mRNA_P-wetherbeei_contig1915.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A835Z9X0_9STRA (Tubby C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X0_9STRA) HSP 1 Score: 300 bits (767), Expect = 8.140e-100 Identity = 150/250 (60.00%), Postives = 187/250 (74.80%), Query Frame = 1
Query: 37 LVQCVIMRERTGMYRLYPCYRMYFQDNDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
++QCVI+RER G++RLYP Y++YFQD D L+M AQKH+KSRTSNYHIFDMHR A L KK GNYLGK+R+N+K+T+N I TND+++EE+GA+LFE+PGLVD + +GSQPRKF V LP D P+PH+VDP+ GP +VE LKA +T + LL+TK+P +ENGNYRLNFRGRVTVPSVKNFQLV P + ++ QFGKV DDRFHLD+R + AFQAFAIAL+QFNF
Sbjct: 1 MMQCVILRERQGLHRLYPLYKLYFQDRDTLMMAAQKHSKSRTSNYHIFDMHRGSAA--RTLSKKGGNYLGKVRSNFKKTDNTIYTNDQEKEELGAVLFEKPGLVDHVMEGSQPRKFYVLLPPIDADSTPIPHKVDPYDPQ-----------------GP-MVELLKARRTGKMFLLQTKDPVFENGNYRLNFRGRVTVPSVKNFQLVAPDDVDYIVGQFGKVGDDRFHLDFRAPLNAFQAFAIALSQFNF 230
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A7S3YIB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB9_HETAK) HSP 1 Score: 276 bits (707), Expect = 1.810e-90 Identity = 143/255 (56.08%), Postives = 180/255 (70.59%), Query Frame = 1
Query: 22 GVHSELVQCVIMRERTGMYRLYPCYRMYFQDNDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
G +E+V+C ++R+RTG RLYP YRMYFQD D L +VAQK +K+RTSNYHIFDM R AG G+ L KK+GNYLGKLR+N K+TENVI TND ++EE+GAI FE+ G +DQ+++GSQPRK + LP DG PLP++ E G ++ SL+ ++K GQT + E+K+P +E GNYRLNF GRVTV SVKNFQLV P + V+CQFGKV +DRFHLDYR AFQAFA+ L QFNF
Sbjct: 12 GAGAEMVRCAVVRDRTGARRLYPQYRMYFQDTDTLALVAQKQSKNRTSNYHIFDMMR--AGFGNHLSKKNGNYLGKLRSNSKKTENVIFTNDHEKEELGAITFEKTGFMDQVKEGSQPRKLKIILPQLDPDGIPLPNKP------ERGRPET------------SLLSRVKIGQTGRMFYFESKDPVFEKGNYRLNFHGRVTVASVKNFQLVSPDDIDYVVCQFGKVDEDRFHLDYRAPFNAFQAFAVTLCQFNF 246
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: D7FYS0_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS0_ECTSI) HSP 1 Score: 282 bits (721), Expect = 3.890e-88 Identity = 146/263 (55.51%), Postives = 190/263 (72.24%), Query Frame = 1
Query: 1 LMTAYEHGVHSELVQCVIMRERTGMYRLYPCYRMYFQDN-DKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
LM +YE G +S+LVQCV++R+R+GM RLYP YR +F+ D+L+MVAQK +K+RTSNYH+FDM+R G + L KK+GNYLGK+R N KRTE + TND++ E+GAI FE+PGLVD +RDGSQPRKF V LPA DG+P+ H+VDP+ + DS ++ ++K G+ + LL+++EP+Y GNYRLNF GRVTVPSVKNFQLV P + +CQFGKV +DRFHLDYR I AFQA I++AQFNF
Sbjct: 352 LMLSYERGNNSDLVQCVVVRDRSGMNRLYPQYRFFFEGRGDQLMMVAQKCSKNRTSNYHVFDMNRGGFQ--TRLSKKNGNYLGKVRTNLKRTEATVFTNDQEVAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPY------DADS------------DMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDALHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFNF 594
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A7S2V188_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V188_9STRA) HSP 1 Score: 239 bits (611), Expect = 1.930e-76 Identity = 126/229 (55.02%), Postives = 161/229 (70.31%), Query Frame = 1
Query: 100 MYFQDNDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
MYFQD D+LVMV +K A++RT NYHIFDM R A G+ L KK+GNYLGKLR N ++T+ +I TND +REEMGAI+F +PG VDQ+++GSQPRK V LP DG P+P++ +P D+ SL+E+L++ +T + L+TK+P +E GNYRLNF GRVTV SVKNFQL P + V+CQFGKV +DRFHLDYR + AFQAFA+AL QFNF
Sbjct: 1 MYFQDRDQLVMVGKKQAQNRTPNYHIFDMTR--AQFGNHLSKKNGNYLGKLRTNLRKTDTIIYTNDAEREEMGAIIFNKPGFVDQVKEGSQPRKLHVLLPQLDADGVPVPNKPNPR------RPDT------------SLLERLRSAKTGKMFCLQTKDPVFEKGNYRLNFHGRVTVASVKNFQLCSPDDIDYVVCQFGKVDEDRFHLDYRAPLNAFQAFALALVQFNF 209
