mRNA_P-wetherbeei_contig1912.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1912.4.1
Unique NamemRNA_P-wetherbeei_contig1912.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: D8LI31_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI31_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 1.050e-100
Identity = 319/666 (47.90%), Postives = 383/666 (57.51%), Query Frame = 1
Query:    1 RRWRFVAGALLATFSHVFAGDPSIAHVEHPFRHFAEWLREVDPDLRNAESNALSRAITVLSKSQKTIKSFDGMAHELGGRIGGADVSTANIERLKAEAAAARDAEKAKVARRLLWKLVNVELALNAAEAAEAAAQPDPIAADAFFAEAGLSPLPMPAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNTAGPVAAFTQAEGAAALSPAEQLPP-----------------------------------------------------------QPLVQSVVVPIPGGAGDGDYGDGAEVRCHVRLDAAGR-----RVVLAVGDSLAGAALVRTLAAPPAELRLASHGLMRETVYANAAAYGAAMAVLKAVGGAIADFLASPAGA--GYSVFCVGHSFGGAVAVLLAGVLDGILNGDNAATSAGLGATKGDKTAAVSASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-------ASDWRRCIGAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAEDDVALAVPGRVWFVKPRRLHRGATMSRVMRGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
            R W    G  LA +    A DPS+   EHPFR+ A WLRE  PD+R+AE  A+SR ITVLS SQ  +KSFDGMA+EL G+I     STA+IE+L  +A     A   K A +L+  L+ VE ALN+AEAAE A+Q DP  A  +  +AGL  LP P   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXX                                                                                      +PL ++ VV + G           EVRC + LD  G      R+V+AVGDSL G AL+ +L   PA ++LASHGLMRET Y N  A+  A  +L+  G  I   +  P GA  GY V C GHSFGGAVA  LAG+LDG ++ + +                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        A  W   +G  R  V  V+LGCPPCLS+NL LPFVT+F+LGDD+VPR S  SL+RL+ RL  V+P+G+GLL++ VA    L +D AGVA+QGVR  +T  EDD  L VPGRVWF KPRRL  GAT+ RVMRGN++ED+LWQ+ D++L+KSMLSHHRLD Y+KILDRV
Sbjct:    8 RCWLVAFGGTLACWV-ALAADPSLQQAEHPFRNLAAWLREASPDMRSAEPKAISRGITVLSNSQSYVKSFDGMAYELKGKIKETG-STADIEKLTGQAELYESASSVKKANKLVRLLIEVERALNSAEAAEIASQSDPSRAAQYMKDAGLRFLPDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPTRVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEPL-EAFVVNVAG----------CEVRCFLMLDERGGEEGEGRLVVAVGDSLTGEALLESLFEEPAVVQLASHGLMRETAYVNRVAFQCACDILEWAGPFIKASV-EPGGAFEGYRVHCAGHSFGGAVAACLAGLLDGAIDVEPSGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRVDGAEPW---VGIRRDGVTCVTLGCPPCLSQNLRLPFVTSFVLGDDMVPRTSHESLRRLKRRLLQVMPKGKGLLSQGVAFSTSLFTDVAGVAMQGVRQATTLGEDDARLTVPGRVWFAKPRRLKNGATLKRVMRGNVKEDMLWQLHDIMLTKSMLSHHRLDKYIKILDRV 656          
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A835YUE7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE7_9STRA)

HSP 1 Score: 291 bits (744), Expect = 5.510e-88
Identity = 237/526 (45.06%), Postives = 305/526 (57.98%), Query Frame = 1
