mRNA_P-wetherbeei_contig1897.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1897.3.2
Unique NamemRNA_P-wetherbeei_contig1897.3.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1897.3.2 vs. uniprot
Match: A0A835YQF6_9STRA (PLC-like phosphodiesterase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF6_9STRA)

HSP 1 Score: 213 bits (543), Expect = 9.200e-60
Identity = 136/333 (40.84%), Postives = 187/333 (56.16%), Query Frame = 3
Query:  258 AILLYLKMPDILSWRAVSQVR-----------RAAFLDNKHLIKHHQRLILDLYSSLLHLQAVCGLSVDRDDDDAPAAGRGPWARPPRLAAHVPEPGRVWAVAHRGSSAAFEGNSFPAFWEALVVGADMIELDVALCRTGHVVVHHDTVVEHTGDALRMLGLDKVRQLI--PHVVTLDQVLACPRLRNSEMRVYFDIKGDHVVRPLMHLLHAAVTNGRWDPARLLVASFDSFHLLEVDAFRRAFPEMSGVGTAVIIDATPLSLAREPAALGCSWISVGRDQCHPRFVADAHRRGLCVMVWTVNKGADAAELLAAPLEERVDGIISDYPEVIIA 1217
            A LLYL    +L W AVS+                F    H  +H QRL+L+L+ S  HL  V  L+        PA     WA      A  P+  RV  + H+G+    +GN+  +F  A+ +G DMIE DV  C  G ++ HHD + E +G   + + + KVR L+  PH  TLD++LA  RLR+S + +YFD+K  ++VRP M  + AAVT G W  +R +VA+F    LLE++AFR+A PE+ G+ TA I+DA PLSLAR+  ALGC  +SVG+    P FVAD HRRGL +  WTVN  +   EL        +DGI +DYPE++ A
Sbjct:    8 ACLLYLDTRSLLRWAAVSRGSFSTGSSSNRNFNGIFASQGHAQRHIQRLLLELHHSKDHLHHVSQLAGHSIKPAPPA-----WATAAGATATPPK--RVLNIGHKGAEGHVKGNTLDSFHRAVELGVDMIEFDVVACADG-ILCHHDPLHEASGKWYQDMTIAKVRSLLGRPHP-TLDEMLADRRLRDSGVHLYFDLKHTNIVRPTMRSIVAAVTRGGWHASRFVVATFKQVELLEINAFRQAIPELRGLRTAAILDAIPLSLARDFEALGCCAVSVGQYCVCPEFVADCHRRGLEMWAWTVNHKSMVDELFRLG----IDGICTDYPELVHA 327          
BLAST of mRNA_P-wetherbeei_contig1897.3.2 vs. uniprot
Match: A0A4D9D615_9STRA (GP-PDE domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D615_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.130e-54
Identity = 138/341 (40.47%), Postives = 193/341 (56.60%), Query Frame = 3
Query:  345 HLIKHH---------QRLILDLYSSLLHLQA---VCGL----SVDRDDDDA--------------PAAGRGP---WARPPRLAAHVPEPGRVWAVAHRGSSAAFEGNSFPAFWEALVVGADMIELDVALCRTGHVVVHHDTVVEHTGDALRMLGLDKVRQLIPHVVTLDQVLACPRLRNSEMRVYFDIKGDHVVRPLMHLLHAAVTNGRWDPARLLVASFDSFHLLEVDAFRRAFPE-MSGVGTAVIIDATPLSLAREPAALGCSWISVGRDQCHPRFVADAHRRGLCVMVWTVNKGADAAELLAAPLEERVDGIISDYPEVIIAQRTAREELEQGQRNAA 1265
            HL++ H         +RL ++L++S L L+    VCG     S D D+DD               P+  RG    +  PPRL   VP P    +V HRG+S   +GNS  +F  A+ +GADMIELDV L R+G V+VHHD  +   G  L  L L +++++ P V  L +VLA   LR S + +Y DIK D VV PLM LLH A+    W P+RLLVASF+ + ++EV+A R A+P  ++ + T +I+D  P+S A+E AALG  W S+G     P F+ DAHRRG+ VMVWTVN     A  +    +  VD +++D+PE  +A R   EE  +  +NAA
