mRNA_P-wetherbeei_contig19144.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19144.1.1 vs. uniprot
Match: A0A7C1XE50_9GAMM (DNA polymerase III subunit alpha (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1XE50_9GAMM) HSP 1 Score: 246 bits (627), Expect = 1.740e-77 Identity = 137/249 (55.02%), Postives = 168/249 (67.47%), Query Frame = 1
Query: 16 LHEHAELHCLSNFTFLRGASHPEELVREAHRLGYSALALTDECSLAGVVRAHVVARELGFKLIVGTEVHLRDGLHLVLLADTLLAYQGISTLVTRGRRRQRKGAYELHRDDLELLHDAGLIIFLPGLDDSDDEATAWLAARFGGRVYLGVGLFYSGYDHVLLAHGQTLSARHGLPLVAAGNVHMHAHARKPLQDTLTAIRHGTTVMAAGMRLFANGERYLRPCERLARIYPPALLAASVALAARCDFNL 762
++++AELHCLSNFTFLRGASHPEELV A LGY+ALA+TDECSLAG+VRAHV A+E G LIVGTE+ + +G LVLLA AYQ + L++RGRRR KG Y LH DDL D L+I +P + +D WL GR +L V +G + +A L+ +H +PLVA GNVHMH R+PLQD LTAIRH T V G RLFANGER+LR E LAR+Y A L S+ +AARC F+L
Sbjct: 1 MNDYAELHCLSNFTFLRGASHPEELVATAATLGYAALAITDECSLAGIVRAHVAAKEHGLPLIVGTEIRVEEGHRLVLLAPDDTAYQQLCRLISRGRRRSEKGRYCLHLDDLGEAVDHCLLILIPA-EGTDALPLDWLTRWHHGRAWLAVQRLLTGDEERCIARLTQLARQHHIPLVACGNVHMHVRERRPLQDILTAIRHNTPVARLGHRLFANGERHLRRRETLARLYRRAWLDESLRIAARCRFSL 248
BLAST of mRNA_P-wetherbeei_contig19144.1.1 vs. uniprot
Match: A0A536YGS1_9PROT (PHP domain-containing protein (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YGS1_9PROT) HSP 1 Score: 245 bits (625), Expect = 1.430e-76 Identity = 139/251 (55.38%), Postives = 168/251 (66.93%), Query Frame = 1
Query: 10 APLHEHAELHCLSNFTFLRGASHPEELVREAHRLGYSALALTDECSLAGVVRAHVVARELGFKLIVGTEVHLRDGLHLVLLADTLLAYQGISTLVTRGRRRQRKGAYELHRDDLELLHDAGLIIFLPGLDDSDDEATAWLAARFGGRVYLGVGLFYSGYDHVLLAHGQTLSARHGLPLVAAGNVHMHAHARKPLQDTLTAIRHGTTVMAAGMRLFANGERYLRPCERLARIYPPALLAASVALAARCDFNL 762
+PL +AELHCLSNFTFLRGASHPEELV+ A LGY ALALTDECSLAGVVRAHV A+++G L++G+E+ L+DG LVLLA Y +S L+T GRRR +KG Y L R+DLE L++ P D E ++A RF GR ++ L D LA + L GLPLVAAG+VHMH +RK LQDTLTAIR TTV A G L+ N ER+LR RLARIYPP LL +V +A RC F+L
Sbjct: 114 SPLPAYAELHCLSNFTFLRGASHPEELVKRAAALGYRALALTDECSLAGVVRAHVAAKDVGLPLVIGSEIRLQDGPSLVLLATDREGYGNLSQLITCGRRRTKKGGYSLCRNDLEGGLPGCLVLLAPD-GRYDAEHARFVAERFAGRAWIAAELLQGPDDRARLAGLRELGKVSGLPLVAAGDVHMHVRSRKALQDTLTAIRLRTTVRACGHALYPNAERHLRLLSRLARIYPPELLEETVRVAERCKFSL 363
BLAST of mRNA_P-wetherbeei_contig19144.1.1 vs. uniprot
