mRNA_P-wetherbeei_contig19043.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19043.2.1
Unique NamemRNA_P-wetherbeei_contig19043.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: W7WU39_9BURK (Nucleoid occlusion protein n=2 Tax=unclassified Methylibium TaxID=2633235 RepID=W7WU39_9BURK)

HSP 1 Score: 317 bits (811), Expect = 5.500e-106
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 1
Query:  235 MLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA 714
            MLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQA+VPSRWANRHP SFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA
Sbjct:    1 MLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAVVPSRWANRHPASFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA 160          
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: UPI001CEC4022 (ParB/RepB/Spo0J family partition protein n=1 Tax=Ideonella sp. B7 TaxID=2831643 RepID=UPI001CEC4022)

HSP 1 Score: 277 bits (709), Expect = 1.370e-89
Identity = 155/230 (67.39%), Postives = 169/230 (73.48%), Query Frame = 1
Query:   37 MSTKSKLLAMTENLLLPEDLPAAPEVQLA--APA--PTPTEGQPAGIAQQPPPKFPPVPTGGAPKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA 714
            MSTK+KLLAMT  L      PA P V  A  APA  P P EG        P  KFP +  G AP+TGPGQMLQFRGQMLA+EGEL K R  L+ HEGSTPTR +DP  I  SRWANRHPD+F+  EF  LKQDI  AGGNVQPI VR    Q GRYE+VFGHRRHRAC ELG+PVLA + TS +SD ELF+AMDRENRERADLSPYEQGTMYRRALD  LYPSNRR+AEA
Sbjct:    1 MSTKNKLLAMTMGLDPMAQAPAEPAVSRAPGAPAILPPPAEGS------LPAQKFPQLGPGSAPRTGPGQMLQFRGQMLAIEGELAKARSELQLHEGSTPTRLIDPALIDGSRWANRHPDAFNRPEFESLKQDIAHAGGNVQPILVRQAAGQEGRYEVVFGHRRHRACLELGVPVLAMVTTSPLSDAELFAAMDRENRERADLSPYEQGTMYRRALDAGLYPSNRRMAEA 224          
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A3S2TIQ8_9BURK (ParB/RepB/Spo0J family partition protein n=3 Tax=Burkholderiales genera incertae sedis TaxID=224471 RepID=A0A3S2TIQ8_9BURK)

HSP 1 Score: 273 bits (699), Expect = 5.490e-89
Identity = 134/160 (83.75%), Postives = 145/160 (90.62%), Query Frame = 1
Query:  235 MLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA 714
            MLQFRGQMLAVEGELGKLR+RLKEHEGS PTRKLDP  IVPSRWANRH DSF  A+F RLKQDIE+AGGNVQPI+VR L +Q GRYEIVFGHRRHRACSELG+PVLA ++T+  +DHELFSAMDRENRERADLSP+EQGTMYRRALD  LYPSNRRLAEA
Sbjct:    1 MLQFRGQMLAVEGELGKLRERLKEHEGSVPTRKLDPACIVPSRWANRHADSFGNADFLRLKQDIEVAGGNVQPIAVRPLPEQAGRYEIVFGHRRHRACSELGLPVLAMVETAPFTDHELFSAMDRENRERADLSPFEQGTMYRRALDAGLYPSNRRLAEA 160          
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A286HGC8_9BURK (Chromosome partitioning protein, ParB family n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A286HGC8_9BURK)