Sbjct:   65 HLVRFHAENIWEPVSKRLTVELHASRLRLETASDVCGPPQPPSADGDEDDTDVGEDTDLAGWTHDPSRFRGHPHLFQTPPRL---VPRP---LSVGHRGASGHVKGNSLASFQRAVALGADMIELDVCLDRSGEVIVHHDRYLPD-GRLLENLALAQIKRVDPAVEPLSRVLA--DLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNN----ASAMRRYADLGVDALVTDFPERFVAVRQEGEEALRVAQNAA 392          
BLAST of mRNA_P-wetherbeei_contig1897.3.2 vs. uniprot
Match: W7T4I9_9STRA (Glycerophosphoryl diester phosphodiesterase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4I9_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.200e-39
Identity = 85/174 (48.85%), Postives = 114/174 (65.52%), Query Frame = 3
Query:  609 MIELDVALCRTGHVVVHHDTVVEHTGDALRMLGLDKVRQLIPHVVTLDQVLACPRLRNSEMRVYFDIKGDHVVRPLMHLLHAAVTNGRWDPARLLVASFDSFHLLEVDAFRRAFPE-MSGVGTAVIIDATPLSLAREPAALGCSWISVGRDQCHPRFVADAHRRGLCVMVWTVN 1127
            MIELDV L R+G V+VHHD  +   G  L  L L +++++ P V  L +VLA   LR S + +Y DIK D VV PLM LLH A+    W P+RLLVASF+ + ++EV+A R A+P  ++ + T +I+D  P+S A+E AALG  W S+G     P F+ DAHRRG+ VMVWTVN
Sbjct:    1 MIELDVCLDRSGEVIVHHDRYLPD-GRLLENLALAQIKRVDPAVEPLARVLA--DLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVN 171          
BLAST of mRNA_P-wetherbeei_contig1897.3.2 vs. uniprot
Match: A0A6V1WIB7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WIB7_HETAK)

HSP 1 Score: 159 bits (401), Expect = 1.750e-38
Identity = 88/225 (39.11%), Postives = 130/225 (57.78%), Query Frame = 3
Query:  528 VAHRGSSAAFEGNSFPAFWEALVVGADMIELDVALCRTGHVVVHHDTVVEHTGDALRMLGLDKVRQLIPHVVTLDQVLACPRLRNSEMRVYFDIKGDHVVRPLMHLLHAAVTNGRWDPARLLVASFDSFHLLEVDAFRRAFPEMSGVGTAVIIDATPLSLAREPAALGCSWISVGRDQCHPRFVADAHRRGLCVMVWTVNKGADAAELLAAPLEERVDGIISDYP 1202
            + H+G S+ F GN+ PAF E++ +GA+MIELD+ L R  ++++HHD              + ++R+  P + TL + L    LR S++R+YFD+K   +V PL+ LL  AV   +W+ +R L+ASFD + LL+V+AF+ A        T VI+DA PL  A     L  ++IS+ + +  P FV DAHRRG+ V  WTVN       L  A +   VDGI +D P
Sbjct:   96 ICHKGCSSKFHGNTMPAFKESVRIGAEMIELDLILTRDRNIIIHHDQTTPDGEGLCFETPMSEIRRKFPEIPTLREFLENDMLRKSDIRIYFDLKCQDIVEPLLELLMEAVHRLQWEASRFLIASFDQYDLLDVNAFKSAHDV--DFQTIVIVDAMPLGYAACFEELEVAYISIAQGRLIPAFVQDAHRRGMGVFAWTVNDPV----LWRAFVRMGVDGICTDRP 314          
BLAST of mRNA_P-wetherbeei_contig1897.3.2 vs. uniprot
Match: A0A7C3Y2P9_9DELT (Glycerophosphodiester phosphodiesterase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3Y2P9_9DELT)

HSP 1 Score: 100 bits (248), Expect = 3.840e-20
Identity = 72/233 (30.90%), Postives = 112/233 (48.07%), Query Frame = 3
