mRNA_P-wetherbeei_contig19189.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19189.1.1
Unique NamemRNA_P-wetherbeei_contig19189.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19189.1.1 vs. uniprot
Match: A0A832DJV7_9BACT (FAD-binding protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A832DJV7_9BACT)

HSP 1 Score: 369 bits (946), Expect = 8.520e-122
Identity = 183/291 (62.89%), Postives = 216/291 (74.23%), Query Frame = 1
Query:   52 LEFVADVLVLGGGPAGAWAALTARRTGAEVILADKGYFGTSGATAPSNTETWCVPPGAAREAAVARQRIKTGGLSDDAHVDRVLDSAWQGLHAMVAWRHPFAIDESGRPYLGNLRGPDYMRFLRRRVVAAGVRVLDHHPALALLGSADGVGGAIGMDRQRGNEWQVRSSAVVLATGGCAFGERFIGATGLTGDGYLMAVEAGAELSGMELSSQYAVAPAGSSMNKGMPFRFARFYDAAGRNLGAPGEDRQEFVAHALKSGPVYACLDKADETVAAWLRQGQPNCFLPFDRS 924
            LE  ADVLV+GGGPAGAWAA+ A   GA V+L DKGY GTSGATAPSNT TW VPPG  R AA+ ++  +TGGL+D   +DR+LD+AW  LH + AW +PF ID  G+PYL NLRGPDYM F+RRRV+AAGV VLDHHPAL LLG  D V GA+G+DRQR   W+VR+ AVVLATGGCAFGER +GA   TGDGYLMA EAGA +SGME S+QYA  P  S++NKG+PFR+A F    G  +   G DR   VA AL  GPV+A  D+A   V AWLR+GQPNCFLP +R+
Sbjct:   22 LELSADVLVVGGGPAGAWAAVAAADAGARVVLVDKGYLGTSGATAPSNTGTWFVPPGEGRRAAIEQRGRRTGGLTDPRWIDRMLDTAWDTLHRLAAWGYPFPIDAEGKPYLANLRGPDYMHFMRRRVLAAGVTVLDHHPALELLGDGDAVAGAVGLDRQRNRPWRVRAGAVVLATGGCAFGERILGAATSTGDGYLMAAEAGAVMSGMEFSAQYAFTPKPSALNKGLPFRWATFTRHDGAPISTAGRDRHTAVAEALLEGPVFAQYDRAAPEVQAWLRRGQPNCFLPHERN 312          
BLAST of mRNA_P-wetherbeei_contig19189.1.1 vs. uniprot
Match: A0A7Y9LNT9_9BURK (Succinate dehydrogenase/fumarate reductase flavoprotein subunit n=1 Tax=Pigmentiphaga litoralis TaxID=516702 RepID=A0A7Y9LNT9_9BURK)

HSP 1 Score: 365 bits (938), Expect = 8.210e-121
Identity = 183/292 (62.67%), Postives = 218/292 (74.66%), Query Frame = 1
Query:   46 ERLEFVADVLVLGGGPAGAWAALTARRTGAEVILADKGYFGTSGATAPSNTETWCVPPGAAREAAVARQRIKTGGLSDDAHVDRVLDSAWQGLHAMVAWRHPFAIDESGRPYLGNLRGPDYMRFLRRRVVAAGVRVLDHHPALALLGSADGVGGAIGMDRQRGNEWQVRSSAVVLATGGCAFGERFIGATGLTGDGYLMAVEAGAELSGMELSSQYAVAPAGSSMNKGMPFRFARFYDAAGRNLGAPGEDRQEFVAHALKSGPVYACLDKADETVAAWLRQGQPNCFLPFDR 921
            E L    DVLV+GGGPAGAWAA TA   G +V+L DKGYFGTSGATAPSNT  WCVPPG  R AA AR+  + GGL+D A  +RVL +A+ GL  +    +PF  DESG+PY+ NLRGPD+MRF+RR V AAGV VLDHHPAL+LL    G+ GA G+ RQ+G  W++ + AVVLATGGCA+GER +GATGLTGDGYLMA EAGA LSGME  SQY +APAG+S+NKG+ +R+A F D+ GR L     DR   VA AL  GPVYACLD AD+TV  WLR+ QPNCF+PFD+
