mRNA_P-wetherbeei_contig19000.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19000.1.1
Unique NamemRNA_P-wetherbeei_contig19000.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig19000.1.1 vs. uniprot
Match: A0A7S3Y1H4_HETAK (NEDD8-activating enzyme E1 regulatory subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1H4_HETAK)

HSP 1 Score: 101 bits (252), Expect = 2.630e-23
Identity = 47/83 (56.63%), Postives = 65/83 (78.31%), Query Frame = 1 
Query:    1 DGLTLWAETVAMLREWGLAAPAALSRKHAQEMARYGGAELHNVAAVVGGVASQEAVKLITKQYVPVNNTVVFNGVVGVIGIYE 249
            DG++LW E   +++ W    P  LS+KHA EM RYGGAELHN+AAV+GG+ASQEAVK+IT Q+ P+ NT+++NG+ G+ G+YE
Sbjct:  459 DGMSLWNEMQTLVKGWETEVPP-LSKKHATEMTRYGGAELHNIAAVIGGIASQEAVKIITHQFTPLKNTLIYNGIAGISGVYE 540
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BLAST of mRNA_P-wetherbeei_contig19000.1.1 vs. uniprot
Match: D7FZ86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ86_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 4.990e-20
Identity = 49/83 (59.04%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:    1 DGLTLWAETVAMLREWGLAAPAALSRKHAQEMARYGGAELHNVAAVVGGVASQEAVKLITKQYVPVNNTVVFNGVVGVIGIYE 249
            D   LW  T  +L   G+     LS KHAQE+ARYG +ELHNVA+VVGG+ SQEAVK IT+QY P++NT+V+NG+ GVIG YE
Sbjct:  212 DAAALWKITKELLGGMGVETEH-LSEKHAQEIARYGASELHNVASVVGGIGSQEAVKAITRQYTPLDNTLVYNGLAGVIGRYE 293
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BLAST of mRNA_P-wetherbeei_contig19000.1.1 vs. uniprot
Match: A0A6H5KYD4_9PHAE (NEDD8-activating enzyme E1 regulatory subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD4_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.470e-19
Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:    1 DGLTLWAETVAMLREWGLAAPAALSRKHAQEMARYGGAELHNVAAVVGGVASQEAVKLITKQYVPVNNTVVFNGVVGVIGIYE 249
            D   LW  T  +L   G+     LS KHAQE+ARYG +ELHNVA+V+GG+ SQEAVK IT+QY P++NT+V+NG+ GVIG YE
Sbjct:  446 DAAALWKITKELLAGMGVETEH-LSEKHAQEIARYGASELHNVASVLGGIGSQEAVKAITRQYTPLDNTLVYNGLAGVIGRYE 527
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BLAST of mRNA_P-wetherbeei_contig19000.1.1 vs. uniprot
Match: A0A7S2E762_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E762_TRICV)

HSP 1 Score: 85.5 bits (210), Expect = 1.370e-17
Identity = 41/59 (69.49%), Postives = 51/59 (86.44%), Query Frame = 1 
Query:   76 RKHAQEMARYGGAELHNVAAVVGGVASQEAVKLITKQYVPVNNTVVFNGVVGVIGIYEF 252
            RKHA+E+ RY  AE+HNVAAVVGGVASQEAVKLIT QYVP+++T V+NG+ G+ G+Y F
Sbjct:  446 RKHAREVVRYNNAEIHNVAAVVGGVASQEAVKLITGQYVPLDDTYVYNGIAGIAGVYRF 504
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BLAST of mRNA_P-wetherbeei_contig19000.1.1 vs. uniprot
Match: A0A836CIV0_9STRA (NEDD8-activating enzyme E1 regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIV0_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 4.930e-17
Identity = 42/83 (50.60%), Postives = 62/83 (74.70%), Query Frame = 1 
Query:    1 DGLTLWAETVAMLREWGLAAPAALSRKHAQEMARYGGAELHNVAAVVGGVASQEAVKLITKQYVPVNNTVVFNGVVGVIGIYE 249
            D   +WAE  A+++E G+     L   HA+E+ R G +E+H VA+VVGG+ASQEAVK++T+QY P++NT V+NGV GV+G+Y+
Sbjct:  452 DNQAVWAELQALVKELGVG-KGPLGLAHAREVVRAGASEVHCVASVVGGIASQEAVKVVTRQYAPLDNTAVYNGVAGVLGVYK 533
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BLAST of mRNA_P-wetherbeei_contig19000.1.1 vs. uniprot
Match: A0A7S2RZR1_9STRA (NEDD8-activating enzyme E1 regulatory subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZR1_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.730e-16
Identity = 40/77 (51.95%), Postives = 58/77 (75.32%), Query Frame = 1 
Query:    1 DGLTLWAETVAMLREWGLAAPAALSRKHAQEMARYGGAELHNVAAVVGGVASQEAVKLITKQYVPVNNTVVFNGVVG 231