HSP 1 Score: 266 bits (681), Expect = 2.410e-85
Identity = 144/226 (63.72%), Postives = 167/226 (73.89%), Query Frame = 1
Query:   40 STKSKLLAMTENLLLPEDLPAA-PEVQLAAPAPTPTEGQPAGIAQQPPPKFPPVPTGG-APKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAE 711
            ST+ +L A+T  L +PE  PAA P     AP PT   G  A +      +FPP  T   AP+TGPGQML FRGQM AVEGEL  LR+RL +H+GSTPTRKLDP  I  SRWANRHP SF  AEFA LK D+E AGGNVQPI VR + D+PG+YE+VFGHRRHRAC ELGIPVLA I    + D ELF+AMDRENRERADLSPYEQG MY+RAL+E+L+P+ R+LAE
Sbjct:    3 STRKRLEALTAGLSIPEPAPAAAPASNSTAPVPTTLPGAAAAVET----RFPPAQTSQFAPRTGPGQMLAFRGQMQAVEGELTALRERLHQHDGSTPTRKLDPATIRASRWANRHPASFENAEFAGLKADVEQAGGNVQPILVRPVADEPGQYELVFGHRRHRACLELGIPVLAAIWLDELGDAELFAAMDRENRERADLSPYEQGVMYQRALEEQLFPTQRQLAE 224          
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A429WFS6_9BURK (ParB/RepB/Spo0J family partition protein n=1 Tax=Variovorax sp. MHTC-1 TaxID=2495593 RepID=A0A429WFS6_9BURK)

HSP 1 Score: 263 bits (673), Expect = 3.910e-84
Identity = 144/226 (63.72%), Postives = 165/226 (73.01%), Query Frame = 1
Query:   40 STKSKLLAMTENLLLPEDLPAA-PEVQLAAPAPTPTEGQPAGIAQQPPPKFPPVPTGG-APKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAE 711
            ST+ +L A+T  L +PE  PAA P     A  P    G  A +      +FPP   G  AP+TGPGQML FRGQM AVEGEL  LR+RL++H+GSTPTRKLDP+ I  SRWANRH DSF  AEFA LK DIE AGGNVQPI VR   DQPG YE+VFGHRRHRAC ELGIPVLA I    + D ELF+AMDRENRERADLSPYEQG MY+RAL+E+L+P+ R+LAE
Sbjct:    3 STRKRLEALTAGLSIPEPAPAAAPASNGTAAIPPALPGAAAAVET----RFPPAQAGQLAPRTGPGQMLAFRGQMQAVEGELAALRERLRQHDGSTPTRKLDPKTISASRWANRHRDSFENAEFAGLKADIEQAGGNVQPILVRPAADQPGHYELVFGHRRHRACLELGIPVLAAIWLDELGDAELFAAMDRENRERADLSPYEQGVMYQRALEEQLFPTQRQLAE 224          
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A840G0E0_9BURK (ParB family chromosome partitioning protein n=1 Tax=Variovorax guangxiensis TaxID=1775474 RepID=A0A840G0E0_9BURK)

HSP 1 Score: 263 bits (671), Expect = 8.070e-84
Identity = 142/227 (62.56%), Postives = 168/227 (74.01%), Query Frame = 1
Query:   40 STKSKLLAMTENLLLPEDLPAA--PEVQLAAPAPTPTEGQPAGIAQQPPPKFPPVPTGG-APKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAE 711
            ST+ +L A+T  L +PE +PAA  P   + AP   P    P  +      +FPP  TG  AP+TGPGQML FRGQM AVEGEL  +R+RL +++GSTPTRKLDP  I  SRWANRHP SF T+EFA LK DIE AGGNVQPI VR L D+PGRYE+VFGHRRHRAC +LGIPVLA I    + D ELF+AMDRENRER+DLS YEQG MY+RALDE+L+P+ R+LAE
Sbjct:    3 STRKRLEALTAGLSIPEPVPAAAAPVAHIPAPPVLPGVAAPPVVET----RFPPAQTGTIAPRTGPGQMLAFRGQMQAVEGELAAMRERLLQYDGSTPTRKLDPTMIRASRWANRHPTSFETSEFAALKADIEQAGGNVQPILVRALADEPGRYELVFGHRRHRACLDLGIPVLAAIWLDELGDIELFTAMDRENRERSDLSAYEQGVMYQRALDEQLFPTQRQLAE 225          
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A2P1VIW8_9BURK (Chromosome partitioning protein ParB n=3 Tax=Variovorax TaxID=34072 RepID=A0A2P1VIW8_9BURK)

