mRNA_P-wetherbeei_contig1911.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1911.4.1 vs. uniprot
Match: A0A7S4KP11_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KP11_GUITH) HSP 1 Score: 171 bits (432), Expect = 2.660e-45 Identity = 109/253 (43.08%), Postives = 135/253 (53.36%), Query Frame = 1
Query: 19 IILATDLVPPFSVSLTEEPVMYIGPDSLCLVAHAPRPAYPASTAAAVAARTGLAAIAAGTSRKSAITVLDLCAGSGVQGIAAAALYAAEVVCVDVNPRAVRFARFNAHLNGVADQVTCLFGDLYGALEAGDNGGGVDASETAETLTGSKSGXXXXXXXXXXXXXXXXXXXXXXXXXXESGLQRRHQSGHRRRFDVILANPPFIPVPPATNERLRRYDVFADGGPGGEDILRRIVEGAAAHLSPGGVAAIVSEL 777
+++ TDL+PP S +L EEPVMYIGPDSL LV HAPR K VLDLC GSG+QGIAAA LY +V CVD+N RAVRFARFNA +NGVA +V L GDLY D E GS+S +RRF+VIL+NPPF+PVP +R++RY+VFADGG GE +L+RI+ GA+ HL+ GG AIV+E+
Sbjct: 354 LLMVTDLMPPCSAALEEEPVMYIGPDSLGLVHHAPR--------------------------KEEEAVLDLCCGSGIQGIAAAKLYGKQVTCVDINERAVRFARFNAMINGVASRVKVLQGDLY------------DFHEKMGHEMGSESEVVMS----------------------------------QRRFNVILSNPPFVPVPFDLKKRVKRYNVFADGGEDGEAVLKRIITGASRHLAAGGRVAIVTEI 534
BLAST of mRNA_P-wetherbeei_contig1911.4.1 vs. uniprot
Match: L1IFL4_GUITC (MTS domain-containing protein n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IFL4_GUITC) HSP 1 Score: 159 bits (401), Expect = 6.180e-42 Identity = 108/270 (40.00%), Postives = 135/270 (50.00%), Query Frame = 1
Query: 19 IILATDLVPPFSVSLTEEPVMYIGPDSLCLVAHAPRPAYPASTAAAVAARTGLAAIAAGTSRKSAITVLDLCAGSGVQGIAAAALYAAEVVCVDVNPRAVRFARFNAHLNGVADQVTCLFGDLYGALEAGDNGGGVDASETAETLTGSKSGXXXXXXXXXXXXXXXXXXXXXXXXXXESGLQRRHQSGHRRRFDVILANPPFIPVPPATNERLRRYDVFADG-----------------GPGGEDILRRIVEGAAAHLSPGGVAAIVSEL 777
+++ TDL+PP S +L EEPVMYIGPDSL LV HAPR + VLDLC GSG+QGIAAA LY +V CVD+N RAVRFARFNA +NGVA +V L GDLY D E GS+S +RRF+VIL+NPPF+PVP +R++RY+VFADG G GE +L+RI+ GA+ HL+ GG AIV+E+
Sbjct: 171 LLMVTDLMPPCSAALEEEPVMYIGPDSLGLVHHAPR--------------------------REEEAVLDLCCGSGIQGIAAAKLYGKQVTCVDINERAVRFARFNAMINGVASRVKVLQGDLY------------DFHEKMGHEMGSESEVVMS----------------------------------QRRFNVILSNPPFVPVPFDLKKRVKRYNVFADGRNENTRVKQIRLILVAGGEDGEAVLKRIITGASRHLAAGGRVAIVTEI 368
BLAST of mRNA_P-wetherbeei_contig1911.4.1 vs. uniprot
Match: A0A6H5KPW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW3_9PHAE) HSP 1 Score: 160 bits (406), Expect = 4.800e-41 Identity = 118/305 (38.69%), Postives = 153/305 (50.16%), Query Frame = 1
Query: 16 DIILATDLVPPFSVSLTEEPVMYIGPDSLCLVAHAPRPAYPAST-----AAAVAARTG------------LAAIAAGTSRK---SAITVLDLCAGSGVQGIAAAALYAAE--VVCVDVNPRAVRFARFNAHLNGV--------ADQVTCLFGDLYGALEA-------GDNGGGVDASETAETLTGSKSGXXXXXXXXXXXXXXXXXXXXXXXXXXESGLQRRHQSGHRRRFDVILANPPFIPVPPATNERLRRYDVFADGGPGGEDILRRIVEGAAAHLSPG-GVAAIVSELADPEDYVSKIAAW 816
D++ ATD PP S +LTEEPVMYIGPDS+ LV H P + A V + G A +G R+ + +LDLC+GSGVQGIAAA L E V CVD+NPRAVRF+RFNA LNG+ + + GDLYGAL++ D GG+ ++ LTG++ G + S +D+ILANPPF+PVPP RRYDVFA GG GE ++ I GA L PG G+ A+VSELA+P + +K+ W
