCGGTGCAGCCAGCGA
CGACGTCGCAGCTGCTGCTGCTGCCGCTTTTGCGGCGGATGATGTCGACC
ACGGCAGTGCCGCCTCGAACGGCGGCGCTGCGGGCGGGGAAATCCCTGGC
GGCGGCGCGAGCGGTAGCGGCGCGAACGGCCGCCACGGCGGCGGCGGTGG
CAGCGGCGGGAGCAGCAAGGGCGCCGCGAAGATTCCGCCGCTCCTGGTCG
CCATCAACATGGCGATGCTGCGCGCGGCGCTCGCGCGGCGGCCGGACGGC
AGCCCCGTGCGGGAGGCGGGGGCGGGCCACGGCTCTCTTGTCGCCGCCCG
CGTCCTCCTGGGGGACGTCCTCAACACCGCCACGTGGCCCGAGGTCCTGC
GGCTCTTCACGCGGGCGCAGGAGCGCTACTATCGGGCGCTGTACGCGCGC
CGCGCCGGCGGCGCGAGCGGCTGGCTGACACCCGGCGACTGCCTGGCGGA
GGCGCTGCGGCGCGTGTCCGGCGACGGCGGCTGCGTTGACGACCATGGCG
GCGGCGGCGGCGGTAGCAGCGGCGGCGACGACGGTGGCGGCGGCGTCGGG
TACGCGGAGCTGCCCGCGGCGCATAAGCTTGCGCTGCTGCGGTGGCTGAC
GGACGAGGTGGTTGACTCGGCGGCGGTGCGTCAGCGCGTCGACGAGCAGG
TCGACCAGCGGAACGCGCTGCTGATGAACCGACGCAAGGCAGAATACGTG
AGTGAGAGTCAAATGATGGATTCGGTGCCTTGTGTGGGGTTGAATTGATT
GGCCTTGTATGGGCTTTTTAGTGCTGCTGGCGACCGCTGTAAGGAACGCA
CTGACGTTTGAAGCAAAGGGAACTGTTATTCTCCGTAGCAACGTGTTTGC
GCGGTGGGAGTGGTGCAATTTTCTTGCATCTGGTCTTCCGGCTTTCATCG
TGCGTCAAAAGTCCTCTCCTCCTTGTGCCGTTGTGGGTAGTGCTGAGTAA
ACTGTCTTCCCGCAACGGGCATGACCGAAATGATTCAGACGGAGCGGGAG
CTGATGCGAGCAATGGAGGCCGGCGAGCTGCGGTCCGATGGCCAGGCCGT
CAGCCGGCGGGAGCTGCGGAACGCCGAGGAGGTGCGGCGGCGGGCGGTAG
AGCAGATCGCGCACACGAGCAGGCTCTGGAACATTCGGTAAGTATCCTGA
CAGAACCAATATGAACGTTTTCACTTTTCCATAGTTCTAGTTATTTCTGT
GTTGTGTGCCGAACTTCCTGCCGTCTCTCAGGCGACGCAGTCGCTGCGAC
GCCGACACGGCTGACATGTTTGTTGGCTTCGCGCTGTCGGGTCTGTTCTC
GCCTCCCCTGCTTTCCCTTGTCAATGTCCGCAGTCGGGAGCCGCTGGGGC
TCGACGCCGACTACAATTGCTACTGGGCCTTCCCCAGCGACCCAACGCGC
ATCTTCATCGAGCCACAGGGCGGCGGGGAGTGGATGCAGTACGTCTACAA
GGTACGCATTCTCCAGTCTTGTTTCTGGTTTCGGCTGCTTCAAAGTGTCG
TTCATTTGAAAACTGTGTTCACGAATTTTTCCTATCATTCTTGGTGTTTG
TGGGCAGTGCCATGCTCGCAGAGAACGGAACAGATTCGGCTCACTAAAAT
GCCGCCAATCGACCCTATCTTTTCCCGAAAATAGGAGGAGCTGCTCCAGC
TGCGCGACAGCCTTCACCCACGGGGGAAGCGGGAGGGGGCTCTGCGCCGC
GTCCTCGAAGACAACCTCGAGCGGCTCCTGGCCGGCCTCGCCTCCCGCCC
GCTGCCCGGAACTGTCGCCAGCGACACTGTCGCTGCTGCCGACGGAGCCG
ATGCCAGCGCTGCTGCTGCGACAGAGGACGGCGACGCCGGAGCTGCTGCT
GCTGCCGTTGCCGCTGCCACAGCGACGGCCGCGGTGGCAGTGGAAGACAC
ACCGATGGGAGAGGCGTCGGAAGCAGCAGCAGGCGAGGCGGCGGCAGGAG
CGCCGGCGGGAGCGACGGCGGGAGCGACGGCGGAAGCGATGCCGGCGGAC
AGTGGCGGCGGTAGCGGTGGTGCTGCTGCTGACGGCGGAGCACAGGAGGG
CGGATCTGCGGCAGCCGTGGTGCCTTTGACGGAAGGCGCTACGCCGGCCG
TAATGGTGGACGGGGATGCCAGCAACAACGGCGATAACGGTGCATCAGAC
