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Homology
BLAST of mRNA_P-wetherbeei_contig1916.2.2 vs. uniprot
Match: D7FPU9_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU9_ECTSI) HSP 1 Score: 64.3 bits (155), Expect = 1.340e-6 Identity = 48/134 (35.82%), Postives = 69/134 (51.49%), Query Frame = 1
Query: 1663 ADDEYEYPSSPGAAADRRNRGC--TAEERQQARRERNRIHAKRTRHRKRLYVEACEVLIKQLSIDNSRRREGLRAGCGGALSCGGFGGGGDNVPAVPRELCVPVPAVEDVTVLWEFTAGVEAGSTKRRRPGNGV 2058
A D+ E + G +RG T +R RRERNR+HAKRTR+RK+L+VEAC V+I ++ ++N++ +RA G DN RE P E + LW+F G ++K PG+GV
Sbjct: 213 AGDDEEAATHAGGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRAS--------GIQLPEDNWAEEVRETIPEEPLPEYLAALWDFAEGKSHSTSKA--PGSGV 336
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 35128.Thaps24189 |
| PFAMs | bZIP_2 |
| Model size | 4100 |
| Max annot lvl | 2836|Bacillariophyta |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Evalue | 1.66e-05 |
| EggNOG OGs | 2CYZ1@1|root,2S7C7@2759|Eukaryota,2XC3T@2836|Bacillariophyta |
| Ec32 ortholog description | Basic leucine zipper transcription factor |
| Ec32 ortholog | Ec-18_001760.1 |
| Description | Basic region leucine zipper |
| Cds size | 2319 |
| COG category | K |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1683186165.223687-UTR-P-wetherbeei_contig1916:1490..2152 | 1683186165.223687-UTR-P-wetherbeei_contig1916:1490..2152 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1916 1491..2152 - |
| 1683186165.2680051-UTR-P-wetherbeei_contig1916:5100..5122 | 1683186165.2680051-UTR-P-wetherbeei_contig1916:5100..5122 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1916 5101..5122 - |
| 1683186165.2767534-UTR-P-wetherbeei_contig1916:5342..6439 | 1683186165.2767534-UTR-P-wetherbeei_contig1916:5342..6439 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1916 5343..6439 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1683186165.235105-CDS-P-wetherbeei_contig1916:2152..3827 | 1683186165.235105-CDS-P-wetherbeei_contig1916:2152..3827 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1916 2153..3827 - |
| 1683186165.243253-CDS-P-wetherbeei_contig1916:4054..4685 | 1683186165.243253-CDS-P-wetherbeei_contig1916:4054..4685 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1916 4055..4685 - |