Sbjct: 482 DMVFATDWPPPGSTALTEEPVMYIGPDSIGLVQHVPPKSRRGQVEMPERATVVPPQAGSEGGSGKDLDSQCAGGESGDRRRRYRAPEEILDLCSGSGVQGIAAAVLRGGEASVTCVDINPRAVRFSRFNALLNGLNTGGGEEEGGRFRAVVGDLYGALDSTVGDRFSADRAGGLPDADGDNDLTGNERGGHQPSPGAGTSGATPT-------------TRTPASSSSSSLYDLILANPPFVPVPPRLASARRRYDVFASGGSNGEKVIEGIFRGAFDRLRPGSGLLAMVSELANPRTFDAKLRCW 773
BLAST of mRNA_P-wetherbeei_contig1911.4.1 vs. uniprot
Match: A0A7S2SRA9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRA9_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.180e-38 Identity = 113/292 (38.70%), Postives = 134/292 (45.89%), Query Frame = 1
Query: 16 DIILATDLVPPFSVSLTEEPVMYIGPDSLCLVAHAPR-PAYPASTAAAVAARTGLAAIAAGTSRKSAITVLDLCAGSGVQGIAAAALYAAEVVC-VDVNPRAVRFARFNAHLNGVADQVT---------CLF--GDLYGALEAGDNGGGVDASETAETLTGSKSGXXXXXXXXXXXXXXXXXXXXXXXXXXESGLQRRHQSGHRRRFDVILANPPFIPVPPATNERLRRYDVFADGGPGGEDILRRIVEGAAAHLSPGG---------------VAAIVSELADPEDYVSKI 807
D+ LATD PP +V L E PVMYIGPDS+ L+ H PR ++P ST VA G LDLC GSGVQG+ A A+ V VDVNPRAVRF+RFNA +NG A C F GDLY AL + GL HQ+ R+ VILANPPF+PVPP N+ RYDVFADGG G+++LRR+VEGA HL GG IVSE+ P YV +
Sbjct: 20 DMWLATDWCPPLAVDLRESPVMYIGPDSMALLRHLPRRTSWPKSTPHEVAPIGGPPE-----------AWLDLCCGSGVQGLGALVSGRADTVTFVDVNPRAVRFSRFNAAMNGFAQATGVDSSSAFPGCQFFTGDLYNALPT-----------------------------------------------TKDGLVESHQN----RYQVILANPPFVPVPPDLNKEYHRYDVFADGGAAGDEVLRRVVEGAMKHLDLGGDEHAHRGGAALRDTGKVFIVSEVPQPRSYVEDV 249
BLAST of mRNA_P-wetherbeei_contig1911.4.1 vs. uniprot
Match: D8LCV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV5_ECTSI) HSP 1 Score: 141 bits (356), Expect = 1.800e-34 Identity = 106/285 (37.19%), Postives = 141/285 (49.47%), Query Frame = 1
Query: 76 VMYIGPDSLCLVAHAPRPAY-------PASTAAAVAARTG-----------LAAIAAGTSRKSAIT--VLDLCAGSGVQGIAAAALYAAE--VVCVDVNPRAVRFARFNAHLNGV--------ADQVTCLFGDLYGALEA-------GDNGGGVDASETAETLTGSKSGXXXXXXXXXXXXXXXXXXXXXXXXXXESGLQRRHQSGHRRRFDVILANPPFIPVPPATNERLRRYDVFADGGPGGEDILRRIVEGAAAHLSPG-GVAAIVSELADPEDYVSKIAAW 816
VMYIGPDS+ LV H P + ++T AR+G + + G R+ +LDLC+GSGVQGIAAA L E V CVD+NPRAVRF+RFNA LNG+ + + GDLYGAL++ D+ GG ++ L GS+SG + S +D+ILANPPF+PVPP RRYDVFA GG GE+++ I GA L PG G+ A+V+ELA+P + +K+ W
Sbjct: 235 VMYIGPDSIGLVQHVPPKSRRGQGEMPESATVVPPQARSGGEDGKGLDRQCVGGESGGQRRRHRAPEEILDLCSGSGVQGIAAAVLRRGEASVTCVDINPRAVRFSRFNALLNGLDTGGGEQEGGRFRAVVGDLYGALDSTVGDRVSADSAGGFPDADDDNDLNGSESGGHQPSPGDGTSGATPT-------------TRTPASSSSSSLYDLILANPPFVPVPPRLASARRRYDVFASGGSNGEEVIEGIFRGAFDRLRPGSGLLAMVTELANPRAFDAKLRRW 506
BLAST of mRNA_P-wetherbeei_contig1911.4.1 vs. uniprot
Match: A0A836C8B5_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B5_9STRA) HSP 1 Score: 134 bits (337), Expect = 4.940e-34 Identity = 90/206 (43.69%), Postives = 101/206 (49.03%), Query Frame = 1
