mRNA_P-wetherbeei_contig19300.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19300.1.1
Unique NamemRNA_P-wetherbeei_contig19300.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: A0A6I3ER82_9ACTN (Urease accessory protein UreG n=2 Tax=root TaxID=1 RepID=A0A6I3ER82_9ACTN)

HSP 1 Score: 344 bits (883), Expect = 3.600e-117
Identity = 178/208 (85.58%), Postives = 188/208 (90.38%), Query Frame = 1
Query:   40 MWAFGGAGTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAW 663
            MWAFG  GTRPLRIGIGGPVGSGKTALVAALCR+L  E STVV+TNDIFTTEDAEALRRM VL DDRI+PVETGACPHTAIRDDISANLDAVE LEA HAPV LT++ESGGDNLTAIFSRALVD+QIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLA +V A L VMDRDAKARRG+LPI FTSLV P GA+ VA WVRAQ+A W
Sbjct:    1 MWAFGVPGTRPLRIGIGGPVGSGKTALVAALCRLLATEFSTVVVTNDIFTTEDAEALRRMAVLADDRIVPVETGACPHTAIRDDISANLDAVEQLEALHAPVDLTIIESGGDNLTAIFSRALVDKQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLASLVRADLGVMDRDAKARRGELPICFTSLVEPVGAVEVAAWVRAQIARW 208          
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: UPI0020069652 (urease accessory protein UreG n=1 Tax=Aciditerrimonas ferrireducens TaxID=667306 RepID=UPI0020069652)

HSP 1 Score: 294 bits (753), Expect = 2.910e-97
Identity = 147/201 (73.13%), Postives = 173/201 (86.07%), Query Frame = 1
Query:   61 GTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAW 663
            G + LR+GIGGPVGSGKTALVA+LCR+L +E+  VV+TND++TTEDA+ LRR GVL  +RI+ V+TG CPHTAIRDDI+AN DA+E LE R     + L+ESGGDNLTAIFS+ALVDRQIFV+DVAGGDKVPRKGGPGVT ADLLV+NKTDLAP+VGA L+VM RDA+A+RG+LP  FTSLVGPEGA  VA W+RAQLAAW
Sbjct:   19 GRQTLRVGIGGPVGSGKTALVASLCRLLGEELELVVVTNDVYTTEDADFLRRRGVLPVERIVAVQTGCCPHTAIRDDIAANQDALEGLERRFPGADVALVESGGDNLTAIFSQALVDRQIFVVDVAGGDKVPRKGGPGVTRADLLVVNKTDLAPLVGADLDVMARDARAQRGELPTVFTSLVGPEGAEPVAGWLRAQLAAW 219          
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: D9WE37_9ACTN (Urease accessory protein UreG n=5 Tax=Streptomyces TaxID=1883 RepID=D9WE37_9ACTN)

HSP 1 Score: 294 bits (753), Expect = 3.690e-97
Identity = 154/226 (68.14%), Postives = 173/226 (76.55%), Query Frame = 1
Query:    1 HTHGFHDGQPDDAMWAFGGAGTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAWSTTPA 678
            HTHG    +PD           R LRIG+GGPVGSGKTA VAALCR LRDE+S  V+TNDI+T EDAE L R  VL  +RI  VETGACPHTAIRDDISANL+AVE LE    P+ L L+ESGGDNLTA FS+ LVD Q+FVIDVAGGD +PRKGGPGVTTADLLV+NKTDLAP VG+ LE M RDAK +RGDLP+ FTSLV PEG   +ADWVR +LAAW+  PA
Sbjct:   13 HTHGADPRRPDGTR--------RALRIGLGGPVGSGKTATVAALCRALRDELSIAVVTNDIYTREDAEFLLRNAVLPAERISAVETGACPHTAIRDDISANLEAVEDLEEGVGPLDLILVESGGDNLTATFSKGLVDAQVFVIDVAGGDDIPRKGGPGVTTADLLVVNKTDLAPYVGSDLERMARDAKEQRGDLPVAFTSLVAPEGVRPIADWVRERLAAWTAAPA 230          
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: A0A1H3SBZ8_9ACTN (Urease accessory protein UreG n=2 Tax=Asanoa TaxID=195964 RepID=A0A1H3SBZ8_9ACTN)