| 1683186165.2515268-CDS-P-wetherbeei_contig1916:5087..5100 | 1683186165.2515268-CDS-P-wetherbeei_contig1916:5087..5100 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1916 5088..5100 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1916.2.2 >prot_P-wetherbeei_contig1916.2.2 ID=prot_P-wetherbeei_contig1916.2.2|Name=mRNA_P-wetherbeei_contig1916.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=773bp
MVARDRTRISADFVGENASSSEEDEGWGGRGAFPRAAATSPMKAKSFKER NKEHARRTRQRRKQHLEDLRQRLSELRAEALVLRAAVEEQKTALALVAMS AGNVVDDVDVVPFDSKNEMARPPPALEGILEQFEALDTSVLPSTSAAAIA AAVSTASAGAAADRHGGRTGSDGDISGKGDGADDEYEYPSSPGAAADRRN RGCTAEERQQARRERNRIHAKRTRHRKRLYVEACEVLIKQLSIDNSRRRE GLRAGCGGALSCGGFGGGGDNVPAVPRELCVPVPAVEDVTVLWEFTAGVE AGSTKRRRPGNGVGPAVAAAAAVVAGGATAGAGAALSVIGSREGRPLKRR CSGSASVVGGDGSDLNVGGSSVNLGLVTDDGSLVCDGVVEGTGAPIPAVR RGSGSSAASAAMSAATEVSGAESVRNSPVFCGPDTVRGTASSRIGAAGVA RGVASPVRLPPSPPLPLPAVEGAAARCVQESPVPAIAPSAAAAAAGAAAA FAADAAAADAAIYWSAPVETFSVSSSFAAEYDGVYGQPITSIGTVTNSIA RYGYDGVYEHRGTVKPLPWMLAAPQRWERFFSPAPPLAAPALAPRTAAGG ACAAATRDMADVVAAEEGVWRAHLHLPLPPLPTALGMPPRPSPRLHPPQP QQQRRLPEPDPEPELAPEPPMALWARNGLQMEGLGFAWEGGGDGAGVRSG MGGVGGGFGCFGGSGRNGEGYSATAGFARASSGSRISGGGSAGAGCWSDP SALLEASKQWFNPWVKTSRPST* back to topmRNA from alignment at P-wetherbeei_contig1916:1491..6439- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1916.2.2 ID=mRNA_P-wetherbeei_contig1916.2.2|Name=mRNA_P-wetherbeei_contig1916.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4949bp|location=Sequence derived from alignment at P-wetherbeei_contig1916:1491..6439- (Phaeothamnion wetherbeei SAG_119_79) TTGGCGTCGGCGGGCGCCGGTCCACCCCATTCGCCCGCTTGGCGCGCGCG
GTCGGAATGAGACAGGCAAGTGGGCGGGCGGCGTTTGCGCGGCGCGGCTG
GCCTGGCGGGCTGGGCAAGGTGGCGTGCAATGCCGTGCTTGTCTACCTGC
TTGCTGCTCCTGCATGACTTCGGACCGCATCCTGCGGCAGCTGCGGCTAC
CGCATCCTGCGGCAGCTGCGGCTGCCGCTTCGGATGGCGAGGCGGGAAAC
GCGCTGGCTGGGCGCGGCGCGGCGCCAGCGTGTGGCGTTGTGGCTCATTG
CCGATGTAGCCGCTATTGCTTTGGCCACCATTTGCGCCGTTATTCTCGTG
GCGAGGGCGACTTTACGACTTTGAAAGAGCCGTCGGTTTGTGACGGGTTG
GGTGGTTTCTCCTACTAGTGTAGGGAATAGGTCCTTTCCCTTTTCAGTTA
TCCGCCCCAGTTACTAGTGTATTGACAAGAGGAATGGAATGAAGGAGGTG
GGAGAAGGTGCTTCGCCATGTTCGGCAGCCAGTTTTTACGGCTTTACAGA
AGTGGTTCCTCACAGGAAGGAGTGCACTGATCTTGGCATCAGTTTATGAA
TGCGAAGTCCCTCAAGTTCCTTGCTACTTCCTCCAAGGAAGGGCTGAGTC
CCTGGCTAGACGACTGTTGTTCGCCGGATTGCGTGCCCTTAAGCCATCCA
ATGGCCGCCGTACATGAATAGGCTTCCAACTTGTTGCACAACGCCAGATG
GACGCTGCTGTCAAAGGATCCCAATTGCGATTGCGTTTGCACTGCCTGTC
