mRNA_P-wetherbeei_contig19237.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19237.1.1
Unique NamemRNA_P-wetherbeei_contig19237.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: A0A836CFJ6_9STRA (60S ribosomal protein L41 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ6_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 6.670e-19
Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 2 
Query:  431 MQIFVKTQG-STLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLA-VGTLADLGVEEADTVTLNLCVNGGMRAKWR 670
            MQIFVKT    +L +D AP+ TV  + A VED EF+PA LQ L CGS QLA   TL   G+EEADT+TL L VNGGMRAKWR
Sbjct:    1 MQIFVKTLARDSLVLDVAPTSTVGDVMAMVEDREFLPAALQRLSCGSTQLASTTTLEAAGIEEADTLTLLLSVNGGMRAKWR 82
[Close]
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: V9EKG6_PHYPR (60S ribosomal protein L41 n=3 Tax=Phytophthora TaxID=4783 RepID=V9EKG6_PHYPR)

HSP 1 Score: 75.5 bits (184), Expect = 3.260e-14
Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 2 
Query:  431 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 670
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+I  +   LVC  +QL  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:    1 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYI--QNFRLVCAGKQLTSGSLADYAVGECDTLKMLLSVNGGMRAKWR 79
[Close]
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: D0NRK6_PHYIT (60S ribosomal protein L41 n=7 Tax=Peronosporaceae TaxID=4777 RepID=D0NRK6_PHYIT)

HSP 1 Score: 75.5 bits (184), Expect = 4.130e-14
Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 2 
Query:  431 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 670
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+I  +   LVC  +QL  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:   10 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYI--QNFRLVCAGKQLTSGSLADYAVGECDTLKMLLSVNGGMRAKWR 88
[Close]
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: W2KP00_PHYPR (60S ribosomal protein L41 (Fragment) n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KP00_PHYPR)

HSP 1 Score: 75.5 bits (184), Expect = 1.430e-13
Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 2 
Query:  431 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 670
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+I  +   LVC  +QL  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:   61 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYI--QNFRLVCAGKQLTSGSLADYAVGECDTLKMLLSVNGGMRAKWR 139
[Close]
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: A0A6A4FFT9_9STRA (60S ribosomal protein L41 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FFT9_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.570e-12
Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 2 
Query:  431 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 670
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+IP     LVC  +QL  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:  831 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYIPNF--RLVCAGKQLTSGSLADYAVGECDTLKMLLDVNGGMRAKWR 909
[Close]
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: A0A8J5JFB2_9STRA (60S ribosomal protein L41 (Fragment) n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JFB2_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.350e-12
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 2 
Query:  431 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 670
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+I  +   LVC  +QL  G+LAD  V E  T+ + L VNGGMRAKWR
Sbjct:   67 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYI--QNFRLVCAGKQLTSGSLADYAVGECATLKMLLSVNGGMRAKWR 145
[Close]
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: A0A833WDI0_PHYIN (60S ribosomal protein L41 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WDI0_PHYIN)

HSP 1 Score: 71.6 bits (174), Expect = 3.010e-12
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 2 
Query:  431 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 670
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+I  +   LV   +QL  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:   48 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYI--QNFRLVSAGKQLTSGSLADYAVGECDTLKMLLSVNGGMRAKWR 126
[Close]
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: A0A6G0NVC9_9STRA (60S ribosomal protein L41 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NVC9_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.780e-12
Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 2 
Query:  431 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 670
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+IP     LVC  +QL  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:  710 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYIPNF--RLVCAGKQLTSGSLADYVVGECDTLKMLLDVNGGMRAKWR 788
[Close]
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: W2PVI0_PHYPN (60S ribosomal protein L41 n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PVI0_PHYPN)