Query:  217 MAHELGGRIGGADVSTANIERLKAEAAAARDAEKAKVARRLLWKLVNVELALNAAEAAEAAAQP--DPIAADAFFAEAGLSPLPMPAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNTAGPVA---AFTQAEGAAALSPAEQLPPQPLVQSVVVPIPGGAGDGDYGDGAEVRCHVRLDAAGRRVVLAVGDSLAGAALVRTLAAPPAELRLASHGLMRETVYANAAAYGAAMAVLKAVGGAIADFLASPAGAGYSVFCVGHSFGGAVAVLLAGVLDGILNGDNAATSAGLGATKGDKTAAVSASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASDWRRCIGAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAEDDVALAVPGRVWFVKPRRLHRGATMSRVMRGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
            MA+E+GGR+  + ++TA++  ++ EA A   A     A +L+  LV +E AL+AAE  E AA    +P  A  + A+AG   +P+PAVPXXXXXXXXXXXXXX                              TAGP +   AFT A+ AAAL+   QLPP P V ++ VP  G  G      GA V C +  +A G+RVV A+ D L G AL+R L+A P  L LA+ GL+ ET++   A + AA A+L A+  A+ +FL SPAGAG +V  VGHSF GAVA + AG+LDG L     A   G G+         S  +                               XXXXXXX +  +   +GAARGRV  V+ GCPPC+S   ALP VT+F+LGDD+VPR+S  SL++L+ RL  VLPRG G   +S+A+G  L +D AGVA QG+R  S A  DD AL VPG VWFVKPRRL  GATM++   G LR+DVLWQ+ DV+L+KSMLSHH L  YV +LDRV
Sbjct:    1 MAYEVGGRMSKSSLTTADVHAVREEALATGSASVESDALKLMELLVEIEKALSAAEIVECAAADLANPDTAADYAAQAGY--VPLPAVPXXXXXXXXXXXXXXQTVADASSDAAQAAMQQGDKDNAGDA----TAGPDSKGGAFTAAD-AAALA---QLPPVPPV-TIPVPAGGDTGSSSSSSGA-VHCRLLYNAQGKRVVAALADDLGGGALLRALSAAPIALPLAARGLLHETLHTAPAVWAAAHALLAAIAPAVLNFLRSPAGAGATVLFVGHSFAGAVAAVAAGLLDGAL-----AVEGGGGSXXXXXX--XSGRRSEGKVGSAEARCKGGSSRRAKGVAEGGDGGMXXXXXXXXSGGY---VGAARGRVKCVTFGCPPCVSGAAALPCVTSFVLGDDMVPRVSAQSLEQLKRRLRQVLPRGSGFFGQSLAMGTTLFTDVAGVAAQGLRQRSAAGGDDSALIVPGTVWFVKPRRLRAGATMTKSRSGALRDDVLWQMHDVMLTKSMLSHHSLARYVAVLDRV 504          
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A4D9DDN3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDN3_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.150e-34
Identity = 139/362 (38.40%), Postives = 191/362 (52.76%), Query Frame = 1
Query:  748 DGAEVRCHVRLDAAGRRVVLAVGDSLAGAALVRTLAAPPAELRLASHGLMRETVYANAAAYGAAMAVLKAVGGAIADFLASPAGAGYSVFCVGHSFGGAVAVLLAGVLDGILNGDNAATSAGLGATKGDKTAAVSASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASDW----RRCIGAARGRVAGVSLGCPPCLSRNLA--LPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGL-----LARSVAIGAGLLSDAAGVAVQGV-RHYSTAAEDDV------ALAVPGRVWFVKPRRLHRGATMSRVMRGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
            +G   R  + +D   RR+ L+VGDSL  A  +  L APP  + L   GL+R ++  N   + AA  V++ V   +    A      Y++  VG S GG+V  L+AGVLDG +  + A  +     T+   T    A++          XXXXXXXXXXXXXXXXXXXXX         S W    R   G A   V        PC+S+N+     F T+FILGDD++PR +  S+KRL +RL   +  G         ARS       +    G  +Q V  H  T  E++       AL +PGRV+++KPR+LH GAT+  VMRGNLREDVLW++ D+ +S+SML HH LD Y+ +L R+
