mRNA_P-wetherbeei_contig19084.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A1F4DFH6_9PROT (DNA repair protein RecO n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4DFH6_9PROT) HSP 1 Score: 313 bits (802), Expect = 2.350e-102 Identity = 156/245 (63.67%), Postives = 187/245 (76.33%), Query Frame = 1
Query: 10 AGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 744
A ++R +G+PAFVLHSYPFRETSLII+ FT + GRVALVARGARRP+S LRGVLLAFQPLLLSW G+ ELRTLHKAEWQGG L G ++CGFYLNEL+LKLL RDD HE L+ Y TL AL +G +HA TLR FE+ L+E GY L LD D SG I A+ Y Y++DRGPV+ DG G +EL+GQTL+D+ D Y++ +TQQQSK LMR LINHCLG+QTL+TRQLL+D+Q L
Sbjct: 5 ADKSRQDGQPAFVLHSYPFRETSLIIQTFTSDLGRVALVARGARRPKSALRGVLLAFQPLLLSWSGRTELRTLHKAEWQGGHAPLKGLAVICGFYLNELLLKLLPRDDPHERLFVVYRETLEALGSGTEHAATLRRFEKSLLQELGYGLMLDRDAESGTPIAAEARYTYVIDRGPVVHHDDGSQNG-----VELSGQTLIDLQSDNYANAVTQQQSKTLMRALINHCLGDQTLHTRQLLRDLQAL 244
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A1F4DHX2_9PROT (DNA repair protein RecO n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DHX2_9PROT) HSP 1 Score: 309 bits (792), Expect = 6.870e-101 Identity = 154/243 (63.37%), Postives = 185/243 (76.13%), Query Frame = 1
Query: 16 RARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 744
++RH+G+PAFVLHSYPFRETSLI+E+FTR+ GRVALVARGARRP+S L GVLLAFQPLLLSW GK +LRTLHKAEW+GG L G L+CGFYLNEL+LKLL RDD HE L+ Y TL AL DHAVTLR FE+ L+E GY L LD D +G IRA+ +Y Y+++RGPV+ D G +EL GQTL+DM D+Y+S + QQSK LMR LINH LGN+TL+TRQLL+D+Q L
Sbjct: 4 KSRHDGQPAFVLHSYPFRETSLIVESFTRDRGRVALVARGARRPKSTLHGVLLAFQPLLLSWSGKMDLRTLHKAEWEGGYTPLKGLSLICGFYLNELLLKLLPRDDPHEQLFAVYRETLEALGRNDDHAVTLRRFEKNLLRELGYGLMLDRDAETGAPIRAELSYTYVMERGPVVQRGDAARNG-----VELTGQTLIDMQSDDYASAASLQQSKLLMRALINHHLGNKTLHTRQLLRDLQAL 241
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A4R3YDM8_9PROT (DNA repair protein RecO n=1 Tax=Sulfurirhabdus autotrophica TaxID=1706046 RepID=A0A4R3YDM8_9PROT) HSP 1 Score: 304 bits (778), Expect = 9.930e-99 Identity = 154/247 (62.35%), Postives = 190/247 (76.92%), Query Frame = 1
Query: 1 MADAGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQ 741
M + +++ E +PA+VLHSYPFRETSLI+E F+RN+GR+A+VARGARRP+S +RG+L+AFQPL L+W GKAEL+TLH AEWQGG PQL G LLCGFYLNELMLKLL RDD HE L+ Y TL +L++ D+A LR FE + L+E GYALT +DV SGE+I D YHY ++ GPV+A +G G ++L+G+TLLDMA D Y PLT QQSK LMR LINH LG+QTL+TRQLLKDMQQ
Sbjct: 1 MGNTQKSQQEAQPAYVLHSYPFRETSLIVEVFSRNFGRLAIVARGARRPKSAVRGLLMAFQPLQLNWFGKAELKTLHSAEWQGGQPQLQGMALLCGFYLNELMLKLLHRDDPHENLFMYYQETLQSLASQRDYAAVLRRFEIRLLQELGYALTFVNDVSSGESIVPDREYHYQIEYGPVVA--EGRNSHQIG--VQLSGKTLLDMAADNYRDPLTLQQSKTLMRTLINHYLGDQTLHTRQLLKDMQQ 243
