mRNA_P-wetherbeei_contig19071.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19071.1.1
Unique NamemRNA_P-wetherbeei_contig19071.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19071.1.1 vs. uniprot
Match: A0A7C2M0F8_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2M0F8_9HYPH)

HSP 1 Score: 348 bits (893), Expect = 2.810e-117
Identity = 176/282 (62.41%), Postives = 221/282 (78.37%), Query Frame = 1
Query:    1 GGSVDLVARVVAAGLSERLGKQVVPENRAGAGGTVAAELVANAPPDGYTLYQVSLAHAVSPSIYKLNYDPIKAFAPIASLGRGASVLTVTPSLPAGSVKELIALAKSKPGELNAANAGVGSFTHITGELFSLMAGVNIVQLPFKGGGPAMIDVMGGHSHVLFNSYVASTPHIRSGKLKALGVTDTKRTALLPDVPTVAEAGLPGYEAANWWGIAAPAGTPQAIVAKLHAEITAVLDSPAVKKQFEADGADIRKMSTPEFAKFVEAEISKWARVVTQAKIKAE 846
            GGS D+V+R+VAA L +RLGKQ+V +NR GAGG +  E  AN+ PDGYTL  +SLA+AV+P +Y+L YDP+KAFAPIA L  G +VLTV PS+P GSV+ELIALAKS+PGELN A+AG GSF H+  ELF  MAGV+IV +PFKGGGPAMIDV+GGHS VLF+S V +TPHIR+GKLK LG +   RTA+LPDVPT+AEAG+PGYE +NWWGI APAGTPQ ++ KLHAEI AVL S  ++++    GA++      EFA+ ++AE++KW  VV +A IK E
Sbjct:   40 GGSNDVVSRMVAAHLGDRLGKQLVVDNRPGAGGVIGTEAAANSAPDGYTLLVISLAYAVNPGLYQLKYDPVKAFAPIAMLAAGPNVLTVHPSVPVGSVQELIALAKSRPGELNYASAGAGSFQHLGAELFKRMAGVDIVHVPFKGGGPAMIDVIGGHSQVLFSSLVQTTPHIRAGKLKPLGTSGASRTAVLPDVPTIAEAGVPGYEISNWWGIVAPAGTPQPVIDKLHAEIAAVLASAQLQQELATQGAEVAHKGPAEFARHIKAELAKWQDVVRKAGIKRE 321          
BLAST of mRNA_P-wetherbeei_contig19071.1.1 vs. uniprot
Match: A0A6L5FPV2_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FPV2_9HYPH)

HSP 1 Score: 346 bits (888), Expect = 1.610e-116
Identity = 171/280 (61.07%), Postives = 215/280 (76.79%), Query Frame = 1
Query:    1 GGSVDLVARVVAAGLSERLGKQVVPENRAGAGGTVAAELVANAPPDGYTLYQVSLAHAVSPSIYKLNYDPIKAFAPIASLGRGASVLTVTPSLPAGSVKELIALAKSKPGELNAANAGVGSFTHITGELFSLMAGVNIVQLPFKGGGPAMIDVMGGHSHVLFNSYVASTPHIRSGKLKALGVTDTKRTALLPDVPTVAEAGLPGYEAANWWGIAAPAGTPQAIVAKLHAEITAVLDSPAVKKQFEADGADIRKMSTPEFAKFVEAEISKWARVVTQAKIK 840
            GGS D+V R++A  LSERLGKQVV +NR GAGGT+  E+ +   PDGYTL  +S+AHAV P++Y + YDPIK+F P++ L  G +VL V P +P  SVKEL+ LAK KPGEL  A+AGVGSF H++GELF LMAGVN+V +PFKGGGP+MIDV+ G+S  + +S + +TPHI+SGKLKALG + TKR+ +LPDVPT+AE G+ GYEA NWWGI APAGTP AIVAKLH E+ AV DSP ++KQF   GA   KMS+ EFAKF+  E++KW RVV  A I+
Sbjct:   41 GGSNDVVGRLIATQLSERLGKQVVVDNRGGAGGTIGTEIASGTTPDGYTLLVISIAHAVGPALYPIKYDPIKSFTPVSILATGPNVLAVNPKVPVNSVKELVELAKKKPGELFYASAGVGSFQHLSGELFKLMAGVNVVHVPFKGGGPSMIDVIAGNSQYVLSSLIQTTPHIKSGKLKALGTSGTKRSPVLPDVPTIAEGGVHGYEATNWWGIVAPAGTPPAIVAKLHKELAAVQDSPEIQKQFATQGASTVKMSSEEFAKFIGQELAKWGRVVKDANIR 320          
