mRNA_P-wetherbeei_contig1920.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1920.1.1
Unique NamemRNA_P-wetherbeei_contig1920.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1920.1.1 vs. uniprot
Match: A0A7R9TMA8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TMA8_9VIRI)

HSP 1 Score: 177 bits (449), Expect = 2.760e-49
Identity = 95/185 (51.35%), Postives = 127/185 (68.65%), Query Frame = 3
Query:  546 SDVVNAVIATKPLYDLLKVGARSVLIRSAETNGVAWRVESARLLAREAELEARRKRLADP--ATEYPEYYLRQFHAYQEGNLNWLAASECEAATYSMANRVWPDAGLSSEVAQQRMRDCSATATLEYLAANRLPLP-------KRILEAGCSVGISTSYLQDAFPEAEITGLDLSPHFLAVAELR 1073
            S  VN  IATKP++ ++K  AR  LI++AE NG+ WR E+A  LA +AE+ A ++++ D   A  YP+YYL++FHAY EGNLNW AASE ++ATYSMA RVWP   L+ E AQ+R+RD    +   Y+ A+            KR+L+ GCSVGIST  L +AFP+A++TG+DLSPHFLAVA  R
Sbjct:   14 SKAVNLAIATKPVFSVMKYMARDTLIKTAEKNGIPWR-ETAAALAEDAEVVAMKEQVEDAEVAANYPDYYLQEFHAYDEGNLNWQAASEAQSATYSMALRVWPKEDLTPEQAQRRLRDSWLDSLRAYMGAHADGTGGMAWGDVKRVLDVGCSVGISTRALAEAFPDAKVTGVDLSPHFLAVAATR 197          
BLAST of mRNA_P-wetherbeei_contig1920.1.1 vs. uniprot
Match: A0A7S0WJH7_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WJH7_9CHLO)

HSP 1 Score: 174 bits (441), Expect = 1.580e-47
Identity = 94/177 (53.11%), Postives = 122/177 (68.93%), Query Frame = 3
Query:  546 SDVVNAVIATKPLYD-LLKVGARSVLIRSAETNGVAWRVESARLLAREAELEARRKRLADPATEYPEYYLRQFHAYQEGNLNWLAASECEAATYSMANRVWPDAGLSSEVAQQRMRDCSATATLEYLAANRLPLPKRILEAGCSVGISTSYLQDAFPEAEITGLDLSPHFLAVAELR 1073
            S +VNA I+   LY+ ++K  AR  LI++AE NGV WR ++++L A E E+ +   +L DP  +YP+YYL+ FHAY EGNL W AA E E+ATYSMA RVWPD G+  E AQ R+R         ++  + LP PKRI++AGCSVGIST  +  AFPEAE+TGLDLSP+ LAVA  R
Sbjct:   62 SKIVNAAISNAVLYEGIMKPMARRTLIKTAEKNGVQWRDDASKLEATE-EVYSLYNKLRDPTVKYPDYYLQPFHAYTEGNLCWQAAFEAESATYSMALRVWPDEGMKWEGAQDRLRASYVGCITAHIKDHNLPSPKRIVDAGCSVGISTRAVHAAFPEAEMTGLDLSPNMLAVATYR 237          
BLAST of mRNA_P-wetherbeei_contig1920.1.1 vs. uniprot
Match: A0A7S0KK20_9CHLO (Hypothetical protein n=3 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KK20_9CHLO)

HSP 1 Score: 168 bits (425), Expect = 1.810e-45
Identity = 97/184 (52.72%), Postives = 123/184 (66.85%), Query Frame = 3
Query:  528 AGGGWTSDVVNAVIATKPLYD-LLKVGARSVLIRSAETNGVAWRVESARLLAREAELEARRKRLADPATEYPEYYLRQFHAYQEGNLNWLAASECEAATYSMANRVWPDAGLSSEVAQQRMRDCSATAT----LEYLAANRLPLPKRILEAGCSVGISTSYLQDAFPEAEITGLDLSPHFLAVA 1064
            AG    S +V+A I  + LY+ ++K  AR  LI +AE NG+AWR E+A+L A +A  E     L + A +YPEYYL+ FHAY EGNL WLAA E ++ATYSMA RVWP   +++E AQQR+RD           +Y A   +  PK+IL+ GCSVG+ST YL DAFP AEITGLDLSP+ LAVA
Sbjct:   32 AGDDMLSKLVDAAIGNELLYEKIMKPMARQTLINTAEKNGIAWRDEAAKLEANKAIYETYNA-LKNDAIDYPEYYLKPFHAYAEGNLCWLAAFEAKSATYSMALRVWPKDRITAEEAQQRLRDSYTDMVRAHRTKYNAEGEVE-PKKILDIGCSVGMSTRYLSDAFPTAEITGLDLSPYMLAVA 213          
BLAST of mRNA_P-wetherbeei_contig1920.1.1 vs. uniprot
Match: Q00XI9_OSTTA (Methyltransferase type 11 n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=Q00XI9_OSTTA)