Query:  528 VAHRGSSAAFEGNSFPAFWEALVVGADMIELDVALCRTGHVVVHHDTVVEHTGDA---LRMLGLDKVRQLIPH----VVTLDQVLACPRLRNSEMRVYFDIKGDHVVRPLMHLLHAAVTNGRWDPARLLVASFDSFHLLEVDAFRRAFPEMSGVGTAVIIDATPLSLAREPAALGCSWISVGRDQCHPRFVADAHRRGLCVMVWTVNKGADAAELLAAPLEERVDGIISDYPE 1205
            + HRG+      N+  +F +AL +GAD +ELDV LCR+G +VV HD  V+ T D    +  + L++++ L       + TLD+VL      +    +  ++K +        LL   +  GRW     LV SFD + L     F R  PE   V    ++ A PL   R    +G  ++    +      V DAH RG+ V+ WTV    D  E +A  ++  VDG+I ++P+
Sbjct:    4 IGHRGAMGYAPENTLASFAKALELGADGVELDVRLCRSGELVVIHDRRVDRTTDGSGWVAEMTLEELKALRVKGGEGIPTLDEVLD---FLDHRALIDIELKEEGTAEAAARLLEKRIQGGRWQAEDFLVTSFDHYELFR---FHRFLPE---VPFGPLVVAKPLGYGRMAQEMGAPYLLPYFEFVDRPLVEDAHARGVKVLTWTV----DGEEDIARMMDLGVDGLIGNFPD 223          
BLAST of mRNA_P-wetherbeei_contig1897.3.2 vs. uniprot
Match: A0A7J4J444_9ARCH (Glycerophosphodiester phosphodiesterase n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A7J4J444_9ARCH)

HSP 1 Score: 93.6 bits (231), Expect = 6.690e-18
Identity = 70/235 (29.79%), Postives = 119/235 (50.64%), Query Frame = 3
Query:  528 VAHRGSSAAFEGNSFPAFWEALVVGADMIELDVALCRTGHVVVHHDTVVEHTGDA---LRMLGLDKVRQLIP----HVVTLDQVLACPRLRNSEMRVYFDIKGDHVVRPLMHLLHAAVTNGRWDPARLLVASFDSFHLLEVDAFRRAFPEMSGVGTAVIIDATPLSLAREPAALGCSWISVGRDQCHPRFVADAHRRGLCVMVWTVNKGADAAELLAAPLEERVDGIISDYPEVI 1211
            +AHRG+SA    N+  AF +A+ + ADMIELDV LC+TG V+V HD  +  T +    ++   L +++ L       + TL + L C    N   +V  +IK    V P++ ++   V    W+    L++SF    L  V    R       VG  ++ +  PL   ++  A+    + +   + + + +  AH++ + V+ WTVN+  + A++     E +VDGIIS+YP+ I
Sbjct:    5 IAHRGASAYEPENTLRAFQKAIELNADMIELDVHLCKTGEVIVIHDPTLRRTTNGKGFIKKKTLAEIKSLHSLRNEPIPTLPETLDCI---NRRAKVNIEIKNKKAVIPVLKIIDEYVLGKGWEYEDFLISSFLYPALQHV----RKLNTHLKVG--ILWNRVPLLWLKKVQAIHAYSLHLPHRKINAKLILKAHQQNIKVIAWTVNRPKNIAKMK----ELKVDGIISNYPDKI 226          
BLAST of mRNA_P-wetherbeei_contig1897.3.2 vs. uniprot
Match: F7NY47_9GAMM (Glycerophosphoryl diester phosphodiesterase n=1 Tax=Rheinheimera sp. A13L TaxID=506534 RepID=F7NY47_9GAMM)

HSP 1 Score: 93.6 bits (231), Expect = 6.840e-18
Identity = 76/233 (32.62%), Postives = 120/233 (51.50%), Query Frame = 3
Query:  528 VAHRGSSAAFEGNSFPAFWEALVVGADMIELDVALCRTGHVVVHHDTVVEHTGDALRMLG---LDKVRQLIP----HVVTLDQVLACPRLRNSEMRVYFDIKGDHVVRPLMHLLHAAVTNGRWDPARLLVASFDSFHLLEVDAFRRAFPEMSGVGTAVIIDATPLSLAREPAALGCSWISVGRDQCHPRFVADAHRRGLCVMVWTVNKGADAAELLAAPLEERVDGIISDYPE 1205
            +AHRG+S ++  N+  A  +AL+  AD IE+DV  C    +VV HD  V  T +    L    L +++QL       V TL QVL   +L N++  +  ++KG      L+ L+  A T    +P +LL++SF+   L  +   R   P++    T  +  + PL  A   + LG   ++  +D    + VADAH+RGL V+V+TVN    AA++     +  VDGI  +YP+
