mRNA_P-wetherbeei_contig19208.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A7Z9PVP0_9BACT (RHS repeat protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PVP0_9BACT) HSP 1 Score: 205 bits (521), Expect = 7.410e-59 Identity = 138/368 (37.50%), Postives = 197/368 (53.53%), Query Frame = 1
Query: 10 DARGEVAVQYSYYSSGDYTGLVENVISYGLTQLNYVYTTD-SDGYATMTVTETDLINTS-SPAKITVTTYDPRQNVLKTVD--------PLGNLWSNEYTDSLNPYLVTRATDPNLQHTDYTYDSQGNVKSVTDAYLNVTTLVYAQETES-PLNPKHRNLVNQIIRPSILVGGVATNYS-TYLYYDANGNLNQVKDAKNQSAYYAHRPDGRLSSVADRNGHITSFDYSPFS-NGVSNLGNLTKITSPSGPNGAPA-REVHFAYDLYDNLLSVTDALGHSISYQWDLNSRMTRTTDAYGKYVENTIVQGLLDHVTLPTNQGSSSNRRQTRFTYDDPGRVLQVLSSINAT-QEQMRVRYEYDSFDRVTKL 1068
D RG V+ ++ Y D +E +SY T++ YVY D S + V + DL T+ P + T T YDP N + D P+ N+ Y D +P+L+T DPNL DY YD+ GNV D N T YA +S P+NPKHRNLV I RP + V GV T Y T L YDANGN++ + DA+++ + DG + ++ DR G+ + F Y + +GVS+ NL ++ P G A R YD YDN+ +VT+ALGH ++ +D R TDA GK LLD V LP N GSSS+ R+T +YD+ R++QV + T +++RV+Y+Y SF ++ +L
Sbjct: 6 DPRGIVSNRFFY----DSFNRLEREVSYDETEIEYVYGFDPSSELDFVEVYQRDLAVTNPEPDRYTYTLYDPFGNPILVADLVDDSGPTPVFNVTQMFYNDPNSPFLMTARLDPNLTIVDYEYDANGNVTKTIDKDGNETLFAYADTVDSSPINPKHRNLVRLITRPDVTVDGVVTTYDDTELQYDANGNVSNIIDARSKVTTMTYTSDGLVETIQDRRGNTSEFVYEGTAFDGVSSR-NLLQVKVPKGLVPADGFRTATMTYDAYDNVATVTNALGHQVTSLFDDLDRPDTVTDARGKVTSFFYQDDLLDEVHLPANNGSSSSVRKTSMSYDNSSRLIQVDRDVATTGPQELRVKYQYSSFSQLKEL 368
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A7Z9PQQ4_9BACT (RHS repeat protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PQQ4_9BACT) HSP 1 Score: 167 bits (424), Expect = 6.790e-42 Identity = 132/404 (32.67%), Postives = 185/404 (45.79%), Query Frame = 1
Query: 10 DARGEVAVQYSYYSSGDYTGLVENVISYGLTQLNYVYT-----TDSDGYATMTVTETDLINTSSPAKITVTTYDPRQNVLKTVDPLGNLWSNEYTDSL--------------------------------NPYLVTRATDPNLQHTDYTYDSQGNVKSVTDAYLNVTTLVYAQETESPLNPKHRNLVNQIIRPSILVGGVATNYS-TYLYYDANGNLNQ---VKDAKNQSAYYAHRPDGRLSSVADRNGHITSFDYS--PFSNGVSNLGNLTKITSPSGPNGAPA-REVHFAYDLYDNLLSVTDALGHSISYQWDLNSRMTRTTDAYGKYVENTIVQGLLDHVTLPTNQGSSS-NRRQTRFTYDDPGRVLQVLSSINATQEQMRVRYEYDSFDRVTKLARLKSG 1086
D RG +A+QY Y D G ++ + YG Y YT + ++ D + T T +D RQ V TV +G + EYT++L NP L T A D L+ + YD+ GN+ +TD T YA +SPLNPKHRNL+ I RP + V G Y T L YD+ GNL + VKDA++ + + DG +V DRNG+ T F YS PF+ NL + +P G N A RE+ YD+Y NL SV D LG+ Y +DL R+T DA + V GLL P N S+ R+T F +D GRV+ + ++TQ RV Y +D ++ +L R+++G