BLAST of mRNA_P-wetherbeei_contig19071.1.1 vs. uniprot
Match: A0A536Z8J1_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=9 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Z8J1_9PROT)

HSP 1 Score: 322 bits (826), Expect = 4.880e-107
Identity = 159/282 (56.38%), Postives = 209/282 (74.11%), Query Frame = 1
Query:    1 GGSVDLVARVVAAGLSERLGKQVVPENRAGAGGTVAAELVANAPPDGYTLYQVSLAHAVSPSIYKLNYDPIKAFAPIASLGRGASVLTVTPSLPAGSVKELIALAKSKPGELNAANAGVGSFTHITGELFSLMAGVNIVQLPFKGGGPAMIDVMGGHSHVLFNSYVASTPHIRSGKLKALGVTDTKRTALLPDVPTVAEAGLPGYEAANWWGIAAPAGTPQAIVAKLHAEITAVLDSPAVKKQFEADGADIRKMSTPEFAKFVEAEISKWARVVTQAKIKAE 846
            GGS D+V R++A  LSERLGKQVV +N+ GAGG +  E VA AP DGYTL  +S+AHA   S+YKL YDPI AFAP+A LG G  VL VT  LP  S+K+L+ALA+ +PG+LN A+AGVGSF H+   LF L +G++IV +PFKGGGPAM+DV+ G++ +   S + + PHIRSG+LK LGV  TKR A LPD+PT++EAG+PGYEA NWWGI APAGTP+ ++ +LH E++ +L S   KK+FE +G +  +MS  EF +F+ +E  KWA+VV +A IK E
Sbjct:   45 GGSNDVVGRMIAFQLSERLGKQVVVDNQGGAGGIIGTEAVARAPADGYTLLLISVAHAFGASMYKLPYDPINAFAPVALLGTGPVVLAVTTKLPVNSLKDLLALARERPGQLNYASAGVGSFQHLASSLFKLQSGLDIVHIPFKGGGPAMMDVIAGNTQIAIGSLIQTLPHIRSGRLKPLGVGSTKRVAALPDLPTISEAGVPGYEATNWWGIVAPAGTPRPVIERLHRELSVILASAETKKRFETEGGEAAQMSPEEFGRFIASETVKWAKVVKEAGIKPE 326          
BLAST of mRNA_P-wetherbeei_contig19071.1.1 vs. uniprot
Match: A0A127F2B8_9HYPH (Extra-cytoplasmic solute receptor BugT n=2 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F2B8_9HYPH)

HSP 1 Score: 323 bits (827), Expect = 4.950e-107
Identity = 162/282 (57.45%), Postives = 215/282 (76.24%), Query Frame = 1
Query:    1 GGSVDLVARVVAAGLSERLGKQVVPENRAGAGGTVAAELVANAPPDGYTLYQVSLAHAVSPSIYKLNYDPIKAFAPIASLGRGASVLTVTPSLPAGSVKELIALAKSKPGELNAANAGVGSFTHITGELFSLMAGVNIVQLPFKGGGPAMIDVMGGHSHVLFNSYVASTPHIRSGKLKALGVTDTKRTALLPDVPTVAEAGLPGYEAANWWGIAAPAGTPQAIVAKLHAEITAVLDSPAVKKQFEADGADIRKMSTPEFAKFVEAEISKWARVVTQAKIKAE 846
            GGS D+V R++   LS++LGKQV+ +NRAGAGG V  E+ A+APPDGYTL  +SLAHAV+P +YKL YDPIK F PI  +G G +V+ V PSLP  S+KEL  LAK +PGEL  A+AG+GSF H+ GELF L AGV+I+ +PFKGGGP+MIDV+GGH+ V+F+S V +TPHI++GKL+A+GV   +R+ +LPDVP+V+E  +P YEA NWWGI APAGTPQ I+ K++A +TA  DSP V+KQF  +GA + + S  EF  ++ +E+ KW +VV +  IKAE
