mRNA_P-wetherbeei_contig1925.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1925.1.1
Unique NamemRNA_P-wetherbeei_contig1925.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1925.1.1 vs. uniprot
Match: D7G0Q5_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q5_ECTSI)

HSP 1 Score: 331 bits (848), Expect = 4.870e-94
Identity = 303/753 (40.24%), Postives = 394/753 (52.32%), Query Frame = 1 
Query:    1 ILNKANVSRIHKFLEEPSTRSGESIREVRAAAXXXXXXXXXXXXXXXXXXXXEDDPAESSFGG-------IEMAPELGKALGSCSRFGDGDGSYWDRWLTTASYGVQGGRQRPTQMPTKSSYSTGTVFPRSGFKRYRLDKLEVPELPANRIPTYKDFCAGRAEKPETLSSSDSDER------NXXXXXXXXXXXXXXXXXXXXEMLADMRPPKVSPLRSSRSGASGARTPTDGSHLGSTHSAEQQNAGNAAAATMTEGRKRRGNGGVGSGSLPESPNGGSGSRADGGSXXXXXRG--------AKEQLAEKAQLEALRISHNYFGQPGRESFYASYREVSQGWNLHGSTVAG--------DAVGAAAASQTTPPTARLSRTDAVQPRKLSSTAADKAAVDAVVVTARKRLTSGQSAPMLALRAGSAXXXXXXXXXXXAS--DEKEATDADCDELRDWQNSSRTRFLMGCVEAVLAPRASMMVRRLETTAVRLGHLGMGDRLGVVLARCLEDMPRMRELDLCDNRLTDRSLLPIVRGLSQRSDLTALDLSQNKLDGATSGELAEYFSGPGALLTTLVLSRADIDDVEAAMFVRALWPSNTLTSLDLSRNLIGAQESLNYVRPSFYTGAEAIADWLQSPGCRLTNLDLSWNTIRLDSAVTLGVALGKCSTLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSISMGGNLLGRVGARGVMQLPAELGDK 2166
            +L  AN+ RI  FL+EP    G+ I ++   A                        A  S G        +E  PE+ K LG  SRFGDGDGS+WDRWLTT  +  + G      MPT+S YSTG V P SGFKRY+LDKL   + P  R+ TY    A R E  +++ S ++ +R                           E        K++  +S+   +     PT G    ST S  Q            EG KR   G    G+  +  + G  S ADG +      G         ++   E A  +   +  NYFG+  R   Y  Y++VS+  + +G   A         D +GA  A Q       +  T+     K + T  D       + +A+   T+    P LA  A +                DE E   +   E  D Q +SRT++L+ C+E  +APRA +++R+  TT V L H GMGD +G +LA CL ++P  REL+L DNRLTD+ L P+V+ + QR DL ALDLS+NKLD   + ELA YFS     L   +LS+AD+DD EA+ FV+ +  + TLT LDLS NLIG+QES+NYVRP FYTGAEA+ADW+ +  C L  LD+SWNTIRLDSAV  G A+   + L  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     R I +  N LG+VG   VM+LPAE+GD+
Sbjct:   52 VLGMANLKRIQNFLDEPQKHLGQVIADIEKEAGSFYDQVSSRQQGSGAGKQRMQRGAPQSPGATPAQAISLEDVPEMNKYLGPSSRFGDGDGSFWDRWLTTTGHFTEQGSYATADMPTRSMYSTGVVPPHSGFKRYQLDKLAFTKHPEPRVLTY----AARWELGDSIKSDEAPKRLRGGYSESTLGPDRRNWLDEVVLAKAAEEFKSQTNNKLARQQSAHRSSDEHEIPTPGDEYSSTTSRSQD------VGIRLEGTKRPVVGLTSIGAAGKDEDQGDRS-ADGDTDNEKRSGPGDESRLITRDTCLEDAVAKFGLVHPNYFGRRARTHVYNYYKQVSRRRHQYGDLQAMSMIPLTPLDHMGALPAYQAGLDAINIEDTEQALHEKAARTNID-------IDSAKPETTTPHKLPPLATTAAAGWQSESGDKGSGVDEGDEHERKMSKALENNDRQITSRTKYLVRCMERNVAPRAHVIIRKTHTTKVNLAHQGMGDVMGGILADCLVELPLTRELNLRDNRLTDKGLRPLVKAIKQRHDLYALDLSENKLDRWAARELAFYFSDSRCTLAKFILSKADVDDFEASNFVKHMKANKTLTYLDLSHNLIGSQESINYVRPEFYTGAEALADWVSTGSCPLKYLDVSWNTIRLDSAVYFGNAVAYATDLETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNSVTRDIDLSNNPLGKVGVGCVMELPAEVGDR 786
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BLAST of mRNA_P-wetherbeei_contig1925.1.1 vs. uniprot
Match: A0A835Z3V7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V7_9STRA)

HSP 1 Score: 227 bits (579), Expect = 7.910e-65
Identity = 115/190 (60.53%), Postives = 142/190 (74.74%), Query Frame = 1 
Query: 1345 MMVRRLETTAVRLGHLGMGDRLGVVLARCLEDMPRMRELDLCDNRLTDRSLLPIVRGLSQRSDLTALDLSQNKLDGATSGELAEYFSGPGALLTTLVLSRADIDDVEAAMFVRALWPSNTLTSLDLSRNLIGAQESLNYVRPSFYTGAEAIADWLQSPGCRLTNLDLSWNTIRLDSAVTLGVALGKCSTL 1914