HSP 1 Score: 259 bits (661), Expect = 2.620e-82
Identity = 139/226 (61.50%), Postives = 169/226 (74.78%), Query Frame = 1
Query:   40 STKSKLLAMTENLLLPEDLPAAPEVQLAA-PAPTPTEGQPAGIAQQPPPKFPPVPTGG-APKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAE 711
            ST+ +L A+T  L +PE +PAA  V ++  PAP    G    +A +   +FPP  TG  AP+TGPGQML FRG        L  LR+RL++H+GSTPTRK+DP  + PSRWANRHP SF +AEFA LK DIELAGGNVQPI VR L+D+PG+YE+VFGHRRHRAC ELGIPVLA I    + D ELF+AMDRENRERADLSPYEQG MY+RAL+E+L+P+ R+LAE
Sbjct:    3 STRKRLEALTAGLSIPEPVPAAAPVSVSTTPAPPALPGA-XXVALET--RFPPAQTGQPAPRTGPGQMLAFRGXXXXXXXXLAALRERLRQHDGSTPTRKIDPATVRPSRWANRHPASFESAEFAGLKADIELAGGNVQPILVRPLVDEPGQYELVFGHRRHRACLELGIPVLAAIWLDELGDAELFAAMDRENRERADLSPYEQGVMYQRALEEQLFPTQRQLAE 225          
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A5C1Q3V1_9BURK (ParB/RepB/Spo0J family partition protein n=2 Tax=Sphaerotilus natans TaxID=34103 RepID=A0A5C1Q3V1_9BURK)

HSP 1 Score: 255 bits (651), Expect = 1.100e-81
Identity = 126/160 (78.75%), Postives = 137/160 (85.62%), Query Frame = 1
Query:  235 MLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA 714
            MLQFRGQMLA E ELGKL++++K  EG+ PTRKLDP  I PSRWANRHPDSFS   F RLKQDIE AGGNVQPI VR   DQP RYEIVFGHRRHRACSELG+PVLA IDT+++SD ELFS MDRENRERADLSPYEQG+MYRRALD+ LY SNRRLAEA
Sbjct:    1 MLQFRGQMLATENELGKLKEQVKSFEGAAPTRKLDPHVIEPSRWANRHPDSFSNIAFLRLKQDIEQAGGNVQPILVRPRTDQPERYEIVFGHRRHRACSELGLPVLAMIDTTSISDQELFSVMDRENRERADLSPYEQGSMYRRALDQGLYVSNRRLAEA 160          
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: UPI0004768576 (ParB/RepB/Spo0J family partition protein n=3 Tax=Variovorax TaxID=34072 RepID=UPI0004768576)

HSP 1 Score: 257 bits (656), Expect = 1.490e-81
Identity = 145/229 (63.32%), Postives = 168/229 (73.36%), Query Frame = 1
Query:   40 STKSKLLAMTENLLLPEDLPAAPEVQLAAPAPTPTEGQPA--GIAQQPP--PKFPPVPTGG-APKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAE 711
            ST+ +L A+T  L +PE  PA+     AAPA  P    P   G A   P   +FPP  TG  AP+TGPGQML FRGQM AVE EL  LR+RL++H+GSTPTRKLDP+ I  SRWANRHP SF TA FA LK DIE AGGNVQPI VR L D+PG+YE+VFGHRRHRAC +LGIPVLA I    + D ELF+AMDRENRER DLS YEQG MY+RALDE+L+P+ R+LAE
Sbjct:    3 STRKRLEALTAGLSIPEPAPAS-----AAPA-APVAVAPVFPGAAASAPMETRFPPAQTGTMAPRTGPGQMLAFRGQMQAVEXELAALRERLQQHDGSTPTRKLDPKTIRASRWANRHPASFETAAFAALKADIEQAGGNVQPILVRALPDEPGQYELVFGHRRHRACLDLGIPVLAAIWVDELGDIELFTAMDRENRERTDLSAYEQGVMYQRALDEQLFPTQRQLAE 225          
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Match: A0A1H7YEC0_9BURK (Chromosome partitioning protein, ParB family n=2 Tax=Variovorax TaxID=34072 RepID=A0A1H7YEC0_9BURK)