Sbjct:   57 GGSNDVVGRMIGTALSDKLGKQVIIDNRAGAGGVVGTEIAAHAPPDGYTLLVISLAHAVNPWLYKLPYDPIKDFVPIGIMGAGPNVVVVHPSLPVHSIKELFDLAKKQPGELQYASAGIGSFQHLGGELFKLEAGVDILHVPFKGGGPSMIDVIGGHTKVMFSSLVQTTPHIKTGKLRAIGVGSKERSKVLPDVPSVSET-VPTYEAVNWWGIVAPAGTPQPIIDKVYAALTAAQDSPEVEKQFATEGAVVMRKSPAEFGAYMVSEMKKWEQVVKKGGIKAE 337          
BLAST of mRNA_P-wetherbeei_contig19071.1.1 vs. uniprot
Match: A0A537LBN8_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537LBN8_9PROT)

HSP 1 Score: 320 bits (821), Expect = 2.000e-106
Identity = 165/282 (58.51%), Postives = 211/282 (74.82%), Query Frame = 1
Query:    1 GGSVDLVARVVAAGLSERLGKQVVPENRAGAGGTVAAELVANAPPDGYTLYQVSLAHAVSPSIYKLNYDPIKAFAPIASLGRGASVLTVTPSLPAGSVKELIALAKSKPGELNAANAGVGSFTHITGELFSLMAGVNIVQLPFKGGGPAMIDVMGGHSHVLFNSYVASTPHIRSGKLKALGVTDTKRTALLPDVPTVAEAGLPGYEAANWWGIAAPAGTPQAIVAKLHAEITAVLDSPAVKKQFEADGADIRKMSTPEFAKFVEAEISKWARVVTQAKIKAE 846
            GGS D+V R+VA  LSE+LG +V  +NR GAGG +  E  A A PDGYTL  VS+AHAV+P++YKLNYDPIK+FAPI+ L  G +VL V P LP  +V EL+ALAK+KPGEL+ A+AGVGSF H+ GELF L+AGVN+  +P+KGGGPAM DV+ GH  ++F+S V +TP I+SG+L+ALG   T R  +LPDVPT+AEAG+PGYEA NWWGI APA TP  IV +L+ +I  VL SP +K  F+ +GA    MST EF++++E EI KW RVV +  IKA+
Sbjct:   35 GGSNDVVGRLVANQLSEKLGHKVFVDNRGGAGGVLGTEAAAAASPDGYTLLIVSIAHAVNPALYKLNYDPIKSFAPISILATGPNVLAVNPQLPVKTVAELLALAKAKPGELDYASAGVGSFQHLGGELFKLVAGVNLQHVPYKGGGPAMADVIAGHVKIMFSSLVQTTPFIQSGQLRALGTGGTTRNPVLPDVPTIAEAGVPGYEANNWWGIMAPAATPAPIVDRLYRDIQDVLKSPELKAAFDREGASAVTMSTAEFSRYIENEIVKWGRVVKEGNIKAQ 316          
BLAST of mRNA_P-wetherbeei_contig19071.1.1 vs. uniprot
Match: A0A536TZQ7_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TZQ7_9PROT)

HSP 1 Score: 315 bits (807), Expect = 2.850e-104
Identity = 162/282 (57.45%), Postives = 201/282 (71.28%), Query Frame = 1
Query:    1 GGSVDLVARVVAAGLSERLGKQVVPENRAGAGGTVAAELVANAPPDGYTLYQVSLAHAVSPSIYKLNYDPIKAFAPIASLGRGASVLTVTPSLPAGSVKELIALAKSKPGELNAANAGVGSFTHITGELFSLMAGVNIVQLPFKGGGPAMIDVMGGHSHVLFNSYVASTPHIRSGKLKALGVTDTKRTALLPDVPTVAEAGLPGYEAANWWGIAAPAGTPQAIVAKLHAEITAVLDSPAVKKQFEADGADIRKMSTPEFAKFVEAEISKWARVVTQAKIKAE 846
            GGS D+V R++AA LS RL K V+ EN+ GAGG +  E+ A + PDGYTL  +S+A+A  P+IYKL YDP  AF P+A LG G  V+ VT  LP  SVKELIALAK KPGELN A AGVGSF H+  ELF L AGV+IV +PFKGGGPAM+DV+ G++ +   S V   P I++GKLKALGV   KR A LP++PT++EAG+PGYE  NWWGI  PAGTP  +  +LH E+TAV+ S   KK+FE +GA+   MS  EF +F+ AE  KWARVV  A I+AE
Sbjct:   37 GGSNDVVGRMIAAQLSTRLDKPVIVENQGGAGGLIGTEMAARSQPDGYTLLLISVAYAFIPAIYKLPYDPATAFTPVAILGAGPVVIAVTSKLPVNSVKELIALAKEKPGELNYATAGVGSFQHLASELFKLQAGVDIVHIPFKGGGPAMMDVIAGNTQIAIGSLVQMLPQIQAGKLKALGVGSAKRIAALPELPTISEAGVPGYEVTNWWGIVVPAGTPWPVTDRLHKELTAVVSSTETKKRFETEGAEPLSMSPDEFGRFIAAETVKWARVVKDAGIRAE 318          