Sbjct:    4 IAHRGASGSYPENTLLAIEQALLAKADGIEIDV-FCVENTLVVIHDQNVSRTTNGTGFLSDFTLKQLQQLDAGSGQQVPTLWQVL---QLVNNQTLLNIELKGADTAEALLQLIEKAETELGTEPDKLLISSFNHPLLKYIKTQR---PDLK---TGALTASLPLDYAAFASELGAWSVNCDKDFIDQQMVADAHQRGLKVLVYTVNDAVTAAKMQ----QLGVDGIFCNYPQ 222          
BLAST of mRNA_P-wetherbeei_contig1897.3.2 vs. uniprot
Match: UPI0019F4CC8D (Glycerophosphodiester phosphodiesterase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F4CC8D)

HSP 1 Score: 92.4 bits (228), Expect = 1.750e-17
Identity = 71/233 (30.47%), Postives = 109/233 (46.78%), Query Frame = 3
Query:  528 VAHRGSSAAFEGNSFPAFWEALVVGADMIELDVALCRTGHVVVHHDTVVEHTGDALRMLGLDKVRQLIP-------HVVTLDQVLACPRLRNSEMRVYFDIKGDHVVRPLMHLLHAAVTNGRWDPARLLVASFDSFHLLEVDAFRRAFPEMSGVGTAVIIDATPLSLAREPAALGCSWISVGRDQCHPRFVADAHRRGLCVMVWTVNKGADAAELLAAPLEERVDGIISDYPE 1205
            + HRG+      NS  +F +AL +  DMIELDV LCR+G +VV HD+ V+ T D +  +    + QL          +  L +VL    L ++ + V  ++KG     P+  L+   +  G WD    L++SF    L++    R   P ++       +    +  AR   +LG   I         + V + HR+G+ V VWTVN+  D    +A   E  VDG  SDYP+
Sbjct:    8 IGHRGACGYEPENSLRSFKKALTLKVDMIELDVQLCRSGELVVIHDSKVDRTTDGIGSVAKKSLEQLKKLDAGKGGSIPLLPEVLD---LVDNRIIVNIELKGKRTAEPVSVLIKKYLHKG-WDKDNFLLSSFSREELIDA---RENSPNLNIGVNITSLKKDTMQFAR---SLGACSIHPSLQITTKKLVDEIHRQGMKVFVWTVNEEKD----IARTKEINVDGCFSDYPD 226          
BLAST of mRNA_P-wetherbeei_contig1897.3.2 vs. uniprot
Match: A0A850AM73_9BACT (Glycerophosphodiester phosphodiesterase n=1 Tax=Calditrichaceae bacterium TaxID=2614252 RepID=A0A850AM73_9BACT)

HSP 1 Score: 89.0 bits (219), Expect = 3.160e-16
Identity = 75/237 (31.65%), Postives = 113/237 (47.68%), Query Frame = 3
Query:  534 HRGSSAAFEGNSFPAFWEALVVGADMIELDVALCRTGHVVVHHDTVVEHTGDALRMLG---LDKVRQL-------IPHV-VTLDQVLACPRLRNSEMRVYFDIKGDHVVRPLMHLLHAAVTNGRWDPARLLVASFDSFHLLEVDAFRRAFPEMSGVGTAVIIDATPLSLAREPAALGCSWISVGRDQCHPRFVADAHRRGLCVMVWTVNKGADAAELLAAPLEERVDGIISDYPEVI 1211
            HRG++     N+  A  +A+ +GAD +E+DV     G ++V HD  +E T + +  +    L+ +R L       IP +    +QV       N    V  ++KG     P+  L+   V    W     LV+SFD     E+ A +   P++    T  +I A PL  AR   AL    +  G +     FV DAHRRGL V V+TVN+  D A ++A      VDG+ +DYPE++
Sbjct:    9 HRGAAGHAPENTLAAVEKAISLGADWVEVDVYAVE-GELLVIHDDRLERTTNGVGYVAEQSLEYLRSLDAGNGEKIPFLWEVFEQV-------NRRTGVNVELKGPGTAAPVALLIDRWVKERGWRYEEFLVSSFDHH---ELRAIKHLQPKLR---TGALILALPLEYARFAEALNAYSVHPGVEFLDRAFVEDAHRRGLKVFVYTVNRRQDLARVIALG----VDGVFTDYPEIV 227          
BLAST of mRNA_P-wetherbeei_contig1897.3.2 vs. uniprot
Match: A0A1Y1T850_9FLAO (Glycerophosphoryl diester phosphodiesterase n=2 Tax=Zunongwangia TaxID=417127 RepID=A0A1Y1T850_9FLAO)