            M+VRRL+TT V L H GMGD+LG +LA CL D+P MR L L DNRLTD +LLP+VR + +R+DL  LDLS+N   G  + ELA YFS  G  L TL+LS AD+DD EA+ FV  L  + +LT LDLSRNLIG QES+NYV P+FYTGAEA+ADWL  P CRL +LD+SWNTIRL SA++ G AL + ++L
Sbjct:    1 MLVRRLQTTRVDLSHAGMGDQLGALLAACLADLPCMRALSLRDNRLTDAALLPVVRAIRRRNDLQELDLSENVCGGGAAAELAAYFSDRGVCLRTLMLSAADLDDGEASKFVEQLRHNTSLTHLDLSRNLIGKQESVNYVNPAFYTGAEALADWLAMPQCRLRHLDVSWNTIRLGSAISFGEALARNASL 190
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BLAST of mRNA_P-wetherbeei_contig1925.1.1 vs. uniprot
Match: A0A7S3H921_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H921_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.080e-40
Identity = 90/210 (42.86%), Postives = 131/210 (62.38%), Query Frame = 1 
Query: 1285 SSRTRFLMGCVEAVLAPRASMMVRRLETTAVRLGHLGMGDRLGVVLARCLEDMPRMRELDLCDNRLTDRSLLPIVRGLSQRSDLTALDLSQNKLDGATSGELAEYFSGPGALLTTLVLSRADIDDVEAAMFVRALWPSNTLTSLDLSRNLIGAQESLNYVRPSFYTGAEAIADWLQSPGCRLTNLDLSWNTIRLDSAVTLGVALGKCSTL 1914
            S RT+++ GC+   L P  ++++R+  +TA  L H G+GD++G VLA CL D+P +  ++L DN LTD SL  +++ +     L  LDLS+NK+DG +S  LAEY S P   LT L +  AD+DD EA  FV+ L  +  L  LDLS NL+G  ES +    S  TG  ++A+++ S  C+L  L +SWN+IRL+SAV L  A+   +TL
Sbjct:  561 SPRTKYISGCIRDSLQPMPNLILRKNFSTAHNLAHYGIGDKMGCVLAECLADLPHLEAINLADNNLTDVSLKHLIQAIINIKSLQDLDLSRNKIDGDSSDALAEYLSDPKCPLTKLTMQSADVDDGEADRFVQCLCSNEKLLELDLSSNLLGTAESASMGDASIKTGGASLAEFISSASCKLEVLKVSWNSIRLNSAVKLTKAVAFNNTL 770
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BLAST of mRNA_P-wetherbeei_contig1925.1.1 vs. uniprot
Match: A0A6G0WGZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGZ0_9STRA)

HSP 1 Score: 170 bits (431), Expect = 3.160e-40
Identity = 91/204 (44.61%), Postives = 134/204 (65.69%), Query Frame = 1 
Query: 1285 SSRTRFLMGCVEAVLAPRASMMVRRLETTAVRLGHLGMGDRLGVVLARCLEDMPRMRELDLCDNRLTDRSLLPIVRGLSQRSDLTALDLSQNKLDGATSGELAEYFSGPGALLTTLVLSRADIDDVEAAMFVRALWPSNTLTSLDLSRNLIGAQESLNYVRPSFYTGAEAIADWLQSPGCRLTNLDLSWNTIRLDSAVTLGVAL 1896
            ++R +FL  C++  L P   +++R   +  + + H+ MGD L  V  +CL D+P +  L++ +NRLTD  +  +V  + +++DL +LD+S+NK+DGA S  LA + S P   LTTL LS+ DIDD E   F +AL  + TL +LDLSRNLIG+ E+LN V+P   TG EA+A+ L +    LT+L+LSWN +RL+SAV LG AL
Sbjct:  220 TARHKFLSLCLDHELPPCLRLIIRHKVSAEINVSHMSMGDALAQVFCQCLVDLPMVLALNMRNNRLTDAGIQAVVDVVVRKADLCSLDISENKVDGAASVALAAFLSTPSCGLTTLALSQCDIDDNEVLGFAKALCANKTLHNLDLSRNLIGSNEALNVVQPDLTTGGEALAEMLTANN-HLTSLNLSWNFLRLNSAVELGRAL 422
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BLAST of mRNA_P-wetherbeei_contig1925.1.1 vs. uniprot
Match: T0Q8G5_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q8G5_SAPDV)

HSP 1 Score: 167 bits (422), Expect = 4.200e-39
Identity = 89/205 (43.41%), Postives = 127/205 (61.95%), Query Frame = 1 
Query: 1285 SSRTRFLMGCVEAVLAPRASMMVRRLETTAVRLGHLGMGDRLGVVLARCLEDMPRMRELDLCDNRLTDRSLLPIVRGLSQRSDLTALDLSQNKLDGATSGELAEYFSGPGALLTTLVLSRADIDDVEAAMFVRALWPSNTLTSLDLSRNLIGAQESLNYVRPSFYTGAEAIADWLQSPGCRLTNLDLSWNTIRLDSAVTLGVALG 1899
            ++R +F+  C+E  L P   +++R   +  + + H+ MGD L  + + CL ++P +  L+  +NRLTD  L  +V  +  + DL ALDLS+NK+DG  +  LAEY   P   LTTL+LS  DIDD E   F  A+  +   T+L+LSRNLIG  E+LN V+P   TG EA+AD L +    LT LDLSWN +RL+SA+ LG A+G