Sbjct:    7 EPLALNTDVLVIGGGPAGAWAAWTAAAAGRKVVLVDKGYFGTSGATAPSNTGRWCVPPGPGRGAAAARRAARAGGLADPAEGERVLGAAYDGLLWLAEQGYPFPRDESGQPYIANLRGPDFMRFMRREVKAAGVTVLDHHPALSLLADGQGIAGARGLARQQGRAWRITAGAVVLATGGCAYGERMLGATGLTGDGYLMAAEAGATLSGMEFCSQYGIAPAGTSLNKGLIYRWATFTDSDGRALDPTPSDRHAQVARALLDGPVYACLDLADDTVQGWLRRAQPNCFVPFDK 298          
BLAST of mRNA_P-wetherbeei_contig19189.1.1 vs. uniprot
Match: A0A858X3G1_9HYPH (FAD-binding protein n=1 Tax=Starkeya sp. ORNL1 TaxID=2709380 RepID=A0A858X3G1_9HYPH)

HSP 1 Score: 364 bits (935), Expect = 4.000e-120
Identity = 184/290 (63.45%), Postives = 217/290 (74.83%), Query Frame = 1
Query:   52 LEFVADVLVLGGGPAGAWAALTARRTGAEVILADKGYFGTSGATAPSNTETWCVPPGAAREAAVARQRIKTGGLSDDAHVDRVLDSAWQGLHAMVAWRHPFAIDESGRPYLGNLRGPDYMRFLRRRVVAAGVRVLDHHPALALLGSADGVGGAIGMDRQRGNEWQVRSSAVVLATGGCAFGERFIGATGLTGDGYLMAVEAGAELSGMELSSQYAVAPAGSSMNKGMPFRFARFYDAAGRNLGAPGEDRQEFVAHALKSGPVYACLDKADETVAAWLRQGQPNCFLPFDR 921
            LE   +VLVLGGGPAGAWAA++A   G  V+L DKGYFGTSGATAPSNT TWC+PPG AR  AV R+  +T GLSD     RVLD+A + L  + A  +PF  DE G  Y+ NLRGPDYMRF+RRR +  GV VLDHHPAL L+G +DG+GGA G DRQ G  WQ+R+ AVV+ TGGCAFGER +GATGLTGDGYLMA EAGA LSGME S+QY VAPA SS+NKG+ +R+A F+DA G  +   G DR   VA AL +GPV+A LDKA+  +  WLR+GQPNCFLPFDR
Sbjct:   17 LELDTEVLVLGGGPAGAWAAVSAAELGRRVVLVDKGYFGTSGATAPSNTGTWCLPPGEARRTAVERRAARTFGLSDQRQTLRVLDTAHETLRQLGAAGYPFPHDERGELYIANLRGPDYMRFMRRRALTLGVTVLDHHPALELIGDSDGIGGAAGWDRQNGRAWQIRAGAVVIGTGGCAFGERMLGATGLTGDGYLMAAEAGASLSGMEFSNQYGVAPAHSSLNKGLIYRWASFFDADGHGIDT-GADRHLAVAQALLNGPVFASLDKAEPQIQDWLRRGQPNCFLPFDR 305          
BLAST of mRNA_P-wetherbeei_contig19189.1.1 vs. uniprot
Match: A0A7X1P8E4_9PROT (FAD-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1P8E4_9PROT)

HSP 1 Score: 358 bits (919), Expect = 6.810e-118
Identity = 185/294 (62.93%), Postives = 217/294 (73.81%), Query Frame = 1
Query:   43 AERLEFVADVLVLGGGPAGAWAALTARRTGAEVILADKGYFGTSGATAPSNTETWCVPPGAAREAAVARQRIKTGGLSDDAHVDRVLDSAWQGLHAMVAWRHPFAIDESGRPYLGNLRGPDYMRFLRRRVVAAGVRVLDHHPALALLGSADGVGGAIGMDRQRGNEWQVRSSAVVLATGGCAFGERFIGATGLTGDGYLMAVEAGAELSGMELSSQYAVAPAGSSMNKGMPFRFARFYDAAGRNLGAPGEDRQEFVAHALKSGPVYACLDKADETVAAWLRQGQPNCFLPFDRS 924