HSP 1 Score: 86.3 bits (212), Expect = 1.990e-15
Identity = 69/239 (28.87%), Postives = 119/239 (49.79%), Query Frame = 3
Query:  528 VAHRGSSAAFEGNSFPAFWEALVVGADMIELDVALCRTGHVVVHHDTVVEHTGDALRMLG---LDKVRQLIP----HVVTLDQVLACPRLRNSEMRVYFDIKGDHVVRPLMHLLHAAVTNGRWDPARLLVASFDSFHLLEVDAFRRAFPEMSGVGTAVIIDATPLSLA------REPAALGCSWISVGRDQCHPRFVADAHRRGLCVMVWTVNKGADAAELLAAPLEERVDGIISDYPE 1205
            + HRG+      N+  +  +AL++  DMIE+DV LC+TG +VV HD  +E T     M+G   L +++ L       + TL++VL    L   ++ +  ++KG+    P++  L       ++  +R+L++SF+   L+ + +     P       AV+ D   LS+A       +  A+   +  V RD     ++AD HR G+ + VWTVNK     ++ A      VDGI +D+P+
Sbjct:    6 IGHRGAKGHVAENTLESIKKALLLRVDMIEIDVHLCKTGELVVIHDEELETTTSGTGMVGNKSLSEIKSLKTKEGYRIPTLEEVL---ELIQDKVILNIELKGEGTAEPVLKCLQ------KYPGSRILISSFNFNELMSLRSLNPEIP------VAVLTD-DDLSIAFLQARHLKAVAIHPYYKLVTRD-----YLADCHRNGIKINVWTVNKPEKIKKMKALG----VDGIFTDFPD 219          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1897.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQF6_9STRA9.200e-6040.84PLC-like phosphodiesterase (Fragment) n=1 Tax=Trib... [more]
A0A4D9D615_9STRA1.130e-5440.47GP-PDE domain-containing protein n=1 Tax=Nannochlo... [more]
W7T4I9_9STRA1.200e-3948.85Glycerophosphoryl diester phosphodiesterase n=1 Ta... [more]
A0A6V1WIB7_HETAK1.750e-3839.11Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7C3Y2P9_9DELT3.840e-2030.90Glycerophosphodiester phosphodiesterase n=1 Tax=De... [more]
A0A7J4J444_9ARCH6.690e-1829.79Glycerophosphodiester phosphodiesterase n=1 Tax=Ca... [more]
F7NY47_9GAMM6.840e-1832.62Glycerophosphoryl diester phosphodiesterase n=1 Ta... [more]
UPI0019F4CC8D1.750e-1730.47Glycerophosphodiester phosphodiesterase n=1 Tax=Pr... [more]
A0A850AM73_9BACT3.160e-1631.65Glycerophosphodiester phosphodiesterase n=1 Tax=Ca... [more]
A0A1Y1T850_9FLAO1.990e-1528.87Glycerophosphoryl diester phosphodiesterase n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1897contigP-wetherbeei_contig1897:2088..5140 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog620914.JH621257_gene1290
PFAMsGDPD
Model size1990
Max annot lvl976|Bacteroidetes
KEGG rclassRC00017,RC00425
KEGG koko:K01126
KEGG ReactionR01030,R01470
KEGG Pathwayko00564,map00564
Hectar predicted targeting categoryother localisation
Exons5
Evalue4.64e-17
EggNOG OGsCOG0584@1|root,COG0584@2|Bacteria,4NGNU@976|Bacteroidetes,1HYHS@117743|Flavobacteriia,2YGMC@290174|Aquimarina
EC3.1.4.46
DescriptionGlycerophosphoryl diester phosphodiesterase family