HSP 1 Score: 255 bits (652), Expect = 6.160e-81
Identity = 141/226 (62.39%), Postives = 164/226 (72.57%), Query Frame = 1
Query:   40 STKSKLLAMTENLLLPEDLPAA-PEVQLAAPAPTPTEGQPAGIAQQPPPKFPPVPTGG-APKTGPGQMLQFRGQMLAVEGELGKLRDRLKEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQPISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSAMDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAE 711
            ST+ +L A+T  L +PE  PAA P        P    G  A  A +   +FPP  T   AP+TGPGQML FRGQM AVEGEL  LRDRL++H+GSTPTRKLDP  I  SRWANRH  SF TAEFA LK DIE AGGNVQPI VR +  +PG+YE+VFGHRRHRAC +LGIPVLA I    + D ELF+AMDRENRER+DLS YEQG MY+RALDE+L+P+ R+LAE
Sbjct:    3 STRKRLEALTAGLSIPEPTPAAAPTAHAIIAPPASLPGVAAAHAVET--RFPPAQTSSLAPRTGPGQMLAFRGQMQAVEGELAALRDRLRQHDGSTPTRKLDPAIIRASRWANRHSASFETAEFAGLKADIEQAGGNVQPILVRPVAGEPGQYELVFGHRRHRACLDLGIPVLAAIWLDELGDIELFTAMDRENRERSDLSAYEQGVMYQRALDEQLFPTQRQLAE 226          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19043.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7WU39_9BURK5.500e-10698.75Nucleoid occlusion protein n=2 Tax=unclassified Me... [more]
UPI001CEC40221.370e-8967.39ParB/RepB/Spo0J family partition protein n=1 Tax=I... [more]
A0A3S2TIQ8_9BURK5.490e-8983.75ParB/RepB/Spo0J family partition protein n=3 Tax=B... [more]
A0A286HGC8_9BURK2.410e-8563.72Chromosome partitioning protein, ParB family n=2 T... [more]
A0A429WFS6_9BURK3.910e-8463.72ParB/RepB/Spo0J family partition protein n=1 Tax=V... [more]
A0A840G0E0_9BURK8.070e-8462.56ParB family chromosome partitioning protein n=1 Ta... [more]
A0A2P1VIW8_9BURK2.620e-8261.50Chromosome partitioning protein ParB n=3 Tax=Vario... [more]
A0A5C1Q3V1_9BURK1.100e-8178.75ParB/RepB/Spo0J family partition protein n=2 Tax=S... [more]
UPI00047685761.490e-8163.32ParB/RepB/Spo0J family partition protein n=3 Tax=V... [more]
A0A1H7YEC0_9BURK6.160e-8162.39Chromosome partitioning protein, ParB family n=2 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19043contigP-wetherbeei_contig19043:597..1310 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1157708.KB907462_gene949
PFAMsParBc
Model size714
Max annot lvl28216|Betaproteobacteria
KEGG koko:K03497
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.61e-79
EggNOG OGsCOG1475@1|root,COG1475@2|Bacteria,1RHRH@1224|Proteobacteria,2VTHZ@28216|Betaproteobacteria,4AGWX@80864|Comamonadaceae
DescriptionParB-like nuclease domain
Cds size714
COG categoryK
BRITEko00000,ko03000,ko03036,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186162.4340734-CDS-P-wetherbeei_contig19043:596..13101683186162.4340734-CDS-P-wetherbeei_contig19043:596..1310Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19043 597..1310 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19043.2.1prot_P-wetherbeei_contig19043.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19043 597..1310 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19043.2.1