HSP 1 Score: 165 bits (417), Expect = 4.760e-44
Identity = 92/187 (49.20%), Postives = 126/187 (67.38%), Query Frame = 3
Query:  528 AGGGWTSDVVNAVIATKPLYD-LLKVGARSVLIRSAETNGVAWRVESARLLAREAELEARRKRLADPATEYPEYYLRQFHAYQEGNLNWLAASECEAATYSMANRVWPDAGLSSEVAQQRMRDCSATATLE-----YLAANRLPLPKRILEAGCSVGISTSYLQDAFPEAEITGLDLSPHFLAVAEL 1070
            AG    S +V+A I+ + LY+ ++K  AR  LI +AE NG+AWR E A+ L    ++ A  + + D + +YPEYYL+ FHAY EGNL WLAA+E  +ATYSMA RVWP   +++E AQQR+RD S T T+      + A+     P++IL+ GCSVG+ST Y+ DAFP AE+ GLDLSP+ LAVA +
Sbjct:   60 AGDDVLSKLVDAAISNELLYENVMKPMARRTLINTAEKNGIAWR-EEAKALEANPDIHAAFESIKDDSLKYPEYYLKPFHAYAEGNLCWLAATEARSATYSMALRVWPKDRITAETAQQRLRD-SYTDTIRKHRETHNASTGEAEPRKILDVGCSVGMSTRYISDAFPSAEVIGLDLSPYMLAVASV 244          
BLAST of mRNA_P-wetherbeei_contig1920.1.1 vs. uniprot
Match: A4S629_OSTLU (Methyltransf_11 domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S629_OSTLU)

HSP 1 Score: 164 bits (416), Expect = 5.290e-44
Identity = 96/187 (51.34%), Postives = 127/187 (67.91%), Query Frame = 3
Query:  528 AGGGWTSDVVNAVIATKPLYD-LLKVGARSVLIRSAETNGVAWRVESARLLAREAELEARRKRLADPATEYPEYYLRQFHAYQEGNLNWLAASECEAATYSMANRVWPDAGLSSEVAQQRMRDCSATATL-----EYLAANRLPLPKRILEAGCSVGISTSYLQDAFPEAEITGLDLSPHFLAVAEL 1070
            AG    S +V+A I+ + LY+ ++K  AR  LI++AE NG+ WR E+ RL       EA  + + D + EYPEYYL+ FHAY EGNL WLAA+E  +ATYSMA RVWP   +++E AQQR+RD S T T+     +Y  A  +  PK+IL+ GCSVG+ST YL +AFP+AEI GLDLSP+ LAVA +
Sbjct:   50 AGDDALSKLVDAAISNELLYENIMKPMARRTLIQTAEKNGIQWRDEAKRLEGDSRVYEAF-EAIKDDSIEYPEYYLKPFHAYSEGNLCWLAATEARSATYSMALRVWPKDRITAETAQQRLRD-SYTDTVRAHREKYNEATDVE-PKKILDVGCSVGMSTRYLSEAFPQAEIVGLDLSPYMLAVASV 233          
BLAST of mRNA_P-wetherbeei_contig1920.1.1 vs. uniprot
Match: A0A1Y5IDK6_OSTTA (CMV 1a interacting protein 1 n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IDK6_OSTTA)