HSP 1 Score: 293 bits (749), Expect = 1.100e-96
Identity = 153/205 (74.63%), Postives = 168/205 (81.95%), Query Frame = 1
Query:   67 RPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAWSTTPAH 681
            R +RIGIGGPVGSGKTALVAALCR L  E+   V+TNDI+TTEDA+ LRR GVL DDRI  VETG CPHTAIRDDISANLDAVE LE R   + L L+ESGGDNLTA FS+ LVD QIFV+DVAGGDKVPRKGGPGVTTADLLVINKTDLAP+VGA L VM RDA+ARRGDLP  F SLVG  GA  VADWVR ++A  ++TP H
Sbjct:    6 RAVRIGIGGPVGSGKTALVAALCRALATELRLAVVTNDIYTTEDADFLRRAGVLPDDRIRAVETGCCPHTAIRDDISANLDAVEELEERLGALDLILVESGGDNLTATFSKGLVDHQIFVVDVAGGDKVPRKGGPGVTTADLLVINKTDLAPLVGADLGVMARDAQARRGDLPTVFLSLVGEPGAAPVADWVRDRVAEPASTPRH 210          
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: A0A7K1II44_9ACTN (Urease accessory protein UreG n=1 Tax=Nitriliruptoraceae bacterium ZYF776 TaxID=2604685 RepID=A0A7K1II44_9ACTN)

HSP 1 Score: 292 bits (748), Expect = 2.190e-96
Identity = 149/200 (74.50%), Postives = 168/200 (84.00%), Query Frame = 1
Query:   61 GTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAA 660
            G R LR+G+GGPVG+GKTAL+A LCR LR+  S  V+TNDIFTTEDAEALRR GVL D+RI+PVETG CPHTAIRDDI+ANLDAVEA EAR   + + L+ESGGDNLTAIFSRALVD Q+FV+DVAGGDKVPRKGGPGVT+ADLLVINKTDLAP+VGA LEVM RDA ARRGDLP  F SLVG E A  V DW+  ++ A
Sbjct:   21 GRRTLRVGVGGPVGTGKTALIAELCRTLRERWSLAVVTNDIFTTEDAEALRRQGVLPDERIVPVETGGCPHTAIRDDIAANLDAVEAFEARWPDLDVVLVESGGDNLTAIFSRALVDVQVFVVDVAGGDKVPRKGGPGVTSADLLVINKTDLAPLVGADLEVMRRDAAARRGDLPTVFLSLVGGERAQPVVDWLEGRIDA 220          
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: UPI001941B5B0 (Urease accessory protein UreG n=2 Tax=Actinoplanes TaxID=1865 RepID=UPI001941B5B0)

HSP 1 Score: 289 bits (739), Expect = 6.460e-95
Identity = 154/219 (70.32%), Postives = 170/219 (77.63%), Query Frame = 1
Query:    1 HTHGFHDGQPDDAMWAFGGAGTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLA 657
            HTH   D  P   +    G G R LRIGIGGPVGSGKTALVAALCR L +E+   V+TNDI+TTEDA+ L R GVL  DRI  VETG CPHTAIRDDISANLDAVE LE    P+ L L+ESGGDNLTA FS+ L+D+QIFV+DVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGA L VMDRDA+ARRG+LP  F SL     A AVADW+RA +A
Sbjct:   19 HTHPDSDVDPHAPL----GTGPRALRIGIGGPVGSGKTALVAALCRSLGEELRLAVVTNDIYTTEDADFLLRNGVLPADRIRAVETGCCPHTAIRDDISANLDAVEDLEEALGPLDLVLVESGGDNLTATFSKGLIDKQIFVVDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGADLSVMDRDARARRGELPTVFQSLTEDRNATAVADWIRALVA 233          
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: R4LM81_9ACTN (Urease accessory protein UreG n=18 Tax=Micromonosporaceae TaxID=28056 RepID=R4LM81_9ACTN)