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A3N5WRZ8_9PROT (DNA repair protein RecO n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WRZ8_9PROT) HSP 1 Score: 300 bits (769), Expect = 2.050e-97 Identity = 153/248 (61.69%), Postives = 182/248 (73.39%), Query Frame = 1
Query: 10 AGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPV---LAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 744
A RAR +G+PA++LH+YP+RETSL+ E +TR+ GRVAL+ARGARRPRS LRGVL+AFQPLLL W GKAEL+TLHKAEWQGG L G L+CGFYLNEL+LKLL R+D HE L+E Y L L + DHA LR FE+ L+E GY L LD +V+ G I Y Y+ +RGPV LAA G +ELAGQTL+DMA D Y+ P T QQSKALMR LINHCLG QTL+TRQLL+D+QQL
Sbjct: 2 AERARRDGQPAYLLHTYPYRETSLVAEIYTRDAGRVALIARGARRPRSALRGVLMAFQPLLLGWSGKAELKTLHKAEWQGGYLPLRGLSLICGFYLNELLLKLLPREDPHERLFEAYADALAQLPHAQDHAAVLRRFERVLLRELGYGLVLDREVVGGTPIEPATRYCYVPERGPVPAGLAAAQSG--------VELAGQTLIDMAVDHYADPQTVQQSKALMRALINHCLGRQTLHTRQLLRDLQQL 241
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A0S8CAS3_9PROT (DNA repair protein RecO n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8CAS3_9PROT) HSP 1 Score: 296 bits (758), Expect = 1.010e-95 Identity = 148/248 (59.68%), Postives = 183/248 (73.79%), Query Frame = 1
Query: 1 MADAGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 744
M+ G+ R + +P FVLHSYPFRETSL++E FTR++GR+ALVARGARRPRS LRGVLL+FQPLLLSW G++ELRTL +AEWQG L G L+CGFYLNEL+LKLL RDD HE L+ Y ATL AL+ +H LR FE Q L+E GYA+ LD D +G+ I D Y Y+++RGPV A +GK +ELAGQTLLDM ++ S +TQQQSKALMR LINH LG Q L+TRQ+L+++Q L
Sbjct: 1 MSTRGQVRQDAQPGFVLHSYPFRETSLVVETFTRDHGRIALVARGARRPRSSLRGVLLSFQPLLLSWTGRSELRTLTRAEWQGAYTALRGETLMCGFYLNELLLKLLPRDDPHERLHGIYQATLAALAADAEHESILRRFELQLLRELGYAVMLDRDAETGDVIHPDQRYVYVVERGPVAAETSA-----SGKGVELAGQTLLDMQSSKFDSAVTQQQSKALMRALINHYLGKQVLHTRQMLRELQDL 243
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A7V8ZNQ2_9BURK (DNA repair protein RecO n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7V8ZNQ2_9BURK) HSP 1 Score: 295 bits (756), Expect = 3.350e-95 Identity = 152/256 (59.38%), Postives = 187/256 (73.05%), Query Frame = 1
Query: 10 AGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDG-----------GGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 744
A +AR + + AFVLH+YPFRETSL+IE F R+ GRVALVARGARRP+S LRG LLAFQPL LSW GK ELRTLH+AEW GGLP L G L+CGFYLNEL+LKLLARDD H L+++Y+A L L+ G+ A LR FE++FL+E GYALTL D +G TI AD Y Y+++RG + A G G GG +E++G+TLLDMARD+YS T QQSK LMR +I+H LG Q+LNTRQL+KD++QL