            D  ++W     +L++ G+     LS+ +A+E+ RYGGAELHN+AAV+GG+ASQE +K++T Q+VP NNTVVFNG+ G
Sbjct:  468 DAESVWGHMQLVLQQAGVEDLEHLSKDYAREVTRYGGAELHNIAAVIGGMASQEVIKVLTHQWVPANNTVVFNGIAG 544
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BLAST of mRNA_P-wetherbeei_contig19000.1.1 vs. uniprot
Match: A0A7R9ZSY4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSY4_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 6.340e-16
Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 1 
Query:   79 KHAQEMARYGGAELHNVAAVVGGVASQEAVKLITKQYVPVNNTVVFNGVVGVIGIYEF 252
            K A E  RY  AE+HN+A+VVGGVASQEAVKLIT QYVP++NT +FNG+V V G+Y F
Sbjct:  172 KMAHEFTRYANAEIHNIASVVGGVASQEAVKLITGQYVPLDNTYIFNGIVSVGGVYRF 229
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BLAST of mRNA_P-wetherbeei_contig19000.1.1 vs. uniprot
Match: A0A7S2U6W5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6W5_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 7.490e-16
Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 1 
Query:   76 RKHAQEMARYGGAELHNVAAVVGGVASQEAVKLITKQYVPVNNTVVFNGVVGVIGIYEF 252
            + HA EM RY  A++HNVA+++GGVASQEAVKLIT QY+P+NNT V+NG+ G   +Y F
Sbjct:  125 KPHAAEMVRYHNAQVHNVASIIGGVASQEAVKLITCQYIPLNNTHVYNGIAGTAAVYRF 183
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BLAST of mRNA_P-wetherbeei_contig19000.1.1 vs. uniprot
Match: A0A7S1C431_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C431_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.870e-15
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 1 
Query:   82 HAQEMARYGGAELHNVAAVVGGVASQEAVKLITKQYVPVNNTVVFNGVVGVIGIYE 249
            HA E+ARYGGAE HNVAAV+GGVASQEAVKLIT QY P++NT +FNG+ G   +Y 
Sbjct:  234 HAAEIARYGGAEPHNVAAVLGGVASQEAVKLITHQYEPLDNTFIFNGITGESAVYR 289
[Close]
BLAST of mRNA_P-wetherbeei_contig19000.1.1 vs. uniprot
Match: A0A4D9CZZ8_9STRA (ThiF domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZZ8_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.970e-15
Identity = 34/60 (56.67%), Postives = 50/60 (83.33%), Query Frame = 1 
Query:   70 LSRKHAQEMARYGGAELHNVAAVVGGVASQEAVKLITKQYVPVNNTVVFNGVVGVIGIYE 249
            +S KHA E+ARYG  ELHN+AA++GG+ +QEAVK++T+QYVPV+NT ++NG+  + G+Y 
Sbjct:  181 VSPKHAAEIARYGATELHNIAAIMGGIGAQEAVKILTQQYVPVDNTFLYNGIASMGGVYR 240
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19000.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y1H4_HETAK2.630e-2356.63NEDD8-activating enzyme E1 regulatory subunit n=1 ... [more]
D7FZ86_ECTSI4.990e-2059.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYD4_9PHAE4.470e-1957.83NEDD8-activating enzyme E1 regulatory subunit n=1 ... [more]
A0A7S2E762_TRICV1.370e-1769.49Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A836CIV0_9STRA4.930e-1750.60NEDD8-activating enzyme E1 regulatory subunit n=1 ... [more]
A0A7S2RZR1_9STRA1.730e-1651.95NEDD8-activating enzyme E1 regulatory subunit n=1 ... [more]
A0A7R9ZSY4_9STRA6.340e-1667.24Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2U6W5_9STRA7.490e-1661.02Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1C431_9STRA2.870e-1569.64Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A4D9CZZ8_9STRA2.970e-1556.67ThiF domain-containing protein n=1 Tax=Nannochloro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19000contigP-wetherbeei_contig19000:1046..1300 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FZ86
Preferred nameNAE1
PFAMsThiF
Model size255
Max annot lvl2759|Eukaryota
KEGG koko:K04532
KEGG Pathwayko05010,map05010