Sbjct:  206 TARHKFVSMCLEHELPPCLRLIIRNKISPEINVSHMSMGDELAKIFSACLVELPMVLSLNARNNRLTDPGLQALVNVVRSKPDLVALDLSENKVDGDAAEALAEYLGNPLCGLTTLILSTCDIDDGELIPFADAMKTNRICTTLNLSRNLIGTSEALNAVQPDLVTGGEALADMLAANN-HLTKLDLSWNVLRLNSAIQLGRAIG 409
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BLAST of mRNA_P-wetherbeei_contig1925.1.1 vs. uniprot
Match: A0A1V9YFY2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YFY2_9STRA)

HSP 1 Score: 165 bits (418), Expect = 5.750e-39
Identity = 89/206 (43.20%), Postives = 126/206 (61.17%), Query Frame = 1 
Query: 1285 SSRTRFLMGCVEAVLAPRASMMVRRLETTAVRLGHLGMGDRLGVVLARCLEDMPRMRELDLCDNRLTDRSLLPIVRGLSQRSDLTALDLSQNKLDGATSGELAEYFSGPGALLTTLVLSRADIDDVEAAMFVRALWPSNTLTSLDLSRNLIGAQESLNYVRPSFYTGAEAIADWLQSPGCRLTNLDLSWNTIRLDSAVTLGVALGK 1902
            ++R +F+  C+E  L P   +++R   +  + + H+ MGD L  V + CL ++P +  L+  +NRLTD  L  +V  +S + DL  LDLS+NK+DG  +  LAEY       L TL+LS  DIDD E   F  AL  +   T+L+LSRNLIG  E+LN V+P   TG EA+AD L +    LT+LDLSWN +RL SA+ LG A+G+
Sbjct:  269 TARHKFVSMCLENELPPCLRLIIRNKVSPEINISHMSMGDELAKVFSACLLELPMVFSLNARNNRLTDPGLQALVHVISSKPDLFCLDLSENKVDGDAAKALAEYLGSNNCGLKTLILSSCDIDDGELVPFAEALHNNRVCTTLNLSRNLIGTSEALNVVQPDLTTGGEALADMLAA-NSHLTHLDLSWNLLRLGSAIELGRAIGQ 473
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BLAST of mRNA_P-wetherbeei_contig1925.1.1 vs. uniprot
Match: W4FHH0_9STRA (Hydroxymethylglutaryl-CoA reductase (NADPH) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FHH0_9STRA)

HSP 1 Score: 166 bits (420), Expect = 7.450e-39
Identity = 89/203 (43.84%), Postives = 131/203 (64.53%), Query Frame = 1 
Query: 1285 SSRTRFLMGCVEAVLAPRASMMVRRLETTAVRLGHLGMGDRLGVVLARCLEDMPRMRELDLCDNRLTDRSLLPIVRGLSQRSDLTALDLSQNKLDGATSGELAEYFSGPGALLTTLVLSRADIDDVEAAMFVRALWPSNTLTSLDLSRNLIGAQESLNYVRPSFYTGAEAIADWLQSPGCRLTNLDLSWNTIRLDSAVTLGVA 1893
            ++R +FL  C++  L P   +++R   +  + + H+ MGD+L  V   CL ++P +  L+L +NRLTD  +  +VR ++++ DL  LDLS+NK+DG  S  LA Y + P   L+TL+LS  DIDD E   F +AL  + T  +LDLSRN+IG+ E+LN V+P   TG EA+A+ L + G  LT L+LSWN +RL+SAV LG A
Sbjct:  207 TARHKFLSLCLDHELPPCLRLIIRSKVSPEINVSHMSMGDQLVQVFCECLLELPMVLSLNLRNNRLTDVGIPAVVRVVAKKHDLCYLDLSENKVDGEGSSALASYMATPSCGLSTLILSHCDIDDGEVVAFAKALCTNRTCHTLDLSRNIIGSNEALNVVQPDLVTGGEALAEMLATNG-HLTVLNLSWNFLRLNSAVELGRA 408
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BLAST of mRNA_P-wetherbeei_contig1925.1.1 vs. uniprot
Match: A0A1V9YK53_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YK53_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.020e-38
Identity = 88/206 (42.72%), Postives = 126/206 (61.17%), Query Frame = 1 
Query: 1285 SSRTRFLMGCVEAVLAPRASMMVRRLETTAVRLGHLGMGDRLGVVLARCLEDMPRMRELDLCDNRLTDRSLLPIVRGLSQRSDLTALDLSQNKLDGATSGELAEYFSGPGALLTTLVLSRADIDDVEAAMFVRALWPSNTLTSLDLSRNLIGAQESLNYVRPSFYTGAEAIADWLQSPGCRLTNLDLSWNTIRLDSAVTLGVALGK 1902
            ++R +F+  C+E  L P   +++R   +  + + H+ MGD L  V + CL ++P +  L+  +NRLTD  L  +V  +  + DL +LDLS+NK+DG  +  LA Y   P   LT L+LS  DIDD E   F  AL  +   T+L+LSRNLIG  E+LN V+P   TG EA+AD L +    LT LDLSWN +RL+SA+ LG A+G+
Sbjct:  114 TARHKFVSMCLENELPPCLRLIIRNKISPEINVSHMSMGDALAKVFSACLLELPMVLSLNARNNRLTDPGLQALVEVVRMKPDLVSLDLSENKVDGDAARALATYLGSPQCGLTALILSTCDIDDGELVPFAEALHNNRICTTLNLSRNLIGTSEALNVVKPDLTTGGEALADMLAA-NSHLTKLDLSWNLLRLNSAIQLGRAIGQ 318