TCGAACAATCACATCCCTACCTAGTACGGCAGAAGGGTCGCAACTCCAAT
TAAGAGCCGACGTCTTTGAGGGAGCCCAACCACGCTTCAGTGCCTCCGCC
ACAGCCCGCTGCTGTGCCCGCTTACGAGTTGTGTAACCGATGCATTTGGT
GCCGTCGAGAAGAACACTGCTCGTCACTTTCGCGGAGGCAAAACATCGTC
CGTAGTAAAACCGCACTCATGGCTCCTCCACCTTCTCGTCGCTTCCATTC
CTACACGTGTCGGAATGAAGCAGAAAACGCTCGCGTTCGCTTTCTCTGTA
AGTCAAACTCGAGCCGAAAGATGGAAAGTTGAACGCCACGAGAATGGCTC
CAAACCCATCGCCCGCCCTCCCCCCCCACCAATTTTGTCGCCAAATTCAG
AAGGTACCGGTAATAGAGCGGACGGGGGGAATAATTATTGACAATTGACT
ACTTTCCATTCTCGTATATCCTCCACACACCCTCGCGTCACAACAAAACG
AACACCAACCTGCACAGCGAGCGCCAGCGCTTTGAAACGATGGTGGCAAG
AGGTGAGGACAAGACAAAAAGCGGCGCCACAGGTTGCTATGGTTGTGTAC
CGGTGGCTTTCGCGTGTGACGCACGCAAGGCTTTGTCTGCATGTCTATAA
AGGCCCCGGTACGCAACCATGACGCGAGGTCTTCATCTCAGCGCTCGTTC
TCTCCGACCCTCTGACTTTCTTCGTCGGTCATTTGTATCGTTAGCTGTCC
CGTCAGCTCCTCCTCTGACGCCCGCCATCATTCCTCTTGGTAACACATAC
CCTGTCAGTGCTTGCCACCTCCTATGGCAACGTGATTTGGTTGGAAAGTG
CCCGGAGGCGCCCGTTGTCGCATCGTCCTCATTCGGCGCAGGTCCGCGCA
CCGCTGTACCATGTCCTTCCCTTCCGCGCTGCGATCGGTTCTACTTCTCA
ACAGATCGGACTCGGATTTCGGCGGATTTTGTCGGCGAGAACGCCAGCAG
CAGCGAAGAGGACGAGGGGTGGGGCGGCAGGGGCGCCTTTCCGCGCGCCG
CCGCGACGTCCCCGATGAAGGCGAAGAGCTTCAAGGAGCGCAACAAGGAG
CACGCGCGCCGCACCAGGCAGCGGCGAAAACAGCACCTGGAGGATCTCAG
ACAACGTTTAAGCGAGCTGCGTGCCGAGGCGCTTGTCTTACGTGCGGCGG
TGGAGGAGCAAAAGACCGCGCTGGCCCTCGTCGCGATGAGCGCCGGAAAC
GTCGTAGACGACGTCGACGTCGTCCCGTTCGATTCCAAGAACGAAATGGC
GCGGCCACCGCCCGCATTGGAAGGCATTCTTGAGCAGTTCGAGGCACTGG
ACACCTCTGTCCTACCGAGCACTTCCGCCGCTGCCATTGCCGCTGCTGTC
TCCACCGCCTCGGCTGGCGCCGCCGCCGATAGGCACGGCGGCCGCACCGG
CAGCGACGGGGACATCAGTGGAAAAGGTGACGGCGCGGACGACGAGTACG
AATACCCGAGCTCGCCTGGCGCCGCGGCTGACCGACGAAACCGCGGCTGC
ACCGCGGAGGAGCGGCAGCAGGCGCGCCGTGAAAGGTGAGCCAAGCAAGG
GAGGACGCTGCCAGGTTGCTATGTATAGGCTCAGGGTCTTTTTTTGGAGA
ATAGATCGGATTGCGCCACGTAAAAGAGTTGGAAAGGCACAGAACTTATG
GAAAGAAAATGCTAGTGTTCCTGCGAGGTCGTTCATTCCTTTTTTCCTTG
TCCATTCCGTTTTCCCTCTGTCTCCCCTTCCTGCTCCATCCCATTTCCAC
CCCTGTGTCCAGGAATCGGATCCACGCCAAGCGGACGCGGCACCGGAAGC
GGCTCTACGTCGAGGCCTGTGAAGTGCTGATCAAACAGCTCTCGATCGAC
AACAGCCGGCGGCGCGAGGGTCTCCGTGCTGGCTGTGGCGGAGCTCTCAG
CTGCGGAGGCTTCGGTGGCGGCGGTGATAACGTGCCCGCCGTTCCACGTG
AGCTCTGCGTCCCCGTGCCGGCCGTCGAGGACGTGACCGTGCTGTGGGAG
TTTACGGCGGGCGTCGAGGCCGGGAGCACCAAGCGGCGGCGCCCCGGCAA
CGGCGTTGGCCCGGCCGTTGCTGCCGCCGCCGCAGTTGTCGCTGGCGGGG
CAACTGCCGGCGCTGGCGCCGCCTTGTCTGTCATCGGCTCCAGAGAGGGC
CGGCCGCTGAAGAGGCGCTGCTCAGGCAGCGCTAGCGTCGTCGGCGGGGA
CGGCAGCGACCTCAATGTTGGCGGCAGCTCTGTCAATTTGGGGCTGGTGA
