mRNA_P-wetherbeei_contig19046.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19046.1.1 vs. uniprot
Match: A0A7X8XME5_9BURK (Segregation/condensation protein A n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XME5_9BURK) HSP 1 Score: 87.4 bits (215), Expect = 9.820e-19 Identity = 49/101 (48.51%), Postives = 70/101 (69.31%), Query Frame = 1
Query: 1 PEWLELDVSVEALAAAWVRLDTSVRAPRQPIELKKVQISVPERAVQIFEWLRRRSQGLFSQLVGAQRSRSYVVVTFLALLELVRRSRVRVSQENWQSDLVI 303
P+ EL+VSVEALAAA RL++S RAPR P+ ++K+ +SVPER +++ R+ F L+GA+ +RS VVVTFLALLEL RR +V + Q+ D+ +
Sbjct: 148 PDEPELEVSVEALAAAMRRLESSPRAPRDPVAVEKMVLSVPERIRELWSLFIRQPLTCFRDLLGARPTRSLVVVTFLALLELARRRKVTLRQQTTVGDIEV 248
BLAST of mRNA_P-wetherbeei_contig19046.1.1 vs. uniprot
Match: A0A355TUS1_9BACT (Uncharacterized protein n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TUS1_9BACT) HSP 1 Score: 69.3 bits (168), Expect = 6.890e-12 Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 1
Query: 13 ELDVSVEALAAAWVRLDTSVRAPRQPIELKKVQISVPERAVQIFEWLRRRSQGLFSQLVGAQRSRSYVVVTFLALLELVRRSRVRVSQ 276
EL VS+EALA+ + RL + R +PI L +V +SVPER Q+ + ++ + F LVG RSYVVVTFLALL++V+ ++ Q
Sbjct: 158 ELQVSLEALASTFQRLSKAGRNVNRPITLNRVSVSVPERIEQLSQQIKAKHVYSFWGLVGKNYDRSYVVVTFLALLQMVKEGKLHADQ 245
BLAST of mRNA_P-wetherbeei_contig19046.1.1 vs. uniprot
Match: A0A2V6UNM8_9BACT (Chromosome segregation protein ScpA n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6UNM8_9BACT) HSP 1 Score: 64.3 bits (155), Expect = 7.570e-10 Identity = 45/96 (46.88%), Postives = 56/96 (58.33%), Query Frame = 1
Query: 19 DVSVEALAAAWVRLDTSVRAPRQPIELKKVQISVPERAVQIFEWLRRRSQGLFSQLVGAQRSRSYVVVTFLALLELVRRSRVRVSQENWQSDLVIE 306
D+SV+ LA A+ RL T R R P ++ SV ER +I LR LFS +VG +R R+ +VVTFLALLELVR R R Q D+VIE
Sbjct: 213 DLSVDLLARAFERLVTEQRR-RAPRAVEPEPPSVLERMAEIVSLLRSTWSLLFSTVVGTERERAELVVTFLALLELVRLGRARAQQTELFGDIVIE 307
BLAST of mRNA_P-wetherbeei_contig19046.1.1 vs. uniprot
Match: A0A2V6X8F3_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6X8F3_9BACT) HSP 1 Score: 61.6 bits (148), Expect = 1.690e-9 Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 19 DVSVEALAAAWVRLDTSVRAPRQPIELKKVQISVPERAVQIFEWLRRRSQGLFSQLVGAQRSRSYVVVTFLALLELVRRSRVRVSQENWQSDLVIE 306
D+SV+ LA A RL R R P ++ SV ER +I LR LFS +VG +R R+ +VVTFLALLELVR R R Q D+VIE
Sbjct: 64 DLSVDLLARALARLVAEQRR-RAPRAVEPEPPSVLERMAEIVSLLRSTWSLLFSTVVGPERERAELVVTFLALLELVRLGRARAQQTELFGDIVIE 158
BLAST of mRNA_P-wetherbeei_contig19046.1.1 vs. uniprot
Match: A0A2V7EFW9_9BACT (Segregation/condensation protein A n=2 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A2V7EFW9_9BACT) HSP 1 Score: 62.0 bits (149), Expect = 4.000e-9 Identity = 43/101 (42.57%), Postives = 59/101 (58.42%), Query Frame = 1
Query: 19 DVSVEALAAAWVRLDTSVRAPRQPIELKKVQISVPERAVQIFEWLRRRSQGLFSQLVGAQRSRSYVVVTFLALLELVRRSRVRVSQENWQSDLVIEIRQET 321
D+SV L A RL S +A R+P E++ +S+ ER +I LR LFS L G +R R +VVT LA+LELVR R+R Q D+VIE R+++
Sbjct: 150 DLSVHQLERALKRL-ISEQARRRPREVQPEPMSLLERMTEILAVLRDTWSLLFSSLTGGERRRPEIVVTLLAVLELVRLGRIRTQQTELFGDIVIERREDS 249
BLAST of mRNA_P-wetherbeei_contig19046.1.1 vs. uniprot
Match: A0A2V7E0T4_9BACT (Segregation/condensation protein A n=7 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A2V7E0T4_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 2.070e-8 Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query: 19 DVSVEALAAAWVRLDTSVRAPRQPIELKKVQISVPERAVQIFEWLRRRSQGLFSQLVGAQRSRSYVVVTFLALLELVRRSRVRVSQENWQSDLVIEIRQE 318
D+SV L A RL + +A R+P E++ +S+ ER +I LR LFS L G +R R +VVT LA+LELVR R+R Q D++IE R++