Match: A0A7L6A8J7_9RHOO (Error-prone DNA polymerase n=1 Tax=Dechloromonas sp. TaxID=1917218 RepID=A0A7L6A8J7_9RHOO) HSP 1 Score: 257 bits (656), Expect = 1.360e-75 Identity = 145/254 (57.09%), Postives = 175/254 (68.90%), Query Frame = 1
Query: 16 LHEHAELHCLSNFTFLRGASHPEELVREAHRLGYSALALTDECSLAGVVRAHVVARELGFKLIVGTEVHLRDGLHLVLLADTLLAYQGISTLVTRGRRRQRKGAYELHRDDLELLHDAG-----LIIFLPGLDDSDDEATAWLAARFGGRVYLGVGLFYSGYDHVLLAHGQTLSARHGLPLVAAGNVHMHAHARKPLQDTLTAIRHGTTVMAAGMRLFANGERYLRPCERLARIYPPALLAASVALAARCDFNL 762
L ++AELHCLSNF+FLRGASHPEELV A GY+ALALTDECSLAGVVRAH+ AR+ G K IVG+E+ + DGL LV LA Y +S L T RRR KGAY L R+DLE L +G L++++P + + E WLAARF GR +L V L D L Q L A GLPLVAAG+VHMHA AR+P+QD LT +R TTV AAG LF NGER+LR RL+R+YPP LLAA++ +AARC F+L
Sbjct: 3 LPDYAELHCLSNFSFLRGASHPEELVERAVAQGYAALALTDECSLAGVVRAHLAARKAGLKFIVGSEMTMADGLKLVFLACNRHGYGNLSALATLARRRAAKGAYTLQRNDLEALSPSGAVPDCLVLWVPPGEAASAEDGRWLAARFPGRCWLAVELHAGPDDSARLEALQALGAACGLPLVAAGDVHMHARARRPVQDVLTVLRLKTTVFAAGYALFPNGERHLRSRLRLSRLYPPELLAATLEIAARCTFSL 256
BLAST of mRNA_P-wetherbeei_contig19144.1.1 vs. uniprot
Match: A0A536SKA2_9PROT (Error-prone DNA polymerase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SKA2_9PROT) HSP 1 Score: 244 bits (623), Expect = 1.860e-75 Identity = 136/251 (54.18%), Postives = 168/251 (66.93%), Query Frame = 1
Query: 10 APLHEHAELHCLSNFTFLRGASHPEELVREAHRLGYSALALTDECSLAGVVRAHVVARELGFKLIVGTEVHLRDGLHLVLLADTLLAYQGISTLVTRGRRRQRKGAYELHRDDLELLHDAGLIIFLPGLDDSDDEATAWLAARFGGRVYLGVGLFYSGYDHVLLAHGQTLSARHGLPLVAAGNVHMHAHARKPLQDTLTAIRHGTTVMAAGMRLFANGERYLRPCERLARIYPPALLAASVALAARCDFNL 762
+PL +AELHCLSNFTFLRGASHPEELV+ A LGYSALA+TDECSLAG VRAH+ A+E+G L++G+E+ L DGL LV+LA Y +S L+TRGRRR +KG+Y L R DL+ L + +P D E ++A RF GR ++ L D LA + L GLPLVAAG+ HMH +R+PLQDTLTAIR GT V A G L N ER+LR RLA+IYP LLA +V +A RC F+L
Sbjct: 3 SPLPAYAELHCLSNFTFLRGASHPEELVKRAAGLGYSALAVTDECSLAGAVRAHIAAKEVGLPLVIGSEIRLNDGLKLVMLATDREGYGDLSELITRGRRRSKKGSYSLGRSDLDGTLSGCLALLVPD-GKHDAEHARFVAERFAGRAWIAAELLRGPDDRARLAGLRELGKVSGLPLVAAGDAHMHVRSRRPLQDTLTAIRLGTPVHACGHALHPNAERHLRLRMRLAQIYPAELLAETVRVAERCRFSL 252
BLAST of mRNA_P-wetherbeei_contig19144.1.1 vs. uniprot
Match: A0A521VNE6_9PROT (PHP domain-containing protein (Fragment) n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VNE6_9PROT) HSP 1 Score: 238 bits (606), Expect = 2.960e-75 Identity = 140/255 (54.90%), Postives = 165/255 (64.71%), Query Frame = 1
