mRNA_P-wetherbeei_contig192.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig192.4.1
Unique NamemRNA_P-wetherbeei_contig192.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig192.4.1 vs. uniprot
Match: A0A836CKM9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKM9_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.650e-13
Identity = 43/84 (51.19%), Postives = 51/84 (60.71%), Query Frame = 2 
Query:  911 TFGPLTADDAPIVNDHWRFKKSGSLEMTEAMIARGPTVGARVDGQLASWCLVYHDLNALGMLFTRKEWRGRGLAKAVVIRLLRE 1162
            T   L   D   VND W++K   S  M + ++A  PTV  RV G LASWCLVY +  ALGMLFTR E+RGRGLA   V  L R+
Sbjct:  749 TLDALREGDVDAVNDTWKYKSPTSRAMVQWLVAHKPTVAVRVRGALASWCLVY-EYGALGMLFTRPEFRGRGLATVAVAHLTRQ 831
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BLAST of mRNA_P-wetherbeei_contig192.4.1 vs. uniprot
Match: A0A151Z364_9MYCE (N-acetyltransferase domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z364_9MYCE)

HSP 1 Score: 78.6 bits (192), Expect = 2.090e-12
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 2 
Query:  878 LMVHEVLGDHVTFGPLTADDAPIVNDHWRFKKSGSLEMTEAMIARGPTVGARVDGQLASWCLVYHDLNALGMLFTRKEWRGRGLAKAVVIRLL 1156
            L+ H    D     PLT +DA +VNDHW++K S SL+        G +VG R+DG+L SW +  +D  ++G L+T +E+RGRGLAK +V +++
Sbjct:  165 LLRHNSSSDQ-NIQPLTIEDAEVVNDHWKYKNSISLQYMRWACNNGISVGYRLDGKLVSWIIFCND-GSIGNLYTLEEYRGRGLAKKIVSKII 255
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BLAST of mRNA_P-wetherbeei_contig192.4.1 vs. uniprot
Match: A0A0A1WPH3_ZEUCU (Glycine N-acyltransferase-like protein 2 n=2 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WPH3_ZEUCU)

HSP 1 Score: 59.7 bits (143), Expect = 4.310e-6
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 2 
Query:  920 PLTADDAPIVNDHWRFKKSGSLEMTEAMIARGPTVGAR--VDGQLASWCLVYHDLNALGMLFTRKEWRGRGLAKAVVIRLLR 1159
            PLT +D   V+D+W +K  GSL +   +I    T+GA     G+L +W +V+ +L  L +L+ +  +R RGLA+ +VIR+ R
Sbjct:  165 PLTLNDVKEVDDYWPYKSDGSLYIISRLIKYNLTLGAYHPESGELCAW-VVHSELGTLALLYVKNNYRRRGLAEDLVIRMCR 245
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BLAST of mRNA_P-wetherbeei_contig192.4.1 vs. uniprot
Match: A0A419T506_9FIRM (N-acetyltransferase domain-containing protein n=1 Tax=Thermohalobacter berrensis TaxID=99594 RepID=A0A419T506_9FIRM)

HSP 1 Score: 57.4 bits (137), Expect = 1.380e-5
Identity = 38/119 (31.93%), Postives = 60/119 (50.42%), Query Frame = 2 
Query:  812 WADHCGFYALRGGRLPEGNYDALMV-HEVLGDHVTFGPLTADDAPIVNDHWRFKKSGSLEMTEAMIARGPTVGARVD-GQLASWCLVYHDLNALGMLFTRKEWRGRGLAKAVVIRLLRE 1162
            W +HC  Y L      E N D   + H+V         L  +DA IVN ++ +K   SLE  +  I   PT     + G   SW +V  D  ++G+++T+KE RG+GLA ++ + L ++
Sbjct:   97 WEEHCFLYYL-----DEKNIDTSRIKHDVK-------ELKLEDAEIVNKYYTYKSEHSLEYIKRCIEERPTSAIYDENGNPISWAVVRED-GSMGIMYTKKEHRGKGLALSITLDLAKK 202