Sbjct: 151 DLSVHQLEKALKRL-INEQARRKPREVQPEPMSLLERMTEILTVLRDTWSLLFSSLTGGERRRPEIVVTMLAVLELVRLGRIRTQQTELFGDIIIERRED 249
BLAST of mRNA_P-wetherbeei_contig19046.1.1 vs. uniprot
Match: A0A2V6NUJ0_9BACT (Chromosome segregation protein ScpA n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6NUJ0_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 2.460e-8 Identity = 43/96 (44.79%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 19 DVSVEALAAAWVRLDTSVRAPRQPIELKKVQISVPERAVQIFEWLRRRSQGLFSQLVGAQRSRSYVVVTFLALLELVRRSRVRVSQENWQSDLVIE 306
D+SV L A R+ + R + P E++ SV ER +I LR LFS LVGA+R R+ +VVT LALLELVR R R Q D+VIE
Sbjct: 147 DLSVHLLGRAMTRVIEAQRR-QAPREIEPNPPSVLERMAEIVALLRSTWSLLFSALVGAERRRAELVVTLLALLELVRLGRARAQQTEMFGDIVIE 241
BLAST of mRNA_P-wetherbeei_contig19046.1.1 vs. uniprot
Match: A0A1Q7EDW4_9BACT (Uncharacterized protein n=2 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A1Q7EDW4_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 3.760e-8 Identity = 43/100 (43.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query: 19 DVSVEALAAAWVRLDTSVRAPRQPIELKKVQISVPERAVQIFEWLRRRSQGLFSQLVGAQRSRSYVVVTFLALLELVRRSRVRVSQENWQSDLVIEIRQE 318
D+S+ L A RL +A R+P E++ +S+ ER +I LR LFS L G +R RS VVVT LA+LELVR +R Q D+VIE R E
Sbjct: 149 DLSLHLLERALRRL-IDEQARRKPREIEPEPMSLLERMAEILAVLRDTWSLLFSSLTGTERVRSEVVVTLLAVLELVRLGNIRAQQSELFGDIVIERRAE 247
BLAST of mRNA_P-wetherbeei_contig19046.1.1 vs. uniprot
Match: A0A2V7F0M5_9BACT (Uncharacterized protein n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7F0M5_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 4.630e-8 Identity = 41/96 (42.71%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 19 DVSVEALAAAWVRLDTSVRAPRQPIELKKVQISVPERAVQIFEWLRRRSQGLFSQLVGAQRSRSYVVVTFLALLELVRRSRVRVSQENWQSDLVIE 306
D+SV+ LA A RL R R P ++ SV ER +I LR LFS L G +R RS +VVT LA+LELVR+ R++ Q ++VIE
Sbjct: 142 DLSVDWLARAMTRLIDEQRRAR-PRSVEPNPPSVIERMTEILSVLRDTWSLLFSSLTGGERKRSEIVVTLLAVLELVRQGRIKAQQTELFGEIVIE 236
BLAST of mRNA_P-wetherbeei_contig19046.1.1 vs. uniprot
Match: A0A0T6A567_9BACT (Chromosome segregation and condensation protein ScpA, segregation and condensation protein A n=2 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A0T6A567_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 8.930e-8 Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = 1
Query: 19 DVSVEALAAAWVRLDTSVRAPRQPIELKKVQISVPERAVQIFEWLRRRSQGLFSQLVGAQRSRSYVVVTFLALLELVRRSRVRVSQENWQSDLVIE 306
D+S+ L A+ RL R + P E++ +SV ER +I LR LFS +VG++R+RS +VVT LALLELVR + R Q ++VIE
Sbjct: 147 DLSIHLLERAFRRLLEEARG-QAPREVEPNPLSVLERMGEILSLLRHTWSLLFSSMVGSERARSELVVTLLALLELVRLGQARARQTELFGEIVIE 241 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19046.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19046.1.1 >prot_P-wetherbeei_contig19046.1.1 ID=prot_P-wetherbeei_contig19046.1.1|Name=mRNA_P-wetherbeei_contig19046.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=109bp PEWLELDVSVEALAAAWVRLDTSVRAPRQPIELKKVQISVPERAVQIFEWback to top mRNA from alignment at P-wetherbeei_contig19046:22..348+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19046.1.1 ID=mRNA_P-wetherbeei_contig19046.1.1|Name=mRNA_P-wetherbeei_contig19046.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig19046:22..348+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19046:22..348+ >mRNA_P-wetherbeei_contig19046.1.1 ID=mRNA_P-wetherbeei_contig19046.1.1|Name=mRNA_P-wetherbeei_contig19046.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig19046:22..348+ (Phaeothamnion wetherbeei SAG_119_79)back to top |