CCGACGATGGGTCGCTTGTCTGTGACGGTGTCGTGGAGGGCACCGGAGCG
CCCATCCCTGCCGTTCGGCGGGGCAGCGGCAGCAGCGCTGCGTCGGCTGC
TATGAGTGCGGCCACCGAGGTGAGCGGCGCCGAATCTGTCCGCAATAGCC
CCGTCTTCTGCGGCCCCGACACCGTCCGCGGCACCGCCTCCTCTCGTATC
GGTGCCGCCGGCGTCGCCCGCGGCGTCGCGTCCCCGGTGCGGTTGCCGCC
CTCACCGCCGCTGCCATTACCAGCGGTCGAGGGCGCCGCGGCGCGGTGCG
TGCAAGAGTCACCAGTGCCGGCGATCGCGCCTTCGGCCGCGGCCGCCGCC
GCTGGCGCCGCCGCTGCCTTTGCCGCCGACGCTGCCGCTGCCGATGCTGC
CATCTACTGGAGCGCCCCCGTCGAGACGTTTTCGGTTTCGAGCAGCTTCG
CCGCCGAATACGACGGTGTTTACGGTCAGCCCATCACCAGCATCGGCACC
GTGACCAACAGCATCGCTCGCTACGGCTACGACGGCGTCTATGAGCACCG
CGGCACCGTCAAGCCGCTGCCATGGATGCTGGCGGCCCCCCAGCGCTGGG
AGCGGTTTTTTTCCCCGGCTCCTCCGCTTGCGGCGCCGGCGTTGGCGCCG
CGGACGGCTGCCGGGGGCGCTTGCGCTGCGGCTACTCGAGACATGGCGGA
CGTGGTGGCGGCAGAGGAGGGAGTGTGGCGCGCACACCTGCACCTGCCGC
TGCCGCCGCTGCCGACCGCCCTCGGCATGCCGCCACGGCCATCGCCGCGG
CTGCATCCGCCACAGCCGCAGCAGCAGCGACGATTGCCGGAGCCGGATCC
AGAGCCGGAGCTGGCGCCGGAGCCGCCCATGGCGTTGTGGGCCCGGAATG
GCCTCCAGATGGAGGGCCTGGGCTTCGCGTGGGAGGGCGGCGGTGACGGC
GCTGGCGTCCGCAGCGGCATGGGTGGCGTTGGCGGCGGCTTCGGCTGCTT
TGGCGGCAGTGGCCGCAACGGTGAAGGTTACAGCGCCACCGCCGGCTTCG
CCAGAGCCAGCAGCGGCAGCCGCATCAGCGGCGGCGGTAGCGCTGGCGCT
GGCTGCTGGTCCGACCCTTCGGCGTTGCTTGAAGCGTCCAAGCAATGGTT
TAACCCCTGGGTCAAGACATCACGTCCGTCTACGTAGACATCCTGCACGG
AAACTGCACGGAAACTGCACGGAAACTGCATGAAAACGGCACGGAAACTG
CATGAAAACGGCACGGTAACGTTGCCGTCGGACGGACGGGCGGCCGCCGC
ATTGCTGTCTGCCTTGTCAGCAGGCGGCACGGCGACGGATGCGGCCGATG
CAGCCACCGGATGTCGGGCCACCCGGAATGGATGGAAACATGGAAATTCA
AACCCCACGCTGAAACTTGTGTCGGGTAAAACTTTTGCACGCTGTCCAAA
GTAGCCGGGATTCTTGTGGGTTGGTTGGTACGATAGCAGTTGATTTTGAA
AGGATGGTATCTGGGGTAAAGATTGTTTTCAACCGCGGCTCCCCCGCCGC
GGTTGGGTCCGACGGGAGGCCGTTAGGTGGCGGGTTGAGACGGTAGTCAA
GAATGGGCAGTACATGAAGCGGGCGGGCCGTCGTGGGAACTCGCACTGTG
TAAGACGGATTGGCACCAGTCCCGTGCAACAGAAAAGTTCCTGCTCCTGC
CTCTTGCAGGGAGCGGAGCGGAGCGCCACCCATGAATTAGCGCCGGACGC
GGGAGGCGGCGGCACTCCACATATGGGAGCAACGGTTGCAGAACCGCTGC
ACCAAGGTCAAATGCCGTCTCTCAACACGGCCGCTGACATGGAATCATT back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1916:1491..6439- >mRNA_P-wetherbeei_contig1916.2.2 ID=mRNA_P-wetherbeei_contig1916.2.2|Name=mRNA_P-wetherbeei_contig1916.