mRNA_P-wetherbeei_contig1926.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1926.1.2 vs. uniprot
Match: A0A836C6X8_9STRA (PsbP-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X8_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.820e-57 Identity = 98/192 (51.04%), Postives = 130/192 (67.71%), Query Frame = 1
Query: 1 AEACHTRQELLLAGASALASGLALTTFPLGARAAEEVALSRT--KLGGLLEPFSDISKGFKMFKPSGWNQFDGIPGEYDVKFVDIVNPSEVVIISTTPVKSDTELSALGGAQAVGEKISKSRGVELLSARERVTDQISFYDFEFKGERMHELRSLCINKGKLWSLTEVAPERQWTKREQMMRTLQTSFLPKL 570
A++ TR+ + SA AS +A+ +AE V + RT +LGGLLEP+SD + FKMFKP GWN+FD IPGEYDVKF DI+NP+E++ +STT VKS+T L ALG A+GEK++K RG +L+ AR+R TD I FYD EF ER+H LR+LC+ +G+LWSL R W KRE R + F+P+L
Sbjct: 7 AQSAATRRTFVTDAVSA-ASAIAIAAAVPAVASAETVEVPRTTSRLGGLLEPYSDTGRAFKMFKPLGWNKFDAIPGEYDVKFTDIINPAEILTLSTTAVKSETTLEALGDVTALGEKLAKGRGAQLVGARDRRTDGIRFYDLEFVTERLHVLRTLCVYRGRLWSLEATTTARAWPKREATYRAVVDGFVPRL 197
BLAST of mRNA_P-wetherbeei_contig1926.1.2 vs. uniprot
Match: D8LJF7_ECTSI (Photosystem II oxygen evolution complex protein PsbP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF7_ECTSI) HSP 1 Score: 190 bits (483), Expect = 1.090e-56 Identity = 96/193 (49.74%), Postives = 134/193 (69.43%), Query Frame = 1
Query: 1 AEACHTRQELLLAGASALASGLALTTFPL---GARAAEEVALSRTKLGGLLEPFSDISKGFKMFKPSGWNQFDGIPGEYDVKFVDIVNPSEVVIISTTPVKSDTELSALGGAQAVGEKISKSRGVELLSARERVTDQISFYDFEFKGERMHELRSLCINKGKLWSLTEVAPERQWTKREQMMRTLQTSFLPKL 570
AE R + L A+ AS + L + G +++V L TKLGG LEPF+D+SKG+++ KP GWN++DG GEY VK VD+V+P+ +++++ +PVKSDTELS LG A VGEK+SK R +EL+SAR+RVT+ I YDFEFKG EL++L +NK KLW+LT PE+ W K+E+ +T+ SFLP+L
Sbjct: 40 AEGPSDRAQFLTTSAAVAASAVMLPLVAVADEGETGSKQVKLVTTKLGGKLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGSATQVGEKLSKGRDMELVSARDRVTEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWEKQEEPFKTIVDSFLPRL 232
BLAST of mRNA_P-wetherbeei_contig1926.1.2 vs. uniprot
Match: A0A6V2XVF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XVF7_HETAK) HSP 1 Score: 177 bits (450), Expect = 8.690e-52 Identity = 92/192 (47.92%), Postives = 132/192 (68.75%), Query Frame = 1
Query: 1 AEACHTRQELLLAGASALASGLALTTFPLGARAA-EEVALSRTKLGGLLEPFSDISKGFKMFKPSGWNQFDGIPGEYDVKFVDIVNPSEVVIISTTPVKSDTELSALGGAQAVGEKISKSRGVELLSARERVTDQISFYDFEFKGERMHELRSLCINKGKLWSLTEVAP-ERQWTKREQMMRTLQTSFLPKL 570