Query: 1 MSTAP-LHEHAELHCLSNFTFLRGASHPEELVREAHRLGYSALALTDECSLAGVVRAHVVARELGFKLIVGTEVHLRDGLHLVLLADTLLAYQGISTLVTRGRRRQRKGAYELHRDDLELLHDAGLIIFLPGLDDSDDEATAWLAARFGGRVYLGVGLFYSGYDHVLLAHGQTLSARHGLPLVAAGNVHMHAHARKPLQDTLTAIRHGTTVMAAGMRLFANGERYLRPCERLARIYPPALLAASVALAARCDFNL 762
M++ P L +AELHC+SNFTFLRGASHPEELV A LGYSALALTDECSLAG VRAH A+E G KLI GTE+ L D L +VLLA +Y I+ L+T GRRR RKG Y L R DLE + G++ L D WLA RF GR ++ V L D L + L GLPLVAAG+VHMH +R+ LQD LTAIR G V G L ANGER+LR RLA++YPP LLAA+ +A RC F+L
Sbjct: 1 MASLPELPAYAELHCVSNFTFLRGASHPEELVARAAALGYSALALTDECSLAGAVRAHQAAKEHGLKLIAGTELTLDDDLKVVLLATDRRSYGAIAALITTGRRRGRKGTYALSRADLESAANGGMLALLVSGD------ARWLAERFAGRAWIAVELLCGPNDRARLDALRELGDAVGLPLVAAGDVHMHVRSRRRLQDALTAIRLGRPVAECGRALHANGERHLRLRARLAQLYPPGLLAATREIAERCRFSL 249
BLAST of mRNA_P-wetherbeei_contig19144.1.1 vs. uniprot
Match: A0A7X7PUF6_9GAMM (DNA polymerase III subunit alpha (Fragment) n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7X7PUF6_9GAMM) HSP 1 Score: 240 bits (612), Expect = 5.690e-75 Identity = 134/254 (52.76%), Postives = 170/254 (66.93%), Query Frame = 1
Query: 1 MSTAPLHEHAELHCLSNFTFLRGASHPEELVREAHRLGYSALALTDECSLAGVVRAHVVARELGFKLIVGTEVHLRDGLHLVLLADTLLAYQGISTLVTRGRRRQRKGAYELHRDDLELLHDAGLIIFLPGLDDSDDEATAWLAARFGGRVYLGVGLFYSGYDHVLLAHGQTLSARHGLPLVAAGNVHMHAHARKPLQDTLTAIRHGTTVMAAGMRLFANGERYLRPCERLARIYPPALLAASVALAARCDFNL 762
++ +P +AELHCLSNFTFLRGASHP ELV +AHRLGY+ALALTDECS+AGVVRA+ A++ G KLIVG+E +D LHLVLLA T AY I L+T GRRR KG+Y+L R D D + +++P + +A W+ RF R ++ V L S D L Q+L LPLVA+G+VHMH R+ LQD +TAIRH T+ AG RLF NGERYLRP + LA +YP ALL ++ +A RC F+L
Sbjct: 36 VNVSPSGRYAELHCLSNFTFLRGASHPGELVLQAHRLGYAALALTDECSMAGVVRAYEAAKDCGMKLIVGSEFRTKDDLHLVLLAPTQTAYAQICRLITTGRRRSEKGSYQLSRADFANGLDECIALWIPSRGATPSQAH-WVRERFPDRAWIAVELHRSADDAKYLEALQSLGECSRLPLVASGDVHMHIKERRALQDIVTAIRHRCTLAEAGHRLFPNGERYLRPYDDLASLYPRALLDETLRIADRCRFSL 288
BLAST of mRNA_P-wetherbeei_contig19144.1.1 vs. uniprot
Match: UPI001F0E021B (error-prone DNA polymerase n=2 Tax=unclassified Thioalkalivibrio TaxID=2621013 RepID=UPI001F0E021B) HSP 1 Score: 253 bits (646), Expect = 3.900e-74 Identity = 147/250 (58.80%), Postives = 168/250 (67.20%), Query Frame = 1
Query: 25 HAELHCLSNFTFLRGASHPEELVREAHRLGYSALALTDECSLAGVVRAHVVARELGFKLIVGTEVHLRDGLHLVLLADTLLAYQGISTLVTRGRRRQRKGAYELHRDDLELLHDAG----LIIFLPGLDDSDDEATAWLAARFGGRVYLGVGLFYSGYDHVLLAHGQTLSARHGLPLVAAGNVHMHAHARKPLQDTLTAIRHGTTVMAAGMRLFANGERYLRPCERLARIYPPALLAASVALAARCDFNL 762