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A7S2GC62_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC62_9STRA) HSP 1 Score: 223 bits (568), Expect = 2.150e-69 Identity = 122/266 (45.86%), Postives = 172/266 (64.66%), Query Frame = 1
Query: 7 TAYEHGVHSELVQCVIMRERTGMYRLYPCYRMYFQD-----NDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQ-GLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
T + G + +VQC+I+R+R+G+ RL P Y +Y Q ++KL+++A+K A +YHI+++ R G LRKK GNY+GKL+ + + ENV+ N+ ++E+GA+LF +P ++D MRDG+QPRK V LP A E+ P+P + + F AG L+ +L++ Q + G LE KEP +ENGNYRLNF GRVTVPSVKNFQLV P + V+CQFGKV DDRFHLD++G + FQAF +ALAQFN+
Sbjct: 2 TVVKGGPNDPMVQCLIVRDRSGLKRLNPEYNLYLQGGRKKGSEKLILIARKQAHKNGCSYHIYNVSR--GHMGGRLRKKGGNYVGKLKCSGTKIENVMYNNEEVKDEIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQK-NKFNDPYAG-----------------LLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 247
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A7S2D0G1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D0G1_9STRA) HSP 1 Score: 223 bits (567), Expect = 1.510e-66 Identity = 122/266 (45.86%), Postives = 172/266 (64.66%), Query Frame = 1
Query: 7 TAYEHGVHSELVQCVIMRERTGMYRLYPCYRMYFQD-----NDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQ-GLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
T + G + +VQC+I+R+R+G+ RL P Y +Y Q ++KL+++A+K A +YHI+++ R G LRKK GNY+GKL+ + + ENV+ N+ ++E+GA+LF +P ++D MRDG+QPRK V LP A E+ P+P + + F AG L+ +L++ Q + G LE KEP +ENGNYRLNF GRVTVPSVKNFQLV P + V+CQFGKV DDRFHLD++G + FQAF +ALAQFN+
Sbjct: 221 TVAKGGPNDPMVQCLIVRDRSGLKRLNPEYNLYLQGGRKKGSEKLILIARKQAHKNGCSYHIYNVSR--GHMGGRLRKKGGNYVGKLKCSGTKIENVMYNNEEVKDEIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQK-NKFNDPYAG-----------------LLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 466
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A7S2H5B0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5B0_9STRA) HSP 1 Score: 201 bits (512), Expect = 9.180e-59 Identity = 110/256 (42.97%), Postives = 162/256 (63.28%), Query Frame = 1
Query: 37 LVQCVIMRERTGMYRLYPCYRMYFQD-----NDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQT-QGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
+VQC+I+R R + R+ Y++Y Q ++KL++VA+K A+ + +YHI+++ R G L KK GNY+GKL+ + + ENV+ N+ ++E+G ++F +P ++D MRDG+QPRK + +P E P+P V F+ +GG L+ +++ + QG + E KEP +ENGNYRLNFRGRVTVPSVKNFQLV + + CQFGKVADDRFHLD++ + AFQAF + LAQFN+
Sbjct: 194 MVQCLIVRRRVVLQRITE-YQLYLQGGRKKGHEKLILVARKQAQKQGCSYHIYNVSRGHLG--GRLNKKGGNYVGKLKCSGSKIENVMYNNEEKKQEVGGVMFMKPSIMDHMRDGAQPRKLKLIVPPINEKNCPIPQPVK----------------FNDPYGG--LLAQIQVDEIEQGCSVFERKEPVFENGNYRLNFRGRVTVPSVKNFQLVSTDDVSDIKCQFGKVADDRFHLDFKHPMNAFQAFCVCLAQFNY 428
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A1W0A956_9STRA (Tub domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A956_9STRA) HSP 1 Score: 197 bits (502), Expect = 3.770e-58 Identity = 119/252 (47.22%), Postives = 150/252 (59.52%), Query Frame = 1
Query: 37 LVQCVIMRERTGMYRLYPCYRMYFQDNDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDG--APLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
L + I+R G RL P Y+ + ++ KLV++AQK K+RTSNYHIFDM L KKSGNY+GKLR+ + R ENV++++ ++ E+GAI FE S+PRK V P +DG +P +VD F S LVE+LK GQT L++LE KEP YE G YRLNF GRV+VPSVKNFQLV G V+ QFGKV+D FHLD+R + FQAFAIAL QFNF