            AE LE  ADVLV+GGGPA +WAAL A   GA V++ DKGY GTSGATAP+NT TW VPPGA REAAVAR+++  G L+    VDR LD AWQ LH +  W + F  D+SG+PYL NLRGPDYM F+RRR+V AGV +LDHHPAL LL  +  + GA G+DRQR   W+VR+ AVVLATGGCAFGER +GATGLTGDGYLMAVEAGA LSGME S+QYA AP  SS+NKGMPF +A F+   G  L    +DR   VA AL  GPV+A LD+    +  WLRQ QPNCFLP+DR+
Sbjct:    8 AEVLELAADVLVIGGGPAASWAALAAAEAGARVVVVDKGYLGTSGATAPTNTGTWFVPPGAEREAAVARRQLLNGELAVPRWVDRTLDMAWQRLHTLADWGYKFPNDDSGKPYLTNLRGPDYMAFMRRRLVRAGVAILDHHPALELLVDSSVIAGAAGIDRQRNRPWRVRAGAVVLATGGCAFGERMLGATGLTGDGYLMAVEAGAALSGMEFSAQYACAPIQSSINKGMPFVWASFFREDGSRLDT-SKDRYVVVARALLEGPVWAQLDRGIPELRLWLRQAQPNCFLPYDRN 300          
BLAST of mRNA_P-wetherbeei_contig19189.1.1 vs. uniprot
Match: A0A1V2BQ72_RAOTE (FAD_binding_2 domain-containing protein n=4 Tax=Raoultella TaxID=160674 RepID=A0A1V2BQ72_RAOTE)

HSP 1 Score: 352 bits (904), Expect = 1.530e-115
Identity = 183/292 (62.67%), Postives = 219/292 (75.00%), Query Frame = 1
Query:   46 ERLEFVADVLVLGGGPAGAWAALTARRTGAEVILADKGYFGTSGATAPSNTETWCVPPGAAREAAVARQRIKTGGLSDDAHVDRVLDSAWQGLHAMVAWRHPFAIDESGRPYLGNLRGPDYMRFLRRRVVAAGVRVLDHHPALALLGSADGVGGAIGMDRQRGNEWQVRSSAVVLATGGCAFGERFIGATGLTGDGYLMAVEAGAELSGMELSSQYAVAPAGSSMNKGMPFRFARFYDAAGRNLGAPGEDRQEFVAHALKSGPVYACLDKADETVAAWLRQGQPNCFLPFDR 921
            E +E  ADVLV+GGGPAGAWAAL A R+G  VILADKGYFGTSGATAPSNT TWCVPPG  RE  +AR+R  TG L+    + R L   W+GL  ++AW +PF  D  G PYL NLRGPDYMRF+R +V  AGV ++DH PALALL  ADGV GA+G++RQ+   W+V +S+VVLATGGCAFGER +GATGLTGDGY+M +EAGA LSGME S+QY + P  +SMNKG+ +++A FYD  G  L   G DRQ  +A AL SGPVYA LD+AD  + A LRQ QPNCF+PFDR
Sbjct:    7 EIVEESADVLVVGGGPAGAWAALIAARSGCRVILADKGYFGTSGATAPSNTGTWCVPPGQ-REDEIARRRQLTGELAAPEVMQRTLAGCWEGLQQLLAWGYPFPQDHDGSPYLANLRGPDYMRFMRHKVREAGVTIMDHSPALALLKDADGVAGAVGLNRQKNFFWRVTASSVVLATGGCAFGERILGATGLTGDGYVMGMEAGAALSGMEYSAQYGITPIHTSMNKGVIYQWATFYDENGHVLAIEG-DRQTALARALLSGPVYARLDRADPPLQACLRQSQPNCFVPFDR 296          
BLAST of mRNA_P-wetherbeei_contig19189.1.1 vs. uniprot
Match: A0A443IF81_9GAMM (Uncharacterized protein n=1 Tax=[Pantoea] beijingensis TaxID=1324864 RepID=A0A443IF81_9GAMM)

HSP 1 Score: 349 bits (896), Expect = 2.610e-114
Identity = 177/296 (59.80%), Postives = 218/296 (73.65%), Query Frame = 1