Sbjct: 3 ADKARQDAQTAFVLHTYPFRETSLVIEIFARDAGRVALVARGARRPKSALRGALLAFQPLALSWFGKNELRTLHRAEWLGGLPMLHGEALICGFYLNELLLKLLARDDPHPLLFDSYHAALQELAGAGEVAPILRRFEKRFLQELGYALTLTRDARNGATIEADRQYAYVMERGALPVAPAGVREKKVESVGPGTGGGKPPLVEISGKTLLDMARDDYSDATTLQQSKLLMRAIIDHYLGAQSLNTRQLMKDLRQL 258
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: UPI001BBF2BE0 (DNA repair protein RecO n=1 Tax=Sulfuricella sp. TaxID=2099377 RepID=UPI001BBF2BE0) HSP 1 Score: 294 bits (753), Expect = 5.160e-95 Identity = 148/244 (60.66%), Postives = 180/244 (73.77%), Query Frame = 1
Query: 16 RARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAA--RDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQ 741
++R E +P FVLH+YPFRETSL++E F+ N+GR+ALVARGARRPRS +RG+LLAFQPL L+W GK+ELRTLH AEWQGG P L G L+CGFYLNEL+LKLL RDD HE L+ Y TL L+ DHA LR FE + LKE GYALTLDH+V SG + A+ Y Y DRGP+L A RDG ++L G+TLLDMA D+Y P TQQQSK LMR L+NH LG Q L+TRQ+LK++ +
Sbjct: 5 KSRQENQPVFVLHTYPFRETSLVVEVFSLNFGRLALVARGARRPRSAVRGLLLAFQPLSLAWFGKSELRTLHAAEWQGGQPLLQGNALICGFYLNELLLKLLPRDDPHEQLFLYYRDTLLELARDPDHAAVLRRFETRLLKELGYALTLDHEVESGTPLEAEQTYTYAFDRGPLLRAAPRDG---------VQLRGKTLLDMAADDYRDPATQQQSKMLMRALLNHYLGEQILHTRQMLKELAE 239
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A4V0X9K8_9PROT (DNA repair protein RecO n=1 Tax=Nitrosomonadaceae bacterium TaxID=2026767 RepID=A0A4V0X9K8_9PROT) HSP 1 Score: 294 bits (753), Expect = 5.530e-95 Identity = 143/245 (58.37%), Postives = 185/245 (75.51%), Query Frame = 1
Query: 10 AGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 744
A + R + EPAFVLH+YP+ ETSL++E FTRN+GR+ ++A+GA+RPRS LRG+LLAFQPL LSW GK+ELRTLHK EWQGG P L G L+CGFYLNEL+++LL R+D HE L+E Y TL ALS+ D+ LR FEQ+ LKE GYALTL +DV + + + A Y Y ++RGP + G GD + L+L+G+TLLDM +YS +T+QQSKALMR ++NH LG+Q L+TRQLLKD+QQL
Sbjct: 3 ANKYRQDTEPAFVLHAYPYLETSLVVETFTRNFGRIPMIAKGAKRPRSALRGLLLAFQPLHLSWAGKSELRTLHKVEWQGGQPSLQGMALICGFYLNELLVRLLRREDPHEQLFEYYQETLIALSSQQDYTPILRHFEQRMLKELGYALTLSYDVTTNKPLNAQEKYCYEIERGPKIL-----GAGDCSRGLQLSGRTLLDMETGDYSDSITRQQSKALMRYILNHYLGDQPLHTRQLLKDLQQL 242
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: UPI0019ADB0ED (DNA repair protein RecO n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019ADB0ED) HSP 1 Score: 294 bits (752), Expect = 1.490e-94 Identity = 154/259 (59.46%), Postives = 186/259 (71.81%), Query Frame = 1
Query: 10 AGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGG------------GGGDAGKRL--ELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 744
