mRNA_P-wetherbeei_contig1938.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1938.1.2 vs. uniprot
Match: A0A6H5L555_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L555_9PHAE) HSP 1 Score: 229 bits (584), Expect = 1.440e-66 Identity = 119/240 (49.58%), Postives = 162/240 (67.50%), Query Frame = 2
Query: 584 RLWADTAAAVASSFCVAPIITIVDRSIVLTANGAASMGQSVQAGVRGMVQSPARFVLGKEFLWVWGLYGATFVAANMIATACDELQASSTLPKFFGTTAVNMPSCIAKDAAFARMFGAAGRAGAVPALSYALFTVRDCITIAAGFTLPESMSDSLRESVGWTKDVSDNVSQLLCPGLMQFITTPLHLLGLDLYNNPGGSFRPRCATVSKNYMPSLVLRFGRVGAAFGIGGVANKAIRDAL 1303
RL +D AAA +S V+P I+IVDR+I+ +A+G+ M SV G R + PA F+ +F+ + LYGAT++AAN I+T DE S T+PKF GTTA+NMP IAKD A ++FG G A VPA S+ALFTVRD T+AA FTLP MS ++ES G ++D SQL+ PGL+Q +TP+H+LGLDLYN+P S R R V ++MP++ +R R+G AFG+GG+ N +IR+ L
Sbjct: 63 RLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEYSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSARMQESFGVDSGMADVTSQLVSPGLVQVFSTPVHILGLDLYNHPRSSCRARLRVVQDSFMPAIAMRVARIGVAFGVGGLGNTSIRNML 302
BLAST of mRNA_P-wetherbeei_contig1938.1.2 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 223 bits (568), Expect = 6.090e-65 Identity = 121/248 (48.79%), Postives = 160/248 (64.52%), Query Frame = 2
Query: 563 GAFRVLRRLWADTAAAVASSFCVAPIITIVDRSIVLTANGAASMGQSVQAGVRGMVQSPARFVLGKEFLWVWGLYGATFVAANMIATACDELQASSTLPKFFGTTAVNMPSCIAKDAAFARMFGAAGRAGAVPALSYALFTVRDCITIAAGFTLPESMSDSLRESVGWTKDVSDNVSQLLCPGLMQFITTPLHLLGLDLYNNPGGSFRPRCATVSKNYMPSLVLRFGRVGAAFGIGGVANKAIRDALQ 1306
GA + +RL D AAA+A+S VAP ITIVDR+I+ A+GA +G ++ V+ P RFV+ +EFL ++GLY AT+V+AN I T C+ + + +PKF GTTAVNM CIAKD AFARMFG A A P S LF VRD +T+AA F P+ ++ L + + ++QL+CP +QFI+TPLHLLGLDLYNN G S R + V + Y+ S+ R GR+G AFGIGGV N RD L+
Sbjct: 12 GASALAKRLGIDLAAAMAASVSVAPFITIVDRAIIENASGARPLGVGLKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPA-AFPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLR 258
BLAST of mRNA_P-wetherbeei_contig1938.1.2 vs. uniprot
Match: A0A0P1AEL6_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEL6_PLAHL) HSP 1 Score: 216 bits (549), Expect = 3.700e-62 Identity = 112/248 (45.16%), Postives = 160/248 (64.52%), Query Frame = 2
Query: 563 GAFRVLRRLWADTAAAVASSFCVAPIITIVDRSIVLTANGAASMGQSVQAGVRGMVQSPARFVLGKEFLWVWGLYGATFVAANMIATACDELQASSTLPKFFGTTAVNMPSCIAKDAAFARMFGAAGRAGAVPALSYALFTVRDCITIAAGFTLPESMSDSLRESVGWTKDVSDNVSQLLCPGLMQFITTPLHLLGLDLYNNPGGSFRPRCATVSKNYMPSLVLRFGRVGAAFGIGGVANKAIRDALQ 1306
G+ +++ RL DT AA+A+S VAP ITIVDR+I+ A+GA +G+ ++ +++P RF+ +EF ++GLY AT+ AN++ + C+ S +PKFFGTTAVNM CIAKD AFARMFG GA P S LF VRD +T A F P+ ++ L ++ K + +QL+CP +QF++TPLHLLGLDLYNN G + R + + Y+ S++ R GR+G AFGIGGV N +R+ L+