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BLAST of mRNA_P-wetherbeei_contig1925.1.1 vs. uniprot
Match: A0A024UEE2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UEE2_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.740e-37
Identity = 87/204 (42.65%), Postives = 126/204 (61.76%), Query Frame = 1 
Query: 1285 SSRTRFLMGCVEAVLAPRASMMVRRLETTAVRLGHLGMGDRLGVVLARCLEDMPRMRELDLCDNRLTDRSLLPIVRGLSQRSDLTALDLSQNKLDGATSGELAEYFSGPGALLTTLVLSRADIDDVEAAMFVRALWPSNTLTSLDLSRNLIGAQESLNYVRPSFYTGAEAIADWLQSPGCRLTNLDLSWNTIRLDSAVTLGVAL 1896
            ++R ++   C+ A L P   +M+R      + + H+ MGD +  + A+CL D+P +  L++ +NRLTD  +  +V     + DLT LDLS+NK+DG  +  LAEY + P   LT L ++ +D+DD E   F +AL  + +L +L+LSRNLIG  E +N V+P   TG EAIA+ L +    LT LDLSWN IRL+SAV LG AL
Sbjct:  258 TARHKYTAMCLIAKLPPSIRLMIRNHTGPEINVSHMAMGDDMCKIFAQCLSDLPMVTSLNVRNNRLTDSGIGALVHVCLNKDDLTMLDLSENKVDGDAAAALAEYVAAPSCALTELRMNMSDVDDGEVLGFAQALHTNTSLRTLELSRNLIGNAEMMNVVKPDMITGGEAIAEMLCNNSF-LTKLDLSWNMIRLNSAVELGKAL 460
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BLAST of mRNA_P-wetherbeei_contig1925.1.1 vs. uniprot
Match: A0A024TAV6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAV6_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.300e-37
Identity = 87/203 (42.86%), Postives = 127/203 (62.56%), Query Frame = 1 
Query: 1285 SSRTRFLMGCVEAVLAPRASMMVRRLETTAVRLGHLGMGDRLGVVLARCLEDMPRMRELDLCDNRLTDRSLLPIVRGLSQRSDLTALDLSQNKLDGATSGELAEYFSGPGALLTTLVLSRADIDDVEAAMFVRALWPSNTLTSLDLSRNLIGAQESLNYVRPSFYTGAEAIADWLQSPGCRLTNLDLSWNTIRLDSAVTLGVA 1893
            ++R +F+  C++  L P   +++R   +  + + H+ MGD L  V   CL ++P +  L+L +NRLTD  +  +VR +  + DL  LDLS+NK+DG  +  LA Y +     L+TL+LS  D+DD EA  F  A+  + T  +LDLSRNLIGA E+LN V+P   TG EA+A+ L + G  LT L+LSWN +RL+SAV LG A
Sbjct:  202 TARHKFVSLCLDHELPPCLRLIIRSKVSPDINVSHMSMGDELVQVFCECLVELPMVHSLNLRNNRLTDAGIAAVVRAVMNKPDLCTLDLSENKVDGDGAAALAAYMATATCGLSTLLLSHCDLDDGEARAFASAMCTNRTCHTLDLSRNLIGANEALNVVQPDLVTGGEALAEMLATNG-HLTVLNLSWNFLRLNSAVELGRA 403
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1925.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Q5_ECTSI4.870e-9440.24Hypothetical leucine rich repeat calcium binding p... [more]
A0A835Z3V7_9STRA7.910e-6560.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3H921_9STRA1.080e-4042.86Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A6G0WGZ0_9STRA3.160e-4044.61Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
T0Q8G5_SAPDV4.200e-3943.41Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YFY2_9STRA5.750e-3943.20Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
W4FHH0_9STRA7.450e-3943.84Hydroxymethylglutaryl-CoA reductase (NADPH) n=3 Ta... [more]
A0A1V9YK53_9STRA2.020e-3842.72Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A024UEE2_9STRA1.740e-3742.65Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]
A0A024TAV6_9STRA2.300e-3742.86Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1925contigP-wetherbeei_contig1925:373..6323 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G0Q5
Model size2190
Max annot lvl2880.D7G0Q5|-
Hectar predicted targeting categoryother localisation
Exons13
Evalue7.99e-95
EggNOG OGsKOG4308@1|root,KOG4308@2759|Eukaryota