HSP 1 Score: 288 bits (736), Expect = 1.610e-94
Identity = 150/200 (75.00%), Postives = 163/200 (81.50%), Query Frame = 1
Query:   61 GTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAA 660
            G R LRIGIGGPVGSGKTALVAALCR L  E+   V+TNDI+TTEDA+ L R GVL  DRI  VETG CPHTAIRDDISANLDAVE LEA   P+ L L+ESGGDNLTA FS+ L+DRQIFV+DVAGGDKVPRKGGPGVTTADLLVINKTDLAP+VGA L VMDRDA+ARRGDLP  F SL     A AVADW+R  +AA
Sbjct:   31 GPRALRIGIGGPVGSGKTALVAALCRALGGELRLAVVTNDIYTTEDADFLLRNGVLPADRIRAVETGCCPHTAIRDDISANLDAVEDLEATLGPLDLVLVESGGDNLTATFSKGLIDRQIFVVDVAGGDKVPRKGGPGVTTADLLVINKTDLAPLVGADLSVMDRDARARRGDLPTVFQSLTEDRSATAVADWIRGLVAA 230          
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: UPI001942309A (urease accessory protein UreG n=1 Tax=Actinoplanes ferrugineus TaxID=113564 RepID=UPI001942309A)

HSP 1 Score: 287 bits (734), Expect = 3.830e-94
Identity = 151/225 (67.11%), Postives = 168/225 (74.67%), Query Frame = 1
Query:    1 HTHGFHDGQPDDAMWAFGGAGTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAWSTTP 675
            H+H   D  P + +    GAG R LR+GIGGPVGSGKTALVAALCR L  EV   V+TNDI+TTEDA+ L R GVL  DR+  VETG CPHTAIRDDISANLDA+E LE    P+ L L+ESGGDNLTA FS+ L+DRQIFV+DVAGGDKVPRKGGPGVTTADLLVINKTDLAP VGA L VMDRDA+ RRGDLP  F SL    GA A A W+R  L +    P
Sbjct:   15 HSHPHPDSDPHEPL----GAGRRALRVGIGGPVGSGKTALVAALCRTLAAEVRLAVVTNDIYTTEDADFLLRNGVLPADRVRAVETGCCPHTAIRDDISANLDAIEELETTLGPLDLILVESGGDNLTATFSKGLIDRQIFVVDVAGGDKVPRKGGPGVTTADLLVINKTDLAPHVGADLTVMDRDARTRRGDLPTIFQSLTDDPGATAAAGWIRTHLRSGPRDP 235          
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: A0A0A8EDK7_9ACTN (Urease accessory protein UreG n=2 Tax=Streptomyces sp. 769 TaxID=1262452 RepID=A0A0A8EDK7_9ACTN)

HSP 1 Score: 286 bits (733), Expect = 4.140e-94
Identity = 152/227 (66.96%), Postives = 173/227 (76.21%), Query Frame = 1
Query:    1 HTHGFHDGQPDDAMWAFGGAGTR-PLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAWSTTPA 678
            H  GF +     A     G GTR  LRIG+GGPVG+GKTA VAALCR+LR+E S  V+TNDI+T EDAE LRR  VL  +RI+ VETGACPHTAIRDDISANL+AVE LE    P+ L L+ESGGDNLTA FSR LVD QIFVID AGGD +PRKGGPGVTTADLLV+NKTDLAP VG  L+ M RDAKA+RG+LP+ FT+L  P+G   VADWVRAQL  W+T  A
Sbjct:    5 HQDGFPERHTYSAAAPVRGDGTRRALRIGLGGPVGTGKTATVAALCRVLREEFSIAVVTNDIYTREDAEFLRREAVLPTERIVAVETGACPHTAIRDDISANLEAVEDLEESVGPLDLVLVESGGDNLTATFSRGLVDAQIFVIDTAGGDDIPRKGGPGVTTADLLVVNKTDLAPYVGVDLDGMARDAKAQRGELPVAFTALKQPDGVKPVADWVRAQLTHWTTATA 231          
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Match: A0A2U3C0Z3_9ACTN (Urease accessory protein UreG n=3 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A2U3C0Z3_9ACTN)

