mRNA_P-wetherbeei_contig1930.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1930.2.1
Unique NamemRNA_P-wetherbeei_contig1930.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1930.2.1 vs. uniprot
Match: A0A835YUI9_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUI9_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.420e-40
Identity = 78/167 (46.71%), Postives = 110/167 (65.87%), Query Frame = 1
Query:    1 EDPIKEISALQLLGAAGSHPNVLAAQEALQDDGAVYLVTSYCGGGELHDFIL-GRTLAENEARPLFRQLAEGVAFLQSEDVRICHRDLSPENVLLRDDGAGDSEDLVIMDFGLALRVP-VDREGRPAVVASGGAVGKLHYMSPEVLTNQPFNGFSVDVWACGVILFM 495
            E+P  EI+A+QL+ A G HP++L    AL+D+  +YLV  +C GG+L D++  G  L E +ARPLFRQLA+G+AFLQ ED+ I HRD+S ENVL+ D  A     L++MDFG+++R+P  +  G  A++      GK  YMSPEV    PF+    DVWA GV+ ++
Sbjct:  112 ENPYDEIAAMQLIAARGGHPSILPITAALRDENTIYLVLPFCNGGDLFDYVNEGGGLTEEQARPLFRQLADGLAFLQREDIAILHRDMSLENVLMHDGAA-----LLVMDFGMSIRLPRAEEPGVRALIPPQTRRGKRSYMSPEVFAEMPFDA-KADVWALGVMCYV 272          
BLAST of mRNA_P-wetherbeei_contig1930.2.1 vs. uniprot
Match: A0A6H5JKI7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI7_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 1.410e-38
Identity = 78/170 (45.88%), Postives = 112/170 (65.88%), Query Frame = 1
Query:    1 EDPIKEISALQLLGAAGSHPNVLAAQEALQDDGAVYLVTSYCGGGELHDFIL--GRTLAENEARPLFRQLAEGVAFLQSEDVRICHRDLSPENVLLRDDGAGDSEDLVIMDFGLALRVPVDREGRPAVVASGGAVGKLHYMSPEVLTNQP---FNGFSVDVWACGVILFM 495
            EDP++E+SALQ L    SHPNVL   EAL D+ ++Y++  +  GGE+ D ++  GR   E+EAR L RQ+  G+  L+   V  CHRD+S EN++L D+G      L ++DFGLALR+P + +G    +   GA GK HY++PEVL +     F+GF+VDVWACG++LF+
Sbjct:    7 EDPLREVSALQYLP---SHPNVLTCTEALLDENSIYILMPFYSGGEVFDVLMDSGR-FEEDEARLLLRQVLTGLLHLKRHGV--CHRDVSLENLMLTDEGV-----LKLVDFGLALRIPQNEDGSARTIPPQGACGKPHYIAPEVLASSSKSGFDGFAVDVWACGILLFV 165          
BLAST of mRNA_P-wetherbeei_contig1930.2.1 vs. uniprot
Match: D8LLV2_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV2_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 1.450e-35
Identity = 76/171 (44.44%), Postives = 112/171 (65.50%), Query Frame = 1
Query:    1 EDPIKEISALQLLGAAGSHPNVLAAQEALQDDGAVYLVTSYCGGGELHDFIL--GRTLAENEARPLFRQLAEGVAFLQSEDVRICHRDLSPENVLLRDDGAGDSEDLVIMDFGLALRVPVDREGRPAVVASGGAVGKLHYMSPEVLTNQP----FNGFSVDVWACGVILFM 495
            EDP++E+SALQ L    SHPNVL   EAL D+ ++Y+V  +  GGE+ D ++  GR   E+EAR L RQ+ +G+  L+   V  CHRD+S EN++L ++G      + ++DFGLALR+P + +GR   +   G  GK HY++PEVL +      F+GF+VDVWA G++LF+
Sbjct:  144 EDPLREVSALQYLP---SHPNVLTCTEALLDENSIYIVMPFYSGGEVFDVLMDSGR-FEEDEARLLLRQVLDGLLHLKRHGV--CHRDVSLENLVLTEEGV-----VKLVDFGLALRIPQNEDGRARTIPPQGVCGKPHYIAPEVLASSSSKSGFDGFAVDVWASGILLFV 303          