Query: 217 TVLDLCAGSGVQGIAAAALYAAE-----VVCVDVNPRAVRFARFNAHLNGVADQVTCLFGDLYGALEAGDNGGGVDASETAETLTGSKSGXXXXXXXXXXXXXXXXXXXXXXXXXXESGLQRRHQSGHRRRFDVILANPPFIPVPPATNERLRRYDVFADG-GPGGEDILRRIVEGAAAHLSPGGVAAIVSELADPEDYVSKIAAW 816
TVLDLC GSGVQGIAAAA AA V VDV+ RAVRF RFNA LNG+A VT + GDLY A GD R + ILANPPF+PVPPA N RYDVFA G G GE +LR ++EGA AHL PGG AIVSE+AD E +V + W
Sbjct: 28 TVLDLCCGSGVQGIAAAAAAAARGGECSVTAVDVSARAVRFTRFNAALNGLARCVTAVQGDLYSASGIGD-----------------------------------------------------------RTYAAILANPPFVPVPPALNAISNRYDVFAAGPGARGEGVLRGVIEGACAHLRPGGTLAIVSEVADVERFVGALPQW 174
BLAST of mRNA_P-wetherbeei_contig1911.4.1 vs. uniprot
Match: L8MW92_9CYAN (Carbamoyltransferase n=3 Tax=Pseudanabaena TaxID=1152 RepID=L8MW92_9CYAN) HSP 1 Score: 113 bits (283), Expect = 1.170e-24 Identity = 89/253 (35.18%), Postives = 117/253 (46.25%), Query Frame = 1
Query: 61 LTEEPVMYIGPDSLCLVAHAPRPAYPASTAAAVAARTGLAAIAAGTSRKSAITVLDLCAGSGVQGIAAAALYAAEVVCVDVNPRAVRFARFNAHLNGVADQVTCLFGDLYGALEAGDNGGGVDASETAETLTGSKSGXXXXXXXXXXXXXXXXXXXXXXXXXXESGLQRRHQSGHRRRFDVILANPPFIPVPPATNERLRRYDV-FADGGPGGEDILRRIVEGAAAHLSPGGVAAIVSELADPEDYVSKIAAW 816
++E PVMYIG DS LV AP+ A A +LDLC+GSG+QG+ A+ YA +V +D+NPRA+RFARFNA LNG+ D ++ G+LY E + G RRFD ILANPPF+P P D+ F DGG GE+IL +IV+G+AAHL+ G IVS+L + +DY SK+A W
Sbjct: 891 ISENPVMYIGSDSAGLVYTAPQYA--------------------------AEQILDLCSGSGIQGLVASR-YARQVTAIDINPRAIRFARFNAQLNGI-DNISFHEGNLY------------------EPVRG-------------------------------------------RRFDTILANPPFVPSP--------SKDLGFRDGGATGEEILVQIVKGSAAHLTESGRLFIVSDLVNAKDYQSKLADW 1046
BLAST of mRNA_P-wetherbeei_contig1911.4.1 vs. uniprot
Match: A0A2D9IUG4_9FLAO (Carbamoyltransferase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2D9IUG4_9FLAO) HSP 1 Score: 112 bits (280), Expect = 2.900e-24 Identity = 87/252 (34.52%), Postives = 110/252 (43.65%), Query Frame = 1
Query: 61 LTEEPVMYIGPDSLCLVAHAPRPAYPASTAAAVAARTGLAAIAAGTSRKSAITVLDLCAGSGVQGIAAAALYAAEVVCVDVNPRAVRFARFNAHLNGVADQVTCLFGDLYGALEAGDNGGGVDASETAETLTGSKSGXXXXXXXXXXXXXXXXXXXXXXXXXXESGLQRRHQSGHRRRFDVILANPPFIPVPPATNERLRRYDVFADGGPGGEDILRRIVEGAAAHLSPGGVAAIVSELADPEDYVSKIAAW 816
+ E PVMYIG DS LV APR S+ LDLC GSG+Q I AA Y+ +V VD+NPRA+RFARFNA LNGV++ +T L GDLY +E ++FD ILANPPF+P P +E ++ F DGG GE ILRRIV A HL+ G IV++L D +Y K+ +W
Sbjct: 877 IDESPVMYIGSDSFGLVNTAPR--------------------------NSSNNTLDLCTGSGIQSIIAAK-YSKKVTAVDINPRAIRFARFNAQLNGVSN-ITVLKGDLYNCVE-------------------------------------------------------------NKKFDTILANPPFVPSP---DESMK----FRDGGVNGEAILRRIVNQAPKHLTNNGRLYIVTDLVDVNNYEHKLKSW 1032
BLAST of mRNA_P-wetherbeei_contig1911.4.1 vs. uniprot
Match: A0A1G0KWC7_9GAMM (Carbamoyltransferase n=1 Tax=Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37 TaxID=1798308 RepID=A0A1G0KWC7_9GAMM) HSP 1 Score: 111 bits (277), Expect = 7.260e-24 Identity = 92/253 (36.36%), Postives = 114/253 (45.06%), Query Frame = 1
