mRNA_P-wetherbeei_contig19348.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19348.1.1
Unique NamemRNA_P-wetherbeei_contig19348.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig19348.1.1 vs. uniprot
Match: UPI00074FE82D (RING finger protein 26 n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FE82D)

HSP 1 Score: 56.2 bits (134), Expect = 4.550e-8
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 1 
Query:    1 CVVCQDEEKNALFLSCGHLCVCEDCADLIEQ--SGKRQCPLCR 123
            CV+CQD+ K  L L C HLC+CE+C +++ Q  S +R CPLCR
Sbjct:  435 CVICQDQTKTVLLLPCRHLCLCEECTEILLQQASYQRNCPLCR 477
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BLAST of mRNA_P-wetherbeei_contig19348.1.1 vs. uniprot
Match: A0A091HLQ1_CALAN (RING finger protein 26 (Fragment) n=1 Tax=Calypte anna TaxID=9244 RepID=A0A091HLQ1_CALAN)

HSP 1 Score: 55.8 bits (133), Expect = 5.780e-8
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 1 
Query:    1 CVVCQDEEKNALFLSCGHLCVCEDCADLIEQSG--KRQCPLCR 123
            CV+CQD+ K  L L C HLC+C+DC +++ Q    +R CPLCR
Sbjct:  254 CVICQDQTKTVLLLPCRHLCLCQDCTEVLLQQAIYQRNCPLCR 296
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BLAST of mRNA_P-wetherbeei_contig19348.1.1 vs. uniprot
Match: A0A7S2J8P9_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2J8P9_9DINO)

HSP 1 Score: 54.3 bits (129), Expect = 5.790e-8
Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 1 
Query:    1 CVVCQDEEKNALFLSCGHLCVCEDCADLIEQSGKRQCPLCR 123
            CVVC ++ K   FL CGH+ VC+ CADLI  S   +CP CR
Sbjct:   99 CVVCSEQRKQVAFLPCGHVAVCQACADLIIASADHRCPNCR 139
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BLAST of mRNA_P-wetherbeei_contig19348.1.1 vs. uniprot
Match: A0A8D0EBN7_9SAUR (Ring finger protein 26 n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0EBN7_9SAUR)

HSP 1 Score: 55.8 bits (133), Expect = 6.210e-8
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 1 
Query:    1 CVVCQDEEKNALFLSCGHLCVCEDCADLIEQSG--KRQCPLCR 123
            CV+CQD+ K  L L C HLC+CE+C +++ Q    +R CPLCR
Sbjct:  347 CVICQDQTKTVLLLPCRHLCLCEECTEILLQQAIYQRNCPLCR 389
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BLAST of mRNA_P-wetherbeei_contig19348.1.1 vs. uniprot
Match: A0A7K5A9H4_9AVES (RNF26 ligase (Fragment) n=2 Tax=Centropus TaxID=57401 RepID=A0A7K5A9H4_9AVES)

HSP 1 Score: 55.8 bits (133), Expect = 6.220e-8
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 1 
Query:    1 CVVCQDEEKNALFLSCGHLCVCEDCADLIEQSG--KRQCPLCR 123
            CV+CQD+ K  + L C HLC+CEDC +++ Q    +R CPLCR
Sbjct:  430 CVICQDQTKTVVLLPCRHLCLCEDCTEVLLQQAVYQRNCPLCR 472
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BLAST of mRNA_P-wetherbeei_contig19348.1.1 vs. uniprot
Match: UPI0011C40E14 (E3 ubiquitin-protein ligase RNF26 n=1 Tax=Calypte anna TaxID=9244 RepID=UPI0011C40E14)

HSP 1 Score: 55.8 bits (133), Expect = 6.220e-8
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 1 
Query:    1 CVVCQDEEKNALFLSCGHLCVCEDCADLIEQSG--KRQCPLCR 123
            CV+CQD+ K  L L C HLC+C+DC +++ Q    +R CPLCR
Sbjct:  416 CVICQDQTKTVLLLPCRHLCLCQDCTEVLLQQAIYQRNCPLCR 458
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BLAST of mRNA_P-wetherbeei_contig19348.1.1 vs. uniprot
Match: K7FZK6_PELSI (RING-type domain-containing protein n=2 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7FZK6_PELSI)

HSP 1 Score: 55.8 bits (133), Expect = 6.220e-8
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 1 
Query:    1 CVVCQDEEKNALFLSCGHLCVCEDCADLIEQSG--KRQCPLCR 123
            CV+CQD+ K  L L C HLC+CE+C +++ Q    +R CPLCR
Sbjct:  382 CVICQDQTKTVLLLPCRHLCLCEECTEILLQQAIYQRNCPLCR 424
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BLAST of mRNA_P-wetherbeei_contig19348.1.1 vs. uniprot
Match: L8GSR8_ACACA (Htype lectin domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSR8_ACACA)

HSP 1 Score: 55.5 bits (132), Expect = 8.510e-8
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 1 
Query:    1 CVVCQDEEKNALFLSCGHLCVCEDCADLIEQSG-KRQCPLCR 123
            C VC D E N  F+ CGHL VC+DCA+L+   G KR+CP+C+
Sbjct:  410 CKVCMDAEINICFVPCGHLAVCQDCANLLTGKGNKRECPICK 451
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BLAST of mRNA_P-wetherbeei_contig19348.1.1 vs. uniprot
Match: UPI000528D7DC (RING finger protein 26 n=1 Tax=Buceros rhinoceros silvestris TaxID=175836 RepID=UPI000528D7DC)