HSP 1 Score: 73.9 bits (180), Expect = 3.930e-12
Identity = 42/81 (51.85%), Postives = 56/81 (69.14%), Query Frame = 2 
Query:  431 MQIFVKT-QGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 670
            MQ+FV+T  GS LT+  A   +VA++K AVED+E+I  +   LVC  ++L  G+LAD  V E DT+ + L VNGGMRAKWR
Sbjct:  179 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYI--QNFRLVCAGKKLTSGSLADYAVGECDTLKMLLSVNGGMRAKWR 257
[Close]
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Match: A0A7S2HF29_9STRA (60S ribosomal protein L41 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HF29_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 7.840e-11
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 2 
Query:  431 MQIFVK-TQGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLAVGTLADLGVEEADTVTLNLCVNGGMRAKWR 670
            MQIF+   QG +         +V ++KA +E+ EF+P+EL  LV G+  L  G+L   GV+E DT+T+ L VNGGMRAKWR
Sbjct:    1 MQIFIAGAQGPSTAYTVDSDASVESVKAMIENREFVPSELIRLVNGATALEGGSLLGNGVQEDDTITMLLEVNGGMRAKWR 81
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19237.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A836CFJ6_9STRA6.670e-1962.2060S ribosomal protein L41 n=1 Tax=Tribonema minus ... [more]
V9EKG6_PHYPR3.260e-1453.0960S ribosomal protein L41 n=3 Tax=Phytophthora Tax... [more]
D0NRK6_PHYIT4.130e-1453.0960S ribosomal protein L41 n=7 Tax=Peronosporaceae ... [more]
W2KP00_PHYPR1.430e-1353.0960S ribosomal protein L41 (Fragment) n=5 Tax=Phyto... [more]
A0A6A4FFT9_9STRA1.570e-1254.3260S ribosomal protein L41 n=9 Tax=Phytophthora Tax... [more]
A0A8J5JFB2_9STRA2.350e-1251.8560S ribosomal protein L41 (Fragment) n=1 Tax=Phyto... [more]
A0A833WDI0_PHYIN3.010e-1251.8560S ribosomal protein L41 n=2 Tax=Phytophthora inf... [more]
A0A6G0NVC9_9STRA3.780e-1254.3260S ribosomal protein L41 n=1 Tax=Phytophthora fra... [more]
W2PVI0_PHYPN3.930e-1251.8560S ribosomal protein L41 n=1 Tax=Phytophthora par... [more]
A0A7S2HF29_9STRA7.840e-1146.9160S ribosomal protein L41 n=1 Tax=Helicotheca tame... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19237contigP-wetherbeei_contig19237:220..892 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LE80
Preferred nameUBB
PFAMsubiquitin
Model size673
Max annot lvl2759|Eukaryota
KEGG koko:K02927,ko:K02977,ko:K04551,ko:K08770
KEGG Pathwayko03010,ko03320,ko04137,ko04144,ko05012,ko05167,map03010,map03320,map04137,map04144,map05012,map05167
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000165,GO:0000187,GO:0000209,GO:0000715,GO:0000731,GO:0000902,GO:0001666,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002224,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002753,GO:0002755,GO:0002756,GO:0002757,GO:0002758,GO:0002764,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005768,GO:0005783,GO:0005789,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006294,GO:0006296,GO:0006297,GO:0006301,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006605,GO:0006625,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0007017,GO:0007018,GO:0007031,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007249,GO:0007254,GO:0007267,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009628,GO:0009653,GO:0009719,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010008,GO:0010033,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010942,GO:0010970,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016055,GO:0016192,GO:0016197,GO:0016310,GO:0016567,GO:0016579,GO:0017015,GO:0018130,GO:0019058,GO:0019068,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019438,GO:0019538,GO:0019867,GO:0019941,GO:0019985,GO:0022008,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030030,GO:0030139,GO:0030154,GO:0030162,GO:0030163,GO:0030182,GO:0030512,GO:0030522,GO:0030659,GO:0030666,GO:0030705,GO:0031090,GO:0031098,GO:0031145,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031347,GO:0031349,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031410,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031984,GO:0032147,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0033036,GO:0033365,GO:0033554,GO:0033674,GO:0033683,GO:0034097,GO:0034613,GO:0034622,GO:0034641,GO:0034643,GO:0034645,GO:0034654,GO:0035556,GO:0035666,GO:0035872,GO:0036211,GO:0036293,GO:0036294,GO:0036297,GO:0036477,GO:0042175,GO:0042176,GO:0042221,GO:0042276,GO:0042325,GO:0042327,GO:0042391,GO:0042769,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043025,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043487,GO:0043488,GO:0043549,GO:0043574,GO:0043618,GO:0043620,GO:0043632,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044297,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044432,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044766,GO:0045088,GO:0045089,GO:0045184,GO:0045859,GO:0045860,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0046483,GO:0046794,GO:0046907,GO:0047497,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048666,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051338,GO:0051347,GO:0051403,GO:0051603,GO:0051606,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051654,GO:0051656,GO:0051704,GO:0051716,GO:0051881,GO:0055085,GO:0060255,GO:0060548,GO:0061013,GO:0061024,GO:0061136,GO:0061418,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070423,GO:0070482,GO:0070498,GO:0070555,GO:0070646,GO:0070647,GO:0070727,GO:0070848,GO:0070887,GO:0070911,GO:0070987,GO:0071310,GO:0071345,GO:0071347,GO:0071363,GO:0071453,GO:0071456,GO:0071495,GO:0071559,GO:0071560,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0071897,GO:0071900,GO:0071902,GO:0071944,GO:0072384,GO:0072594,GO:0072662,GO:0072663,GO:0075733,GO:0080090,GO:0080134,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0090304,GO:0090305,GO:0097458,GO:0097708,GO:0098588,GO:0098805,GO:0098827,GO:0099111,GO:0120025,GO:0120036,GO:0120039,GO:0198738,GO:1901214,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901796,GO:1901798,GO:1902253,GO:1902255,GO:1902525,GO:1902527,GO:1902531,GO:1902533,GO:1902579,GO:1902679,GO:1902680,GO:1903050,GO:1903311,GO:1903320,GO:1903322,GO:1903362,GO:1903506,GO:1903507,GO:1903508,GO:1903844,GO:1903845,GO:1905114,GO:2000112,GO:2000113,GO:2001141,GO:2001233,GO:2001235,GO:2001242,GO:2001244
Exons1
Evalue6.61e-21
EggNOG OGsCOG5272@1|root,KOG0001@2759|Eukaryota
Ec32 ortholog descriptionRibosomal protein L41
Ec32 orthologEc-00_001240.1
Descriptioncellular macromolecule catabolic process
Cds size243
COG categoryO
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04121,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186167.4928753-CDS-P-wetherbeei_contig19237:219..4621683186167.4928753-CDS-P-wetherbeei_contig19237:219..462Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19237 220..462 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186167.506939-UTR-P-wetherbeei_contig19237:462..8921683186167.506939-UTR-P-wetherbeei_contig19237:462..892Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig19237 463..892 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19237.1.1prot_P-wetherbeei_contig19237.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19237 220..462 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19237.1.1