Query:   34 PQFAERLEFVADVLVLGGGPAGAWAALTARRTGAEVILADKGYFGTSGATAPSNTETWCVPPGAAREAAVARQRIKTGGLSDDAHVDRVLDSAWQGLHAMVAWRHPFAIDESGRPYLGNLRGPDYMRFLRRRVVAAGVRVLDHHPALALLGSADGVGGAIGMDRQRGNEWQVRSSAVVLATGGCAFGERFIGATGLTGDGYLMAVEAGAELSGMELSSQYAVAPAGSSMNKGMPFRFARFYDAAGRNLGAPGEDRQEFVAHALKSGPVYACLDKADETVAAWLRQGQPNCFLPFDR 921
            P  A+  E + DVLV+GGGPAGAWAAL A   G  VIL DKGYFGTSGATAPSNT TWCV P   R+A + R+   TG L++   ++R LDSAW GLH +V W +PF  D  GRPY+ NLRGPDYMRF+RR+  AAGV + DH PALAL+  A+GV GA+G+ RQ+   W++ +SAV+LATGGCAFGERF+GATGLTGDGYL+  +AGA LSGME S+QY + P  +SMNKG+ +++A FYDA    L  PG DRQ  +A A+  GPVYA LD+AD  + + LRQ QPNCF+PFDR
Sbjct:    4 PALADINEEMTDVLVIGGGPAGAWAALRAATAGRRVILVDKGYFGTSGATAPSNTGTWCVAP-EQRDAEITRRMKLTGALANPETIERTLDSAWHGLHELVRWGYPFPKDGQGRPYIANLRGPDYMRFMRRKARAAGVIIYDHSPALALMQDAEGVAGAVGIHRQKNRFWRITASAVILATGGCAFGERFLGATGLTGDGYLLGAQAGARLSGMEYSAQYGITPVSTSMNKGIIYQWATFYDADENVLLLPG-DRQSALAKAMLRGPVYARLDRADTELQSSLRQSQPNCFVPFDR 297          
BLAST of mRNA_P-wetherbeei_contig19189.1.1 vs. uniprot
Match: A0A434D1J5_9HYPH (FAD-binding protein (Fragment) n=1 Tax=Mesorhizobium sp. M6A.T.Ca.TU.002.02.2.1 TaxID=2496789 RepID=A0A434D1J5_9HYPH)

HSP 1 Score: 344 bits (883), Expect = 7.250e-114
Identity = 183/315 (58.10%), Postives = 224/315 (71.11%), Query Frame = 1
Query:    4 TASKVRTAAKPQFAERLEFVADVLVLGGGPAGAWAALTARRTGAEVILADKGYFGTSGATAPSNTETWCVPPGAAREAAVARQRIKTGGLSDDAHVDRVLDSAWQGLHAMVAWRHPFAIDESGRPYLGNLRGPDYMRFLRRRVVAAGVRVLDHHPALALLGSADGVGGAIGMDRQRGNEWQVRSSAVVLATGGCAFGERFIGATGLTGDGYLMAVEAGAELSGMELSSQYAVAPAGSSMNKGMPFRFARFYDAAGRN-LGAPGE-------DRQEFVAHALKSGPVYACLDKADETVAAWLRQGQPNCFLPFDRS 924
            TA  VR+A      ERL   ADVLVLGGGP+ AWAA+ A   GA V+LADKGY GTSGATAPSNT TWCVPPG  R A V R+  +TG L+D   + R +D+A++ L  +  W +PF  ++ GR Y+ NLRGPDYMRF+RRRV+ AGV VLDHHPAL LL   D + GA G+ RQ   +W+V + AVVLATGGCAF ER +G+TGLTGDGYLMA EAGA LSGME + +Y +AP GSS+NKG+PFR+A F+   G   LG  GE       DR+E VA AL  GP+YA LD+A+  +  WLRQGQPNCF+P+DR+
Sbjct:    4 TARAVRSAP-----ERLHLAADVLVLGGGPSAAWAAVAAAENGATVVLADKGYLGTSGATAPSNTGTWCVPPGDNRHAVVERRWQRTGELADQRWMLRCVDTAYRNLLQLSEWGYPFPSEDDGRLYIANLRGPDYMRFMRRRVLLAGVTVLDHHPALELLSDGDAIVGAAGVGRQVERDWRVDARAVVLATGGCAFRERILGSTGLTGDGYLMAAEAGASLSGMEFTGKYTLAPHGSSLNKGLPFRWASFHREDGSPILGPTGEPLRNGIGDREEEVARALIEGPLYARLDQAEPALQGWLRQGQPNCFVPYDRA 313          