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000076,GO:0000278,GO:0000280,GO:0001101,GO:0001540,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006464,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007093,GO:0007127,GO:0007131,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0008150,GO:0008152,GO:0008219,GO:0008641,GO:0009414,GO:0009415,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009733,GO:0009734,GO:0009735,GO:0009755,GO:0009791,GO:0009965,GO:0009966,GO:0009968,GO:0009987,GO:0010016,GO:0010033,GO:0010035,GO:0010252,GO:0010389,GO:0010564,GO:0010646,GO:0010648,GO:0010941,GO:0010948,GO:0010972,GO:0012501,GO:0016043,GO:0016874,GO:0016877,GO:0019538,GO:0019781,GO:0019899,GO:0022402,GO:0022414,GO:0023051,GO:0023052,GO:0023057,GO:0031570,GO:0031625,GO:0032446,GO:0032501,GO:0032502,GO:0032870,GO:0032991,GO:0033218,GO:0033314,GO:0033554,GO:0034641,GO:0035825,GO:0036211,GO:0042221,GO:0042277,GO:0042579,GO:0042592,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043516,GO:0043518,GO:0043523,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044424,GO:0044444,GO:0044464,GO:0044774,GO:0044818,GO:0045116,GO:0045786,GO:0045930,GO:0046483,GO:0046982,GO:0046983,GO:0048285,GO:0048366,GO:0048367,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048827,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051321,GO:0051402,GO:0051716,GO:0051726,GO:0061982,GO:0065007,GO:0065008,GO:0070647,GO:0070887,GO:0070997,GO:0071310,GO:0071365,GO:0071495,GO:0071704,GO:0071840,GO:0080134,GO:0080135,GO:0090304,GO:0099402,GO:0140013,GO:1901214,GO:1901360,GO:1901564,GO:1901700,GO:1901796,GO:1901797,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902531,GO:1902532,GO:1902749,GO:1902750,GO:1903046,GO:1903047,GO:1905392,GO:2001020,GO:2001021
Exons1
Evalue8.19e-21
EggNOG OGsCOG0476@1|root,KOG2016@2759|Eukaryota
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-06_008910.1
DescriptionNEDD8 activating enzyme activity
Cds size255
COG categoryH
BRITEko00000,ko00001,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186161.507694-CDS-P-wetherbeei_contig19000:1045..13001683186161.507694-CDS-P-wetherbeei_contig19000:1045..1300Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19000 1046..1300 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19000.1.1prot_P-wetherbeei_contig19000.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19000 1046..1300 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19000.1.1

>prot_P-wetherbeei_contig19000.1.1 ID=prot_P-wetherbeei_contig19000.1.1|Name=mRNA_P-wetherbeei_contig19000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=85bp
DGLTLWAETVAMLREWGLAAPAALSRKHAQEMARYGGAELHNVAAVVGGV
ASQEAVKLITKQYVPVNNTVVFNGVVGVIGIYEF*
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mRNA from alignment at P-wetherbeei_contig19000:1046..1300-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19000.1.1 ID=mRNA_P-wetherbeei_contig19000.1.1|Name=mRNA_P-wetherbeei_contig19000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig19000:1046..1300- (Phaeothamnion wetherbeei SAG_119_79)
GACGGCTTGACGCTCTGGGCGGAGACGGTGGCCATGCTGCGGGAGTGGGG
GCTGGCGGCGCCGGCGGCGCTGTCGAGAAAGCACGCGCAGGAGATGGCGC
GTTACGGCGGAGCCGAGCTGCACAATGTGGCGGCGGTGGTCGGCGGCGTG
GCCAGTCAGGAGGCCGTCAAGCTCATCACGAAGCAGTACGTGCCCGTCAA
CAACACAGTGGTGTTCAACGGCGTCGTCGGCGTCATCGGAATCTACGAGT
TTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19000:1046..1300-

>mRNA_P-wetherbeei_contig19000.1.1 ID=mRNA_P-wetherbeei_contig19000.1.1|Name=mRNA_P-wetherbeei_contig19000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig19000:1046..1300- (Phaeothamnion wetherbeei SAG_119_79)
GACGGCTTGACGCTCTGGGCGGAGACGGTGGCCATGCTGCGGGAGTGGGG
GCTGGCGGCGCCGGCGGCGCTGTCGAGAAAGCACGCGCAGGAGATGGCGC
GTTACGGCGGAGCCGAGCTGCACAATGTGGCGGCGGTGGTCGGCGGCGTG
GCCAGTCAGGAGGCCGTCAAGCTCATCACGAAGCAGTACGTGCCCGTCAA
CAACACAGTGGTGTTCAACGGCGTCGTCGGCGTCATCGGAATCTACGAGT
TTTGA
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