Descriptioninterleukin-8 biosynthetic process
Cds size2190
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1925.1.1prot_P-wetherbeei_contig1925.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1925 373..6323 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186167.8558357-CDS-P-wetherbeei_contig1925:372..5041683186167.8558357-CDS-P-wetherbeei_contig1925:372..504Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 373..504 -
1683186167.8660703-CDS-P-wetherbeei_contig1925:740..8831683186167.8660703-CDS-P-wetherbeei_contig1925:740..883Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 741..883 -
1683186167.873996-CDS-P-wetherbeei_contig1925:1203..12561683186167.873996-CDS-P-wetherbeei_contig1925:1203..1256Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 1204..1256 -
1683186167.8821824-CDS-P-wetherbeei_contig1925:2223..23391683186167.8821824-CDS-P-wetherbeei_contig1925:2223..2339Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 2224..2339 -
1683186167.891396-CDS-P-wetherbeei_contig1925:2512..25931683186167.891396-CDS-P-wetherbeei_contig1925:2512..2593Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 2513..2593 -
1683186167.9011042-CDS-P-wetherbeei_contig1925:2904..30911683186167.9011042-CDS-P-wetherbeei_contig1925:2904..3091Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 2905..3091 -
1683186167.9202816-CDS-P-wetherbeei_contig1925:3380..35601683186167.9202816-CDS-P-wetherbeei_contig1925:3380..3560Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 3381..3560 -
1683186167.9313662-CDS-P-wetherbeei_contig1925:3738..40681683186167.9313662-CDS-P-wetherbeei_contig1925:3738..4068Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 3739..4068 -
1683186167.940638-CDS-P-wetherbeei_contig1925:4463..46881683186167.940638-CDS-P-wetherbeei_contig1925:4463..4688Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 4464..4688 -
1683186167.949904-CDS-P-wetherbeei_contig1925:4919..51921683186167.949904-CDS-P-wetherbeei_contig1925:4919..5192Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 4920..5192 -
1683186167.9593139-CDS-P-wetherbeei_contig1925:5409..55221683186167.9593139-CDS-P-wetherbeei_contig1925:5409..5522Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 5410..5522 -
1683186167.9681208-CDS-P-wetherbeei_contig1925:5708..59171683186167.9681208-CDS-P-wetherbeei_contig1925:5708..5917Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 5709..5917 -
1683186167.9769492-CDS-P-wetherbeei_contig1925:6175..63231683186167.9769492-CDS-P-wetherbeei_contig1925:6175..6323Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1925 6176..6323 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1925.1.1

>prot_P-wetherbeei_contig1925.1.1 ID=prot_P-wetherbeei_contig1925.1.1|Name=mRNA_P-wetherbeei_contig1925.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=730bp
ILNKANVSRIHKFLEEPSTRSGESIREVRAAAGGAYAAAAVAAAAASAAR
SNEDDPAESSFGGIEMAPELGKALGSCSRFGDGDGSYWDRWLTTASYGVQ
GGRQRPTQMPTKSSYSTGTVFPRSGFKRYRLDKLEVPELPANRIPTYKDF
CAGRAEKPETLSSSDSDERNDDENGRDGGGGGDAGEDSGAEMLADMRPPK
VSPLRSSRSGASGARTPTDGSHLGSTHSAEQQNAGNAAAATMTEGRKRRG
NGGVGSGSLPESPNGGSGSRADGGSRRRRRRGAKEQLAEKAQLEALRISH
NYFGQPGRESFYASYREVSQGWNLHGSTVAGDAVGAAAASQTTPPTARLS