Sbjct: 12 GSVKLVERLVIDTVAAIAASLGVAPFITIVDRAIIENASGARPLGRGLKELSIDFLKNPLRFIGKREFHLIFGLYTATYATANIVDSVCELADTDSQMPKFFGTTAVNMSLCIAKDRAFARMFGVIAP-GAFPLASIGLFAVRDSLTCGASFNAPKVLAKKLEDNQLMEKSSASTFAQLICPAAVQFVSTPLHLLGLDLYNNKGHAVTQRIGFIQREYVKSVLARIGRIGPAFGIGGVGNSYVRNTLR 258
BLAST of mRNA_P-wetherbeei_contig1938.1.2 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 214 bits (544), Expect = 3.570e-61 Identity = 111/237 (46.84%), Postives = 154/237 (64.98%), Query Frame = 2
Query: 596 DTAAAVASSFCVAPIITIVDRSIVLTANGAASMGQSVQAGVRGMVQSPARFVLGKEFLWVWGLYGATFVAANMIATACDELQASSTLPKFFGTTAVNMPSCIAKDAAFARMFGAAGRAGAVPALSYALFTVRDCITIAAGFTLPESMSDSLRESVGWTKDVSDNVSQLLCPGLMQFITTPLHLLGLDLYNNPGGSFRPRCATVSKNYMPSLVLRFGRVGAAFGIGGVANKAIRDALQ 1306
D +A +SF V+P ITIVDRSI+ A+G MG S++AG++ +V P F+ EFL ++G+Y AT+ AN + T C+ + S P+F T+AVNM SCIAKD AF RMFG++ A+P +YALFT+RD T+ A F LP +S+ L ++ G +K +D +Q+ CP +QF++TPLHL+GLDLYNNP + R R + Y S+ R GR+G AFGIGGV N A R L+
Sbjct: 40 DVLSAFGASFMVSPFITIVDRSIIQNASGVMQMGDSIRAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPM-ALPLSTYALFTIRDAGTVGASFNLPGPVSEWL-QAQGMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLR 274
BLAST of mRNA_P-wetherbeei_contig1938.1.2 vs. uniprot
Match: A0A3M6VQY3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQY3_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.110e-60 Identity = 112/245 (45.71%), Postives = 161/245 (65.71%), Query Frame = 2
Query: 563 GAFRVLRRLWADTAAAVASSFCVAPIITIVDRSIVLTANGAASMGQSVQAGVRGMVQSPARFVLGKEFLWVWGLYGATFVAANMIATACDELQASSTLPKFFGTTAVNMPSCIAKDAAFARMFGAAGRAGAVPALSYALFTVRDCITIAAGFTLPESMSDSLRESVGWTKDVSDNVSQLLCPGLMQFITTPLHLLGLDLYNNPGGSFRPRCATVSKNYMPSLVLRFGRVGAAFGIGGVANKAIRD 1297
G +++++L DTAAA+A+S VAP ITIVDR+I+ A+GA +G+ ++ +++P RFV +EF V+GLY AT++AAN + + C+ ++ + +PKF GTTAVNM CIAKD AFARMFG A A P S LF VRD +T AA F P+ ++ + ++ K + +QL+CP +QFI+TPLHLLGLDLYNN G + + V + Y+ S++ R GR+G AFG+GGV N R+
Sbjct: 13 GPAKLVKQLMVDTAAAMAASLGVAPFITIVDRAIIENASGARPLGRGIKELSISFLKNPLRFVGKREFHIVFGLYTATYMAANAVDSVCEYIETDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPA-AFPLASIGLFAVRDSMTCAASFNAPKVLAKKIEDNKLMDKSNAGTFAQLICPAAVQFISTPLHLLGLDLYNNKGHTMTQHASLVRREYVKSVLARVGRIGPAFGVGGVGNAYFRN 256
BLAST of mRNA_P-wetherbeei_contig1938.1.2 vs. uniprot
Match: A0A484DVU1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVU1_BRELC) HSP 1 Score: 209 bits (531), Expect = 1.440e-59 Identity = 110/245 (44.90%), Postives = 159/245 (64.90%), Query Frame = 2
Query: 572 RVLRRLWADTAAAVASSFCVAPIITIVDRSIVLTANGAASMGQSVQAGVRGMVQSPARFVLGKEFLWVWGLYGATFVAANMIATACDELQASSTLPKFFGTTAVNMPSCIAKDAAFARMFGAAGRAGAVPALSYALFTVRDCITIAAGFTLPESMSDSLRESVGWTKDVSDNVSQLLCPGLMQFITTPLHLLGLDLYNNPGGSFRPRCATVSKNYMPSLVLRFGRVGAAFGIGGVANKAIRDALQ 1306