HSP 1 Score: 54.3 bits (129), Expect = 9.870e-8
Identity = 21/43 (48.84%), Postives = 30/43 (69.77%), Query Frame = 1 
Query:    1 CVVCQDEEKNALFLSCGHLCVCEDCADLIEQSG--KRQCPLCR 123
            CV+CQD+ K  L L C HLC+C++C +++ Q    +R CPLCR
Sbjct:  134 CVICQDQTKTVLLLPCRHLCLCQECTEVLLQQAIYQRNCPLCR 176
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BLAST of mRNA_P-wetherbeei_contig19348.1.1 vs. uniprot
Match: UPI0005293524 (LOW QUALITY PROTEIN: RING finger protein 26 n=1 Tax=Pterocles gutturalis TaxID=240206 RepID=UPI0005293524)

HSP 1 Score: 54.3 bits (129), Expect = 1.110e-7
Identity = 21/43 (48.84%), Postives = 30/43 (69.77%), Query Frame = 1 
Query:    1 CVVCQDEEKNALFLSCGHLCVCEDCADLIEQSG--KRQCPLCR 123
            CV+CQD+ K  L L C HLC+C++C +++ Q    +R CPLCR
Sbjct:  144 CVICQDQTKTVLLLPCRHLCLCQECTEVLLQQAIYQRNCPLCR 186
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19348.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00074FE82D4.550e-853.49RING finger protein 26 n=1 Tax=Gekko japonicus Tax... [more]
A0A091HLQ1_CALAN5.780e-851.16RING finger protein 26 (Fragment) n=1 Tax=Calypte ... [more]
A0A7S2J8P9_9DINO5.790e-853.66Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
A0A8D0EBN7_9SAUR6.210e-851.16Ring finger protein 26 n=1 Tax=Salvator merianae T... [more]
A0A7K5A9H4_9AVES6.220e-851.16RNF26 ligase (Fragment) n=2 Tax=Centropus TaxID=57... [more]
UPI0011C40E146.220e-851.16E3 ubiquitin-protein ligase RNF26 n=1 Tax=Calypte ... [more]
K7FZK6_PELSI6.220e-851.16RING-type domain-containing protein n=2 Tax=Pelodi... [more]
L8GSR8_ACACA8.510e-854.76Htype lectin domain containing protein n=1 Tax=Aca... [more]
UPI000528D7DC9.870e-848.84RING finger protein 26 n=1 Tax=Buceros rhinoceros ... [more]
UPI00052935241.110e-748.84LOW QUALITY PROTEIN: RING finger protein 26 n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19348contigP-wetherbeei_contig19348:619..741 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog40483.S8E684
PFAMsFYVE,zf-C3HC4_3
Model size123
Max annot lvl4751|Fungi
KEGG koko:K20804
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue2.68e-11
EggNOG OGsKOG4275@1|root,KOG4275@2759|Eukaryota,3ADZ2@33154|Opisthokonta,3P75V@4751|Fungi,3V456@5204|Basidiomycota,227F1@155619|Agaricomycetes,3H088@355688|Agaricomycetes incertae sedis
EC2.3.2.31
Descriptionnegative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis
Cds size123
COG categoryO
BRITEko00000,ko01000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186170.1042817-CDS-P-wetherbeei_contig19348:618..7411683186170.1042817-CDS-P-wetherbeei_contig19348:618..741Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19348 619..741 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19348.1.1prot_P-wetherbeei_contig19348.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19348 619..741 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19348.1.1

>prot_P-wetherbeei_contig19348.1.1 ID=prot_P-wetherbeei_contig19348.1.1|Name=mRNA_P-wetherbeei_contig19348.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=41bp
CVVCQDEEKNALFLSCGHLCVCEDCADLIEQSGKRQCPLCR
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mRNA from alignment at P-wetherbeei_contig19348:619..741-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19348.1.1 ID=mRNA_P-wetherbeei_contig19348.1.1|Name=mRNA_P-wetherbeei_contig19348.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=123bp|location=Sequence derived from alignment at P-wetherbeei_contig19348:619..741- (Phaeothamnion wetherbeei SAG_119_79)
TGCGTCGTGTGCCAGGACGAGGAGAAGAACGCGCTCTTTTTGTCCTGTGG
CCATTTATGTGTCTGTGAGGATTGCGCGGACCTTATTGAGCAGAGTGGCA
AACGGCAGTGCCCGCTGTGCCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19348:619..741-

>mRNA_P-wetherbeei_contig19348.1.1 ID=mRNA_P-wetherbeei_contig19348.1.1|Name=mRNA_P-wetherbeei_contig19348.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=123bp|location=Sequence derived from alignment at P-wetherbeei_contig19348:619..741- (Phaeothamnion wetherbeei SAG_119_79)
TGCGTCGTGTGCCAGGACGAGGAGAAGAACGCGCTCTTTTTGTCCTGTGG
CCATTTATGTGTCTGTGAGGATTGCGCGGACCTTATTGAGCAGAGTGGCA
AACGGCAGTGCCCGCTGTGCCGC
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