HSP 1 Score: 165 bits (417), Expect = 9.880e-44
Identity = 92/187 (49.20%), Postives = 126/187 (67.38%), Query Frame = 3
Query:  528 AGGGWTSDVVNAVIATKPLYD-LLKVGARSVLIRSAETNGVAWRVESARLLAREAELEARRKRLADPATEYPEYYLRQFHAYQEGNLNWLAASECEAATYSMANRVWPDAGLSSEVAQQRMRDCSATATLE-----YLAANRLPLPKRILEAGCSVGISTSYLQDAFPEAEITGLDLSPHFLAVAEL 1070
            AG    S +V+A I+ + LY+ ++K  AR  LI +AE NG+AWR E A+ L    ++ A  + + D + +YPEYYL+ FHAY EGNL WLAA+E  +ATYSMA RVWP   +++E AQQR+RD S T T+      + A+     P++IL+ GCSVG+ST Y+ DAFP AE+ GLDLSP+ LAVA +
Sbjct:   93 AGDDVLSKLVDAAISNELLYENVMKPMARRTLINTAEKNGIAWR-EEAKALEANPDIHAAFESIKDDSLKYPEYYLKPFHAYAEGNLCWLAATEARSATYSMALRVWPKDRITAETAQQRLRD-SYTDTIRKHRETHNASTGEAEPRKILDVGCSVGMSTRYISDAFPSAEVIGLDLSPYMLAVASV 277          
BLAST of mRNA_P-wetherbeei_contig1920.1.1 vs. uniprot
Match: A0A0G4EUT4_VITBC (Methyltransf_11 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EUT4_VITBC)

HSP 1 Score: 160 bits (404), Expect = 7.230e-42
Identity = 93/197 (47.21%), Postives = 119/197 (60.41%), Query Frame = 3
Query:  528 AGGGWTSDVVNAVIATKPLYDLLKVGARSVLIRSAETNGVAWRVESARLLARE--AELEARRKRLADPATEYPEYYLRQFHAYQE-GNLNWLAASECEAATYSMANRVWPDAGLSSEVAQQRMRDCSATATLEYLAANRLPLPK------------RILEAGCSVGISTSYLQDAFPEAEITGLDLSPHFLAVAELR 1073
            AG    SDVVNAVI  K L  + K+GAR  +I +AE NG+AW  E  R+   +  AELE+   R  D    YP+YY   FH Y   GNLNWLAASE E+A Y M+ R+WP  GL+   AQQR+R     A  ++   +R  L              RIL+ GCSVG+ST YL++AFP A++ G+DLSPHFLAVA++R
Sbjct:   60 AGKSMLSDVVNAVINNKVLGGIAKLGARRAMISTAEDNGIAWSKEVERMAQPQVRAELESA-MRAVDGNIAYPDYYRESFHGYDSPGNLNWLAASEAESAAYVMSMRIWPKEGLTPPAAQQRVRAEVTDAVRDFAERHRQQLGGVYNTLTNQGTNGRILDVGCSVGLSTRYLRNAFPRADLAGVDLSPHFLAVAQMR 255          
BLAST of mRNA_P-wetherbeei_contig1920.1.1 vs. uniprot
Match: A0A2W1JHG0_9CYAN (Demethylmenaquinone methyltransferase n=1 Tax=Acaryochloris thomasi RCC1774 TaxID=1764569 RepID=A0A2W1JHG0_9CYAN)

HSP 1 Score: 157 bits (398), Expect = 7.460e-42
Identity = 91/182 (50.00%), Postives = 118/182 (64.84%), Query Frame = 3
Query:  528 AGGGWTSDVVNAVIATKPLYDLLKVGARSVLIRSAETNGVAWRVESARLLAREAELEARRKRLADPATEYPEYYLRQFHAYQEGNLNWLAASECEAATYSMANRVWPDAGLSSEVAQQRMRDCSATATLEYLAANRLPLPKRILEAGCSVGISTSYLQDAFPEAEITGLDLSPHFLAVAELR 1073
            AGG W S  VN +I TKP+Y ++K  AR VLI++AETNG+ WR    +L A   +L    + +  P T YP+YY   FHAY EGNL W AA E E+ATYSMA RVWP   L+ E AQ R+R    ++  + LA +     +RIL+ GCSVG+ST  LQ  +P+A+  GLDLSPH L+VA+LR
Sbjct:   17 AGGDWLSRFVNLLIQTKPIYSVMKQQARRVLIKTAETNGIPWRQNYEQLEASNVKLLL--ETVERPVT-YPDYYQVPFHAYAEGNLCWPAAFEAESATYSMALRVWPQEDLTWEDAQARLR----SSFHQVLAEHGPRQVERILDIGCSVGVSTLMLQRFYPQAKTIGLDLSPHMLSVAKLR 191          
BLAST of mRNA_P-wetherbeei_contig1920.1.1 vs. uniprot
Match: A0A7S4GIQ0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GIQ0_9EUGL)