A RAR + + AFVLHSYPFRETSL+ E F R+ GR+ALVARGARRP+S LRG LLAFQPL LSW GK ELRTLH+AEW GGLP L G L+CGFYLNEL+LKLLARDD H L++TY L L+ G++A LR FE++ L+E GYALTL HD +G I AD Y Y+++RG + A D G GG GK L E++G+TLLDMA D+YS LT QQSK LMR +I+H LG Q+LNTRQL+KD++QL
Sbjct: 3 ADRARQDAQTAFVLHSYPFRETSLVAEIFARDAGRIALVARGARRPKSALRGSLLAFQPLALSWFGKNELRTLHRAEWLGGLPMLHGEALICGFYLNELLLKLLARDDPHPLLFDTYRDALQELAGAGEYAPILRRFEKRLLQELGYALTLTHDARNGAEIEADRQYTYVMERGAMPVAPDDGKEKKVESGGLELGGKAGGKPLLVEVSGKTLLDMAHDDYSDELTLQQSKLLMRAIIDHYLGAQSLNTRQLMKDLRQL 261
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Match: A0A1G4XJR5_9PROT (DNA repair protein RecO n=5 Tax=Nitrosospira TaxID=35798 RepID=A0A1G4XJR5_9PROT) HSP 1 Score: 291 bits (745), Expect = 8.910e-94 Identity = 146/245 (59.59%), Postives = 184/245 (75.10%), Query Frame = 1
Query: 10 AGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRSVLRGVLLAFQPLLLSWGGKAELRTLHKAEWQGGLPQLTGRGLLCGFYLNELMLKLLARDDAHETLYETYYATLGALSNGGDHAVTLRSFEQQFLKEAGYALTLDHDVMSGETIRADCNYHYLLDRGPVLAARDGGGGGDAGKRLELAGQTLLDMARDEYSSPLTQQQSKALMRMLINHCLGNQTLNTRQLLKDMQQL 744
A + R + +PAFVLH+YP+ ETSL++EAFTRN+GRV LVA+GA+RP+S RG+L AFQPL LSWGGK ELRTLHKAEWQ G L G GL+CGFYLNEL+++LL R+D HE L+ Y L ALSNG D+ LR FEQ+ L+E GYALTLDHD SG I A+ +Y Y ++RGPV + G + L+L G+TLLDM R +YS LT+QQSKALMR ++NH LG++ L+TRQLLK++QQL
Sbjct: 3 ADKQRQDAQPAFVLHTYPYLETSLVVEAFTRNFGRVPLVAKGAKRPKSAFRGLLRAFQPLQLSWGGKTELRTLHKAEWQAGQMPLQGTGLICGFYLNELLVRLLHRNDPHEQLFIYYQEALSALSNGKDYIPILRRFEQRLLQELGYALTLDHDAASGNPIDANEDYCYEIERGPVPS-----NGHRCDQGLQLGGKTLLDMERGDYSDTLTRQQSKALMRYILNHYLGDKPLHTRQLLKNLQQL 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19084.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19084.1.1 >prot_P-wetherbeei_contig19084.1.1 ID=prot_P-wetherbeei_contig19084.1.1|Name=mRNA_P-wetherbeei_contig19084.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=249bp MADAGRARHEGEPAFVLHSYPFRETSLIIEAFTRNYGRVALVARGARRPRback to top mRNA from alignment at P-wetherbeei_contig19084:17..1308+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19084.1.1 ID=mRNA_P-wetherbeei_contig19084.1.1|Name=mRNA_P-wetherbeei_contig19084.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1292bp|location=Sequence derived from alignment at P-wetherbeei_contig19084:17..1308+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19084:17..1308+ >mRNA_P-wetherbeei_contig19084.1.1 ID=mRNA_P-wetherbeei_contig19084.1.1|Name=mRNA_P-wetherbeei_contig19084.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=747bp|location=Sequence derived from alignment at P-wetherbeei_contig19084:17..1308+ (Phaeothamnion wetherbeei SAG_119_79)back to top |