BLAST of mRNA_P-wetherbeei_contig1930.2.1 vs. uniprot
Match: D7FTS8_ECTSI (SOS2 (SALT OVERLY SENSITIVE 2) kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS8_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 6.610e-35
Identity = 79/169 (46.75%), Postives = 109/169 (64.50%), Query Frame = 1
Query:    1 EDPIKEISALQLLGAAGSHPNVLAAQEALQDDGAVYLVTSYCGGGELHDFILGR-TLAENEARPLFRQLAEGVAFLQSEDVRICHRDLSPENVLLRDDGAGDSEDLVIMDFGLALRVPVDREGRPAVVASGGAVGKLHYMSPEVLTNQP---FNGFSVDVWACGVILFM 495
            EDP++E++ALQ L    SHPNVL   EAL D  ++Y+VT +  GGE+ D +  R    E EARPLFRQ+   +  L+   V  CHRD+S EN+LL D+G      + ++DFGLALR+P   +G   V+   G  GK  Y++PEVL++     F+GF+VDVWACGV+LF+
Sbjct:  152 EDPLREVAALQFLS---SHPNVLPCTEALWDSDSIYIVTPFYSGGEVFDALTDRGRYEEGEARPLFRQVLHALRHLKIHGV--CHRDVSLENLLL-DEG----NTVKLVDFGLALRIPQKPDGGARVLLPQGPCGKPFYIAPEVLSSSVSSGFDGFAVDVWACGVLLFV 310          
BLAST of mRNA_P-wetherbeei_contig1930.2.1 vs. uniprot
Match: A0A024GJ08_9STRA (Protein kinase domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GJ08_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.490e-34
Identity = 76/167 (45.51%), Postives = 102/167 (61.08%), Query Frame = 1
Query:    1 EDPIKEISALQLLGAAGSHPNVLAAQEALQDDGAVYLVTSYCGGGELHDFI-LGRTLAENEARPLFRQLAEGVAFLQSEDVRICHRDLSPENVLLRDDGAGDSEDLVIMDFGLALRVPVDREGRPAVVASGGAVGKLHYMSPEVLTNQ-PFNGFSVDVWACGVILFM 495
            E+P+ E++A Q L   G HP+VL     L D   +Y V  +C GGEL   +  G  + E+EAR  F Q+  G+++LQS    ICHRD+S ENVLL  D +       I+DFGLA+ +PVD  G    +   GAVGK+ YM PE+  NQ PFNGFS D+W+ GV+LF+
Sbjct:  125 ENPLVELAAQQYLSKPG-HPHVLTLIACLHDSNFIYAVLPFCNGGELFSIVESGGAMGESEARYWFSQILAGLSYLQSRF--ICHRDMSLENVLLHGDVSK------IIDFGLAIGIPVDAHGMTYSLPPAGAVGKIFYMPPEIYRNQVPFNGFSADIWSTGVMLFI 282          
BLAST of mRNA_P-wetherbeei_contig1930.2.1 vs. uniprot
Match: W7TKV7_9STRA (Protein kinase, catalytic domain protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKV7_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.340e-34
Identity = 77/177 (43.50%), Postives = 107/177 (60.45%), Query Frame = 1
Query:    1 EDPIKEISALQLLGAAGSHPNVLAAQEALQDDGAVYLVTSYCGGGELHDFILGRT--LAENEARPLFRQLAEGVAFLQSEDVRICHRDLSPENVLLRDDGAGDSEDLVIMDFGLALRVPV----------DREGRPAVVASGGAVGKLHYMSPEVLTNQPFNGFSVDVWACGVILFM 495
            E+PI E++ALQ++GA G H +V    E L+DD A+Y V+ +  GGEL   I  R   L E  AR  F Q+  G+AF+   D R+CHRD+S EN+L+      D +D VI+D G+ LRVP+          D E    ++   G  GK+ YM P VL ++ F+GF+VD+WACGVILF+
Sbjct:  138 ENPIDELAALQMVGAGGGHQHVQRLLECLEDDEAIYAVSPFYQGGELFAVIEARGGGLPEARARTFFSQILSGLAFMH--DRRLCHRDMSLENILV------DGQDGVIIDMGMCLRVPLPPALPPSHPDDPETPRVLLRKQGQCGKITYMDPVVLEDKDFDGFAVDMWACGVILFI 306          