BLAST of mRNA_P-wetherbeei_contig19189.1.1 vs. uniprot
Match: A0A434IFH7_9HYPH (FAD-binding protein (Fragment) n=27 Tax=Hyphomicrobiales TaxID=356 RepID=A0A434IFH7_9HYPH)

HSP 1 Score: 347 bits (890), Expect = 1.160e-113
Identity = 182/308 (59.09%), Postives = 226/308 (73.38%), Query Frame = 1
Query:   31 KPQ--FAERLEFVADVLVLGGGPAGAWAALTARRTGAEVILADKGYFGTSGATAPSNTETWCVPPGAAREAAVARQRIKTGGLSDDAHVDRVLDSAWQGLHAMVAWRHPFAIDESGRPYLGNLRGPDYMRFLRRRVVAAGVRVLDHHPALALLGSADGVGGAIGMDRQRGNEWQVRSSAVVLATGGCAFGERFIGATGLTGDGYLMAVEAGAELSGMELSSQYAVAPAGSSMNKGMPFRFARFYDAAGRN-LGAPGE-------DRQEFVAHALKSGPVYACLDKADETVAAWLRQGQPNCFLPFDRS 924
            KPQ   ++RL   ADVLVLGGGP+ AWAA+ A  +GA+V+LADKGY GTSGATAPSNT TWCVPPG  R A V R+  +TG L+D   + R +D+A++ L  +  W +PF  ++ GR Y+ NLRGPDYMRF+RRRV+ AGV VLDHHPAL LL   + + GA G+ RQ G +W+V ++AVVLATGGCAF ER +GATGLTGDGYLMA EAGA LSGME + +Y +AP GSS+NKG+PFR+A F+   G   LG  GE       DR+E VA AL  GPVYA LD+A+  +  WLRQGQPNCF+P+DR+
Sbjct:    3 KPQKSVSDRLHLQADVLVLGGGPSAAWAAVAAAESGAKVVLADKGYLGTSGATAPSNTGTWCVPPGDNRHAVVERRWQRTGELADPRWMLRCVDTAYRNLLRLSEWGYPFPSEDDGRLYIANLRGPDYMRFMRRRVLLAGVTVLDHHPALELLSDGNAIVGAAGVARQIGQDWRVDANAVVLATGGCAFRERILGATGLTGDGYLMAAEAGASLSGMEFTGKYTLAPYGSSLNKGLPFRWASFHREDGSPILGPTGEPLRNGIGDREEEVARALIDGPVYARLDQAEPALQGWLRQGQPNCFVPYDRA 310          
BLAST of mRNA_P-wetherbeei_contig19189.1.1 vs. uniprot
Match: UPI001E45D967 (FAD-binding protein n=2 Tax=Ancylobacter TaxID=99 RepID=UPI001E45D967)

HSP 1 Score: 345 bits (884), Expect = 1.780e-112
Identity = 179/290 (61.72%), Postives = 207/290 (71.38%), Query Frame = 1
Query:   52 LEFVADVLVLGGGPAGAWAALTARRTGAEVILADKGYFGTSGATAPSNTETWCVPPGAAREAAVARQRIKTGGLSDDAHVDRVLDSAWQGLHAMVAWRHPFAIDESGRPYLGNLRGPDYMRFLRRRVVAAGVRVLDHHPALALLGSADGVGGAIGMDRQRGNEWQVRSSAVVLATGGCAFGERFIGATGLTGDGYLMAVEAGAELSGMELSSQYAVAPAGSSMNKGMPFRFARFYDAAGRNLGAPGEDRQEFVAHALKSGPVYACLDKADETVAAWLRQGQPNCFLPFDR 921
            L   ADVLVLGGGPAGAWAA+TA   G  V+LADKGYFGTSGATAPSNT TWCVPPG AR A V R+  +  GL+D   + R+LD+A + L  +    +PF     G  Y+ NLRGPDYMR +RR  +  GV VLDHHPAL LLG+ D + GA G DRQ+   WQV + AVVLATGGCAFGER +GATGLTGDGYLMA EAGA LSGME   QY VAPAGSS+NKG+P+R+A F+D  G+ L     DR   VA  L  GPV+A LDKA   +  WLR+GQPNCFLPFDR