BLAST of mRNA_P-wetherbeei_contig19071.1.1 vs. uniprot
Match: A0A537DM70_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537DM70_9PROT)

HSP 1 Score: 313 bits (803), Expect = 1.230e-103
Identity = 154/283 (54.42%), Postives = 213/283 (75.27%), Query Frame = 1
Query:    1 GGSVDLVARVVAAGLSERLGKQVVPENRAGAGGTVAAELVANAPPDGYTLYQVSLAHAVSPSIYK-LNYDPIKAFAPIASLGRGASVLTVTPSLPAGSVKELIALAKSKPGELNAANAGVGSFTHITGELFSLMAGVNIVQLPFKGGGPAMIDVMGGHSHVLFNSYVASTPHIRSGKLKALGVTDTKRTALLPDVPTVAEAGLPGYEAANWWGIAAPAGTPQAIVAKLHAEITAVLDSPAVKKQFEADGADIRKMSTPEFAKFVEAEISKWARVVTQAKIKAE 846
            GGS D+VAR+VA  L ERLG+QVV +NR GAGG +  +L A +PPDGYTL  +S+A+A  P++YK L YDP KAFAP+  LG GA+ LTV PSLP  +V+ELIALAK+KPG LN A+AGVGS  H+   LF + AG+++V +P+KGGGPAM DV+ G + ++  S +   PHI+SG+L+ LG + T+R+A+LPDVPT++E+G+PGYEA NWWG+ APAGTP  ++ +LH ++T+VL S   +K+FE +GA++ +M+  EF  F+ AE+ KW+RV  +  IKAE
Sbjct:   38 GGSNDIVARMVATQLGERLGQQVVIDNRGGAGGVLGTDLAAKSPPDGYTLLLISVAYAFGPALYKNLPYDPEKAFAPVGILGSGAAALTVHPSLPVSTVRELIALAKAKPGALNYASAGVGSLQHLACALFMIQAGIDVVHVPYKGGGPAMADVIAGQAQIVMPSLIQVVPHIKSGRLRVLGTSGTRRSAVLPDVPTISESGVPGYEAHNWWGLLAPAGTPAPVIERLHRDLTSVLASRETEKRFETEGAEVVRMTPAEFGGFISAELVKWSRVAREVGIKAE 320          
BLAST of mRNA_P-wetherbeei_contig19071.1.1 vs. uniprot
Match: A0A0S8BSF4_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8BSF4_9PROT)

HSP 1 Score: 311 bits (797), Expect = 1.180e-102
Identity = 154/284 (54.23%), Postives = 214/284 (75.35%), Query Frame = 1
Query:    1 GGSVDLVARVVAAGLSERLGKQVVPENRAGAGGTVAAELVANAPPDGYTLYQVSLAHAVSPSIYK--LNYDPIKAFAPIASLGRGASVLTVTPSLPAGSVKELIALAKSKPGELNAANAGVGSFTHITGELFSLMAGVNIVQLPFKGGGPAMIDVMGGHSHVLFNSYVASTPHIRSGKLKALGVTDTKRTALLPDVPTVAEAGLPGYEAANWWGIAAPAGTPQAIVAKLHAEITAVLDSPAVKKQFEADGADIRKMSTPEFAKFVEAEISKWARVVTQAKIKAE 846
            GGS D+V R++ A L+ +LG+QVV +NRAGAGG + +E+ + A PDGYTL  +S+A+A +PSI+K  L +DP K+F P+A LG G + LTV P L A SVKEL+A+AK+KPG LN A+AG+GSF H+  E+F +MAG+NIV +PFKGGGPAM DV+ G++ +   S +   PHI+SG+L+ LGV    RT+ LPDVPT+AEAG+PGYEA NWWGI APAGTP ++V ++HA++ A+L  P ++K+FE+ GA    MS+ EF +F++ E +KW +VV +A IKA+
Sbjct:   42 GGSNDIVGRMIGAELTNKLGQQVVIDNRAGAGGMIGSEIASKAAPDGYTLLIISVAYAYNPSIFKSRLKFDPAKSFTPVAILGTGPNALTVNPKLAAKSVKELVAMAKAKPGVLNYASAGIGSFQHLGTEMFRIMAGINIVNVPFKGGGPAMADVIAGNTQMCMGSLLQLIPHIQSGRLRPLGVGSKTRTSALPDVPTIAEAGVPGYEANNWWGIMAPAGTPASVVKRVHADVAAILAMPKIQKRFESQGAAAVSMSSAEFGQFIKTETAKWGKVVREAGIKAQ 325          