Sbjct:  243 EGGTFRFLLLVDRDSRRLTLSVGDSLTWAQRLDVLRAPPLTVPLRPRGLLRRSMMVNPRLWAAAATVIERVRAVLTT--ARETCPNYALHVVGFSLGGSVGALVAGVLDGTIFVEGAVPAP---PTRRSHTRRGRAARAGVAVPEEGEXXXXXXXXXXXXXXXXXXXXXSS------TSSWAHALRGATGLAHDNVTAFVFAPSPCISKNIRGLRRFTTSFILGDDMMPRATALSIKRLEKRLLDYVSEGDATGIYFDYARS------WMKGVVGATLQQVVTHQVTKKEEEEDEGGVEALILPGRVYYIKPRKLHGGATIKEVMRGNLREDVLWKIHDIFVSQSMLKHHSLDKYITVLARI 587          
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A7S0C3U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3U1_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.480e-24
Identity = 67/173 (38.73%), Postives = 99/173 (57.23%), Query Frame = 1
Query: 1303 GAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAE-DDVALAVPGRVWFVKPRRL-------------HRGATMSRVMRGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
            G  RGR +  +LG PPCLS N+   +VT+ + GDDVVPR   ASL RL  RL   L    G+L ++V    G ++DA  + V G++ +S  +E ++  LA+ G+ + ++PRRL             H   + +   +  LR  VLWQ+ DVLLSKS+ +HH L  Y++ LDR+
Sbjct:  133 GFGRGRTSAFTLGAPPCLSPNVRAGYVTSLMYGDDVVPRTQRASLDRLCTRLQKQLK--GGVLQKTVGKSVGWMTDAVSLTVSGLKTHSHGSEGEETRLALVGKTYLIRPRRLGGGSSACGKISSFHEIGSTTHSAKDALRASVLWQLNDVLLSKSLWNHHALPSYIEGLDRL 303          
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A7S2LJY6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LJY6_9STRA)

HSP 1 Score: 114 bits (284), Expect = 5.000e-23
Identity = 71/165 (43.03%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 1303 GAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAEDDVALAVPGRVWFVKPRRLHRGATMSRVMRG------NLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
            G AR RV+ + LGCPPC+S  + + FVT+ I GDD+VPR S  +L+RL  R    +    G+L + V    G +SDAA + V G+   S+  + D  LAVPGRV+ ++PRR+  G++    + G      N R  VLWQ+ DVLLSKS+  HH    Y++ LDRV
Sbjct:  377 GFARDRVSALCLGCPPCMS-GIEVDFVTSVINGDDIVPRSSYRTLQRLYGRTERSIK--GGILGKGV----GWMSDAARLTVTGLTSGSS-KKKDAHLAVPGRVYLIRPRRIGGGSSSIHEVGGSIGGRENFRAAVLWQLNDVLLSKSLWKHHSQSSYIRSLDRV 533          
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: K0SZK5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZK5_THAOC)

HSP 1 Score: 113 bits (282), Expect = 8.170e-23
Identity = 62/160 (38.75%), Postives = 100/160 (62.50%), Query Frame = 1
Query: 1312 RGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAEDDVALAVPGRVWFVKPRRLHRGATMSRVM----RGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
            + R +   +GCPPC+S N+  PFVT+ + GDDVV R+S+ASL  L +R    +    G + + +    G++SDA  + V G+       + D  L++PGRV+ V+PRRL  G++    +    + +LR  VLWQ+KD+LLS+S+ SHH+++ Y++ LD+V
Sbjct:  370 KDRTSAHCIGCPPCVSANVPCPFVTSIVNGDDVVSRMSQASLHSLYDRTRRCMK--GGFIGKRL----GIMSDAVSLTVSGIGKDK---KGDEKLSLPGRVFLVRPRRLGGGSSSIHEVNDGGKQSLRAAVLWQLKDILLSRSLWSHHQVEGYIRTLDKV 520          
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: B7GAF2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAF2_PHATC)