HSP 1 Score: 287 bits (735), Expect = 4.340e-94
Identity = 146/200 (73.00%), Postives = 165/200 (82.50%), Query Frame = 1
Query:   67 RPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFTTEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHAPVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTADLLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADWVRAQLAAWS 666
            R LR+G GGPVGSGKTA VAALCR+LRDE+S  V+TNDI+T EDAE L R  VL  +RI  VETGACPHTAIRDDISANL+A+E LE    P+ L L+ESGGDNLTA FSR LVD Q FVIDVAGGDK+PRKGGPGV+TADLLV+NKTDLAP+VGA LEVM RDAKA+RGDLP+ FTSL G +G   VA WVR +LAAW+
Sbjct:   51 RALRVGFGGPVGSGKTATVAALCRLLRDELSIGVVTNDIYTREDAEFLLRNAVLPPERITAVETGACPHTAIRDDISANLEAIEDLEEAVGPLDLVLVESGGDNLTATFSRGLVDAQAFVIDVAGGDKIPRKGGPGVSTADLLVVNKTDLAPLVGADLEVMARDAKAQRGDLPVVFTSLTGADGIAPVATWVRTRLAAWT 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19300.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I3ER82_9ACTN3.600e-11785.58Urease accessory protein UreG n=2 Tax=root TaxID=1... [more]
UPI00200696522.910e-9773.13urease accessory protein UreG n=1 Tax=Aciditerrimo... [more]
D9WE37_9ACTN3.690e-9768.14Urease accessory protein UreG n=5 Tax=Streptomyces... [more]
A0A1H3SBZ8_9ACTN1.100e-9674.63Urease accessory protein UreG n=2 Tax=Asanoa TaxID... [more]
A0A7K1II44_9ACTN2.190e-9674.50Urease accessory protein UreG n=1 Tax=Nitrilirupto... [more]
UPI001941B5B06.460e-9570.32Urease accessory protein UreG n=2 Tax=Actinoplanes... [more]
R4LM81_9ACTN1.610e-9475.00Urease accessory protein UreG n=18 Tax=Micromonosp... [more]
UPI001942309A3.830e-9467.11urease accessory protein UreG n=1 Tax=Actinoplanes... [more]
A0A0A8EDK7_9ACTN4.140e-9466.96Urease accessory protein UreG n=2 Tax=Streptomyces... [more]
A0A2U3C0Z3_9ACTN4.340e-9473.00Urease accessory protein UreG n=3 Tax=unclassified... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19300contigP-wetherbeei_contig19300:1..889 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog649831.L083_6043
Preferred nameureG
PFAMscobW
Model size889
Max annot lvl201174|Actinobacteria
KEGG koko:K03189
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003924,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111
Exons1
Evalue7.55e-96
EggNOG OGsCOG0378@1|root,COG0378@2|Bacteria,2GNUV@201174|Actinobacteria,4D91H@85008|Micromonosporales
DescriptionFacilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
Cds size648
COG categoryKO
BRITEko00000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186169.1333158-UTR-P-wetherbeei_contig19300:0..2021683186169.1333158-UTR-P-wetherbeei_contig19300:0..202Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig19300 1..202 -
1683186169.154012-UTR-P-wetherbeei_contig19300:850..8891683186169.154012-UTR-P-wetherbeei_contig19300:850..889Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig19300 851..889 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186169.1446528-CDS-P-wetherbeei_contig19300:202..8501683186169.1446528-CDS-P-wetherbeei_contig19300:202..850Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19300 203..850 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19300.1.1prot_P-wetherbeei_contig19300.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19300 203..850 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19300.1.1

>prot_P-wetherbeei_contig19300.1.1 ID=prot_P-wetherbeei_contig19300.1.1|Name=mRNA_P-wetherbeei_contig19300.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp
MWAFGGAGTRPLRIGIGGPVGSGKTALVAALCRILRDEVSTVVITNDIFT
TEDAEALRRMGVLDDDRIMPVETGACPHTAIRDDISANLDAVEALEARHA
PVALTLLESGGDNLTAIFSRALVDRQIFVIDVAGGDKVPRKGGPGVTTAD
LLVINKTDLAPMVGASLEVMDRDAKARRGDLPIEFTSLVGPEGAIAVADW
VRAQLAAWSTTPAHR*
back to top