BLAST of mRNA_P-wetherbeei_contig19071.1.1 vs. uniprot
Match: A0A536SPS4_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SPS4_9PROT)

HSP 1 Score: 311 bits (796), Expect = 1.560e-102
Identity = 153/282 (54.26%), Postives = 207/282 (73.40%), Query Frame = 1
Query:    1 GGSVDLVARVVAAGLSERLGKQVVPENRAGAGGTVAAELVANAPPDGYTLYQVSLAHAVSPSIYKLNYDPIKAFAPIASLGRGASVLTVTPSLPAGSVKELIALAKSKPGELNAANAGVGSFTHITGELFSLMAGVNIVQLPFKGGGPAMIDVMGGHSHVLFNSYVASTPHIRSGKLKALGVTDTKRTALLPDVPTVAEAGLPGYEAANWWGIAAPAGTPQAIVAKLHAEITAVLDSPAVKKQFEADGADIRKMSTPEFAKFVEAEISKWARVVTQAKIKAE 846
            GGS D+V R++A  LSERLG+QVV +N+ GAGG +  E  A + PDG+TL  +S A+A   S+YKL YDP  AFAP+A LG G  VL V   LP  +++ELIALAK+KPGELN A+AGVGSF H+   LF L +G++IV +PFKGGGPAM+DV+ G++ +   S + + PHI+SG+LK LGV   KR   LPDVPT++EAG+PGYEA NWWGI APAGTP+ ++ +LH E++ +L S   KK+FE++G +  +MS  EF +F+ +E+ KWA+VV +A I+AE
Sbjct:   42 GGSNDVVGRMIAFQLSERLGRQVVADNQGGAGGIIGTEAAAKSAPDGHTLLLISSAYAFGASMYKLPYDPATAFAPVALLGTGPVVLAVNAKLPVNTLRELIALAKAKPGELNYASAGVGSFQHLASALFKLQSGLDIVHVPFKGGGPAMMDVIAGNTQIAIGSLIQTLPHIKSGRLKPLGVGSAKRVPALPDVPTISEAGVPGYEATNWWGIVAPAGTPRPVIERLHKELSVILASAETKKRFESEGGEAAQMSPEEFGRFIASEMEKWAKVVKEAGIRAE 323          
BLAST of mRNA_P-wetherbeei_contig19071.1.1 vs. uniprot
Match: A0A7C3JHL5_9DELT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3JHL5_9DELT)

HSP 1 Score: 310 bits (795), Expect = 2.290e-102
Identity = 157/282 (55.67%), Postives = 200/282 (70.92%), Query Frame = 1
Query:    1 GGSVDLVARVVAAGLSERLGKQVVPENRAGAGGTVAAELVANAPPDGYTLYQVSLAHAVSPSIYKLNYDPIKAFAPIASLGRGASVLTVTPSLPAGSVKELIALAKSKPGELNAANAGVGSFTHITGELFSLMAGVNIVQLPFKGGGPAMIDVMGGHSHVLFNSYVASTPHIRSGKLKALGVTDTKRTALLPDVPTVAEAGLPGYEAANWWGIAAPAGTPQAIVAKLHAEITAVLDSPAVKKQFEADGADIRKMSTPEFAKFVEAEISKWARVVTQAKIKAE 846
            GGS D+V R +A  LS +LGKQVV +NRAGAGG V  E+ A A PDGYTL  +S A+A + S+Y L YDP+KAF P+A LG G +V  V PS+P  SVKE  ALAK +PG+LN A AGVGSF H+  ELF  MA +++  + FKGGGPAMIDV+GGH+H    S +   PHI+SGK+KALG    KRTA LPDVPT+AEAGLPGYEA NWWGI APAGTP+ I+ +L+ EI+ +L +    K F   GA++ ++   EF  ++ AE +KW +V+ +A IKAE
Sbjct:   43 GGSNDIVGRFIATKLSAQLGKQVVVDNRAGAGGVVGTEVAAKADPDGYTLLVISSAYAANTSLYNLPYDPVKAFTPVAKLGTGPNVFAVHPSVPVNSVKEFTALAKERPGQLNFAAAGVGSFQHLGSELFKSMAKIDVGIVQFKGGGPAMIDVIGGHTHAALGSLIQFMPHIKSGKVKALGTGGAKRTATLPDVPTIAEAGLPGYEANNWWGILAPAGTPRPIIDRLYKEISTILSAAETHKVFSEQGAEVDRLGPAEFGPYIIAETAKWGKVIKEANIKAE 324          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19071.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2M0F8_9HYPH2.810e-11762.41Tripartite tricarboxylate transporter substrate bi... [more]