HSP 1 Score: 112 bits (281), Expect = 1.130e-22
Identity = 69/166 (41.57%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 1303 GAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAEDDVA-LAVPGRVWFVKPRRLHRGATMSRV---MRGN---LREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
            G  + R + V+LG PP +S N+   FVT+ + GDDVV R S ASL RL +R   VL RG  L       G G ++D   +A   ++ ++  +E + A LAVPGR + ++PRRL    ++  V   ++G    LR  VLWQ+ DVLLSKS+  HH+L+ Y++ LDRV
Sbjct:  362 GLGKERCSAVTLGAPPSMSANVPAEFVTSILYGDDVVGRASPASLTRLLKRTHRVLKRGNML-------GFGRVTDTISLAKDSLKTHAHGSEGEEARLAVPGRAYLIRPRRLSHACSIHEVGAQLKGGREALRAAVLWQLNDVLLSKSLWKHHQLESYIQGLDRV 520          
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A6T5V5A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A6T5V5A5_9STRA)

HSP 1 Score: 111 bits (278), Expect = 3.080e-22
Identity = 63/164 (38.41%), Postives = 98/164 (59.76%), Query Frame = 1
Query: 1303 GAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAE-DDVALAVPGRVWFVKPRRLHRGATMSRVM----RGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
            G  +GR +   +G PP LS N+   FVT+ I GDD++ R ++ SL RL  R+   L   RG+  +++    G +SDA  + +  +++++  +E ++  L++PG  +FVKPRRL    ++  V      G +R  VLWQ+ D+LLSKSM  HH LD Y++ LDRV
Sbjct:  386 GYGQGRSSAFIIGSPPVLSPNVRAAFVTSLIHGDDIICRTTKDSLDRLNNRMEKAL--SRGMFTKNI----GWVSDAVSLTMTNLKNHARGSEGEETKLSIPGTKYFVKPRRLGGACSLHHVGDISGTGAIRASVLWQLDDILLSKSMWDHHGLDNYIQALDRV 543          
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A7S1UN44_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UN44_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.220e-21
Identity = 65/165 (39.39%), Postives = 93/165 (56.36%), Query Frame = 1
Query: 1303 GAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAE-DDVALAVPGRVWFVKPRRLHRGATMSRVM-----RGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV 1779
            G  RGR + V+LG PPC+S NL   FV + + GDDVV R +  S++RL  R    +    G L R V    G +SD   +    +R ++  +E ++  L+V G+ + V+PRRL    ++  V      R  LRE +LWQ+ DVLLS S+  HH+LD Y+  LDRV
Sbjct:   52 GFGRGRASAVALGPPPCISSNLKAAFVKSIVYGDDVVCRTTHESIERLLSRTKRSMK--GGFLGRQV----GWMSDTMSLTATSLRSHAQGSEGEEGRLSVAGQAYLVRPRRLGGTCSIHEVGSQKGGREALREKLLWQLNDVLLSDSLWKHHQLDSYIHGLDRV 210          
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Match: A0A7S4AGX7_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AGX7_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.220e-20
Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 1
Query: 1303 GAARGRVAGVSLGCPPCLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARSVAIGAGLLSDAAGVAVQGVRHYSTAAE-DDVALAVPGRVWFVKPRRL------HRGATMSRVMRGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDR 1776