RTDAVQPRKLSSTAADKAAVDAVVVTARKRLTSGQSAPMLALRAGSAGRS
GGGGGVGGASDEKEATDADCDELRDWQNSSRTRFLMGCVEAVLAPRASMM
VRRLETTAVRLGHLGMGDRLGVVLARCLEDMPRMRELDLCDNRLTDRSLL
PIVRGLSQRSDLTALDLSQNKLDGATSGELAEYFSGPGALLTTLVLSRAD
IDDVEAAMFVRALWPSNTLTSLDLSRNLIGAQESLNYVRPSFYTGAEAIA
DWLQSPGCRLTNLDLSWNTIRLDSAVTLGVALGKCSTLVRLDLGFNGLGC
RGGEALAGALHTNSALTDLNIVSNGITPRAFFVLCQALLVNETLRSISMG
GNLLGRVGARGVMQLPAELGDKKLRVSVN*
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mRNA from alignment at P-wetherbeei_contig1925:373..6323-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1925.1.1 ID=mRNA_P-wetherbeei_contig1925.1.1|Name=mRNA_P-wetherbeei_contig1925.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5951bp|location=Sequence derived from alignment at P-wetherbeei_contig1925:373..6323- (Phaeothamnion wetherbeei SAG_119_79)
ATTCTGAATAAAGCGAACGTGTCGCGAATCCACAAATTTCTTGAAGAACC
TTCCACGAGATCCGGCGAATCCATCAGAGAGGTCCGCGCAGCAGCCGGTG
GCGCCTACGCTGCAGCCGCAGTTGCCGCTGCTGCGGCATCGGCCGCGCGT
GCCAAGGCTGCCGCCGCTACCGTCGCCGCCACCGCCCACCACCGCCTCTC
GGGCAAAAGCGGCGGCGGCCTCTGGGCGGCCGCATACCATCGCTACACTG
TCTCCCCAACGGAGGAAGCTGCCGTCGCCGGCACCGCAGGCGCGGGCGCC
CCCGGACCGCCGCTCTCCGTCTTTGACGGGCGGCGCCTGTACGGCTCGCG
CGCCCACCGCTGCTACAGCAGCGGCATGAACGGCGGAAGCGGCGATGGTG
GCGGAGGCAGTAACGAAGACGACCCGGCGGAGTCGAGCTTCGGCGGGATA
GAGATGGCGCCAGAGCTTGGCAAGGCGCTGGGGTCGTGCTCGCGCTTTGG
CGATGGCGACGGCAGCTACTGGGACCGCTGGCTGACGACGGCGTCGTACG
GCGTGCAGGGTGGGCGGCAGAGGCCGACGCAGATGCCGACGAAGAGCAGC
TACTCCACGGGAACGGTGAGTATGTAAAGTGTTTTCCTCTTTTTGGCGCC
AGGCGGGCAACGTGGTTTCTTAGTCTTCTTATTATGTGGCCAAAGCCAAA
TGCATCATTTCCTGGTGCCCGAGTCGTATGTCCGCCTCCATTGCCGCTGG
CCGAACGAAATGTTTCCGGCGCTGCTTGCTACCGCTTCCTCCCTCCCGCA
GGTCTTTCCCCGGAGCGGTTTCAAGCGTTACCGCCTCGACAAGCTGGAGG
TGCCCGAACTTCCTGCCAACCGCATTCCGACCTACAAAGACTTCTGCGCC
GGCCGCGCCGAAAAGTGGACAGCGGCCACCGTCGCTATCGCTGCTACAGG
GACGAGTAACCGTGGCGCCAATGGAGGAGCTGACAGCGCTCTGTTGAACT
TAGGGAGGTAAGTCCGGGGGACCCAGCCGGAGCTCAGATACTTCTTTCAA
CGGCGACGCTCAGTTCCCTCTCTGACGATGCGCCGTTCTCTCAGTTCCCG
TTTTTGTCGATCCGACGCTGCATGCGCGCAGGCCGGAAACTCTGTCCTCG
TCTGACTCGGACGAGCGTAACGACGACGAGAACGGAAGGGATGGAGGCGG
AGGCGGCGACGCTGGCGAGGACAGCGGCGCTGAAATGCTGGCAGACATGC
GACCGCCGAAAGTCTCGCCGCTGCGATCGTCGCGGTCCGGAGCGTCCGGC
GCAAGGACACCGACCGACGGATCACATCTGGGCTCCACGCACTCCGCAGA
GCAGCAGAATGCGGGCAACGCCGCTGCCGCCACGATGACTGAAGGAAGAA
AGCGGTTACGCCGGTCCCCTACCATCGCCATCGAGGACTTGGCGCCGCCG
GGCTTTCTTGACCAGAAACGCCACGCATGGGGAGGGAAGGAGAAATGCGG
CGTTTGGGGCTTGCCACGGCAGCCCGGCTCGGCTTTGGATATACGGCCTG
GCAGCAACGGCAGTGGCGGCGGCGGCAGCAGCAGGGGCCGCCGAAGAGGT
AGCAGCAGCGGCGGGAGCGACCACTACGGAGGCAGCCGCGGCAACGGCGG
TGTCGGCAGCGGGAGCCTCCCCGAAAGTCCCAATGGCGGTAGCGGCAGCC
GAGCTGATGGCGGGAGCCGGCGCAGGCGGCGGCGGGGGGCGAAGGAACAG
CTGGCGGAGAAGGCGCAGTTGGAGGCTCTGCGAATCTCCCACAATTACTT
CGGACAGCCAGGCCGTGAAAGCTTTTACGCATCGTACAGAGAGGTGAGCC
AAGGATGGAAGTCTCTCCTCGCAGTTCCCTGGAACAGACCAGTTCCCTCA
CCGACCATATTTCACAAGTCCTACTCCTTTCCACCCTGAGCGCTCTGTCT
TCTGTTCCGATTTCGTGCTCACTTTGTTATTGCTTTAGTACCTCTGCCGC
CGCTTACTCCGGTCAATCTCTGGTTGCCTGCCGTTGGCCCCGCTCCCAGC
TTTCCCGGCAACGGGCGCATTATGTCGACGCTAAGGAGATGGGGTTCGGC
AGTTTCGCCTTGCCGCCGCCAGCGGGGCACCCGTGGCCTGCCCACACCGA
CGCCATAAGTGCGGCCACTGGAGATTCGGAAAAAGAGAACCCTATTTCCG
GCAACACAGCAGCGACAGCAGCAGCTTCGGCATCGCCTATACCAGCACGA
CAAAGCCTCCACGGCTCTACCGTAGCAGGAGACGCGGTGGGAGCTGCTGC