A0A6L5FPV2_9HYPH1.610e-11661.07Tripartite tricarboxylate transporter substrate bi... [more]
A0A536Z8J1_9PROT4.880e-10756.38Tripartite tricarboxylate transporter substrate bi... [more]
A0A127F2B8_9HYPH4.950e-10757.45Extra-cytoplasmic solute receptor BugT n=2 Tax=Rho... [more]
A0A537LBN8_9PROT2.000e-10658.51Tripartite tricarboxylate transporter substrate bi... [more]
A0A536TZQ7_9PROT2.850e-10457.45Tripartite tricarboxylate transporter substrate bi... [more]
A0A537DM70_9PROT1.230e-10354.42Tripartite tricarboxylate transporter substrate bi... [more]
A0A0S8BSF4_9PROT1.180e-10254.23Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A536SPS4_9PROT1.560e-10254.26Tripartite tricarboxylate transporter substrate bi... [more]
A0A7C3JHL5_9DELT2.290e-10255.67Tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19071contigP-wetherbeei_contig19071:459..1307 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1268622.AVS7_03045
PFAMsTctC
Model size849
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.78e-88
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2VHK8@28216|Betaproteobacteria,4ABD6@80864|Comamonadaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size849
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186163.057219-CDS-P-wetherbeei_contig19071:458..13071683186163.057219-CDS-P-wetherbeei_contig19071:458..1307Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19071 459..1307 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19071.1.1prot_P-wetherbeei_contig19071.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19071 459..1307 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19071.1.1

>prot_P-wetherbeei_contig19071.1.1 ID=prot_P-wetherbeei_contig19071.1.1|Name=mRNA_P-wetherbeei_contig19071.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp
GGSVDLVARVVAAGLSERLGKQVVPENRAGAGGTVAAELVANAPPDGYTL
YQVSLAHAVSPSIYKLNYDPIKAFAPIASLGRGASVLTVTPSLPAGSVKE
LIALAKSKPGELNAANAGVGSFTHITGELFSLMAGVNIVQLPFKGGGPAM
IDVMGGHSHVLFNSYVASTPHIRSGKLKALGVTDTKRTALLPDVPTVAEA
GLPGYEAANWWGIAAPAGTPQAIVAKLHAEITAVLDSPAVKKQFEADGAD
IRKMSTPEFAKFVEAEISKWARVVTQAKIKAE*