Sbjct: 529 DPRGNIAIQYQY----DPLGRKQSELIYGELYREYEYTFYGVNMYEEDFSIYRPEPPDPNIPNGSGLFTSTNFDDRQRV-STVS-VGYWYYQEYTETLYDEVNDEYYDETYYERLAEEEAFTNYAYTDENNPLLKTLAIDSELREMSWAYDNFGNLTEMTDKEGYTTVYTYADTLDSPLNPKHRNLLRLIQRPEVEVNGAPVTYEPTELVYDSKGNLQEIIDVKDAESFKTIFTYTSDGLPETVTDRNGNTTEFQYSGTPFTKNQPR--NLVLVRTPKGENPADGFREIDMTYDIYSNLESVEDDLGNRFEYTYDLLDRVTDMLDARSQPSSYIYVDGLLTEAFSPPNAASNDLTPRKTTFDHDLFGRVVGIYQQFDSTQVS-RVAYGFDGRSQLRELDRIRNG 923
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A3D1LLU6_9DELT (DUF6531 domain-containing protein n=3 Tax=Geobacteraceae TaxID=213422 RepID=A0A3D1LLU6_9DELT) HSP 1 Score: 65.5 bits (158), Expect = 1.100e-7 Identity = 98/382 (25.65%), Postives = 136/382 (35.60%), Query Frame = 1
Query: 166 DLINTSSPAKITVTTYDPRQ--NVLKTVDPLGNLWSNEYTDSLNPYLVTRATDPNLQHTDYTYDSQGNVKSVTDAYLNVTTLVYAQETESPLNPKHRNLVNQIIRPSILVGGVATNY---------------------------------STY----------------------LYYDANGNLNQVKDAKNQSAYYAHRPDGRLSSVADRNGHITSFDYSPFSNGVSNLGNLTKITSPSGPNGAPAREVHFAYDLYDNLLSVTDALGHSISYQWDLNSRMTRTTDAYGKYVENTI-VQGLLD---HVTLPT----------NQGSSSNRR-----QTRFTYDDPGRVLQVLSSINATQEQMRVRYEYDSFDRVTKLARLKS 1083
DL NT+ K +T D ++ N+L T + Y+ YLVT TDP + T + S G +K +TDA L TT Y +T K + I+ P GV T+Y STY YDAN NLN VKDA+ + Y + + + + D T Y G S PS NGA D L SVTDA HS +Y +D R+ TD GK T G LD + T T N+G + ++ + YD+ GR+ Q S+ N + Y + ++ + RLKS
Sbjct: 537 DLTNTNPAFKNLITRMDDKRGPNILTT--------TYSYSTDAEGYLVTAVTDPAMATTVIRHYSNGKIKDITDANLKQTTYNYYDDTPQNQAAKVVGFLKSIVTPD----GVTTSYYDPSNVNVAYDANGNNIWHVILDKDGVPRKTVISTYDDRNRLQTVTTRAPGQPDIITTYGYDANDNLNSVKDAEQKETKYLFDFNRQTTKITDARLKSTDLVY-----GGSGC--------PSCGNGA------------DKLTSVTDANQHSTTYSYDKVGRLEYETDPLGKKYHYTYHPNGKLDKKYNATSGTDVLQVSYNHNNRGQLTGKQYADGSSVSYGYDENGRI-QTASNAN-------ISYTFSNYTGGSYKGRLKS 873
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A1I6KST7_9GAMM (RHS repeat-associated core domain-containing protein n=1 Tax=Dyella sp. OK004 TaxID=1855292 RepID=A0A1I6KST7_9GAMM) HSP 1 Score: 63.5 bits (153), Expect = 4.040e-7 Identity = 61/224 (27.23%), Postives = 95/224 (42.41%), Query Frame = 1
Query: 526 YDANGNLNQVKDAK---NQSAYYAHRPDGRLSSVADRNGHITSFD----YSPFSNGVSNLGNLTKIT-SPSG--------PNGAPAREVHFAYDLYDNLLSVTDALGHSISYQWDLNSRMTRTTDAYGKYVENTIVQGLLDHVTLPTNQGSSSNRRQTRFTYDDPGRVLQVLSSINATQEQMRVRYEY-DSFDRVTKLARLKSGTEKSFLFEYDILDRQTSSKD 1146
Y+A G + V + N Y + GRL++V D GH+TSFD Y G +T +T +P G G PA +Y+ +++ TDA G +SY +D R+T TDA+G + T+ + + T ++ +R TY+ ++L V+ + N T + Y Y D +D A T YD L R S+ D
Sbjct: 32 YNAQGLVASVDGPRTDVNDVTGYTYDASGRLATVTDAQGHVTSFDTYDTYGHPGRSTDPNGVVTTMTYTPEGWLQSTTRDSTGTPATTT-MSYNAVGDVIQTTDADGVVVSYTYDDARRLTDITDAFGNRIHYTL-DAAGNRLKEETFDSPNTLKRTISHTYNSLSQLLTVVDAFNRTI----LNYNYPDGYDAAGNPAHSSDATGVQRKRGYDALHRLVSTID 249