            G  R R + +++G PPCLS N+   F T+F+ GDD++ R ++ S+ RL  R+   L    G + + +    G +SD   + V G++ ++  +E ++  LA+PGR + V+PRRL      H    + +  R  LRE +LWQ+ DVLLS SM  HH L+ YV+ LDR
Sbjct:  432 GLGRARASALAVGSPPCLSSNVVAAFCTSFVYGDDILCRTTKDSIDRLVRRIEKHLH--SGFIGKKL----GWVSDTMSLTVSGLQSHAHGSEGEEEKLAIPGRAYLVRPRRLGGICSIHEVGNLKKGGREALREALLWQMHDVLLSTSMWRHHNLESYVQGLDR 590          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1912.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LI31_ECTSI1.050e-10047.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUE7_9STRA5.510e-8845.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DDN3_9STRA2.150e-3438.40Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S0C3U1_9STRA2.480e-2438.73Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S2LJY6_9STRA5.000e-2343.03Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0SZK5_THAOC8.170e-2338.75Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B7GAF2_PHATC1.130e-2241.57Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6T5V5A5_9STRA3.080e-2238.41Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S1UN44_9STRA1.220e-2139.39Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S4AGX7_9STRA1.220e-2037.58Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1912contigP-wetherbeei_contig1912:3580..5921 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LI31
Model size1782
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons3
Evalue1.72e-101
EggNOG OGs2C0DA@1|root,2S938@2759|Eukaryota
Cds size1782
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186164.497319-CDS-P-wetherbeei_contig1912:3579..38581683186164.497319-CDS-P-wetherbeei_contig1912:3579..3858Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1912 3580..3858 +
1683186164.5075486-CDS-P-wetherbeei_contig1912:4322..51291683186164.5075486-CDS-P-wetherbeei_contig1912:4322..5129Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1912 4323..5129 +
1683186164.5167732-CDS-P-wetherbeei_contig1912:5225..59211683186164.5167732-CDS-P-wetherbeei_contig1912:5225..5921Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1912 5226..5921 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1912.4.1prot_P-wetherbeei_contig1912.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1912 3580..5921 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1912.4.1

>prot_P-wetherbeei_contig1912.4.1 ID=prot_P-wetherbeei_contig1912.4.1|Name=mRNA_P-wetherbeei_contig1912.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=594bp
RRWRFVAGALLATFSHVFAGDPSIAHVEHPFRHFAEWLREVDPDLRNAES
NALSRAITVLSKSQKTIKSFDGMAHELGGRIGGADVSTANIERLKAEAAA
ARDAEKAKVARRLLWKLVNVELALNAAEAAEAAAQPDPIAADAFFAEAGL
SPLPMPAVPAPSPAATAAGPDAAVAEPDASQIGARAGAAGDGAAAVATGA