AE R+E+L A +A+A+ T P+ A A E+V + +++GG ++P++D++KGFK+ +P GW+ F PGEYDVKFVD+VN +E + +STTPVKS T + ALG AVG K++ SRG ELLSA +++T+ I Y FEFK +E+ L INKG+LWSL+ VAP E+ W KR++ R + SFLP+L
Sbjct: 40 AEGAMGRREVLAAATAAVATA----TVPIVAFAEPEQVERATSRMGGTMDPYNDVNKGFKLMRPGGWDAFSNAPGEYDVKFVDLVNKAETITVSTTPVKSSTSIDALGEVGAVGAKLAASRGAELLSANDKITENIRAYTFEFKKGSSYEIYQLSINKGRLWSLSCVAPSEKSWAKRKEAYRVVAGSFLPRL 227
BLAST of mRNA_P-wetherbeei_contig1926.1.2 vs. uniprot
Match: A0A4D9DH77_9STRA (PsbP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DH77_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.830e-49 Identity = 90/185 (48.65%), Postives = 127/185 (68.65%), Query Frame = 1
Query: 19 RQELLLAGASALASGLALTTFPLGARAAEEVALSRTKLGGLLEPFSDISKGFKMFKPSGWNQFDGIPGEYDVKFVDIVNPSEVVIISTTPVK-SDTELSALGGAQAVGEKISKSRGVELLSARERVTDQISFYDFEFKGERMHELRSLCINKGKLWSLTEVAPERQWTKREQMMRTLQTSFLPKL 570
R+ LL A +L GL + A A EEV L R K GGLLEP++DI+KG K+ +PSGWNQF+G P Y VK+ DI+N EVVI+++TPVK S T + ALG Q VG+K++ RG EL+ A+ R+T+ + FY+FEFKGE + E+ LC+ KG+LW+L+ + ++W KR +++ + SFLPKL
Sbjct: 61 RRALLFKSAGSLL-GLVGLSLARPAEAVEEVPLVRDKQGGLLEPYTDIAKGLKLSRPSGWNQFEGTPETYVVKWSDIINRDEVVILNSTPVKASTTAVDALGDVQDVGKKLAAGRGAELVEAKARLTEGVLFYEFEFKGEAVSEVACLCVAKGRLWNLSATSATKRWPKRRDLLKGVIGSFLPKL 244
BLAST of mRNA_P-wetherbeei_contig1926.1.2 vs. uniprot
Match: A0A7S4JXM0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JXM0_9EUKA) HSP 1 Score: 162 bits (409), Expect = 9.600e-46 Identity = 90/189 (47.62%), Postives = 121/189 (64.02%), Query Frame = 1
Query: 1 AEACHTRQELLLAGASALAS-GLALTTFPLGARAAEEVALSRTKLGGLLEPFSDISKGFKMFKPSGWNQFDGIPGEYDVKFVDIVNPSEVVIISTTPVKSDTELSALGGAQAVGEKISKSRGVELLSARERVTDQISFYDFEFKGERMHELRSLCINKGKLWSLTEVAPERQWTKREQMMRTLQTSFLP 564
A A TR+ L+ AG +A+A+ GLA + +AEE SR LGGLLEPF DI KG+K++KPSGW Q+ PG YDVKF DI+ P E VI+S++PV + T +SALG VG K +KSR EL+ A ER D Y E KG+ HEL +L IN+GKL+ +T A ++W+KR ++ + SF+P
Sbjct: 35 ASAAMTRRHLVQAGGAAVAALGLASSA------SAEEETFSR--LGGLLEPFVDIQKGYKLYKPSGWTQYSIDPGVYDVKFADIIEPFESVIVSSSPVATATSISALGDLPTVGAKFAKSRNAELVKATERTADGNLVYTLELKGDVYHELLTLSINRGKLFRVTATATNKRWSKRSELYSNIMLSFVP 215
BLAST of mRNA_P-wetherbeei_contig1926.1.2 vs. uniprot
Match: A0A7S4BPW2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BPW2_CHRCT) HSP 1 Score: 158 bits (400), Expect = 2.490e-44 Identity = 72/148 (48.65%), Postives = 103/148 (69.59%), Query Frame = 1