BLAST of mRNA_P-wetherbeei_contig1930.2.1 vs. uniprot
Match: A0A4D9CSW9_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSW9_9STRA)

HSP 1 Score: 134 bits (336), Expect = 6.930e-34
Identity = 78/177 (44.07%), Postives = 108/177 (61.02%), Query Frame = 1
Query:    1 EDPIKEISALQLLGAAGSHPNVLAAQEALQDDGAVYLVTSYCGGGELHDFILGRT--LAENEARPLFRQLAEGVAFLQSEDVRICHRDLSPENVLLRDDGAGDSEDLVIMDFGLALRVPV----------DREGRPAVVASGGAVGKLHYMSPEVLTNQPFNGFSVDVWACGVILFM 495
            E+PI E++ALQ++GA G H +V    E L+DD A+Y V+ +  GGEL   I  R   L E  AR LF Q+  G+AF+   D R+CHRD+S EN+L+      D +D VI+D G+ LRVP+          D E    ++   G  GK+ YM P VL ++ F+GF+VD+WACGVILF+
Sbjct:  261 ENPIDELAALQMVGAGGGHQHVQRLLECLEDDEAIYAVSPFYQGGELFAVIEARGGGLPEARARTLFSQILSGLAFMH--DRRLCHRDMSLENILV------DGQDGVIIDMGMCLRVPLLPALPPSHPDDPETPRVLLRKQGQCGKITYMDPVVLEDKDFDGFAVDMWACGVILFI 429          
BLAST of mRNA_P-wetherbeei_contig1930.2.1 vs. uniprot
Match: F0W422_9STRA (Protein kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W422_9STRA)

HSP 1 Score: 134 bits (336), Expect = 8.070e-34
Identity = 77/167 (46.11%), Postives = 102/167 (61.08%), Query Frame = 1
Query:    1 EDPIKEISALQLLGAAGSHPNVLAAQEALQDDGAVYLVTSYCGGGELHDFI-LGRTLAENEARPLFRQLAEGVAFLQSEDVRICHRDLSPENVLLRDDGAGDSEDLVIMDFGLALRVPVDREGRPAVVASGGAVGKLHYMSPEVLTNQ-PFNGFSVDVWACGVILFM 495
            E+P+ E++A Q L   G HP VL     L D+  +Y V  +C GGEL   +  G  + ENEAR  F Q+  G+++LQS    ICHRD+S ENVLL  D +       I+DFGLA+ +PVD  G    +   GAVGK+ YM PE+  NQ PFNGFS D+W+ GV+LF+
Sbjct:  125 ENPLIELAAQQYLSDPG-HPYVLTLIACLHDNNFIYAVLPFCNGGELFSIVETGGAMGENEARYWFAQILAGLSYLQSRF--ICHRDMSLENVLLHGDISK------IIDFGLAIGIPVDAHGMTYSLPPAGAVGKIFYMPPEIYRNQVPFNGFSADIWSAGVMLFI 282          
BLAST of mRNA_P-wetherbeei_contig1930.2.1 vs. uniprot
Match: A0A835YRG4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG4_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.030e-33
Identity = 81/201 (40.30%), Postives = 112/201 (55.72%), Query Frame = 1
Query:    1 EDPIKEISALQLLGAAGSHPNVLAAQEALQDDGAVYLVTSYCGGGELHDFI-LGRTLAENE--------------------ARPLFRQLAEGVAFLQSEDVRICHRDLSPENVL---LRDDGAG------------DSEDLVIMDFGLALRVPVDREGRP-AVVASGGAVGKLHYMSPEVLTNQPFNGFSVDVWACGVILF 492
            E+P+ EI+A+QL+ A G HPN+L    AL+D  A+YL+T YC GG+L D++ +   L+E+E                    ARPLFRQLAE +AFLQ ED+ + HRD+S ENVL   +    AG            D   L +MDFG+++R+P        A++A     GK  YMSPEV    PF+    D+WA GV+L+
Sbjct:  114 ENPMDEIAAMQLIAARGGHPNILPITAALEDTTALYLITPYCDGGDLFDYVCMNGGLSEDERLESEHPEAVRARELPPLTRARPLFRQLAEALAFLQREDIAVVHRDMSLENVLAISVDPSAAGTMSSWVLQLVVHDGGSLFVMDFGMSVRLPPPPSADARALIAPQSQRGKAKYMSPEVFAEAPFDA-KADIWALGVMLY 313          
BLAST of mRNA_P-wetherbeei_contig1930.2.1 vs. uniprot