HSP 1 Score: 161 bits (407), Expect = 1.480e-41
Identity = 93/188 (49.47%), Postives = 121/188 (64.36%), Query Frame = 3
Query:  528 AGGGWTSDVVNAVIATKPLYDLLKVGARSVLIRSAETNGVAWRVESARLLA--REAELEARRKRLADPATEYPEYYLRQFHAYQEGNLNWLAASECEAATYSMANRVWPD---AG-LSSEVAQQRMRDCSATATLEYLAANRLPLPKRILEAGCSVGISTSYLQDAFPEAEITGLDLSPHFLAVAELR 1073
            AG G  S +VN +I + PLY ++K GAR  LI SAE NGVAWR ++    A    A+ E   + L DP   YP+YY + FHAY EGNL WL A ECE AT SM  RVW D   AG L S  AQQR+R+    A  +Y  ++++ +   IL+ GCSVG+ST Y+ + +P++ ITGLDLSP+FLAVA+ R
Sbjct:  180 AGEGVLSRIVNGLIKS-PLYPVMKRGARDTLINSAEKNGVAWRQQTREWAAGPNMAKAEKAFEELNDPTIVYPDYYTKPFHAYSEGNLGWLPAFECEPATMSMGLRVWKDEVKAGTLKSGAAQQRLREGYLNAVKDYSDSHKMEIHD-ILDVGCSVGVSTEYIAEKWPQSRITGLDLSPYFLAVAKCR 365          
BLAST of mRNA_P-wetherbeei_contig1920.1.1 vs. uniprot
Match: C1DZE2_MICCC (CMV 1a interacting protein 1 n=2 Tax=Micromonas TaxID=38832 RepID=C1DZE2_MICCC)

HSP 1 Score: 156 bits (395), Expect = 5.820e-41
Identity = 88/183 (48.09%), Postives = 117/183 (63.93%), Query Frame = 3
Query:  528 AGGGWTSDVVNAVIATKPLYD-LLKVGARSVLIRSAETNGVAWRVESARLLAREAELEARRKRLADPATEYPEYYLRQFHAYQEGNLNWLAASECEAATYSMANRVWPDAGLSSEVAQQRMRDCSATATLEYLAANRLPLPKRILEAGCSVGISTSYLQDAFPEAEITGLDLSPHFLAVAELR 1073
            AG    S VV+A I+ K LY+ ++K  AR  LI +AE NGVAWR + A  L  E  ++     + + + EYPEYYL+ FHAY EGNL W AA E E ATYSMA RVWP   ++++ AQ+R+RD    A   ++       P  I++ GCSVGIST Y+ DAFP +++ GLDLSP+ LAVA+ R
Sbjct:   50 AGDDLLSKVVDAAISNKVLYEGIMKPMARRTLINTAEKNGVAWR-DIAEELGNEPAVKQAFDEIENKSVEYPEYYLQPFHAYAEGNLCWQAAVEAEPATYSMALRVWPKDRITADAAQKRLRDSYTGALRAHVDEYYGKEPDTIVDVGCSVGISTRYISDAFPNSKMVGLDLSPYMLAVAKHR 231          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1920.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R9TMA8_9VIRI2.760e-4951.35Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S0WJH7_9CHLO1.580e-4753.11Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S0KK20_9CHLO1.810e-4552.72Hypothetical protein n=3 Tax=Ostreococcus mediterr... [more]
Q00XI9_OSTTA4.760e-4449.20Methyltransferase type 11 n=1 Tax=Ostreococcus tau... [more]
A4S629_OSTLU5.290e-4451.34Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A1Y5IDK6_OSTTA9.880e-4449.20CMV 1a interacting protein 1 n=1 Tax=Ostreococcus ... [more]
A0A0G4EUT4_VITBC7.230e-4247.21Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A2W1JHG0_9CYAN7.460e-4250.00Demethylmenaquinone methyltransferase n=1 Tax=Acar... [more]
A0A7S4GIQ0_9EUGL1.480e-4149.47Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
C1DZE2_MICCC5.820e-4148.09CMV 1a interacting protein 1 n=2 Tax=Micromonas Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1920contigP-wetherbeei_contig1920:396..2169 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog70448.Q00XI9
PFAMsMethyltransf_11
Model size1073
Max annot lvl3041|Chlorophyta
Hectar predicted targeting categoryother localisation
Exons3
Evalue6.61e-47
EggNOG OGsCOG0500@1|root,KOG1269@2759|Eukaryota,388Q2@33090|Viridiplantae,34PC7@3041|Chlorophyta
DescriptionMethyltransferase small domain
Cds size606
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186166.4139457-CDS-P-wetherbeei_contig1920:395..5011683186166.4139457-CDS-P-wetherbeei_contig1920:395..501Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1920 396..501 -
1683186166.4254842-CDS-P-wetherbeei_contig1920:974..11651683186166.4254842-CDS-P-wetherbeei_contig1920:974..1165Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1920 975..1165 -
1683186166.442142-CDS-P-wetherbeei_contig1920:1393..17021683186166.442142-CDS-P-wetherbeei_contig1920:1393..1702Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1920 1394..1702 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186166.4538713-UTR-P-wetherbeei_contig1920:1702..21691683186166.4538713-UTR-P-wetherbeei_contig1920:1702..2169Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1920 1703..2169 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1920.1.1prot_P-wetherbeei_contig1920.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1920 396..1702 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1920.1.1