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mRNA from alignment at P-wetherbeei_contig19071:459..1307-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19071.1.1 ID=mRNA_P-wetherbeei_contig19071.1.1|Name=mRNA_P-wetherbeei_contig19071.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig19071:459..1307- (Phaeothamnion wetherbeei SAG_119_79)
GGGGGAAGCGTAGATCTCGTCGCGCGCGTGGTGGCGGCCGGATTGAGTGA ACGGCTGGGCAAGCAGGTGGTGCCCGAGAACCGTGCCGGGGCGGGCGGTA CGGTCGCCGCCGAACTGGTCGCGAATGCGCCGCCTGATGGCTATACGCTG TACCAGGTCTCGCTGGCGCATGCAGTCAGTCCCTCTATCTACAAGCTGAA CTATGATCCGATCAAAGCCTTTGCGCCGATAGCCTCTCTGGGTCGCGGCG CCAGCGTGCTGACGGTGACGCCATCGCTTCCCGCTGGCTCGGTCAAGGAG TTGATCGCTCTGGCCAAGTCGAAGCCAGGCGAACTCAACGCAGCGAACGC CGGCGTCGGCAGCTTCACACACATCACCGGCGAATTGTTCTCGCTGATGG CGGGGGTGAATATCGTGCAGCTACCTTTCAAGGGCGGCGGGCCTGCGATG ATCGACGTCATGGGCGGGCATTCGCATGTTTTGTTCAACTCGTATGTGGC CTCGACGCCGCATATCCGCTCTGGAAAGCTGAAGGCATTGGGCGTCACCG ATACGAAGCGAACCGCGTTGCTGCCCGATGTGCCGACGGTGGCTGAAGCG GGCTTGCCCGGCTACGAGGCGGCGAACTGGTGGGGCATCGCGGCGCCAGC GGGAACGCCGCAGGCGATCGTGGCCAAGCTTCACGCGGAAATCACGGCGG TGCTCGATTCGCCGGCAGTGAAGAAGCAGTTCGAGGCCGACGGCGCCGAT ATCAGGAAGATGAGCACGCCCGAGTTCGCCAAGTTCGTCGAGGCTGAAAT CTCGAAGTGGGCGCGCGTCGTCACCCAGGCCAAGATCAAGGCGGAATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19071:459..1307-

>mRNA_P-wetherbeei_contig19071.1.1 ID=mRNA_P-wetherbeei_contig19071.1.1|Name=mRNA_P-wetherbeei_contig19071.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig19071:459..1307- (Phaeothamnion wetherbeei SAG_119_79)
GGGGGAAGCGTAGATCTCGTCGCGCGCGTGGTGGCGGCCGGATTGAGTGA
ACGGCTGGGCAAGCAGGTGGTGCCCGAGAACCGTGCCGGGGCGGGCGGTA
CGGTCGCCGCCGAACTGGTCGCGAATGCGCCGCCTGATGGCTATACGCTG
TACCAGGTCTCGCTGGCGCATGCAGTCAGTCCCTCTATCTACAAGCTGAA
CTATGATCCGATCAAAGCCTTTGCGCCGATAGCCTCTCTGGGTCGCGGCG
CCAGCGTGCTGACGGTGACGCCATCGCTTCCCGCTGGCTCGGTCAAGGAG
TTGATCGCTCTGGCCAAGTCGAAGCCAGGCGAACTCAACGCAGCGAACGC
CGGCGTCGGCAGCTTCACACACATCACCGGCGAATTGTTCTCGCTGATGG
CGGGGGTGAATATCGTGCAGCTACCTTTCAAGGGCGGCGGGCCTGCGATG
ATCGACGTCATGGGCGGGCATTCGCATGTTTTGTTCAACTCGTATGTGGC
CTCGACGCCGCATATCCGCTCTGGAAAGCTGAAGGCATTGGGCGTCACCG
ATACGAAGCGAACCGCGTTGCTGCCCGATGTGCCGACGGTGGCTGAAGCG
GGCTTGCCCGGCTACGAGGCGGCGAACTGGTGGGGCATCGCGGCGCCAGC
GGGAACGCCGCAGGCGATCGTGGCCAAGCTTCACGCGGAAATCACGGCGG
TGCTCGATTCGCCGGCAGTGAAGAAGCAGTTCGAGGCCGACGGCGCCGAT
ATCAGGAAGATGAGCACGCCCGAGTTCGCCAAGTTCGTCGAGGCTGAAAT
CTCGAAGTGGGCGCGCGTCGTCACCCAGGCCAAGATCAAGGCGGAATAA
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