>prot_P-wetherbeei_contig19237.1.1 ID=prot_P-wetherbeei_contig19237.1.1|Name=mRNA_P-wetherbeei_contig19237.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp
MQIFVKTQGSTLTIDAAPSMTVAALKAAVEDLEFIPAELQSLVCGSRQLA
VGTLADLGVEEADTVTLNLCVNGGMRAKWR*
back to top

mRNA from alignment at P-wetherbeei_contig19237:220..892-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19237.1.1 ID=mRNA_P-wetherbeei_contig19237.1.1|Name=mRNA_P-wetherbeei_contig19237.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=673bp|location=Sequence derived from alignment at P-wetherbeei_contig19237:220..892- (Phaeothamnion wetherbeei SAG_119_79)
GAGCTCGTTCGCGAGCGGTGGAAAGACGTAAGGCCCAACACCTGGGCTCG
ATAACTCTGCTGACTGCTCGTCGGGGGTTCGCCACCGGTAAGCGCTGAGA
CGCTCTCTGGGGCTTTTTTGTTCGTCTTAACGAATGGCCACGAGATCCAG
AGTTGTTAGGGTGGGTTTTGAATGGAACGCCGCCCTTGATTTCCAATTTT
CCCGTGTTAACGAATGAGTACCCTGCACAGGCGCGCTCCAGAGTTCGCTT
GGCTTGTCGCACACTCATTGCCTTAGAGCGGCTTTCTTTGGTTGAATCAA
GGCTTTGTGATCGATACATCGCCGGGAACGCCGTCAGCTGTCTTCAGCAT
GCCTCAGCTCATCGTACCGACGCGCACCCGCCTCCTCTCGCCCTTCCACG
GTAGGCTTTGAGCATCCAGAGGCGTCGGCCATGCAGATCTTCGTCAAAAC
CCAGGGGTCGACCTTGACCATCGATGCGGCTCCGTCCATGACGGTCGCGG
CCCTCAAGGCCGCGGTCGAGGACCTTGAGTTCATCCCGGCCGAGCTCCAG
AGCCTCGTGTGCGGCAGCCGCCAGCTCGCCGTCGGCACGCTCGCTGACCT
CGGCGTTGAGGAAGCCGATACCGTGACGCTCAACCTCTGCGTCAACGGCG
GCATGCGCGCCAAGTGGCGGTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig19237:220..892-

>mRNA_P-wetherbeei_contig19237.1.1 ID=mRNA_P-wetherbeei_contig19237.1.1|Name=mRNA_P-wetherbeei_contig19237.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig19237:220..892- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGATCTTCGTCAAAACCCAGGGGTCGACCTTGACCATCGATGCGGC
TCCGTCCATGACGGTCGCGGCCCTCAAGGCCGCGGTCGAGGACCTTGAGT
TCATCCCGGCCGAGCTCCAGAGCCTCGTGTGCGGCAGCCGCCAGCTCGCC
GTCGGCACGCTCGCTGACCTCGGCGTTGAGGAAGCCGATACCGTGACGCT
CAACCTCTGCGTCAACGGCGGCATGCGCGCCAAGTGGCGGTAA
back to top