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BLAST of mRNA_P-wetherbeei_contig192.4.1 vs. uniprot
Match: A0A0K8UM07_BACLA (N-acetyltransferase domain-containing protein n=1 Tax=Bactrocera latifrons TaxID=174628 RepID=A0A0K8UM07_BACLA)

HSP 1 Score: 54.7 bits (130), Expect = 9.390e-5
Identity = 28/82 (34.15%), Postives = 49/82 (59.76%), Query Frame = 2 
Query:  920 PLTADDAPIVNDHWRFKKSGSLEMTEAMIARGPTVGAR--VDGQLASWCLVYHDLNALGMLFTRKEWRGRGLAKAVVIRLLR 1159
            PLT +D   V+D W +K +GS  +    I    ++GA     G+L +W +++ +L  LG+L+ +  +R RGLA+ +V+R+ R
Sbjct:   84 PLTLNDVKEVDDFWPYKSAGSPYIISRNIKYNLSMGAYHPESGELCAW-VIHSELGTLGLLYVKNNYRRRGLAEDLVVRICR 164
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig192.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A836CKM9_9STRA3.650e-1351.19P-loop containing nucleoside triphosphate hydrolas... [more]
A0A151Z364_9MYCE2.090e-1241.94N-acetyltransferase domain-containing protein n=1 ... [more]
A0A0A1WPH3_ZEUCU4.310e-637.80Glycine N-acyltransferase-like protein 2 n=2 Tax=Z... [more]
A0A419T506_9FIRM1.380e-531.93N-acetyltransferase domain-containing protein n=1 ... [more]
A0A0K8UM07_BACLA9.390e-534.15N-acetyltransferase domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig192contigP-wetherbeei_contig192:5569..7688 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1408422.JHYF01000009_gene1960
PFAMsFR47
Model size1564
Max annot lvl186801|Clostridia
Hectar predicted targeting categoryother localisation
Exons4
Evalue4.76e-10
EggNOG OGsCOG3393@1|root,COG3393@2|Bacteria,1VBKV@1239|Firmicutes,24M6Z@186801|Clostridia,36P7D@31979|Clostridiaceae
Ec32 ortholog descriptionAcyl-CoA N-acyltransferase
Ec32 orthologEc-27_004570.1
DescriptionFR47-like protein
Cds size1311
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig192.4.1prot_P-wetherbeei_contig192.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig192 5644..7510 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186166.0381184-UTR-P-wetherbeei_contig192:5568..56431683186166.0381184-UTR-P-wetherbeei_contig192:5568..5643Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig192 5569..5643 -
1683186166.098974-UTR-P-wetherbeei_contig192:7510..76881683186166.098974-UTR-P-wetherbeei_contig192:7510..7688Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig192 7511..7688 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186166.0478175-CDS-P-wetherbeei_contig192:5643..60691683186166.0478175-CDS-P-wetherbeei_contig192:5643..6069Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig192 5644..6069 -
1683186166.0646486-CDS-P-wetherbeei_contig192:6303..64801683186166.0646486-CDS-P-wetherbeei_contig192:6303..6480Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig192 6304..6480 -