Match: A0A6H5K2Q5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2Q5_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 3.960e-33
Identity = 72/168 (42.86%), Postives = 107/168 (63.69%), Query Frame = 1
Query:    1 EDPIKEISALQLLGAAGSHPNVLAAQEALQDDGAVYLVTSYCGGGELHDFILGR-TLAENEARPLFRQLAEGVAFLQSEDVRICHRDLSPENVLLRDDGAGDSEDLVIMDFGLALRVPVDREGRPAVVASGGAVGKLHYMSPEVL---TNQPFNGFSVDVWACGVILF 492
            EDP+KE++ALQ L     HPNVL   EAL D+  +Y+VT +  GGE+ + +       E +AR LFRQ+ +G+  L+   V  CHRD+S EN+L  ++G      + ++DFGLALR+P   +G   ++   G  GK +YM+PEV+   T+  F+GF+VDVWACG+++F
Sbjct:  249 EDPLKEVAALQYLP---KHPNVLDCTEALLDENNMYIVTPFFSGGEVFNVLSASGQFEEGQARLLFRQVLDGLLHLKRHGV--CHRDVSLENLLFAEEGV-----VKLVDFGLALRIPQSEDGSARIIPPQGPCGKPYYMAPEVVASSTSSGFDGFAVDVWACGILVF 406          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1930.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YUI9_9STRA1.420e-4046.71Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5JKI7_9PHAE1.410e-3845.88Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LLV2_ECTSI1.450e-3544.44Serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
D7FTS8_ECTSI6.610e-3546.75SOS2 (SALT OVERLY SENSITIVE 2) kinase n=2 Tax=Ecto... [more]
A0A024GJ08_9STRA1.490e-3445.51Protein kinase domain-containing protein n=1 Tax=A... [more]
W7TKV7_9STRA4.340e-3443.50Protein kinase, catalytic domain protein n=2 Tax=N... [more]
A0A4D9CSW9_9STRA6.930e-3444.07Protein kinase domain-containing protein n=1 Tax=N... [more]
F0W422_9STRA8.070e-3446.11Protein kinase putative n=1 Tax=Albugo laibachii N... [more]
A0A835YRG4_9STRA1.030e-3340.30Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5K2Q5_9PHAE3.960e-3342.86Protein kinase domain-containing protein n=2 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1930contigP-wetherbeei_contig1930:5437..6220 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FTS8
PFAMsPkinase
Model size498
Max annot lvl2759|Eukaryota
KEGG rclassRC01978
KEGG koko:K03644
KEGG ReactionR07767,R07768
KEGG Pathwayko00785,ko01100,map00785,map01100
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.08e-35
EggNOG OGsKOG0583@1|root,KOG0583@2759|Eukaryota
EC2.8.1.8
Descriptionprotein serine/threonine kinase activity
Cds size498
COG categoryG
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186169.0934365-CDS-P-wetherbeei_contig1930:5436..56901683186169.0934365-CDS-P-wetherbeei_contig1930:5436..5690Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1930 5437..5690 +