mRNA from alignment at P-wetherbeei_contig19300:1..889-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19300.1.1 ID=mRNA_P-wetherbeei_contig19300.1.1|Name=mRNA_P-wetherbeei_contig19300.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=889bp|location=Sequence derived from alignment at P-wetherbeei_contig19300:1..889- (Phaeothamnion wetherbeei SAG_119_79)
CACACGCACGGCTTCCACGACGGGCAGCCCGACGACGCGATGTGGGCGTT CGGTGGGGCGGGCACTCGCCCCTTGCGCATCGGCATCGGCGGGCCGGTCG GCAGCGGCAAGACCGCGCTCGTCGCCGCGCTGTGCCGCATCCTGCGAGAC GAGGTGAGCACCGTCGTCATCACCAACGACATCTTCACCACGGAGGACGC CGAGGCGCTGCGCCGCATGGGCGTGCTCGACGACGACCGGATCATGCCGG TGGAGACCGGCGCCTGCCCGCACACCGCGATCCGCGACGACATCTCTGCC AACCTCGACGCCGTCGAGGCGCTCGAGGCGCGCCACGCGCCCGTCGCGCT GACGTTGCTGGAGAGCGGCGGCGACAACCTCACGGCGATCTTCAGTCGCG CGTTGGTCGATCGGCAGATCTTCGTGATCGACGTCGCCGGTGGCGACAAG GTGCCACGCAAGGGCGGCCCCGGCGTGACGACGGCCGACCTGCTGGTGAT CAACAAGACGGATCTGGCCCCGATGGTCGGTGCCTCGTTGGAGGTGATGG ACCGCGACGCCAAGGCGCGCCGTGGCGACCTACCGATCGAGTTCACCTCC CTCGTCGGCCCCGAAGGCGCCATCGCCGTCGCCGACTGGGTCCGAGCCCA GCTCGCCGCCTGGTCGACCACCCCCGCCCACCGATGACGCGGTGAAGGCT CGGACGGAGGTCGTCGTCGGGCTCGACTCGCGGGGGTGCTCGACGGCGCA CCGGCTGCACTGCGAGGCGCCGCTGCTGGTGCGCGTGGGCGACCGGGTCG ACGATCACCTCGAGCTGCTGCTGGTCGGCGGGGCAGCGGGGCCGCTCGGC GGCGACGAGCTGACGTTCGACCTGACAGTGGAGGACGGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig19300:1..889-

>mRNA_P-wetherbeei_contig19300.1.1 ID=mRNA_P-wetherbeei_contig19300.1.1|Name=mRNA_P-wetherbeei_contig19300.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig19300:1..889- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGGCGTTCGGTGGGGCGGGCACTCGCCCCTTGCGCATCGGCATCGG
CGGGCCGGTCGGCAGCGGCAAGACCGCGCTCGTCGCCGCGCTGTGCCGCA
TCCTGCGAGACGAGGTGAGCACCGTCGTCATCACCAACGACATCTTCACC
ACGGAGGACGCCGAGGCGCTGCGCCGCATGGGCGTGCTCGACGACGACCG
GATCATGCCGGTGGAGACCGGCGCCTGCCCGCACACCGCGATCCGCGACG
ACATCTCTGCCAACCTCGACGCCGTCGAGGCGCTCGAGGCGCGCCACGCG
CCCGTCGCGCTGACGTTGCTGGAGAGCGGCGGCGACAACCTCACGGCGAT
CTTCAGTCGCGCGTTGGTCGATCGGCAGATCTTCGTGATCGACGTCGCCG
GTGGCGACAAGGTGCCACGCAAGGGCGGCCCCGGCGTGACGACGGCCGAC
CTGCTGGTGATCAACAAGACGGATCTGGCCCCGATGGTCGGTGCCTCGTT
GGAGGTGATGGACCGCGACGCCAAGGCGCGCCGTGGCGACCTACCGATCG
AGTTCACCTCCCTCGTCGGCCCCGAAGGCGCCATCGCCGTCGCCGACTGG
GTCCGAGCCCAGCTCGCCGCCTGGTCGACCACCCCCGCCCACCGATGA
back to top