+AELHCLSNF+FLRGASHP ELV A LGY ALALTDECS+AGVVRA ARE G KLI+G+E L DGL LVLLA Y + L+TRGRR KG Y L RDDL G L ++LPG +DE W+AA+F GR +L V LF G D LA + L R GLP VAAG+VHMH AR+PLQD +TAIR T + A G RLF NGER+LRP RLAR+YP ALL SVA+AARC F L
Sbjct: 14 YAELHCLSNFSFLRGASHPAELVERAAELGYRALALTDECSVAGVVRAWEAARECGLKLIIGSEFRLEDGLRLVLLAADREGYGRLCRLITRGRRAAPKGDYRLSRDDLVDGQAGGPPGCLALWLPGQAPDEDEGR-WVAAQFPGRAWLAVELFAGGDDAARLAALEALGERLGLPRVAAGDVHMHDPARRPLQDLVTAIRLNTPLHALGRRLFPNGERHLRPRNRLARLYPAALLEESVAIAARCGFTL 262
BLAST of mRNA_P-wetherbeei_contig19144.1.1 vs. uniprot
Match: A0A537BIZ7_9PROT (Error-prone DNA polymerase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BIZ7_9PROT) HSP 1 Score: 239 bits (610), Expect = 5.190e-74 Identity = 139/252 (55.16%), Postives = 169/252 (67.06%), Query Frame = 1
Query: 10 APLHEHAELHCLSNFTFLRGASHPEELVREAHRLGYSALALTDECSLAGVVRAHVVAREL-GFKLIVGTEVHLRDGLHLVLLADTLLAYQGISTLVTRGRRRQRKGAYELHRDDLELLHDAGLIIFLPGLDDSDDEATAWLAARFGGRVYLGVGLFYSGYDHVLLAHGQTLSARHGLPLVAAGNVHMHAHARKPLQDTLTAIRHGTTVMAAGMRLFANGERYLRPCERLARIYPPALLAASVALAARCDFNL 762
A L ++AELHCLSNF+FLRGASH EELV A LGYS LA+TDECSLAG VRAH A+E G KLI+GTE+ L DG+ LVLLA +Y IS+L+T GRRR +KG+Y L R D+E L +G +I L G +DEA W A RF G ++ V L D L + LS R GLPLVAAG+VHMH +R+ LQD LTAIR V G L+ N ER+LR RLA++YPP LLA ++ LA RCDF+L
Sbjct: 2 ACLPDYAELHCLSNFSFLRGASHAEELVERAAALGYSGLAITDECSLAGAVRAHQAAKEQKGLKLILGTEIRLHDGMKLVLLAADRRSYGAISSLITTGRRRSQKGSYSLSRQDVESLGGSGALILLAG-SPGEDEAH-WTAERFSGDAWIAVELHCGPNDRARLNCLKELSRRSGLPLVAAGDVHMHLRSRRRLQDVLTAIRLRRPVNECGHHLYPNAERHLRLRMRLAQLYPPELLAETLTLAERCDFSL 251
BLAST of mRNA_P-wetherbeei_contig19144.1.1 vs. uniprot
Match: G8QKE5_AZOOP (Error-prone DNA polymerase n=6 Tax=Betaproteobacteria TaxID=28216 RepID=G8QKE5_AZOOP) HSP 1 Score: 253 bits (646), Expect = 6.600e-74 Identity = 148/257 (57.59%), Postives = 174/257 (67.70%), Query Frame = 1
Query: 16 LHEHAELHCLSNFTFLRGASHPEELVREAHRLGYSALALTDECSLAGVVRAHVVARELGFKLIVGTEVHLRDGLHLVLLADTLLAYQGISTLVTRGRRRQRKGAYELHRDDLELLHDAG-----LIIFLPG--LDDSDDEATA-WLAARFGGRVYLGVGLFYSGYDHVLLAHGQTLSARHGLPLVAAGNVHMHAHARKPLQDTLTAIRHGTTVMAAGMRLFANGERYLRPCERLARIYPPALLAASVALAARCDFNL 762
L ++AELHCLSNF+FLRGASHPEELV+ A LGY ALA+TDECS AG VRAHV A+ G KLI GTE+ L DGL LVLLA Y +S L+T RRR KGAY L R DLE +G L +++PG D D A WLA RF GR +L V L D L Q L+A GLPL+AAG+VHMH+ AR+PLQD LTA+R TTV AAG L NGER+LRP RLAR+YPP LLA ++A+AARC F+L