1683186169.1054566-CDS-P-wetherbeei_contig1930:5976..62201683186169.1054566-CDS-P-wetherbeei_contig1930:5976..6220Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1930 5977..6220 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1930.2.1prot_P-wetherbeei_contig1930.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1930 5437..6220 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1930.2.1

>prot_P-wetherbeei_contig1930.2.1 ID=prot_P-wetherbeei_contig1930.2.1|Name=mRNA_P-wetherbeei_contig1930.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
EDPIKEISALQLLGAAGSHPNVLAAQEALQDDGAVYLVTSYCGGGELHDF
ILGRTLAENEARPLFRQLAEGVAFLQSEDVRICHRDLSPENVLLRDDGAG
DSEDLVIMDFGLALRVPVDREGRPAVVASGGAVGKLHYMSPEVLTNQPFN
GFSVDVWACGVILFM*
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mRNA from alignment at P-wetherbeei_contig1930:5437..6220+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1930.2.1 ID=mRNA_P-wetherbeei_contig1930.2.1|Name=mRNA_P-wetherbeei_contig1930.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=784bp|location=Sequence derived from alignment at P-wetherbeei_contig1930:5437..6220+ (Phaeothamnion wetherbeei SAG_119_79)
GAAGACCCCATCAAGGAAATTTCTGCCCTCCAACTCCTTGGCGCCGCCGG CAGCCACCCCAACGTGCTGGCTGCCCAAGAAGCGCTGCAAGATGACGGGG CCGTATATCTGGTCACATCTTACTGCGGCGGCGGCGAGCTCCACGACTTC ATCCTTGGGCGGACGCTGGCCGAGAACGAGGCGCGGCCGCTGTTTCGGCA GTTGGCGGAGGGCGTAGCGTTTTTGCAGAGCGAGGACGTCCGCATCTGCC ATAGGTGAGGAGGTGGCCCCTTTGCTATTTTTGCTTTGGTTAGTGCTCCT TTGGCTGAGCGTTTTACGCAGGGAAGGTTGAGATCAGGAAGTGCATCGTT TGTTTTGTGTTTTGGGGCATTTTTGTGTGCTTTTCTGGTATTTTTCAGTG GGTGATGAAACGGTCGGTTGTGCCAAGAAGGAACGCGCGGGGCTGAGCAT ATCGTTTCTATGAGTTGTGCTACTTTCTGCTTTTCAGCGCGATCCTGATT CGTCGAAAACGGAACCGCAATCCCGTCCGGAAACGCACAGAGACCTGTCG CCGGAGAACGTGTTGCTCCGCGACGACGGGGCCGGGGACAGCGAAGACTT GGTGATAATGGACTTCGGGCTGGCGCTGCGGGTGCCAGTCGACCGAGAGG GGCGGCCGGCCGTCGTGGCGTCGGGCGGCGCCGTTGGGAAGCTGCACTAC ATGAGCCCGGAGGTTTTGACAAACCAGCCGTTCAACGGTTTCTCGGTGGA CGTCTGGGCTTGCGGCGTCATTCTCTTCATGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1930:5437..6220+

>mRNA_P-wetherbeei_contig1930.2.1 ID=mRNA_P-wetherbeei_contig1930.2.1|Name=mRNA_P-wetherbeei_contig1930.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig1930:5437..6220+ (Phaeothamnion wetherbeei SAG_119_79)
GAAGACCCCATCAAGGAAATTTCTGCCCTCCAACTCCTTGGCGCCGCCGG
CAGCCACCCCAACGTGCTGGCTGCCCAAGAAGCGCTGCAAGATGACGGGG
CCGTATATCTGGTCACATCTTACTGCGGCGGCGGCGAGCTCCACGACTTC
ATCCTTGGGCGGACGCTGGCCGAGAACGAGGCGCGGCCGCTGTTTCGGCA
GTTGGCGGAGGGCGTAGCGTTTTTGCAGAGCGAGGACGTCCGCATCTGCC
ATAGAGACCTGTCGCCGGAGAACGTGTTGCTCCGCGACGACGGGGCCGGG
GACAGCGAAGACTTGGTGATAATGGACTTCGGGCTGGCGCTGCGGGTGCC
AGTCGACCGAGAGGGGCGGCCGGCCGTCGTGGCGTCGGGCGGCGCCGTTG
GGAAGCTGCACTACATGAGCCCGGAGGTTTTGACAAACCAGCCGTTCAAC
GGTTTCTCGGTGGACGTCTGGGCTTGCGGCGTCATTCTCTTCATGTGA
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