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: UPI0017474C64 (DNRLRE domain-containing protein n=1 Tax=Hazenella sp. IB182357 TaxID=2771433 RepID=UPI0017474C64) HSP 1 Score: 63.2 bits (152), Expect = 6.510e-7 Identity = 82/336 (24.40%), Postives = 138/336 (41.07%), Query Frame = 1
Query: 205 TTYDPRQNVLKTVDPLGNLWS---NEYTD----SLN--PYLVTRATDPNLQHTDYTYDSQGNVKSVTDAYLNVTTLVYAQETESPLNPKHRNLVNQIIRPSILVGGVATNYSTYLYYDANGNLNQVKDAKNQSA-----YYAHRPDGRLSSVADR-------NGHITSFDYSPFSNGVSNLGNLTKITSPSGPNGAPAREVHFAYDLYDN--LLSVTDALGHSISYQW-DLNSRMTRTTDAYGKYVENTIVQGLLDHVTLPT------NQGSSSNRRQTRFTYDDPGRVLQVLSSINATQEQM-RVRYEYDSFDRVTKLARLKSGTE-KSFLFEYD 1116
T YD N + P GN+ N+YT LN P VT T +++ T YDS GN+ S+TD N TT Y N + ++ S+ + Y Y DA NL +++ + + + L+ + +R +G+ F+ LGNLTK+++P E F Y YDN L + D + YQ+ DL + R + E T+ D L + N G + ++Q + YD ++Q++ ++T Q+ R EY S ++V+++ + G E ++ ++YD
Sbjct: 1730 TAYDEVGNPISVTQPKGNVTEDNPNDYTVRTSYDLNHRPNKVTDVTGKSIEKT---YDSDGNMTSITDKEGNTTTYTY-------------NAIGLLMEESVPHNDQVNRITKYKY-DAVQNLVEIESPRGSATAQTGDFVEKMVYDELNRIKERIFPRDPASGNTRFQTEHKFTYEYDILGNLTKVSAPPSEGQTDRNETVFTY--YDNGLLKGIQDPWEITTQYQYNDLGLQTKRIVSSSDGSQERTMSWNYYDDGKLKSMTDFGLNTGENQ-KKQFEYQYDLHDNLIQMID--HSTDAQIDRYETEYTSLEQVSQIKEILGGNEVRTISYQYD 2043
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A6P2EI96_9BURK (Cell wall-associated polypeptide CWBP200 n=1 Tax=Variovorax sp. PBL-H6 TaxID=434009 RepID=A0A6P2EI96_9BURK) HSP 1 Score: 62.0 bits (149), Expect = 1.460e-6 Identity = 90/346 (26.01%), Postives = 129/346 (37.28%), Query Frame = 1
Query: 178 TSSPAKITVTTYDPRQNVLKTVDPLGNLWSNEYTDSLNPYLVTRATDPNLQHTDYTYDSQGNVKSVTD-AYLNVT----TLVYAQETE--SPLNPKHRNLVNQIIRPSILVG-GVATNYSTYLYYDANGNLNQVKDAKNQSAYYAHRPDGRLS--------------------SVADRNGHITSFDYSPFSNGVSNLGNLTKITSPSGPNGAPAREVHFAYDLYDNLLSVTDALG-HSISYQWDLNSRMTRTT----------DAYGKYVENTIVQGLL-----DHVTLPTNQGSSSNRRQTRFTYDDPGRVLQVLSSINATQEQMRVRYEYDSFDRVTKLARLKS 1083
T + K T YD +K+ G W + VTRA P L T + +TD AY +V T Y T+ + + NL + + + VG +A Y+TY Y NGN++ VKDAKN + + RL+ + D NG++TS + NL ++T+ S PN A V F YDL S A G H+ISY WD R+ TT DA G + T D P+ + + + YDD GR V T ++ ++D LA LK+
Sbjct: 1331 TDAMGKQTRVAYDADGRAVKSAAQQGTQWLVSCSRYSETGKVTRAWGPALTAAATTCPGEAAPTPITDIAYDDVDRPFRTTQYLATTDGGNRVTETVYNLDDSVQAVNKAVGTALAQAYATYSY-TPNGNVDSVKDAKNNLTVHTYDGFDRLARTYYPLPNMPLYGNANDYEENAYDANGNVTSLRKRNGQTIAQSWDNLNRLTARSYPNTAD--NVQFGYDLRGLRTSAQFANGSHAISYAWDNAGRLASTTAGGKTLSHQYDAAGNRIRTTWPDAFYTTTSYDAANRPSVIQENGSVSLASYAYDDLGRRTTVTLGNGTTVQR--------AYDNQGALATLKN 1665