Cds size1716
COG categoryC
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1897.3.2prot_P-wetherbeei_contig1897.3.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1897 2273..5051 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186160.287255-UTR-P-wetherbeei_contig1897:2087..22721683186160.287255-UTR-P-wetherbeei_contig1897:2087..2272Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1897 2088..2272 +
1683186160.358753-UTR-P-wetherbeei_contig1897:5051..51401683186160.358753-UTR-P-wetherbeei_contig1897:5051..5140Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1897 5052..5140 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186160.2976885-CDS-P-wetherbeei_contig1897:2272..24011683186160.2976885-CDS-P-wetherbeei_contig1897:2272..2401Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1897 2273..2401 +
1683186160.3069208-CDS-P-wetherbeei_contig1897:2670..30091683186160.3069208-CDS-P-wetherbeei_contig1897:2670..3009Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1897 2671..3009 +
1683186160.3194737-CDS-P-wetherbeei_contig1897:3276..33781683186160.3194737-CDS-P-wetherbeei_contig1897:3276..3378Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1897 3277..3378 +
1683186160.3381007-CDS-P-wetherbeei_contig1897:3679..38071683186160.3381007-CDS-P-wetherbeei_contig1897:3679..3807Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1897 3680..3807 +
1683186160.3473988-CDS-P-wetherbeei_contig1897:4033..50511683186160.3473988-CDS-P-wetherbeei_contig1897:4033..5051Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1897 4034..5051 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1897.3.2

>prot_P-wetherbeei_contig1897.3.2 ID=prot_P-wetherbeei_contig1897.3.2|Name=mRNA_P-wetherbeei_contig1897.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=572bp
MGGEMNESATLSPFLTSLDTTTCSAILLYLKMPDILSWRAVSQVRRAAFL
DNKHLIKHHQRLILDLYSSLLHLQAVCGLSVDRDDDDAPAAGRGPWARPP
RLAAHVPEPGRVWAVAHRGSSAAFEGNSFPAFWEALVVGADMIELDVALC
RTGHVVVHHDTVVEHTGDALRMLGLDKVRQLIPHVVTLDQVLACPRLRNS
EMRVYFDIKGDHVVRPLMHLLHAAVTNGRWDPARLLVASFDSFHLLEVDA
FRRAFPEMSGVGTAVIIDATPLSLAREPAALGCSWISVGRDQCHPRFVAD
AHRRGLCVMVWTVNKGADAAELLAAPLEERVDGIISDYPEVIIAQRTARE
ELEQGQRNAAAAAAAAAAAAAANPVPGAAAAGNAAAAVGGAGAAMATAAA
AAGTLELLRTVYRSLEAARGSVAAAVAEGRVAVELARRAKPVTVLAAEST
QGAAAVAQLAMLVAETEAAATALLQPLILSPRALKLALASVKSGAVPALP
ASPSEPNYDAATTAAAADGSNGGSDAAEHRATAWNGFHGGGSGAARGKYH
LNLLPFERAWLATACSAAQVH*