GACAGCGCACCTACGGCACCATCCCCTCCGCCGACTGAGGCACGGGCTGC
GGACCCGGCAGCGGTGGCAGCGGACGTAATGGTGGTGGTCGGTGGAGCGG
ACGGCCACGGCGCAGCTGAGGTGGCGGAAGGAGGCGCTGCTGCCAGCAGC
AGCGGCGGCCGCGGGGCTGGAAATGCTAACGGCGAGTACGCCGGTGAAGG
CGGCGGCAATGCTGCCGACGCCGCCGAGGCGGCAGCTGCGAGCAGGAAGC
GGCAGGCTGCGGCAGCCGCCCTCGACGAGCCGCGCAGGTCCCAACGAAGA
CGCTCCGGTCAGGTGTGTGTGCTGCCGCGGCAGTAGTATGCTGAAGCATG
GGAAGGGTTCCAGAGCATGGCGGACTTTGACAGGTCGATTTGCTTGATGC
CTTTATTGTGATTCCCCATTGATTTCTCGTCACTGATAGCAAGCGGAGCA
AGGCCGATCGCTCGTGCTAAATGTGGTCTCTCTACTGCCTCCTTTGTGGC
TCTCCATCCTTCCGCTGGTTGCGTCTTCGCCGCAGAATGAATATGCTGGC
GACTATTCCGGGTATAGCGCCTACAACCCGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1939:939..5971-

>mRNA_P-wetherbeei_contig1939.1.2 ID=mRNA_P-wetherbeei_contig1939.1.2|Name=mRNA_P-wetherbeei_contig1939.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=3339bp|location=Sequence derived from alignment at P-wetherbeei_contig1939:939..5971- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGGCTCCTTCGAAGCGGGCATGTACTCGAGCGTCACCGCTGGGGT
CATGGGTGCCGAGCACGGCTTCGCCATGCCCATGAGCCCCACAGCAGGCA
CGATGGCCCTTCGCACAACCTCGACCGCCTCGTCGCCCGACCCCGTTGGC
GCCGCCTCCGCGTCGCCGCACGGCGGCGGCGGTGGCACCTTCCCGCCGCC
GCGGCTGATCGTCGGCCCATCGCGGCCTTTGACGCGACACCCGCCGTACA
TCGAGATGATTAAAGAAGCTATCCACACGCTGCAAGACCCCCAAGGGTCG
ACTGTGCTGGCGCTCAACAAGTGGATCGAGGAGAGCATCTATGGGCCGCT
GCTGAACGTGGCCAAGTTTAAATACAACGTCGCCAAGTCCATCAAGGACG
GCCTCACGAGCCGTGTCTTGGTCAAGAATGGCCAGCGGCTCCAGCTCAGC
CCCGCGGTCGCCAGCGAAGTCGCGGCGCGCGAGAAGGCGCGGGAGGCGAA
GTGGAAGGCGGAGAGCATGGGCGCTGTCGGCGGGGCCCACACCGACGCCG
CCATCGTGCCGCTTTTGTCGGGCCGAACGCGGATCCGGGGCGCGGTCGGC
ATGGGTCCGCAGGTCGGCCAGCCGGCAGCGTCGCAGCCGGCGGTCCCGCG
GCCGACCTATAGCAACCTCGGTGACAGCTGGCGGGGCATTGACGAGTACG
ACGATGACGGCGCCGGCGAATACATTTCCGCCTTTGGGCTCGGCGGCTGC
GCGGTGGTCGACGGCGGCAGCAATGGCGACCTCAGCGCCAGCGCCTTCGA
CCCACCGCCCACCGACAACACCTACGGCTGCTATGGCTACGGCAGCGTTT
ATGGCAACAGTTACGGCGGCAGCAGCTATGGTAGTGGTAGCAGCTATGGC
AGTAACAGCGGCAACTACGGTGGGGGCGGCGCTTGTGGCGGCAATGCTTA
CGCTGGCGGCAATGCTTATGGTGGTGGTGGCGCCTTCGGCAGCCCGGTCG
GCGTCGGCGTCGGCGTCGGCGCCGGCGGCTACGCCGGCCATACCACCTAC
GGTGCCAATGCGTTTCCCGTCGCCGGCCCCCACGGCTACCATCCGGTTCA
CAGCCACCATGGCTACCCGGTTCCCGTCCCCGTGCCCATCCCCGGTGCGA
TTGTTCCTGGTGCCGTCCACGGCGCCGCCGGACCCGTCGGCGGCGCCTTC
TACGGGATGGGGTACCCTCGGCCAATGGTGGTTCCCCGGCCACCGGAGGC