Sbjct:   17 LTLEADVLVLGGGPAGAWAAVTAAENGRRVVLADKGYFGTSGATAPSNTGTWCVPPGEARAAQVERRAARAFGLADPHVMLRMLDTAHEALRMLGNDGYPFPRQSDGELYIANLRGPDYMRHMRRLALKRGVIVLDHHPALELLGADDAIVGAAGWDRQQNRPWQVTAGAVVLATGGCAFGERMLGATGLTGDGYLMAAEAGASLSGMEFCGQYGVAPAGSSLNKGLPYRWASFFDVDGKPLDMSAGDRHVAVAKGLLRGPVFARLDKAGPEIQDWLRRGQPNCFLPFDR 306          
BLAST of mRNA_P-wetherbeei_contig19189.1.1 vs. uniprot
Match: L0KNG3_MESAW (Succinate dehydrogenase/fumarate reductase flavoprotein subunit n=39 Tax=Bacteria TaxID=2 RepID=L0KNG3_MESAW)

HSP 1 Score: 344 bits (882), Expect = 3.550e-112
Identity = 176/301 (58.47%), Postives = 221/301 (73.42%), Query Frame = 1
Query:   46 ERLEFVADVLVLGGGPAGAWAALTARRTGAEVILADKGYFGTSGATAPSNTETWCVPPGAAREAAVARQRIKTGGLSDDAHVDRVLDSAWQGLHAMVAWRHPFAIDESGRPYLGNLRGPDYMRFLRRRVVAAGVRVLDHHPALALLGSADGVGGAIGMDRQRGNEWQVRSSAVVLATGGCAFGERFIGATGLTGDGYLMAVEAGAELSGMELSSQYAVAPAGSSMNKGMPFRFARFYDAAGRN-LGAPGE-------DRQEFVAHALKSGPVYACLDKADETVAAWLRQGQPNCFLPFDRS 924
            + L+   DVLVLGGGP+ AWAA+ A  +GA+V+LADKGY GTSGATAPSNT TWCVPPG  R A V R+  +TG L+D   + R +D+A++ L  +  W +PF  ++ GR Y+ NLRGPDYMRF+RRRV+ AGV VLDHHPAL LL   D + GA G+ RQ G++W+V + AVVLATGGCAF ER +G TGLTGDGYLMA EAGA LSGME + +Y +AP GSS+NKG+PFR+A F+   G   LG+ GE       DR+E VA AL  GPV+A LD+A+  +  WLRQGQPNCF+P+DR+
Sbjct:   10 DALQLQVDVLVLGGGPSAAWAAVAAAESGAKVVLADKGYLGTSGATAPSNTGTWCVPPGDNRHAVVERRWQRTGELADQRWMLRCVDTAYRNLLRLSEWGYPFPSEDDGRLYIANLRGPDYMRFMRRRVLLAGVTVLDHHPALELLSDGDAIVGAAGVARQAGHDWRVEAGAVVLATGGCAFRERILGGTGLTGDGYLMAAEAGARLSGMEFTGKYTLAPYGSSLNKGLPFRWASFHREDGSPILGSTGEPLRNGIGDREEEVARALIDGPVHARLDQAEPALQGWLRQGQPNCFVPYDRA 310          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19189.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A832DJV7_9BACT8.520e-12262.89FAD-binding protein n=1 Tax=Candidatus Rokubacteri... [more]
A0A7Y9LNT9_9BURK8.210e-12162.67Succinate dehydrogenase/fumarate reductase flavopr... [more]
A0A858X3G1_9HYPH4.000e-12063.45FAD-binding protein n=1 Tax=Starkeya sp. ORNL1 Tax... [more]
A0A7X1P8E4_9PROT6.810e-11862.93FAD-binding protein n=1 Tax=Betaproteobacteria bac... [more]
A0A1V2BQ72_RAOTE1.530e-11562.67FAD_binding_2 domain-containing protein n=4 Tax=Ra... [more]
A0A443IF81_9GAMM2.610e-11459.80Uncharacterized protein n=1 Tax=[Pantoea] beijinge... [more]