GGCGTCGCAAACAACCCCTCCTACGGCACGGCTGAGCCGGACGGACGCGG
TCCAGCCCCGCAAGCTTTCTTCAACAGCCGCCGACAAAGCTGCGGTCGAT
GCGGTGGTGGTGACGGCGCGGAAGCGACTCACGTCAGGCCAGTCTGCGCC
AATGCTGGCGCTGCGCGCCGGCAGCGCCGGTAGAAGCGGCGGCGGCGGCG
GCGTTGGTGGTGCAAGCGACGAAAAGGAAGCGACGGATGCAGACTGCGAT
GAGCTGAGGGACTGGCAGAATTCCAGCCGCACCAGGTGAGTAGGGAAAGG
GCGAGTAAATGTCTTTCCTCGGACGTGCTGTTTTTGGACACAGTCAATTT
CGAGCTCCTCTCCCTGCTCTGGCCTTTCCAGCGTTGTTCCAAGCTCTTCT
CCGAAACGCCATTCGACCCCGACCCTCGCCGCCCCGTCCTGCGCCACGCC
ATCCTTCTCCCAGGTTCCTGATGGGGTGTGTAGAGGCGGTGCTGGCGCCG
CGGGCGTCGATGATGGTACGCCGGCTGGAGACGACGGCAGTGCGGCTGGG
CCATCTCGGCATGGGGGACCGCCTCGGGGTGGTGCTGGCGCGCTGCCTCG
AGGACATGCCCCGCATGCGGGAGCTCGACCTCTGCGACAACAGGTGCGGA
TCGCTTTTTGTTTTCTGTTGATGTTTCCTTCTTTCAGGGTAAATCGATTT
GGGGAGTAGTTGCAGAGGCTTTCCTTGTTATGTCGGCCCCTCTCACATTC
CATCCACGGACGCGTTCGGCATCTTGTGGGTGCTTTCAGCTTCTGCAAAT
GTAACGCAGGTTTTAGACTAAAAACTAAGCGAGCCTTCACCGATTCTTCT
GCTGCCTTCTCGCACTCGCCATGCCGTCAACTCCCTCAAACCTCCTCCTC
CACCATCCTTTCCCACCGACCACCCACGCCAGACTGACGGACCGCAGTCT
ACTGCCCATCGTAAGGGGCTTGAGCCAGCGGAGCGACCTGACGGCCCTAG
ACCTCTCTCAGAACAAGCTCGACGGCGCCACCTCGGGCGAGCTCGCCGAA
TACTTTTCCGGCCCAGGGGCGCTACTGACGACGCTCGTGCTGTCGCGGGC
CGACATCGACGACGTGGAGGTGAGGGATGTGCACGGGTGTCATTTACAGA
GGGAGGGACGATGAGGGAAGAGAGGTGTGGACACGACGAGCTGGCGAGGC
GGTGAGGGGTGCAGCGGGCAGGCATTAGGTTAGGTAGTAGGATTGTTTGC
GGTGGCGGCGGCGCTGCCGGCCATCAGCGAATGTGCGGAGAGGGGCGCCG
CGGCCGCTTCAGAATGACCGGGGGCTTCTACTGTGCATACTGGTCCATTG
TCTGGCTTCCGCATCATGAGTAGTCCCCTTCAAGCCGCTTGTCTAACAAA
CAGCTTCAATCTGGCCAACGTCCGCTGCAGGCGGCGATGTTTGTGCGTGC
GCTGTGGCCGAGCAACACTCTCACCAGTCTGGACCTCTCTCGGAACCTCA
TCGGCGCACAGGTAACGGCCAACATCCGCAGAAGCAGATGCGGCTTCTGT
CTGGCTTCAACCTGGCTTAAAATCAACAGCTTTGTGCGATGAAGCGCCAT
GAATTTTTCCGAGCTTTGTTCCCAAGGTCCATGGCATTTCGATCTCTCTA
ACCGGCAACGGCTATCGCCCCGAACCATCCGCAGGAGAGCCTCAACTACG
TGCGCCCAAGCTTCTACACGGGCGCCGAGGCGATCGCGGACTGGCTGCAG
TCGCCGGGCTGCCGTCTCACCAACCTGGACCTGAGCTGGAACACAATCAG
GTCCGTTGTGGGGCCGGGAGGAAGGTCGTCAGACGTGCTCGGGATCTTAA
AGTTTGCGTTGAGAAGGAACGAGGGGGAGATTGTGTCCAGTATAGTTATT
GCCGTGCAGGAGGGGGGAATCGAGTGCCTGTTGCGGTCAAAGAGGGGCAG
CTTTTAAACAACCCTTTTTGGACTTCACTTTGCCTCTTTCGTCGCCGGGT
CTTCTTGTTTTATCGATGGGAAATAGCGTCTGATGTTCGTCCCTGGGCGT
GTTTGGTCCTTTCTGGCCGGAACGGAGGGCATTGCCAAGCGCTGCACCTG
CGTGCGAGGAGCACAGCCTTCCGGTCAGGGAGGCATCGAGAAGCCCGAAG
GGGCGAACATGAGACGTTTGTACTTTCATTGGCTTCGGACACCACCACAT
CATCATCGGGGACTGCCGCGTTCCCATGAGCCGATACGAGACAACCTTCA
CCGTTGCCTCGCTCTTCGCACACTGACATGTTTACAGCCTTCTTTTGTCG
GAACGAGAGGCAGGCAGAGTTATCCATTTCCCAAATTTTGTCACTGTCGG
CGTGCGAGTGTGGGGAAAATGGACAGCACTTCCTGCCCCACCGGCTCCAA
GGAGGCTGTGACGAATGGATGACTGCTTACAGTCACGATTCCTGGAAAGT
GCGGCACTGGTGATATGGCATGCCTCTGGCCTGCCTATGTGTTTCGGCGC
CCTATCGCAAGAATTCCATGGTTGGTTCTGGACAGTCTCATTTCAATTCA
CGATGATACAGATCGACCCCAGGTGTGACACACACCTCTCTTAGCATCTT
TTGAACAAACGATGTGGGCAGACGTAGGTACAGGTGTCCCGGGGACTAGA
CGTGCCGCTGTCCCACTTCTACTTAGTCTTTGACACCCTTTTCCTGTCTA
CAATTTTCCATCACTCTTGTCTCGCCGGAAAATCCCTCCGCTTTCTGGCC
GTCGGAAAAACTTACAGGCTGGACAGCGCCGTCACGCTGGGTGTGGCGTT
GGGCAAGTGCAGCACGCTTGGTACGTCGGCCGCCGCCACCAGCTCTGTCC
GTTTCCCCATCTTTCGGTTAGAATTGCTGTTATTCGTGGGTTTCTGGGCG
CTGGTGCCGCCGCCGCCACCACCGCCAATGCCGGAATAAAATTCAGCACC
CCCATCGCCGCTATCGCCGCCACCAACACGGCCGCTGTTGCCGCGGCCGC
CACCACCGCCACCACGCCCTGCCGTTCTGCCTCTTACCCATTTCCTTTTC
TCTTGCCCTTTGCCCCACATCCGGATTGTATCGGCGGCGTCCTTCGGGCC