>prot_P-wetherbeei_contig1920.1.1 ID=prot_P-wetherbeei_contig1920.1.1|Name=mRNA_P-wetherbeei_contig1920.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=202bp
MPKNSATAAVVSMQIYLFLHAGGGWTSDVVNAVIATKPLYDLLKVGARSV
LIRSAETNGVAWRVESARLLAREAELEARRKRLADPATEYPEYYLRQFHA
YQEGNLNWLAASECEAATYSMANRVWPDAGLSSEVAQQRMRDCSATATLE
YLAANRLPLPKRILEAGCSVGISTSYLQDAFPEAEITGLDLSPHFLAVAE
LR
back to top

mRNA from alignment at P-wetherbeei_contig1920:396..2169-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1920.1.1 ID=mRNA_P-wetherbeei_contig1920.1.1|Name=mRNA_P-wetherbeei_contig1920.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1774bp|location=Sequence derived from alignment at P-wetherbeei_contig1920:396..2169- (Phaeothamnion wetherbeei SAG_119_79)
GTATCGCTGCCGTCCTCTTTGGATGTAGCTGTGAAAGAGTGGCGTCTCTT GCCACGAACGTGCCTCTCAACAAACCGAAATGGGCAGGTGTGTGCATGCA TGTTGGGGCCGGTTTCGTTTGCATGCGTCGCGGTCATCAAAGTATTGATA TTGTATCTTCCGCTTTCTGGCCGCGACCTGGGTCTAGGCCTTTTCTTATG TCTACCTCAGTTTTGTGCTTTCTTCTCGTTCTTCATGTTTTCGATGCAAG GGTTTGATGTTATGGCGTAAAGTCTTCCTTTCTGGAAAAAGCATCCGTGT ACCTTAGCTTTGCACAAAGATCGGCCCTATCTGGAAGCTGGCGGTGCTAC CTTTTCCCCCCCTTCTGAAGCTTCTGTTGTAAGGGCGGCTTCTAGGCATC AAGCAGTCGTTAAGCGTATCAAAACCTTCGTCCTCGCCCGAATCACTCAA CAAGAAAGCGTTCGTCGATGCCAAAGAATTCGGCGACTGCAGCTGTTGTG TCGATGCAAATCTATCTTTTCCTCCACGCAGGCGGCGGCTGGACGAGCGA TGTCGTCAACGCCGTCATCGCGACGAAGCCGCTCTACGACCTGCTGAAGG TCGGCGCCCGCAGCGTCCTGATCCGCTCGGCTGAAACAAACGGCGTCGCG TGGCGGGTGGAGAGTGCGCGGCTCCTGGCACGCGAAGCGGAGCTCGAGGC ACGGCGGAAACGACTCGCCGACCCGGCCACCGAATACCCAGAATACTACT TGCGACAGTTTCACGCCTACCAAGAGGTGAGAGGTTGGGTTGGCAACAAG GCTGCTTCGAGCAGCTTTTGGAGCGACGCTTTCAATACAGTACTTCATGA AGCTTCATGGGCACAATTTGAATGACAACAAATCTTCGTCCATTTCTTCT CGATCTCAACTATGACATTTAAAAGAACCAAAGCGAGGTACTATTAACGC