A0A434D1J5_9HYPH7.250e-11458.10FAD-binding protein (Fragment) n=1 Tax=Mesorhizobi... [more]
A0A434IFH7_9HYPH1.160e-11359.09FAD-binding protein (Fragment) n=27 Tax=Hyphomicro... [more]
UPI001E45D9671.780e-11261.72FAD-binding protein n=2 Tax=Ancylobacter TaxID=99 ... [more]
L0KNG3_MESAW3.550e-11258.47Succinate dehydrogenase/fumarate reductase flavopr... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19189contigP-wetherbeei_contig19189:1..924 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1298858.AUEL01000011_gene5420
Preferred nameasfA
PFAMsFAD_binding_2,Succ_DH_flav_C
Model size924
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.46e-113
EggNOG OGsCOG1053@1|root,COG1053@2|Bacteria,1NZBR@1224|Proteobacteria,2TSN4@28211|Alphaproteobacteria
Descriptionsuccinate dehydrogenase fumarate reductase, flavoprotein subunit
Cds size924
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186165.754146-CDS-P-wetherbeei_contig19189:0..9241683186165.754146-CDS-P-wetherbeei_contig19189:0..924Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19189 1..924 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19189.1.1prot_P-wetherbeei_contig19189.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19189 1..924 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19189.1.1

>prot_P-wetherbeei_contig19189.1.1 ID=prot_P-wetherbeei_contig19189.1.1|Name=mRNA_P-wetherbeei_contig19189.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=308bp
MTASKVRTAAKPQFAERLEFVADVLVLGGGPAGAWAALTARRTGAEVILA
DKGYFGTSGATAPSNTETWCVPPGAAREAAVARQRIKTGGLSDDAHVDRV
LDSAWQGLHAMVAWRHPFAIDESGRPYLGNLRGPDYMRFLRRRVVAAGVR
VLDHHPALALLGSADGVGGAIGMDRQRGNEWQVRSSAVVLATGGCAFGER
FIGATGLTGDGYLMAVEAGAELSGMELSSQYAVAPAGSSMNKGMPFRFAR
FYDAAGRNLGAPGEDRQEFVAHALKSGPVYACLDKADETVAAWLRQGQPN
CFLPFDRS
back to top

mRNA from alignment at P-wetherbeei_contig19189:1..924-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19189.1.1 ID=mRNA_P-wetherbeei_contig19189.1.1|Name=mRNA_P-wetherbeei_contig19189.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=924bp|location=Sequence derived from alignment at P-wetherbeei_contig19189:1..924- (Phaeothamnion wetherbeei SAG_119_79)