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2319bp|location=Sequence derived from alignment at P-wetherbeei_contig1916:1491..6439- (Phaeothamnion wetherbeei SAG_119_79) ATGGTGGCAAGAGATCGGACTCGGATTTCGGCGGATTTTGTCGGCGAGAA CGCCAGCAGCAGCGAAGAGGACGAGGGGTGGGGCGGCAGGGGCGCCTTTC CGCGCGCCGCCGCGACGTCCCCGATGAAGGCGAAGAGCTTCAAGGAGCGC AACAAGGAGCACGCGCGCCGCACCAGGCAGCGGCGAAAACAGCACCTGGA GGATCTCAGACAACGTTTAAGCGAGCTGCGTGCCGAGGCGCTTGTCTTAC GTGCGGCGGTGGAGGAGCAAAAGACCGCGCTGGCCCTCGTCGCGATGAGC GCCGGAAACGTCGTAGACGACGTCGACGTCGTCCCGTTCGATTCCAAGAA CGAAATGGCGCGGCCACCGCCCGCATTGGAAGGCATTCTTGAGCAGTTCG AGGCACTGGACACCTCTGTCCTACCGAGCACTTCCGCCGCTGCCATTGCC GCTGCTGTCTCCACCGCCTCGGCTGGCGCCGCCGCCGATAGGCACGGCGG CCGCACCGGCAGCGACGGGGACATCAGTGGAAAAGGTGACGGCGCGGACG ACGAGTACGAATACCCGAGCTCGCCTGGCGCCGCGGCTGACCGACGAAAC CGCGGCTGCACCGCGGAGGAGCGGCAGCAGGCGCGCCGTGAAAGGAATCG GATCCACGCCAAGCGGACGCGGCACCGGAAGCGGCTCTACGTCGAGGCCT GTGAAGTGCTGATCAAACAGCTCTCGATCGACAACAGCCGGCGGCGCGAG GGTCTCCGTGCTGGCTGTGGCGGAGCTCTCAGCTGCGGAGGCTTCGGTGG CGGCGGTGATAACGTGCCCGCCGTTCCACGTGAGCTCTGCGTCCCCGTGC CGGCCGTCGAGGACGTGACCGTGCTGTGGGAGTTTACGGCGGGCGTCGAG GCCGGGAGCACCAAGCGGCGGCGCCCCGGCAACGGCGTTGGCCCGGCCGT TGCTGCCGCCGCCGCAGTTGTCGCTGGCGGGGCAACTGCCGGCGCTGGCG CCGCCTTGTCTGTCATCGGCTCCAGAGAGGGCCGGCCGCTGAAGAGGCGC TGCTCAGGCAGCGCTAGCGTCGTCGGCGGGGACGGCAGCGACCTCAATGT TGGCGGCAGCTCTGTCAATTTGGGGCTGGTGACCGACGATGGGTCGCTTG TCTGTGACGGTGTCGTGGAGGGCACCGGAGCGCCCATCCCTGCCGTTCGG CGGGGCAGCGGCAGCAGCGCTGCGTCGGCTGCTATGAGTGCGGCCACCGA GGTGAGCGGCGCCGAATCTGTCCGCAATAGCCCCGTCTTCTGCGGCCCCG ACACCGTCCGCGGCACCGCCTCCTCTCGTATCGGTGCCGCCGGCGTCGCC CGCGGCGTCGCGTCCCCGGTGCGGTTGCCGCCCTCACCGCCGCTGCCATT ACCAGCGGTCGAGGGCGCCGCGGCGCGGTGCGTGCAAGAGTCACCAGTGC CGGCGATCGCGCCTTCGGCCGCGGCCGCCGCCGCTGGCGCCGCCGCTGCC TTTGCCGCCGACGCTGCCGCTGCCGATGCTGCCATCTACTGGAGCGCCCC CGTCGAGACGTTTTCGGTTTCGAGCAGCTTCGCCGCCGAATACGACGGTG TTTACGGTCAGCCCATCACCAGCATCGGCACCGTGACCAACAGCATCGCT CGCTACGGCTACGACGGCGTCTATGAGCACCGCGGCACCGTCAAGCCGCT GCCATGGATGCTGGCGGCCCCCCAGCGCTGGGAGCGGTTTTTTTCCCCGG CTCCTCCGCTTGCGGCGCCGGCGTTGGCGCCGCGGACGGCTGCCGGGGGC GCTTGCGCTGCGGCTACTCGAGACATGGCGGACGTGGTGGCGGCAGAGGA GGGAGTGTGGCGCGCACACCTGCACCTGCCGCTGCCGCCGCTGCCGACCG CCCTCGGCATGCCGCCACGGCCATCGCCGCGGCTGCATCCGCCACAGCCG CAGCAGCAGCGACGATTGCCGGAGCCGGATCCAGAGCCGGAGCTGGCGCC GGAGCCGCCCATGGCGTTGTGGGCCCGGAATGGCCTCCAGATGGAGGGCC TGGGCTTCGCGTGGGAGGGCGGCGGTGACGGCGCTGGCGTCCGCAGCGGC ATGGGTGGCGTTGGCGGCGGCTTCGGCTGCTTTGGCGGCAGTGGCCGCAA CGGTGAAGGTTACAGCGCCACCGCCGGCTTCGCCAGAGCCAGCAGCGGCA GCCGCATCAGCGGCGGCGGTAGCGCTGGCGCTGGCTGCTGGTCCGACCCT TCGGCGTTGCTTGAAGCGTCCAAGCAATGGTTTAACCCCTGGGTCAAGAC ATCACGTCCGTCTACGTAG back to top
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