GCCGTCTGGCTCCTGTACGGCTGCTGTCCCGTTTGCGCAGTCCGGCTGGA
CCTGGGGTTCAACGGGCTGGGCTGCCGTGGCGGCGAGGCGCTGGCGGGGG
CGCTGCACACCAACTCGGCGCTGACGGACCTCAACATCGTCAGCAACGGC
ATCACGCCCCGCGCCTTCTTCGTTCTCTGCCAGGTTTGGCGTTTTGGGGA
CGTGTCCTCATTGCTCTGGATTTCGGAGTATTATCTTCCATGCGGAGCCT
TCAGCGAGGTTTCCTCCTCACTTCTCCTCTTCCCTTCTTCCGCCCCTCTC
CCTCCCCTTCCGTCGCGGTACCGAAAAATGATGACCGCGATCATGGCGGC
GATGGCTGTCCCCGGGCGTGTCGGCGGCTGATGGCGGCGGTTCTCTTTTT
CGCGCGATCTGGGTCGCAGGCGCTGCTGGTGAATGAGACGCTGCGGAGCA
TATCGATGGGCGGCAACCTGCTGGGCCGCGTGGGCGCCCGTGGCGTCATG
CAGCTGCCAGCGGAGCTCGGCGACAAGAAGCTGCGGGTGAGCGTGAATTA
G
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1925:373..6323-

>mRNA_P-wetherbeei_contig1925.1.1 ID=mRNA_P-wetherbeei_contig1925.1.1|Name=mRNA_P-wetherbeei_contig1925.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2190bp|location=Sequence derived from alignment at P-wetherbeei_contig1925:373..6323- (Phaeothamnion wetherbeei SAG_119_79)
ATTCTGAATAAAGCGAACGTGTCGCGAATCCACAAATTTCTTGAAGAACC
TTCCACGAGATCCGGCGAATCCATCAGAGAGGTCCGCGCAGCAGCCGGTG
GCGCCTACGCTGCAGCCGCAGTTGCCGCTGCTGCGGCATCGGCCGCGCGC
AGTAACGAAGACGACCCGGCGGAGTCGAGCTTCGGCGGGATAGAGATGGC
GCCAGAGCTTGGCAAGGCGCTGGGGTCGTGCTCGCGCTTTGGCGATGGCG
ACGGCAGCTACTGGGACCGCTGGCTGACGACGGCGTCGTACGGCGTGCAG
GGTGGGCGGCAGAGGCCGACGCAGATGCCGACGAAGAGCAGCTACTCCAC
GGGAACGGTCTTTCCCCGGAGCGGTTTCAAGCGTTACCGCCTCGACAAGC
TGGAGGTGCCCGAACTTCCTGCCAACCGCATTCCGACCTACAAAGACTTC
TGCGCCGGCCGCGCCGAAAAGCCGGAAACTCTGTCCTCGTCTGACTCGGA
CGAGCGTAACGACGACGAGAACGGAAGGGATGGAGGCGGAGGCGGCGACG
CTGGCGAGGACAGCGGCGCTGAAATGCTGGCAGACATGCGACCGCCGAAA
GTCTCGCCGCTGCGATCGTCGCGGTCCGGAGCGTCCGGCGCAAGGACACC
GACCGACGGATCACATCTGGGCTCCACGCACTCCGCAGAGCAGCAGAATG
CGGGCAACGCCGCTGCCGCCACGATGACTGAAGGAAGAAAGCGCCGCGGC
AACGGCGGTGTCGGCAGCGGGAGCCTCCCCGAAAGTCCCAATGGCGGTAG
CGGCAGCCGAGCTGATGGCGGGAGCCGGCGCAGGCGGCGGCGGGGGGCGA
AGGAACAGCTGGCGGAGAAGGCGCAGTTGGAGGCTCTGCGAATCTCCCAC
AATTACTTCGGACAGCCAGGCCGTGAAAGCTTTTACGCATCGTACAGAGA
GGTGAGCCAAGGATGGAACCTCCACGGCTCTACCGTAGCAGGAGACGCGG
TGGGAGCTGCTGCGGCGTCGCAAACAACCCCTCCTACGGCACGGCTGAGC
CGGACGGACGCGGTCCAGCCCCGCAAGCTTTCTTCAACAGCCGCCGACAA
AGCTGCGGTCGATGCGGTGGTGGTGACGGCGCGGAAGCGACTCACGTCAG
GCCAGTCTGCGCCAATGCTGGCGCTGCGCGCCGGCAGCGCCGGTAGAAGC
GGCGGCGGCGGCGGCGTTGGTGGTGCAAGCGACGAAAAGGAAGCGACGGA
TGCAGACTGCGATGAGCTGAGGGACTGGCAGAATTCCAGCCGCACCAGGT
TCCTGATGGGGTGTGTAGAGGCGGTGCTGGCGCCGCGGGCGTCGATGATG
GTACGCCGGCTGGAGACGACGGCAGTGCGGCTGGGCCATCTCGGCATGGG
GGACCGCCTCGGGGTGGTGCTGGCGCGCTGCCTCGAGGACATGCCCCGCA
TGCGGGAGCTCGACCTCTGCGACAACAGACTGACGGACCGCAGTCTACTG
CCCATCGTAAGGGGCTTGAGCCAGCGGAGCGACCTGACGGCCCTAGACCT
CTCTCAGAACAAGCTCGACGGCGCCACCTCGGGCGAGCTCGCCGAATACT
TTTCCGGCCCAGGGGCGCTACTGACGACGCTCGTGCTGTCGCGGGCCGAC
ATCGACGACGTGGAGGCGGCGATGTTTGTGCGTGCGCTGTGGCCGAGCAA
CACTCTCACCAGTCTGGACCTCTCTCGGAACCTCATCGGCGCACAGGAGA
GCCTCAACTACGTGCGCCCAAGCTTCTACACGGGCGCCGAGGCGATCGCG
GACTGGCTGCAGTCGCCGGGCTGCCGTCTCACCAACCTGGACCTGAGCTG
GAACACAATCAGGCTGGACAGCGCCGTCACGCTGGGTGTGGCGTTGGGCA
AGTGCAGCACGCTTGTCCGGCTGGACCTGGGGTTCAACGGGCTGGGCTGC
CGTGGCGGCGAGGCGCTGGCGGGGGCGCTGCACACCAACTCGGCGCTGAC
GGACCTCAACATCGTCAGCAACGGCATCACGCCCCGCGCCTTCTTCGTTC
TCTGCCAGGCGCTGCTGGTGAATGAGACGCTGCGGAGCATATCGATGGGC
GGCAACCTGCTGGGCCGCGTGGGCGCCCGTGGCGTCATGCAGCTGCCAGC
GGAGCTCGGCGACAAGAAGCTGCGGGTGAGCGTGAATTAG
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