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mRNA from alignment at P-wetherbeei_contig1897:2088..5140+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1897.3.2 ID=mRNA_P-wetherbeei_contig1897.3.2|Name=mRNA_P-wetherbeei_contig1897.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3053bp|location=Sequence derived from alignment at P-wetherbeei_contig1897:2088..5140+ (Phaeothamnion wetherbeei SAG_119_79)
CTACGGGATACAGCAGAAGCGCTGTTAATTGTGCGATGTTGTTTGGGCGG TTGGTTTACCAAAATATAAATTGGGTTAGGAGCGCTGTCGGAGTCGGCGA CTGGTGGTGAGCGTGTCGTGACCGTGGTTCTCTTGCTGATAGTGCCTCCA GCTATTGAGAGCCATTATTTTCTTCTTAAGAAACGATGGGTGGCGAAATG AATGAGAGCGCGACGCTCTCCCCCTTCCTCACCTCGCTGGACACCACAAC GTGTTCTGCTATTCTGCTGTACCTGAAAATGCCTGACATATTATCCTGGC GGGCCGTCTCCCAGGTGTGCGCGCCGTTCTTGAATCTTCGCTGGTTGGTT GAACTTGGTCTTATTTTCTCTTCGTGGGCGGTGACGCGCGGCTTGCCGAG GCGGACGGACTATGAAAGGATGTTTAATGCCACTCCTGCAGCTCTTACCA TTTTTTATTATTTTTGCCTCTTCCCAACTCCGAAGGATGGAAAACAGCGA TAGCAGGACGAATAGGCAACAGGGAAAGTTAATTTTCACAACTCATATCC GTTGACAGCTCTCACCTCTTAAATTCCTACCAGGTTCGACGAGCCGCCTT TCTGGACAACAAACACCTCATCAAGCACCACCAGCGCCTCATATTGGACC TTTACTCCTCCCTCCTACACCTCCAAGCGGTCTGCGGCCTCTCGGTTGAT CGCGACGACGACGACGCCCCCGCCGCGGGCCGCGGCCCGTGGGCGCGGCC GCCGCGCCTCGCTGCACATGTGCCCGAGCCCGGACGGGTGTGGGCCGTCG CCCACCGCGGTTCGTCTGCGGCGTTCGAGGGCAATTCCTTCCCGGCTTTT TGGGAGGCGCTGGTGGTCGGCGCCGACATGATCGAGCTGGACGTGGCGCT CTGTCGCACGGGGCATGTCGTGGTGCGTTTCAATGCTGTGGCTTCGCAGC GGCTGTTGGCAAAACAGAACCGCAACTAAGAAGACTTTTACAGTGGAAGG CCTTTCTTGGCGTTGCGTTCGGAGCTTTTATGATGGGGAAGCATCTAATG CTGATGAGCGCTATTCGCAGAGACGGTGACGTTAGATTCGTTTAGCATGG CCTCCGTCATATCGAACATATTCTTCAACCTTCTCCTTCATCCGCTTGAC GGCTTTCGTTTTTTCCTGTCTGTTTCTTTTTGCCATCAGGTGCACCACGA CACGGTGGTGGAGCACACGGGCGACGCGCTGCGGATGCTGGGCCTGGACA AGGTGCGGCAGCTCATTCCCCACGTTGTCACCCTCGACCAGGTACAGAAA GCGGCTGCAACCGTCTGGATCCTTCGTCCGGGCTCGTGTTTTCAGGCTTA TATCAGCCTTTCCGATTCGTTTTGCTGGAACTCCAGGTTGTTTTACTGCA GACTTCGTTATGAAACGCTTTTTTTCCTACTGTGCGTCAGTGGCGACGCT GCTGGATGCAGCAGGGCCTCCTAACAGCAACGCGGAGGCATTGTGCAGAT TTGCTGCCCCCTTAAGCCTGTCAAATCCGTCTTTAACTGCCTTTCTTCAC ATCCGCAGTTGGGCTCAACTGTGACCTCTTTGCTGCGGGCAGGTTCTGGC GTGCCCACGGCTGCGGAATTCCGAGATGCGCGTCTACTTTGACATAAAGG GCGACCACGTGGTGCGGCCCCTGATGCACCTGCTGCACGCTGCTGTGACC AACGGCAGATGGGACCCTGCGTAAGTTCGTGATACTTTAGGACGTTGTCG CATCGCTTGTAGCTAACTTTCCGCCACCGTTTCCGTTGACCTTTCTGCGA CGATTGCAGAACAGGAAGAACACCTTCGGTATGGATACCGTTGATCCCTT CCTGTTTCCTTTTTGACATCTTCCTTAGCCTGTTTTGACCGGCAGCACCC ACGGGGCTCCAGCTTTCGACAATTCCGAATAATACCAACTTTCCAGGCGG CTGCTGGTGGCGTCGTTCGATTCCTTCCACCTGCTCGAAGTGGATGCCTT CCGCCGCGCCTTCCCCGAGATGAGCGGCGTCGGCACCGCCGTCATCATCG ATGCCACGCCGCTGTCGCTAGCCCGCGAGCCCGCCGCCCTCGGCTGCAGC TGGATCAGCGTCGGCCGCGACCAGTGCCATCCTCGCTTCGTGGCTGACGC CCACCGCCGCGGCCTTTGCGTCATGGTCTGGACCGTCAATAAGGGGGCCG