AGNTAGPVAAFTQAEGAAALSPAEQLPPQPLVQSVVVPIPGGAGDGDYGD
GAEVRCHVRLDAAGRRVVLAVGDSLAGAALVRTLAAPPAELRLASHGLMR
ETVYANAAAYGAAMAVLKAVGGAIADFLASPAGAGYSVFCVGHSFGGAVA
VLLAGVLDGILNGDNAATSAGLGATKGDKTAAVSASKKEGGDSAVAADVA
VVAGAAAAATNTAATAAAAAAAAAVVASDWRRCIGAARGRVAGVSLGCPP
CLSRNLALPFVTAFILGDDVVPRLSEASLKRLRERLASVLPRGRGLLARS
VAIGAGLLSDAAGVAVQGVRHYSTAAEDDVALAVPGRVWFVKPRRLHRGA
TMSRVMRGNLREDVLWQVKDVLLSKSMLSHHRLDYYVKILDRV*
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mRNA from alignment at P-wetherbeei_contig1912:3580..5921+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1912.4.1 ID=mRNA_P-wetherbeei_contig1912.4.1|Name=mRNA_P-wetherbeei_contig1912.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2342bp|location=Sequence derived from alignment at P-wetherbeei_contig1912:3580..5921+ (Phaeothamnion wetherbeei SAG_119_79)
CGGCGATGGAGATTCGTTGCAGGGGCGCTGCTTGCCACGTTCTCGCATGT CTTCGCAGGCGACCCCTCGATTGCACACGTCGAGCACCCTTTCCGCCACT TCGCCGAATGGCTGAGAGAGGTCGACCCCGATCTCCGAAATGCTGAGTCC AACGCGCTGTCACGAGCAATCACGGTGCTGAGCAAGAGTCAAAAGACGAT AAAGTCTTTTGATGGCATGGCGCACGAGCTCGGCGGGCGCATCGGGGGCG CGGATGTGTCCACCGCGAACATCGAACGAGTAAGCTAGAGTTCTGCAGGT GTTTTTCTGCCGCTCTGGCCGTCTATTTAATCATACCAAGTTCTCTATAT TGGAAGAAATGGCTTTCGCAACGTTTTTAAGTAGCACCTGGTTTATCGAA GCTCCCATGCAAACATCGAGTGCGTTTGACTCTGCGGACAAGATACTTGT GCATGGCATGCTCTTTCCGCTAAGTCTATGGCATGTCTTTGTTGCGGAAA AGCCGTAAAATTGCTCTTAGGAGTGTTGCTTTTCCGTCAATCGCGTTTCA GTCTAGTTTGAAGTCCCGAAATTGCATTCCTTTCCCGGTCTTATTCTCCT TTGCTTATGCTAAGCTTTGCGTTCTGTTTTCCGGGTTATGAACGGCATGG TGATTTCCGAGCGACGATCTTTTATTTCCTATTCGCCGCTGCCACCGCCT TGTTACATTTCGTCCCCCCATCCCCCTTCGCCGCCATAAACAGCTCAAGG CGGAGGCGGCCGCCGCCAGAGACGCCGAAAAGGCCAAAGTTGCGCGACGG CTGCTGTGGAAGCTTGTCAACGTGGAGCTAGCCCTCAACGCCGCCGAGGC CGCCGAGGCAGCCGCGCAGCCGGATCCCATCGCCGCCGACGCCTTTTTCG CAGAGGCCGGCCTCTCCCCGCTGCCGATGCCGGCGGTTCCTGCTCCGTCT CCTGCCGCCACTGCCGCGGGTCCTGATGCTGCGGTGGCAGAACCTGACGC GTCACAGATAGGTGCACGGGCGGGAGCGGCGGGGGATGGGGCGGCTGCTG TTGCTACTGGTGCGGCTGGCAATACGGCAGGACCCGTCGCTGCTTTCACG CAGGCGGAAGGAGCTGCTGCCCTGTCGCCTGCAGAACAGCTGCCTCCGCA GCCGCTGGTGCAGTCGGTTGTCGTTCCTATCCCCGGCGGCGCCGGCGACG GCGATTATGGTGACGGCGCTGAGGTCCGCTGCCACGTTCGGCTGGACGCT GCCGGGCGCCGCGTCGTACTGGCGGTGGGCGACTCGTTGGCAGGTGCCGC CCTCGTCCGCACTCTGGCGGCACCGCCGGCCGAGCTTCGATTGGCATCGC ACGGCCTCATGCGGGAGACCGTCTACGCCAACGCCGCGGCCTACGGGGCA GCCATGGCTGTCCTGAAGGCGGTCGGCGGCGCCATTGCTGACTTTCTGGC ATCCCCAGCTGGCGCAGGCTACAGCGTTTTCTGCGTGGGGCACTCGTTTG GTGGTGCCGTTGCGGTGCTGCTGGCGGGAGTGCTGGATGGGATTTTGAAT GTCGGGGCGCCGCCACCGGCGCGGCGGAAGCAGCAGCGGACACCGCGGAG ACTCATGGCTGGGCCGCCGCCGCTGCCACGGCGGGAAAGCGAGGAGGGCG ACAACGCTGCGACATCGGCGGGATTGGGAGCGACGAAAGGAGATAAGACA GCCGCAGTGAGCGCCAGTAAGAAGGAAGGCGGTGATAGCGCAGTGGCGGC CGACGTAGCCGTCGTGGCAGGCGCGGCTGCCGCTGCCACCAACACCGCCG CTACCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTCGTCGCGTCGGACTGG CGGCGGTGCATCGGCGCCGCCAGGGGACGCGTGGCCGGCGTATCGCTCGG CTGCCCGCCGTGCCTGTCACGAAACCTGGCGCTGCCTTTCGTCACGGCTT TTATCCTCGGCGATGACGTCGTCCCGCGGCTGTCCGAGGCGTCTCTGAAA CGGCTCCGGGAGCGCCTCGCGTCGGTGCTGCCGCGCGGCCGGGGCCTGCT GGCGCGCAGCGTGGCCATCGGCGCCGGGCTGCTCTCCGACGCTGCGGGCG TGGCGGTGCAGGGGGTGCGGCACTACAGCACGGCTGCAGAGGATGACGTG GCGCTGGCGGTGCCCGGACGGGTATGGTTCGTCAAACCGCGGCGGCTGCA CCGCGGCGCCACAATGTCCCGCGTGATGCGGGGCAACCTACGGGAGGACG TTCTGTGGCAGGTGAAGGACGTTTTGCTGAGCAAGAGCATGCTTTCGCAC CACCGCCTCGACTATTACGTCAAGATTCTCGACCGTGTTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1912:3580..5921+

>mRNA_P-wetherbeei_contig1912.4.1 ID=mRNA_P-wetherbeei_contig1912.4.1|Name=mRNA_P-wetherbeei_contig1912.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1782bp|location=Sequence derived from alignment at P-wetherbeei_contig1912:3580..5921+ (Phaeothamnion wetherbeei SAG_119_79)
CGGCGATGGAGATTCGTTGCAGGGGCGCTGCTTGCCACGTTCTCGCATGT
CTTCGCAGGCGACCCCTCGATTGCACACGTCGAGCACCCTTTCCGCCACT
TCGCCGAATGGCTGAGAGAGGTCGACCCCGATCTCCGAAATGCTGAGTCC
AACGCGCTGTCACGAGCAATCACGGTGCTGAGCAAGAGTCAAAAGACGAT
AAAGTCTTTTGATGGCATGGCGCACGAGCTCGGCGGGCGCATCGGGGGCG
CGGATGTGTCCACCGCGAACATCGAACGACTCAAGGCGGAGGCGGCCGCC
GCCAGAGACGCCGAAAAGGCCAAAGTTGCGCGACGGCTGCTGTGGAAGCT
TGTCAACGTGGAGCTAGCCCTCAACGCCGCCGAGGCCGCCGAGGCAGCCG
CGCAGCCGGATCCCATCGCCGCCGACGCCTTTTTCGCAGAGGCCGGCCTC
TCCCCGCTGCCGATGCCGGCGGTTCCTGCTCCGTCTCCTGCCGCCACTGC
CGCGGGTCCTGATGCTGCGGTGGCAGAACCTGACGCGTCACAGATAGGTG
CACGGGCGGGAGCGGCGGGGGATGGGGCGGCTGCTGTTGCTACTGGTGCG
GCTGGCAATACGGCAGGACCCGTCGCTGCTTTCACGCAGGCGGAAGGAGC
TGCTGCCCTGTCGCCTGCAGAACAGCTGCCTCCGCAGCCGCTGGTGCAGT
CGGTTGTCGTTCCTATCCCCGGCGGCGCCGGCGACGGCGATTATGGTGAC
GGCGCTGAGGTCCGCTGCCACGTTCGGCTGGACGCTGCCGGGCGCCGCGT
CGTACTGGCGGTGGGCGACTCGTTGGCAGGTGCCGCCCTCGTCCGCACTC
TGGCGGCACCGCCGGCCGAGCTTCGATTGGCATCGCACGGCCTCATGCGG
GAGACCGTCTACGCCAACGCCGCGGCCTACGGGGCAGCCATGGCTGTCCT
GAAGGCGGTCGGCGGCGCCATTGCTGACTTTCTGGCATCCCCAGCTGGCG
CAGGCTACAGCGTTTTCTGCGTGGGGCACTCGTTTGGTGGTGCCGTTGCG
GTGCTGCTGGCGGGAGTGCTGGATGGGATTTTGAATGGCGACAACGCTGC
GACATCGGCGGGATTGGGAGCGACGAAAGGAGATAAGACAGCCGCAGTGA
GCGCCAGTAAGAAGGAAGGCGGTGATAGCGCAGTGGCGGCCGACGTAGCC
GTCGTGGCAGGCGCGGCTGCCGCTGCCACCAACACCGCCGCTACCGCCGC
CGCCGCCGCCGCCGCCGCCGCCGTCGTCGCGTCGGACTGGCGGCGGTGCA
TCGGCGCCGCCAGGGGACGCGTGGCCGGCGTATCGCTCGGCTGCCCGCCG
TGCCTGTCACGAAACCTGGCGCTGCCTTTCGTCACGGCTTTTATCCTCGG
CGATGACGTCGTCCCGCGGCTGTCCGAGGCGTCTCTGAAACGGCTCCGGG
AGCGCCTCGCGTCGGTGCTGCCGCGCGGCCGGGGCCTGCTGGCGCGCAGC
GTGGCCATCGGCGCCGGGCTGCTCTCCGACGCTGCGGGCGTGGCGGTGCA
GGGGGTGCGGCACTACAGCACGGCTGCAGAGGATGACGTGGCGCTGGCGG
TGCCCGGACGGGTATGGTTCGTCAAACCGCGGCGGCTGCACCGCGGCGCC
ACAATGTCCCGCGTGATGCGGGGCAACCTACGGGAGGACGTTCTGTGGCA
GGTGAAGGACGTTTTGCTGAGCAAGAGCATGCTTTCGCACCACCGCCTCG
ACTATTACGTCAAGATTCTCGACCGTGTTTGA
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