Query: 58 SLTEEPVMYIGPDSLCLVAHAPRPAYPASTAAAVAARTGLAAIAAGTSRKSAITVLDLCAGSGVQGIAAAALYAAEVVCVDVNPRAVRFARFNAHLNGVADQVTCLFGDLYGALEAGDNGGGVDASETAETLTGSKSGXXXXXXXXXXXXXXXXXXXXXXXXXXESGLQRRHQSGHRRRFDVILANPPFIPVPPATNERLRRYDVFADGGPGGEDILRRIVEGAAAHLSPGGVAAIVSELADPEDYVSKIAAW 816
++ E+PVMYIG DS+ LV APR G + K VLDLC GSGVQ + A+ YA+ VV VD+ PRAVRFARFNA LNG+ D V GDLY A+ AG+ RFD++LANPPF+P P A F DGG GE ILRRIV A HL+P G IV++L D + Y +K++ W
Sbjct: 876 AIAEQPVMYIGLDSMGLVHTAPR----------------------GPAGK----VLDLCTGSGVQALVASR-YASAVVGVDLQPRAVRFARFNAQLNGI-DNVRFAQGDLYAAV-AGE------------------------------------------------------------RFDILLANPPFVPSPHADGL------TFRDGGSEGEAILRRIVAEAVDHLNPSGRLHIVTDLVDLKGYRAKLSDW 1033
BLAST of mRNA_P-wetherbeei_contig1911.4.1 vs. uniprot
Match: A0A800G4J9_9BACT (Methyltransferase domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800G4J9_9BACT) HSP 1 Score: 110 bits (276), Expect = 9.780e-24 Identity = 90/252 (35.71%), Postives = 112/252 (44.44%), Query Frame = 1
Query: 61 LTEEPVMYIGPDSLCLVAHAPRPAYPASTAAAVAARTGLAAIAAGTSRKSAITVLDLCAGSGVQGIAAAALYAAEVVCVDVNPRAVRFARFNAHLNGVADQVTCLFGDLYGALEAGDNGGGVDASETAETLTGSKSGXXXXXXXXXXXXXXXXXXXXXXXXXXESGLQRRHQSGHRRRFDVILANPPFIPVPPATNERLRRYDVFADGGPGGEDILRRIVEGAAAHLSPGGVAAIVSELADPEDYVSKIAAW 816
L EEPVMY+G DS+ LV APR K + LDLC GSG+Q + A YA EVV +D NPRA+RFARFNA LNG+ D V+ GDLY +E+ +F+ I ANPPF+P P E L F DGG GE ILRRIV GAA HL+ GG +IV++L D + Y +K+A+W
Sbjct: 843 LDEEPVMYLGRDSVGLVQVAPR--------------------------KPSRRHLDLCTGSGIQALVARR-YADEVVGIDRNPRALRFARFNAELNGL-DGVSFRLGDLYQPVES-------------------------------------------------------------EQFETITANPPFVPSPV---ESL----AFRDGGADGEKILRRIVTGAAQHLTEGGRLSIVTDLVDIDTYEAKLASW 998 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1911.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1911.4.1 >prot_P-wetherbeei_contig1911.4.1 ID=prot_P-wetherbeei_contig1911.4.1|Name=mRNA_P-wetherbeei_contig1911.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp MPPCDIILATDLVPPFSVSLTEEPVMYIGPDSLCLVAHAPRPAYPASTAAback to top mRNA from alignment at P-wetherbeei_contig1911:5611..6426+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1911.4.1 ID=mRNA_P-wetherbeei_contig1911.4.1|Name=mRNA_P-wetherbeei_contig1911.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=816bp|location=Sequence derived from alignment at P-wetherbeei_contig1911:5611..6426+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1911:5611..6426+ >mRNA_P-wetherbeei_contig1911.4.1 ID=mRNA_P-wetherbeei_contig1911.4.1|Name=mRNA_P-wetherbeei_contig1911.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig1911:5611..6426+ (Phaeothamnion wetherbeei SAG_119_79)back to top |