++ ++L ADTAAA A+S VAP ITIVDR+I+ A+GA ++ + ++ ++ P RFV +EF ++GLY AT+V AN++ + C+ + + +PKFFG TAVNM CIAKD AFARMFG GA P S LF +RD +T A F P+ ++ ++ E + ++ +QLLCP +QF++TPLHLLGLDLYNN G + R + + Y+ S++ R GR+G AFGIGGV N R+ L+
Sbjct: 12 KLAKQLVADTAAATAASLGVAPFITIVDRAIIENASGARALSRGLKELSVEFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYAETDNQMPKFFGVTAVNMSLCIAKDRAFARMFGVIAP-GAFPLASIGLFAIRDSLTCGASFNAPKVLAKTIEEKGLMERSGANTFAQLLCPAAVQFVSTPLHLLGLDLYNNKGHAIGRRVNFIQREYVKSVLARVGRIGPAFGIGGVGNNYFRNTLR 255
BLAST of mRNA_P-wetherbeei_contig1938.1.2 vs. uniprot
Match: H3GH37_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH37_PHYRM) HSP 1 Score: 209 bits (531), Expect = 1.580e-59 Identity = 115/248 (46.37%), Postives = 159/248 (64.11%), Query Frame = 2
Query: 563 GAFRVLRRLWADTAAAVASSFCVAPIITIVDRSIVLTANGAASMGQSVQAGVRGMVQSPARFVLGKEFLWVWGLYGATFVAANMIATACDELQASSTLPKFFGTTAVNMPSCIAKDAAFARMFGAAGRAGAVPALSYALFTVRDCITIAAGFTLPESMSDSLRESVGWTKDVSDNVSQLLCPGLMQFITTPLHLLGLDLYNNPGGSFRPRCATVSKNYMPSLVLRFGRVGAAFGIGGVANKAIRDALQ 1306
GA ++ + L ADTAAA+A+S VAP ITIVDR+I+ A+GA +G+ ++ V+ P RFV +EF ++GLY AT++AAN+ TAC+ + + +PKF TTAVNM CIAKD AFARMFG A A P S LF VRD +T A F P+ ++ + + K + +QL+CP +Q ++TPLHLLGLDLYNN G + R + V + Y+ S++ R GR+G AFGIGGV N R+ L+
Sbjct: 12 GAAQLAKHLVADTAAAMAASLGVAPFITIVDRAIIENASGARPLGRGLRELSADFVRHPLRFVGKREFHLIFGLYTATYMAANVTDTACEYAEMDNQMPKFISTTAVNMSLCIAKDRAFARMFGVIAPA-AFPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDKGLMEKSGAATFAQLVCPAAVQLLSTPLHLLGLDLYNNQGHAVAKRVSFVKREYVKSVLARIGRIGPAFGIGGVGNTYFRNTLR 258
BLAST of mRNA_P-wetherbeei_contig1938.1.2 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD) HSP 1 Score: 209 bits (531), Expect = 1.630e-59 Identity = 112/244 (45.90%), Postives = 155/244 (63.52%), Query Frame = 2
Query: 575 VLRRLWADTAAAVASSFCVAPIITIVDRSIVLTANGAASMGQSVQAGVRGMVQSPARFVLGKEFLWVWGLYGATFVAANMIATACDELQASSTLPKFFGTTAVNMPSCIAKDAAFARMFGAAGRAGAVPALSYALFTVRDCITIAAGFTLPESMSDSLRESVGWTKDVSDNVSQLLCPGLMQFITTPLHLLGLDLYNNPGGSFRPRCATVSKNYMPSLVLRFGRVGAAFGIGGVANKAIRDALQ 1306
V + L D AAA A+SF V+P ITIVDR+I+ A+GA + ++ + V +P +FV +EF+ V+GLY +T+ +AN I T C+ +A + +PKF GTTAVNM CIAKD AFA+MFG + A P + LF +RD +T+ A F P++++ L G + ++QLLCP +QF++TPLHLLGLDLYNN G S R V + Y+ S V R GR+G AFGIGGV N R+ L+
Sbjct: 17 VAKNLAIDLAAAAAASFAVSPFITIVDRAIIENASGARPLAVGIKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPS-AFPIGAIGLFAIRDSLTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENLR 259
BLAST of mRNA_P-wetherbeei_contig1938.1.2 vs. uniprot
Match: A0A5D6XW10_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW10_9STRA) HSP 1 Score: 208 bits (530), Expect = 2.650e-59 Identity = 111/242 (45.87%), Postives = 150/242 (61.98%), Query Frame = 2