Query: 124 TKLGGLLEPFSDISKGFKMFKPSGWNQFDGIPGEYDVKFVDIVNPSEVVIISTTPVKSDTELSALGGAQAVGEKISKSRGVELLSARERVTDQISFYDFEFKGERMHELRSLCINKGKLWSLTEVAPERQWTKREQMMRTLQTSFLPK 567
+++GG LEPF D+ KG+K++KP WNQFD PG YDVKF D++ P E+V +S++PV + T +SALG AVG K +KSR EL+SA+ER D Y FE KGE HE +L +N+GKL+ ++ V ++W KRE++ + + SF+PK
Sbjct: 74 SRMGGALEPFIDVQKGYKLYKPVAWNQFDADPGVYDVKFQDVIEPFEIVQVSSSPVTTATSVSALGDVSAVGVKFAKSRNAELISAKERDADGSLVYTFELKGEMYHEYLALAVNRGKLFRVSTVTSNKRWPKREELFKNIILSFVPK 221
BLAST of mRNA_P-wetherbeei_contig1926.1.2 vs. uniprot
Match: L1IBP9_GUITC (WW domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IBP9_GUITC) HSP 1 Score: 157 bits (397), Expect = 5.550e-44 Identity = 73/153 (47.71%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 124 TKLGGLLEPFSDISKGFKMFKPSGWNQFDGIPGEYDVKFVDIVNPSEVVIISTTPVKSDTELSALGGAQAVGEKISKSRGVELLSARERVTDQISFYDFEFKG----ERMHELRSLCINKGKLWSLTEVAPERQWTKREQMMRTLQTSFLPKL 570
TK+GGLL PF D++KGF++F+PSGWNQFD PGEYDVK+ D+V SE+V++ ++PVKS T+++ LG VG ++ + EL+ A+E I FY F FK E+ LC+NKGKLWS+T E++W KR+ + T+ +SF+PKL
Sbjct: 63 TKMGGLLSPFKDVNKGFQIFRPSGWNQFDSAPGEYDVKWEDLVEKSELVMVGSSPVKSATDVNVLGPVDKVGASLASKKKAELVEAKETERSGIRFYTFVFKAGDDKTGAREVYQLCVNKGKLWSVTATTAEKRWNKRKDLYSTIFSSFVPKL 215
BLAST of mRNA_P-wetherbeei_contig1926.1.2 vs. uniprot
Match: A0A0M0JUJ4_9EUKA (Photosystem ii oxygen evolving complex protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JUJ4_9EUKA) HSP 1 Score: 155 bits (391), Expect = 3.280e-43 Identity = 73/160 (45.62%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 88 GARAAEEVALSRTKLGGLLEPFSDISKGFKMFKPSGWNQFDGIPGEYDVKFVDIVNPSEVVIISTTPVKSDTELSALGGAQAVGEKISKSRGVELLSARERVTDQISFYDFEFKGERMHELRSLCINKGKLWSLTEVAPERQWTKREQMMRTLQTSFLPK 567
G AA + +K+GGLLEP+ D KG+K++ P GWN+F+ PG YDVKF D++ P V +ST+PV + T +SALG VG K +KSR EL+ A E + Y FE KGE HEL +LCIN+GKL+ +T V ++W KR+++ + + SF+PK
Sbjct: 44 GLHAASAAEPTFSKMGGLLEPYIDTQKGYKLYSPKGWNKFESDPGVYDVKFQDVIEPETTVQVSTSPVATATSVSALGDLPTVGAKFAKSRNAELVKAEESDVEGSLVYTFELKGELYHELLALCINRGKLYRVTTVTSNKKWPKRQELYKNIVASFVPK 203
BLAST of mRNA_P-wetherbeei_contig1926.1.2 vs. uniprot
Match: A0A7S3LCU1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCU1_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.330e-42 Identity = 77/178 (43.26%), Postives = 118/178 (66.29%), Query Frame = 1