CGCATGGCCCGTGGAAGACCGCGAGCTGGAGGGGATGGAGGCGAAGCTCG
GCACGAAGACTCAGCTGCCGGCACGACCAAAGCCGACGCCGTTGGCGCTG
TCCTTTGCTGAGAGCGCGCTCTCGAAGGAGGTCTTGAGCGACCTTCTGTT
CGTGTGGGACTTCCTCCGCTCCTTCGGATCCCTCCTGCACCTGCGGCCGT
GCTCGCTTGATGCGCTGTACGGTGCCGTCAGCGGCGGTGCAGCCAGCGAC
GACGTCGCAGCTGCTGCTGCTGCCGCTTTTGCGGCGGATGATGTCGACCA
CGGCAGTGCCGCCTCGAACGGCGGCGCTGCGGGCGGGGAAATCCCTGGCG
GCGGCGCGAGCGGTAGCGGCGCGAACGGCCGCCACGGCGGCGGCGGTGGC
AGCGGCGGGAGCAGCAAGGGCGCCGCGAAGATTCCGCCGCTCCTGGTCGC
CATCAACATGGCGATGCTGCGCGCGGCGCTCGCGCGGCGGCCGGACGGCA
GCCCCGTGCGGGAGGCGGGGGCGGGCCACGGCTCTCTTGTCGCCGCCCGC
GTCCTCCTGGGGGACGTCCTCAACACCGCCACGTGGCCCGAGGTCCTGCG
GCTCTTCACGCGGGCGCAGGAGCGCTACTATCGGGCGCTGTACGCGCGCC
GCGCCGGCGGCGCGAGCGGCTGGCTGACACCCGGCGACTGCCTGGCGGAG
GCGCTGCGGCGCGTGTCCGGCGACGGCGGCTGCGTTGACGACCATGGCGG
CGGCGGCGGCGGTAGCAGCGGCGGCGACGACGGTGGCGGCGGCGTCGGGT
ACGCGGAGCTGCCCGCGGCGCATAAGCTTGCGCTGCTGCGGTGGCTGACG
GACGAGGTGGTTGACTCGGCGGCGGTGCGTCAGCGCGTCGACGAGCAGGT
CGACCAGCGGAACGCGCTGCTGATGAACCGACGCAAGGCAGAATACACGG
AGCGGGAGCTGATGCGAGCAATGGAGGCCGGCGAGCTGCGGTCCGATGGC
CAGGCCGTCAGCCGGCGGGAGCTGCGGAACGCCGAGGAGGTGCGGCGGCG
GGCGGTAGAGCAGATCGCGCACACGAGCAGGCTCTGGAACATTCGTCGGG
AGCCGCTGGGGCTCGACGCCGACTACAATTGCTACTGGGCCTTCCCCAGC
GACCCAACGCGCATCTTCATCGAGCCACAGGGCGGCGGGGAGTGGATGCA
GTACGTCTACAAGGAGGAGCTGCTCCAGCTGCGCGACAGCCTTCACCCAC
GGGGGAAGCGGGAGGGGGCTCTGCGCCGCGTCCTCGAAGACAACCTCGAG
CGGCTCCTGGCCGGCCTCGCCTCCCGCCCGCTGCCCGGAACTGTCGCCAG
CGACACTGTCGCTGCTGCCGACGGAGCCGATGCCAGCGCTGCTGCTGCGA
CAGAGGACGGCGACGCCGGAGCTGCTGCTGCTGCCGTTGCCGCTGCCACA
GCGACGGCCGCGGTGGCAGTGGAAGACACACCGATGGGAGAGGCGTCGGA
AGCAGCAGCAGGCGAGGCGGCGGCAGGAGCGCCGGCGGGAGCGACGGCGG
GAGCGACGGCGGAAGCGATGCCGGCGGACAGTGGCGGCGGTAGCGGTGGT
GCTGCTGCTGACGGCGGAGCACAGGAGGGCGGATCTGCGGCAGCCGTGGT
GCCTTTGACGGAAGGCGCTACGCCGGCCGTAATGGTGGACGGGGATGCCA
GCAACAACGGCGATAACGGTGCATCAGACGACAGCGCACCTACGGCACCA
TCCCCTCCGCCGACTGAGGCACGGGCTGCGGACCCGGCAGCGGTGGCAGC
GGACGTAATGGTGGTGGTCGGTGGAGCGGACGGCCACGGCGCAGCTGAGG
TGGCGGAAGGAGGCGCTGCTGCCAGCAGCAGCGGCGGCCGCGGGGCTGGA
AATGCTAACGGCGAGTACGCCGGTGAAGGCGGCGGCAATGCTGCCGACGC
CGCCGAGGCGGCAGCTGCGAGCAGGAAGCGGCAGGCTGCGGCAGCCGCCC
TCGACGAGCCGCGCAGGTCCCAACGAAGACGCTCCGGTCAGAATGAATAT
GCTGGCGACTATTCCGGGTATAGCGCCTACAACCCGCCG
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