Query: 581 RRLWADTAAAVASSFCVAPIITIVDRSIVLTANGAASMGQSVQAGVRGMVQSPARFVLGKEFLWVWGLYGATFVAANMIATACDELQASSTLPKFFGTTAVNMPSCIAKDAAFARMFGAAGRAGAVPALSYALFTVRDCITIAAGFTLPESMSDSLRESVGWTKDVSDNVSQLLCPGLMQFITTPLHLLGLDLYNNPGGSFRPRCATVSKNYMPSLVLRFGRVGAAFGIGGVANKAIRDALQ 1306
RRL AD AA +SF VAP ITIVDR+I+ A+GA +G ++ R + P FV +EF V+GLY AT+ +AN + CD + S +PKF TTAVNM CIAKD AFA+MFG + A P + LF VRD +T+AA F P++++ L++ G + +QLLCP L+QF++TPLHLLGLDLYN+ G V + Y+ S + R GR+G AFGIGG+ N R+ L+
Sbjct: 22 RRLAADVTAAATASFAVAPFITIVDRAIIENASGARPLGVGIRELARAFARRPLAFVRTREFAIVFGLYTATYASANATDSLCDFAERDSQMPKFAATTAVNMSLCIAKDRAFAQMFGVVAPS-AFPLAAVGLFAVRDSLTVAASFNAPKAVARKLQDDTGVDPARARTAAQLLCPALVQFVSTPLHLLGLDLYNHKGAGAAAHLRVVRREYLKSAIARIGRIGPAFGIGGIGNAHCRETLR 262
BLAST of mRNA_P-wetherbeei_contig1938.1.2 vs. uniprot
Match: A0A0L0FIC5_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FIC5_9EUKA) HSP 1 Score: 208 bits (529), Expect = 3.710e-59 Identity = 106/239 (44.35%), Postives = 153/239 (64.02%), Query Frame = 2
Query: 581 RRLWADTAAAVASSFCVAPIITIVDRSIVLTANGAASMGQSVQAGVRGMVQSPARFVLGKEFLWVWGLYGATFVAANMIATACDELQASSTLPKFFGTTAVNMPSCIAKDAAFARMFGAAGRAGAVPALSYALFTVRDCITIAAGFTLPESMSDSLRESVGWTKDVSDNVSQLLCPGLMQFITTPLHLLGLDLYNNPGGSFRPRCATVSKNYMPSLVLRFGRVGAAFGIGGVANKAIRD 1297
+R+ D AA+A++FCV+PIITIVDRSI++ A+GA +G ++ GV+ + +P F+ G +F +WGLY AT+V AN++ T + + S +PKF TTAVN CIAKD AF RMFG +P SY LF VRD TI A F+LP ++D + + G+ + + +QLLCP +Q ++TP+HLLGLDLYNN + R + V + Y+ S R R+ AFGIGG++N+ R+
Sbjct: 24 KRVAIDVGAALAAAFCVSPIITIVDRSIIMNASGAQKLGSALVGGVKQLTFTPTSFIRGLDFRLIWGLYTATYVVANVVDTVSELNKKDSAMPKFVVTTAVNGSLCIAKDRAFTRMFGTIAPTS-LPIGSYGLFAVRDMATIGASFSLPVKVADHMHDEYGYDRKRALFAAQLLCPMAVQLVSTPMHLLGLDLYNNKTATTSQRASFVGREYLKSTAARISRIAPAFGIGGISNRHFRE 261 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1938.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1938.1.2 >prot_P-wetherbeei_contig1938.1.2 ID=prot_P-wetherbeei_contig1938.1.2|Name=mRNA_P-wetherbeei_contig1938.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=323bp MGAKPQPKAAAVTKSGIRRPSARKGLGGRRCADKMWRCHRRSVRLNRCWCback to top mRNA from alignment at P-wetherbeei_contig1938:953..3213+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1938.1.2 ID=mRNA_P-wetherbeei_contig1938.1.2|Name=mRNA_P-wetherbeei_contig1938.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2261bp|location=Sequence derived from alignment at P-wetherbeei_contig1938:953..3213+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1938:953..3213+ >mRNA_P-wetherbeei_contig1938.1.2 ID=mRNA_P-wetherbeei_contig1938.1.2|Name=mRNA_P-wetherbeei_contig1938.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig1938:953..3213+ (Phaeothamnion wetherbeei SAG_119_79)back to top |