Sbjct: 12 LPDYAELHCLSNFSFLRGASHPEELVQRAVELGYGALAVTDECSFAGSVRAHVAAKAAGLKLIHGTEIVLADGLKLVLLAQNREGYGNLSALITLARRRAEKGAYRLTRGDLEGFGPSGALPDCLALWVPGPQFDSPPDPADGRWLAQRFPGRSWLAVELHAGPDDRGRLEQLQQLAADCGLPLLAAGDVHMHSRARRPLQDVLTALRLNTTVFAAGHALHPNGERHLRPRLRLARLYPPELLAETLAVAARCTFSL 268
BLAST of mRNA_P-wetherbeei_contig19144.1.1 vs. uniprot
Match: A0A2W4NXB1_9PROT (Error-prone DNA polymerase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4NXB1_9PROT) HSP 1 Score: 252 bits (643), Expect = 8.820e-74 Identity = 139/246 (56.50%), Postives = 168/246 (68.29%), Query Frame = 1
Query: 25 HAELHCLSNFTFLRGASHPEELVREAHRLGYSALALTDECSLAGVVRAHVVARELGFKLIVGTEVHLRDGLHLVLLADTLLAYQGISTLVTRGRRRQRKGAYELHRDDLELLHDAGLIIFLPGLDDSDDEATAWLAARFGGRVYLGVGLFYSGYDHVLLAHGQTLSARHGLPLVAAGNVHMHAHARKPLQDTLTAIRHGTTVMAAGMRLFANGERYLRPCERLARIYPPALLAASVALAARCDFNL 762
+AELHCL+NFTFLRGAS PEELV A LGY ALA+TDECS+AGVVRAH ARE KLI+G+E L DGL V+LA Y + L+TRGRR KG Y L R D + L +++PG DEA W+ A F GR ++ V LF +G + LA L AR G+PLVA+G+VHMH R+PLQDTLTAIR G TV AG+RL ANGER+LRP ERL ++YPPALL + A+AARC F+L
Sbjct: 2 YAELHCLTNFTFLRGASRPEELVARAVELGYEALAITDECSVAGVVRAHTAARETPLKLIIGSEFRLEDGLRCVVLATNRRGYGRLCRLITRGRRAADKGRYRLTRADFVDTGEDCLALWVPGPRPDPDEAR-WVRAAFPGRAWIAVELFMNGSERRRLAELTELGARLGMPLVASGDVHMHVPERRPLQDTLTAIRLGVTVHEAGLRLHANGERHLRPIERLRKLYPPALLEETRAIAARCTFSL 246 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19144.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19144.1.1 >prot_P-wetherbeei_contig19144.1.1 ID=prot_P-wetherbeei_contig19144.1.1|Name=mRNA_P-wetherbeei_contig19144.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=254bp MSTAPLHEHAELHCLSNFTFLRGASHPEELVREAHRLGYSALALTDECSLback to top mRNA from alignment at P-wetherbeei_contig19144:204..965- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19144.1.1 ID=mRNA_P-wetherbeei_contig19144.1.1|Name=mRNA_P-wetherbeei_contig19144.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig19144:204..965- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19144:204..965- >mRNA_P-wetherbeei_contig19144.1.1 ID=mRNA_P-wetherbeei_contig19144.1.1|Name=mRNA_P-wetherbeei_contig19144.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig19144:204..965- (Phaeothamnion wetherbeei SAG_119_79)back to top |