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A1P8WH74_9PLAN (Cell wall-associated polypeptide n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WH74_9PLAN) HSP 1 Score: 62.0 bits (149), Expect = 1.560e-6 Identity = 45/148 (30.41%), Postives = 66/148 (44.59%), Query Frame = 1
Query: 208 TYDPRQNVLKTVDPLGNLWSNEYTDSLNPYLVTRATDPNLQHTDYTYDSQGNVKSVTDAYLNVTTLVYAQETESPLNPKHRNLVNQIIRPSILVGGVATNYSTYLYYDANGNLNQVKDAKNQSAYYAHRPDGRLSSVADRNGHITSFD 651
T++ R NVL DPLG++ Y DS NP L T+ D + TD YD +GN+ + + L + Q + N V I A N++T Y ANGNL ++ +A + SA++ GH+T FD
Sbjct: 3653 TFNDRGNVLTETDPLGSVREYRYEDSRNPDLETKIIDKDGHVTDLVYDGRGNL--LRNIELGPLDDPFDQPIVTIYTYDEGNRVRTITD--------ARNHTTTFRYFANGNLREIVNAADDSAFFXXXXXXXXXXXXXXKGHVTRFD 3790
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A6P2EP71_9BURK (Cell wall-associated polypeptide CWBP200 n=1 Tax=Variovorax sp. PBL-H6 TaxID=434009 RepID=A0A6P2EP71_9BURK) HSP 1 Score: 61.2 bits (147), Expect = 2.560e-6 Identity = 86/335 (25.67%), Postives = 124/335 (37.01%), Query Frame = 1
Query: 211 YDPRQNVLKTVDPLGNLWSNEYTDSLNPYLVTRATDPNLQHTDYTYDSQGNVKSVTD-AYLNV------TTLVYAQETESPLNPKHRNLVNQIIRPSILVG-GVATNYSTYLYYDANGNLNQVKDAKNQSAYYAHRPDGRLS--------------------SVADRNGHITSFDYSPFSNGVSNLGNLTKITSPSGPNGAPAREVHFAYDLYDNLLSVTDALG-HSISYQWDLNSRMTRTT----------DAYGKYVENTIVQGLL-----DHVTLPTNQGSSSNRRQTRFTYDDPGRVLQVLSSINATQEQMRVRYEYDSFDRVTKLARLKS 1083
YD +K+ G W + VTRA P L T + +TD AY +V T + A + + + NL + + + VG +A Y+TY Y NGN++ VKDAKN + + RL+ + D NG++TS + NL ++T+ S PN A V F YDL S A G H+ISY WD R+ T DA G + T D + P+ + N + YDD GR V T ++ +D LA LK+
Sbjct: 1339 YDADGRAVKSAAQQGTQWLVSCSRYSETGKVTRAWGPALTAAATTCPGEAAPTPITDIAYDDVDRPFRTTQYLPAADGGNRVTETIYNLDDTVQAVNKAVGTALAQAYATYTY-TPNGNVDSVKDAKNNLTVHTYDGFDRLARTYYPLPNMPLYGNANDYEENAYDANGNVTSLRKRNGQTIAQSWDNLNRLTARSYPNTAD--NVQFGYDLRGLRTSAQFANGTHAISYAWDNAGRLASTAAGGKTLSHQYDAAGNRIRTTWPDAFYTTTSYDAASRPSVIQENGNVNLASYAYDDLGRRTTVTLGNGTTVQR--------GYDNQGALATLKN 1662
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A7W7XBV0_9ACTN (RHS repeat-associated protein n=3 Tax=Streptomyces TaxID=1883 RepID=A0A7W7XBV0_9ACTN) HSP 1 Score: 60.5 bits (145), Expect = 4.620e-6 Identity = 68/248 (27.42%), Postives = 96/248 (38.71%), Query Frame = 1
Query: 373 VTDAYLNVTTLVYAQETESPLNPKHRNLVNQIIRPSILVGGVATNYSTYLYYDANGNLNQVKDAKNQSAYYAHRPDG-----------RLSSVADRNGHITSFDYSPFSNGVSNLGNLTKITSPSGPNGAPAREV--HFAYDLYDNLLSVTDALGHSISYQWDLNSRMTRTTDAYGKYVENTIVQ-GLLDHVTLPTNQGSSSNRRQTRFTYDDPGRVLQVLS---SINATQEQMRVRYEYDSFDRVTK 1065