>prot_P-wetherbeei_contig19043.2.1 ID=prot_P-wetherbeei_contig19043.2.1|Name=mRNA_P-wetherbeei_contig19043.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=238bp
MATRLPQKKGAEMSTKSKLLAMTENLLLPEDLPAAPEVQLAAPAPTPTEG
QPAGIAQQPPPKFPPVPTGGAPKTGPGQMLQFRGQMLAVEGELGKLRDRL
KEHEGSTPTRKLDPQAIVPSRWANRHPDSFSTAEFARLKQDIELAGGNVQ
PISVRVLIDQPGRYEIVFGHRRHRACSELGIPVLATIDTSAVSDHELFSA
MDRENRERADLSPYEQGTMYRRALDEKLYPSNRRLAEA
back to top

mRNA from alignment at P-wetherbeei_contig19043:597..1310+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19043.2.1 ID=mRNA_P-wetherbeei_contig19043.2.1|Name=mRNA_P-wetherbeei_contig19043.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig19043:597..1310+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAACCAGGTTGCCACAAAAGAAGGGCGCTGAAATGAGTACGAAGTC GAAGCTCCTCGCGATGACGGAGAACTTGCTGCTGCCGGAGGATTTGCCAG CGGCTCCGGAGGTCCAACTAGCCGCTCCGGCCCCCACACCCACGGAGGGC CAGCCCGCCGGCATCGCGCAACAGCCTCCGCCAAAGTTTCCGCCGGTGCC GACAGGTGGCGCCCCCAAGACCGGGCCAGGCCAGATGCTGCAATTTCGCG GGCAGATGTTGGCGGTCGAGGGGGAGCTTGGGAAGCTTCGAGATCGTCTC AAAGAACACGAAGGCTCAACACCGACCCGCAAGCTCGATCCCCAAGCGAT CGTGCCCAGTCGCTGGGCGAACCGCCACCCAGACTCGTTCAGCACTGCGG AGTTCGCCAGACTGAAGCAAGACATCGAGCTCGCCGGCGGTAACGTCCAA CCTATCTCGGTGCGCGTGCTGATTGACCAGCCTGGCCGATACGAGATCGT CTTTGGGCATCGCCGTCACCGCGCGTGTAGCGAGCTGGGTATCCCAGTGC TGGCGACTATCGACACCAGTGCCGTGTCCGATCACGAGTTGTTCTCGGCG ATGGATCGCGAGAACCGAGAGCGTGCGGACCTGTCGCCGTATGAGCAGGG CACGATGTATCGCCGCGCACTTGACGAGAAGCTCTATCCGTCCAATCGGC GGCTGGCTGAAGCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig19043:597..1310+

>mRNA_P-wetherbeei_contig19043.2.1 ID=mRNA_P-wetherbeei_contig19043.2.1|Name=mRNA_P-wetherbeei_contig19043.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig19043:597..1310+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAACCAGGTTGCCACAAAAGAAGGGCGCTGAAATGAGTACGAAGTC
GAAGCTCCTCGCGATGACGGAGAACTTGCTGCTGCCGGAGGATTTGCCAG
CGGCTCCGGAGGTCCAACTAGCCGCTCCGGCCCCCACACCCACGGAGGGC
CAGCCCGCCGGCATCGCGCAACAGCCTCCGCCAAAGTTTCCGCCGGTGCC
GACAGGTGGCGCCCCCAAGACCGGGCCAGGCCAGATGCTGCAATTTCGCG
GGCAGATGTTGGCGGTCGAGGGGGAGCTTGGGAAGCTTCGAGATCGTCTC
AAAGAACACGAAGGCTCAACACCGACCCGCAAGCTCGATCCCCAAGCGAT
CGTGCCCAGTCGCTGGGCGAACCGCCACCCAGACTCGTTCAGCACTGCGG
AGTTCGCCAGACTGAAGCAAGACATCGAGCTCGCCGGCGGTAACGTCCAA
CCTATCTCGGTGCGCGTGCTGATTGACCAGCCTGGCCGATACGAGATCGT
CTTTGGGCATCGCCGTCACCGCGCGTGTAGCGAGCTGGGTATCCCAGTGC
TGGCGACTATCGACACCAGTGCCGTGTCCGATCACGAGTTGTTCTCGGCG
ATGGATCGCGAGAACCGAGAGCGTGCGGACCTGTCGCCGTATGAGCAGGG
CACGATGTATCGCCGCGCACTTGACGAGAAGCTCTATCCGTCCAATCGGC
GGCTGGCTGAAGCG
back to top