TTCGGTTGCTTGCCCTGGCACCCGCACGCGCTCACACCCTTAATACACAA ATAGGGCAATCTGAACTGGCTGGCGGCATCGGAGTGCGAGGCGGCAACGT ACTCGATGGCCAACCGCGTGTGGCCCGATGCCGGCCTCAGTAGCGAGGTG GCACAGCAGCGGATGCGGGACTGCTCCGCCACGGCGACCCTTGAGTATCT GGCGGCCAACAGGCTCCCCCTGCCCAAGCGGATCCTCGAGGCCGGGTGAG AGAAAGGCGTCTCGCTGTTCGGCTCGTTTGTTGAGTTCGCTCTGGTCTTG GGCATTCGGAAAAGACTGTGGAACGCAATCATTTATCCGAGGCAGCCATT GGTCTGCGGTGTTCGTTCATATGAGGATGCTGACAGATTGGTGGACCTGA ACTTGCAGAACTGCGGGTTTCTGGAGCGCTGACCGTAGCGGCCTTCATCT GAGAATTAAGATCTATGATTATTGTGCGCGTCGACCTGTCAAGTATCCTG GCATCTGGCTTTTGCCGCTGCAGACAACAGCGCTGCTTCGTCCCATGTAT TCCACGCACTATTGCCGATCAGTTGCAGCGTCCGCCGTTCCGGCGCTTCT CTTTCAGTGTTGGCACGACCTTTGAGCCCTCCATATCCATCCCATATTGG TTTCCCAACTAAACGCCACCAGTCTATCCTTTTTTTGGTTCCTGACCCAT GAAATTTCCGTGCGCCAGTTGCTCTGTGGGCATCTCGACGTCGTACCTGC AAGATGCGTTTCCCGAGGCGGAAATCACCGGGCTGGACCTTTCCCCGCAC TTCCTCGCCGTGGCGGAGCTGCGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1920:396..2169-

>mRNA_P-wetherbeei_contig1920.1.1 ID=mRNA_P-wetherbeei_contig1920.1.1|Name=mRNA_P-wetherbeei_contig1920.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig1920:396..2169- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCAAAGAATTCGGCGACTGCAGCTGTTGTGTCGATGCAAATCTATCT
TTTCCTCCACGCAGGCGGCGGCTGGACGAGCGATGTCGTCAACGCCGTCA
TCGCGACGAAGCCGCTCTACGACCTGCTGAAGGTCGGCGCCCGCAGCGTC
CTGATCCGCTCGGCTGAAACAAACGGCGTCGCGTGGCGGGTGGAGAGTGC
GCGGCTCCTGGCACGCGAAGCGGAGCTCGAGGCACGGCGGAAACGACTCG
CCGACCCGGCCACCGAATACCCAGAATACTACTTGCGACAGTTTCACGCC
TACCAAGAGGGCAATCTGAACTGGCTGGCGGCATCGGAGTGCGAGGCGGC
AACGTACTCGATGGCCAACCGCGTGTGGCCCGATGCCGGCCTCAGTAGCG
AGGTGGCACAGCAGCGGATGCGGGACTGCTCCGCCACGGCGACCCTTGAG
TATCTGGCGGCCAACAGGCTCCCCCTGCCCAAGCGGATCCTCGAGGCCGG
TTGCTCTGTGGGCATCTCGACGTCGTACCTGCAAGATGCGTTTCCCGAGG
CGGAAATCACCGGGCTGGACCTTTCCCCGCACTTCCTCGCCGTGGCGGAG
CTGCGG
back to top