Query: 43 ASALASGLALTTFPLGARAAEEVALSRTKLGGLLEPFSDISKGFKMFKPSGWNQFDGIPGEYDVKFVDIVNPSEVVIISTTPVKSDTE-LSALGGAQAVGEKISKSRGVELLSARERVTDQISFYDFEFK-GERMHELRSLCINKGKLWSLTEVAPERQWTKREQMMRTLQTSFLPKL 570
A+ ++ + L P A E+ T++GGLLEPF D ++G ++ PSGWN+FDG G YD+K+ D+V+P+E + +S++PVKS TE ++ LG + VG+ ++ R +LL+A ERVTD I FY FEF + H+L LC+ KGKLWSL + E++W+KR ++ + + SF+PKL
Sbjct: 35 AALTSAAVLLPNLPAQAEVTEDTPRVVTRMGGLLEPFQDGTRGIRLMAPSGWNKFDGEVGAYDIKWQDLVDPTENIKLSSSPVKSTTESVAPLGPVEEVGKSLAAKRNAKLLAAEERVTDGILFYKFEFAIADGTHQLLQLCVAKGKLWSLDASSKEKRWSKRGELYQNILGSFIPKL 212
BLAST of mRNA_P-wetherbeei_contig1926.1.2 vs. uniprot
Match: A0A7S2A319_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A319_TRICV) HSP 1 Score: 153 bits (386), Expect = 3.100e-42 Identity = 82/178 (46.07%), Postives = 118/178 (66.29%), Query Frame = 1
Query: 49 ALASGLAL-TTFPLGARAAEEVALSRTKLGGLLEPFSDISKGFKMFKPSGWNQFDGIPGEYDVKFVDIVNPSEVVIISTTPVKSDT-ELSALG-GAQAVGEKISKSRGVELLSARERVTDQISFYDFEFK-GERMHELRSLCINKGKLWSLTEVAPERQWTKREQMMRTLQTSFLPKL 570
A+A+G+A P A EE T++GGLLEP+ D ++G++ PSGWN+FDG G YD K+ D+V+ +E + +S+TPVKS T +SA+G Q VGEK++ R +L+SA ER TD I FY F+F + H+L LC+NKG++WSL A E++W+KRE+M + SF+PKL
Sbjct: 45 AVAAGIAAGAPLPAIAAVTEETPRITTRMGGLLEPYQDSTRGWRTLVPSGWNKFDGEVGAYDTKWQDLVDNTENIKLSSTPVKSTTTSISAIGEDVQEVGEKLASKRSAKLISASERQTDGILFYKFDFALDDGTHQLLQLCVNKGRIWSLDANAKEKRWSKREEMYNNVMGSFMPKL 222 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1926.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1926.1.2 >prot_P-wetherbeei_contig1926.1.2 ID=prot_P-wetherbeei_contig1926.1.2|Name=mRNA_P-wetherbeei_contig1926.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp MFKPSGWNQFDGIPGEYDVKFVDIVNPSEVVIISTTPVKSDTELSALGGAback to top mRNA from alignment at P-wetherbeei_contig1926:38..1834- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1926.1.2 ID=mRNA_P-wetherbeei_contig1926.1.2|Name=mRNA_P-wetherbeei_contig1926.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1797bp|location=Sequence derived from alignment at P-wetherbeei_contig1926:38..1834- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1926:38..1834- >mRNA_P-wetherbeei_contig1926.1.2 ID=mRNA_P-wetherbeei_contig1926.1.2|Name=mRNA_P-wetherbeei_contig1926.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig1926:38..1834- (Phaeothamnion wetherbeei SAG_119_79)back to top |