1683186166.079734-CDS-P-wetherbeei_contig192:6630..68741683186166.079734-CDS-P-wetherbeei_contig192:6630..6874Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig192 6631..6874 -
1683186166.0895762-CDS-P-wetherbeei_contig192:7046..75101683186166.0895762-CDS-P-wetherbeei_contig192:7046..7510Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig192 7047..7510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig192.4.1

>prot_P-wetherbeei_contig192.4.1 ID=prot_P-wetherbeei_contig192.4.1|Name=mRNA_P-wetherbeei_contig192.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=437bp
MATAGVAVEIDDEAWYSAMVEAGSSCEPPGEQHKRPKSEINDETWAEAMM
AASASSAVRDLEDGAAWEDAARSLIGLARMGGDVAAAGNTVASFFKVEGG
AATLLVARWLRQNRPHSEPWMYRLERRQANDPTEFFVDSLADPTAIVTLR
LQDGSRLQTLSVFSLSSAAAAALLGAVAVPNVSAVLEHVDAAIHEETLDK
VLQRATGLSQRWADHCGFYALRGGRLPEGNYDALMVHEVLGDHVTFGPLT
ADDAPIVNDHWRFKKSGSLEMTEAMIARGPTVGARVDGQLASWCLVYHDL
NALGMLFTRKEWRGRGLAKAVVIRLLRECGCVLTGGSSNFARAAGAARAA
LAAAAGSPAAVAASAAMDADASPAPPPASAASTPSDIPYALMADPNITSI
SLFKQLGFQWVSASNWMGYAAAVPAPGPPVFPPLQD*
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mRNA from alignment at P-wetherbeei_contig192:5569..7688-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig192.4.1 ID=mRNA_P-wetherbeei_contig192.4.1|Name=mRNA_P-wetherbeei_contig192.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2120bp|location=Sequence derived from alignment at P-wetherbeei_contig192:5569..7688- (Phaeothamnion wetherbeei SAG_119_79)
CTCGGCGGACGAAAGATTTTTTGGCTATCCGTTCCTTCGTTTCACTTTCA
GGAAGGCCTCCGCATAAAGCACAATCCGTTGGCTCAGAAGCACCGACGTG
GCCCCTCTCTGCGCCAGAGACGCGATAGCGTCAGCCCTCTCAAAACGGGA
GATAAGAGGCTCGTTAGCGCAGAGGGCAATGGCTACTGCAGGCGTTGCTG
TAGAGATTGACGATGAGGCGTGGTACAGTGCCATGGTGGAAGCCGGGTCG
TCGTGCGAACCGCCAGGAGAACAGCATAAGAGGCCAAAGAGTGAAATCAA
CGACGAGACCTGGGCGGAGGCGATGATGGCGGCAAGCGCTTCTTCCGCCG
TCCGGGATCTTGAAGACGGGGCGGCGTGGGAAGATGCGGCGCGGTCTTTG
ATAGGTTTGGCTCGCATGGGAGGCGATGTCGCGGCAGCAGGCAATACCGT
GGCTAGCTTCTTTAAAGTGGAGGGCGGAGCCGCGACGTTGCTCGTGGCGC
GATGGCTGCGACAGAACAGGCCGCATAGCGAGCCGTGGATGTACCGGCTC
GAACGACGGCAGGCAAACGATCCGACCGAATTCTTCGTCGACTCGTTGGC
AGACCCAACAGCGATCGTTACGCTCAGGCTACAGGACGGAAGGTACGCTA
TCTGGCGCGCTTGTCCAATCGGATGCGCATGAATAGCTGCTGTTCTGCAG
CAGGGGAAATGCTGACAGAATCCATTCTCACTGATTTTCACCAATCATGT
TTACTCGCTCAGCTTTTGCCGTCTTTCCTTGTCCTTTCCTTTCCGCCTGG
TCTGGCCGGCCCAGCCGCCTGCAGACGCTGTCGGTCTTCAGCCTCAGCTC
CGCCGCGGCCGCCGCGCTGCTTGGGGCCGTCGCCGTGCCCAATGTGTCCG
CAGTCCTCGAACATGTCGATGCCGCCATCCACGAGGAGACCCTGGACAAG
GTGCTGCAGCGGGCGACGGGCCTCTCGCAGCGCTGGGCCGACCACTGCGG
ATTCTACGCACTGCGCGGCGGCCGCCTGCCCGAGGGAAACTATGATGCCC
TGATGGTGGTGAGTTTCGGCGAACAATCGGGGTGGTTAAAGATCGAGAAC
GTGATGACAGCCCCTTTTGGTTTTGTCTTCGATCCTCTTGTCTATCAAAT