Sbjct: 127 LTEGSIVRCNQGANRLTPQYQFFVKN--KLVLLAQKQLKNRTSNYHIFDMSCGTVAASHKLSKKSGNYIGKLRSCFGRHENVMISSQEEKRELGAITFETKS------SHSKPRKLTVICPGLTKDGDAKSVPSKVDSFSS---------------------LVEQLKLGQTSDLIVLENKEPEYEKGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKVSDKLFHLDFRHPLTPFQAFAIALCQFNF 349
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A482S955_9ARCH (Tub domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S955_9ARCH) HSP 1 Score: 192 bits (489), Expect = 2.050e-57 Identity = 114/269 (42.38%), Postives = 161/269 (59.85%), Query Frame = 1
Query: 1 LMTAYEHGVHSELVQCVIMRERTGMY-RLYPCYRMYFQDNDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRA-NYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKL------KAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFN 780
++ A+ GV ++ +QC ++R+R + +LYP Y + ++ K ++ A K + +RTSNYH+FDM R AG S L KK+GNYLGKLRA N R E +L + D+EE+ + FE+ L++Q+ +G+QPRK + + + P V E G + FG PSL + L K + ++LLETKEP ENGNYRLNF GRV +PSVKNFQ+V +LCQFGKV +D FHLD++ A +AFA+AL QFN
Sbjct: 2 VLVAHPRGVRNQHIQCTVVRDRNSVGGKLYPSYELILENPRKTIIKACKMSYNRTSNYHLFDMTRGTAG--SKLSKKAGNYLGKLRARNTNRLECSLLNHKADKEELMGVSFEKMTLINQLTEGTQPRKMRILI-------------LRPDVVTGTTE-----GVYPSNFGSPSLSDLLLDVVDRKKSLPENMMLLETKEPVLENGNYRLNFFGRVNLPSVKNFQIVHYSNIDEILCQFGKVEEDMFHLDFKTPFNALEAFALALCQFN 250
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Match: A0A1V9ZE23_9STRA (Tub domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZE23_9STRA) HSP 1 Score: 187 bits (476), Expect = 4.630e-54 Identity = 115/250 (46.00%), Postives = 149/250 (59.60%), Query Frame = 1
Query: 37 LVQCVIMRERTGMYRLYPCYRMYFQDNDKLVMVAQKHAKSRTSNYHIFDMHRPGAGPGSVLRKKSGNYLGKLRANYKRTENVILTNDRDREEMGAILFERPGLVDQMRDGSQPRKFAVALPAAAEDGAPLPHRVDPFVSAEAGEEDSGSGGFSGGFGGPSLVEKLKAGQTQGLVLLETKEPSYENGNYRLNFRGRVTVPSVKNFQLVRPGEPGLVLCQFGKVADDRFHLDYRG-ICAFQAFAIALAQFNF 783
L + I+R G RL P Y+ + ++ K+V++AQK +RTSNYHIFDM R L KKSGNY+GKLR+++ R ENV+++ ++ E+GAILFE S+PRK V P DG EA S FS SL+E++K G+T L +L+ KEP YE G YRLNF GRV+VPSVKNFQLV G V+ QFGKV+D FHLD+R + FQAFAIAL+QFN+
Sbjct: 145 LTEGSIVRCNHGANRLTPQYQFFIKN--KMVLLAQKQLNNRTSNYHIFDMSRGTGAATYKLSKKSGNYIGKLRSSFGRQENVMISAQAEKRELGAILFETK------TSHSKPRKLTVVCPGLTTDG-------------EAKSVLSTGDKFS------SLLEQVKLGRTADLAILDNKEPEYERGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKVSDKLFHLDFRHPLTPFQAFAIALSQFNY 367 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1915.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1915.4.2 >prot_P-wetherbeei_contig1915.4.2 ID=prot_P-wetherbeei_contig1915.4.2|Name=mRNA_P-wetherbeei_contig1915.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp MTAYEHGVHSELVQCVIMRERTGMYRLYPCYRMYFQDNDKLVMVAQKHAKback to top mRNA from alignment at P-wetherbeei_contig1915:3488..4581+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1915.4.2 ID=mRNA_P-wetherbeei_contig1915.4.2|Name=mRNA_P-wetherbeei_contig1915.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1094bp|location=Sequence derived from alignment at P-wetherbeei_contig1915:3488..4581+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1915:3488..4581+ >mRNA_P-wetherbeei_contig1915.4.2 ID=mRNA_P-wetherbeei_contig1915.4.2|Name=mRNA_P-wetherbeei_contig1915.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig1915:3488..4581+ (Phaeothamnion wetherbeei SAG_119_79)back to top |