V DA NVTT A S + V Q P + G T Y+ YD GNL + K + PD +L SV + G S++Y N+GN + P A + ++DL + VTDA G + ++D +S + R+TD G E Q G +P S S R T+F YD G +V+S + A + R EYD +R K
Sbjct: 1632 VYDANDNVTTSTAADGVVSTAXXXXADQVTQSTGPDNNLSGRTTRYT----YDKVGNLKTTTEPKGVATTSV--PDDYVTTNNYNEIYQLMSVVNAQGDKVSYEYD-------NVGNPVTVIDPKKNATADTTDYTSKSSFDLNHRVTKVTDAAGKFTTSEYDKDSLLVRSTDKEGNVSEVVYDQRGKKIEQRVPY---SGSTLRVTKFEYDQMGNTTKVISPRGTATAAVDDFTSRTEYDKLNRPVK 1863
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Match: A0A1F8U516_9FIRM (DUF6531 domain-containing protein (Fragment) n=1 Tax=Clostridiales bacterium GWB2_37_7 TaxID=1797677 RepID=A0A1F8U516_9FIRM) HSP 1 Score: 59.7 bits (143), Expect = 7.570e-6 Identity = 58/278 (20.86%), Postives = 111/278 (39.93%), Query Frame = 1
Query: 508 YSTYLYYDANGNLNQVKDAKNQSAYYAHRPDGRLSSVADRNGHITSFDYSPFSNGVSNLGNLTKITSPS---------GPN----------GAPAREVHFAYDLYDNLLSVTDALGH--SISYQWDLNS-----RMTRTTDAYG-------KYVENTIVQGLLDHVTLPTNQGSSSNRRQ-----------------TRFTYDDPGRVLQVLS---SINATQEQMRVRYEYDSFDRVTKLARLKSGTEKSFLFEYDILDRQTSSKDPLLRETTTAYQP 1182
+ T Y++ +G LN + D N S +A+ DG + + D +G F+Y+ G LT IT + G N G E + YD ++NL+++TDALG+ +++Y +D+N ++ + G +Y G++ VT P ++ + T++ +D+ +++V+ + ++ + YD+ V ++ K+ +S + YD + D R T AY P
Sbjct: 528 FGTRYYFNTSGKLNHITDTNNNSTTFAYLGDGNIDRITDPSGREVVFNYTS--------GKLTSITGSNITTVEYAFTGNNLTSMKKKDASGTILTEESYGYDTWNNLITITDALGNVTTMTYSYDVNLDRRIYKVEKKLTIDGVLETLTTQYTYAIAADGIITTVTDPKSKITEYKTNNMGNVVKIIEDMCGLNINTQYLWDEQQNLVEVIDPKGEVELDPDKYKTVLNYDAKGDVKRIVNPKN---QSSTYNYDTKSNPVNINDFAGRPTVNAYDP 794 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19208.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19208.2.1 >prot_P-wetherbeei_contig19208.2.1 ID=prot_P-wetherbeei_contig19208.2.1|Name=mRNA_P-wetherbeei_contig19208.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=403bp QRKDARGEVAVQYSYYSSGDYTGLVENVISYGLTQLNYVYTTDSDGYATMback to top mRNA from alignment at P-wetherbeei_contig19208:88..1296+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19208.2.1 ID=mRNA_P-wetherbeei_contig19208.2.1|Name=mRNA_P-wetherbeei_contig19208.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1209bp|location=Sequence derived from alignment at P-wetherbeei_contig19208:88..1296+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19208:88..1296+ >mRNA_P-wetherbeei_contig19208.2.1 ID=mRNA_P-wetherbeei_contig19208.2.1|Name=mRNA_P-wetherbeei_contig19208.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1209bp|location=Sequence derived from alignment at P-wetherbeei_contig19208:88..1296+ (Phaeothamnion wetherbeei SAG_119_79)back to top |