GGATTCCAATGCAAGAACTGGCTCTAATCGTTTTCCGTCTCTTTTCTATC
TATCGCAGCATGAGGTGCTCGGTGACCACGTCACATTCGGGCCGCTAACG
GCAGACGACGCCCCGATCGTCAACGACCACTGGCGGTTCAAGAAGTCCGG
CAGCCTCGAAATGACGGAGGCCATGATCGCCCGCGGCCCCACCGTCGGCG
CCCGCGTGGACGGCCAGCTTGCTTCGTGGTGTCTGGTGAGTCGCCATCGG
GCTGTACTGCCATCGTATTCGGTCGGCTCGCCTGGAATGTTTTGGTGGTT
CAACGCCTCATTGTCGGCCTTCTTTGGTTCCGGTGAAGTTTTGATAGTTC
CAGGTCAGTGGCCAAGCTTCTTCCCCCGTCACCCTTTCCGTCACATGCCT
TGCTTTCTCATTATTTCTTGCGTCATTCGGAAACATTCCGCCGGCCGCGT
TCTTGCCATTCTTCGACAGGTCTACCACGATCTCAACGCTTTGGGCATGC
TTTTTACGCGGAAGGAGTGGCGCGGGCGGGGCCTCGCTAAGGCCGTTGTC
ATCAGGCTCCTGAGGGAGTGCGGTTGCGTTTTAACTGGTGGATCCAGCAA
CTTTGCGCGGGCGGCGGGGGCGGCGCGCGCGGCGTTGGCGGCGGCGGCGG
GGTCACCAGCGGCTGTTGCAGCATCAGCTGCGATGGATGCCGATGCATCA
CCAGCGCCTCCACCAGCTTCGGCGGCGTCGACTCCATCGGACATTCCTTA
CGCGCTTATGGCTGATCCAAACATCACGTCCATTTCCCTCTTCAAACAGC
TCGGGTTCCAGTGGGTTTCGGCAAGCAACTGGATGGGTTACGCGGCAGCG
GTGCCGGCGCCAGGCCCCCCAGTGTTTCCGCCGCTGCAGGACTGAAAACT
TGTGACGGATTGACGGCTGTACAGCATAGCATAGACGAGGTTACAAGTTT
AACAGAATCACGCGAAGAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig192:5569..7688-

>mRNA_P-wetherbeei_contig192.4.1 ID=mRNA_P-wetherbeei_contig192.4.1|Name=mRNA_P-wetherbeei_contig192.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1311bp|location=Sequence derived from alignment at P-wetherbeei_contig192:5569..7688- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTACTGCAGGCGTTGCTGTAGAGATTGACGATGAGGCGTGGTACAG
TGCCATGGTGGAAGCCGGGTCGTCGTGCGAACCGCCAGGAGAACAGCATA
AGAGGCCAAAGAGTGAAATCAACGACGAGACCTGGGCGGAGGCGATGATG
GCGGCAAGCGCTTCTTCCGCCGTCCGGGATCTTGAAGACGGGGCGGCGTG
GGAAGATGCGGCGCGGTCTTTGATAGGTTTGGCTCGCATGGGAGGCGATG
TCGCGGCAGCAGGCAATACCGTGGCTAGCTTCTTTAAAGTGGAGGGCGGA
GCCGCGACGTTGCTCGTGGCGCGATGGCTGCGACAGAACAGGCCGCATAG
CGAGCCGTGGATGTACCGGCTCGAACGACGGCAGGCAAACGATCCGACCG
AATTCTTCGTCGACTCGTTGGCAGACCCAACAGCGATCGTTACGCTCAGG
CTACAGGACGGAAGCCGCCTGCAGACGCTGTCGGTCTTCAGCCTCAGCTC
CGCCGCGGCCGCCGCGCTGCTTGGGGCCGTCGCCGTGCCCAATGTGTCCG
CAGTCCTCGAACATGTCGATGCCGCCATCCACGAGGAGACCCTGGACAAG
GTGCTGCAGCGGGCGACGGGCCTCTCGCAGCGCTGGGCCGACCACTGCGG
ATTCTACGCACTGCGCGGCGGCCGCCTGCCCGAGGGAAACTATGATGCCC
TGATGGTGCATGAGGTGCTCGGTGACCACGTCACATTCGGGCCGCTAACG
GCAGACGACGCCCCGATCGTCAACGACCACTGGCGGTTCAAGAAGTCCGG
CAGCCTCGAAATGACGGAGGCCATGATCGCCCGCGGCCCCACCGTCGGCG
CCCGCGTGGACGGCCAGCTTGCTTCGTGGTGTCTGGTCTACCACGATCTC
AACGCTTTGGGCATGCTTTTTACGCGGAAGGAGTGGCGCGGGCGGGGCCT
CGCTAAGGCCGTTGTCATCAGGCTCCTGAGGGAGTGCGGTTGCGTTTTAA
CTGGTGGATCCAGCAACTTTGCGCGGGCGGCGGGGGCGGCGCGCGCGGCG
TTGGCGGCGGCGGCGGGGTCACCAGCGGCTGTTGCAGCATCAGCTGCGAT
GGATGCCGATGCATCACCAGCGCCTCCACCAGCTTCGGCGGCGTCGACTC
CATCGGACATTCCTTACGCGCTTATGGCTGATCCAAACATCACGTCCATT
TCCCTCTTCAAACAGCTCGGGTTCCAGTGGGTTTCGGCAAGCAACTGGAT
GGGTTACGCGGCAGCGGTGCCGGCGCCAGGCCCCCCAGTGTTTCCGCCGC
TGCAGGACTGA
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