ATGACAGCCAGCAAGGTGCGCACCGCTGCCAAGCCCCAATTCGCCGAACG TCTGGAGTTCGTCGCCGACGTGCTGGTCCTTGGCGGCGGACCGGCCGGCG CCTGGGCGGCGCTGACCGCACGCCGCACCGGTGCCGAGGTGATCCTCGCC GACAAGGGCTATTTCGGAACCAGCGGCGCCACCGCCCCCTCCAACACCGA GACGTGGTGCGTTCCCCCGGGGGCGGCGCGGGAGGCAGCCGTAGCGCGCC AGCGCATCAAGACCGGCGGACTCAGCGACGACGCCCATGTCGATCGTGTC CTCGACAGCGCATGGCAAGGGCTTCACGCCATGGTCGCATGGCGCCATCC CTTCGCCATCGACGAGTCCGGCCGCCCCTACCTCGGCAATCTGCGCGGCC CCGACTACATGCGCTTCCTTCGCCGCAGGGTCGTTGCCGCCGGGGTGCGC GTTCTCGATCACCATCCCGCTCTCGCTCTGCTGGGGAGCGCCGACGGGGT TGGCGGCGCCATCGGGATGGACCGCCAGCGCGGCAACGAATGGCAGGTGC GATCCAGCGCCGTCGTGCTGGCGACGGGAGGTTGCGCCTTCGGCGAGCGC TTCATCGGTGCGACCGGACTGACCGGCGACGGCTATCTGATGGCCGTCGA GGCTGGTGCGGAACTCTCGGGGATGGAGTTGTCCTCCCAGTATGCCGTCG CTCCCGCCGGCAGTTCGATGAACAAGGGCATGCCGTTTCGCTTCGCGCGC TTCTACGACGCGGCCGGTCGCAACCTTGGCGCCCCCGGTGAGGACAGGCA GGAGTTCGTGGCGCACGCACTCAAATCCGGCCCGGTCTACGCGTGCCTCG ACAAGGCCGACGAGACGGTGGCCGCCTGGCTGCGGCAGGGCCAGCCCAAC TGTTTCCTTCCCTTCGATCGCAGC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig19189:1..924-

>mRNA_P-wetherbeei_contig19189.1.1 ID=mRNA_P-wetherbeei_contig19189.1.1|Name=mRNA_P-wetherbeei_contig19189.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=924bp|location=Sequence derived from alignment at P-wetherbeei_contig19189:1..924- (Phaeothamnion wetherbeei SAG_119_79)
ATGACAGCCAGCAAGGTGCGCACCGCTGCCAAGCCCCAATTCGCCGAACG
TCTGGAGTTCGTCGCCGACGTGCTGGTCCTTGGCGGCGGACCGGCCGGCG
CCTGGGCGGCGCTGACCGCACGCCGCACCGGTGCCGAGGTGATCCTCGCC
GACAAGGGCTATTTCGGAACCAGCGGCGCCACCGCCCCCTCCAACACCGA
GACGTGGTGCGTTCCCCCGGGGGCGGCGCGGGAGGCAGCCGTAGCGCGCC
AGCGCATCAAGACCGGCGGACTCAGCGACGACGCCCATGTCGATCGTGTC
CTCGACAGCGCATGGCAAGGGCTTCACGCCATGGTCGCATGGCGCCATCC
CTTCGCCATCGACGAGTCCGGCCGCCCCTACCTCGGCAATCTGCGCGGCC
CCGACTACATGCGCTTCCTTCGCCGCAGGGTCGTTGCCGCCGGGGTGCGC
GTTCTCGATCACCATCCCGCTCTCGCTCTGCTGGGGAGCGCCGACGGGGT
TGGCGGCGCCATCGGGATGGACCGCCAGCGCGGCAACGAATGGCAGGTGC
GATCCAGCGCCGTCGTGCTGGCGACGGGAGGTTGCGCCTTCGGCGAGCGC
TTCATCGGTGCGACCGGACTGACCGGCGACGGCTATCTGATGGCCGTCGA
GGCTGGTGCGGAACTCTCGGGGATGGAGTTGTCCTCCCAGTATGCCGTCG
CTCCCGCCGGCAGTTCGATGAACAAGGGCATGCCGTTTCGCTTCGCGCGC
TTCTACGACGCGGCCGGTCGCAACCTTGGCGCCCCCGGTGAGGACAGGCA
GGAGTTCGTGGCGCACGCACTCAAATCCGGCCCGGTCTACGCGTGCCTCG
ACAAGGCCGACGAGACGGTGGCCGCCTGGCTGCGGCAGGGCCAGCCCAAC
TGTTTCCTTCCCTTCGATCGCAGC
back to top