ACGCCGCAGAGCTCTTAGCAGCGCCGCTAGAGGAACGAGTCGATGGAATC ATATCGGACTACCCGGAGGTCATAATTGCGCAGCGGACGGCACGAGAGGA ACTGGAGCAAGGGCAGCGAAACGCTGCTGCTGCGGCGGCTGCGGCGGCGG CGGCCGCTGCGGCAAATCCAGTGCCGGGGGCCGCGGCAGCTGGGAATGCC GCGGCGGCGGTGGGCGGTGCCGGGGCGGCCATGGCGACGGCTGCGGCGGC GGCGGGAACTTTAGAGCTGCTGCGGACGGTGTATCGCTCGCTGGAGGCGG CGCGCGGGTCGGTGGCGGCGGCGGTGGCGGAAGGCCGCGTGGCGGTGGAG CTGGCGCGGCGGGCCAAGCCCGTGACGGTTCTGGCAGCGGAGTCGACACA GGGGGCGGCGGCGGTGGCGCAGCTGGCGATGCTCGTTGCCGAGACGGAAG CGGCGGCGACGGCGCTGCTGCAGCCTCTCATCTTGTCGCCGCGGGCGCTC AAGCTGGCTCTTGCGTCAGTCAAGAGCGGCGCCGTGCCTGCCTTGCCGGC TTCGCCTAGTGAGCCAAATTACGACGCGGCTACTACTGCTGCGGCAGCAG ATGGCAGCAACGGCGGCAGCGATGCGGCGGAACACCGTGCCACGGCGTGG AACGGCTTCCACGGCGGCGGCAGCGGTGCGGCGAGAGGGAAGTACCACCT CAACCTCCTGCCGTTCGAGCGGGCGTGGCTCGCCACTGCATGCAGCGCGG CGCAAGTCCACTGAGCGAGATTGCCTTTCGGCTGGCTCTGTATGTTCATT TAATGAGGGGGAGGGGGAGACAAGCCCTGGATCTAGGCAGCGAAGAGCGG GCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1897:2088..5140+

>mRNA_P-wetherbeei_contig1897.3.2 ID=mRNA_P-wetherbeei_contig1897.3.2|Name=mRNA_P-wetherbeei_contig1897.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1716bp|location=Sequence derived from alignment at P-wetherbeei_contig1897:2088..5140+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGTGGCGAAATGAATGAGAGCGCGACGCTCTCCCCCTTCCTCACCTC
GCTGGACACCACAACGTGTTCTGCTATTCTGCTGTACCTGAAAATGCCTG
ACATATTATCCTGGCGGGCCGTCTCCCAGGTTCGACGAGCCGCCTTTCTG
GACAACAAACACCTCATCAAGCACCACCAGCGCCTCATATTGGACCTTTA
CTCCTCCCTCCTACACCTCCAAGCGGTCTGCGGCCTCTCGGTTGATCGCG
ACGACGACGACGCCCCCGCCGCGGGCCGCGGCCCGTGGGCGCGGCCGCCG
CGCCTCGCTGCACATGTGCCCGAGCCCGGACGGGTGTGGGCCGTCGCCCA
CCGCGGTTCGTCTGCGGCGTTCGAGGGCAATTCCTTCCCGGCTTTTTGGG
AGGCGCTGGTGGTCGGCGCCGACATGATCGAGCTGGACGTGGCGCTCTGT
CGCACGGGGCATGTCGTGGTGCACCACGACACGGTGGTGGAGCACACGGG
CGACGCGCTGCGGATGCTGGGCCTGGACAAGGTGCGGCAGCTCATTCCCC
ACGTTGTCACCCTCGACCAGGTTCTGGCGTGCCCACGGCTGCGGAATTCC
GAGATGCGCGTCTACTTTGACATAAAGGGCGACCACGTGGTGCGGCCCCT
GATGCACCTGCTGCACGCTGCTGTGACCAACGGCAGATGGGACCCTGCGC
GGCTGCTGGTGGCGTCGTTCGATTCCTTCCACCTGCTCGAAGTGGATGCC
TTCCGCCGCGCCTTCCCCGAGATGAGCGGCGTCGGCACCGCCGTCATCAT
CGATGCCACGCCGCTGTCGCTAGCCCGCGAGCCCGCCGCCCTCGGCTGCA
GCTGGATCAGCGTCGGCCGCGACCAGTGCCATCCTCGCTTCGTGGCTGAC
GCCCACCGCCGCGGCCTTTGCGTCATGGTCTGGACCGTCAATAAGGGGGC
CGACGCCGCAGAGCTCTTAGCAGCGCCGCTAGAGGAACGAGTCGATGGAA
TCATATCGGACTACCCGGAGGTCATAATTGCGCAGCGGACGGCACGAGAG
GAACTGGAGCAAGGGCAGCGAAACGCTGCTGCTGCGGCGGCTGCGGCGGC
GGCGGCCGCTGCGGCAAATCCAGTGCCGGGGGCCGCGGCAGCTGGGAATG
CCGCGGCGGCGGTGGGCGGTGCCGGGGCGGCCATGGCGACGGCTGCGGCG
GCGGCGGGAACTTTAGAGCTGCTGCGGACGGTGTATCGCTCGCTGGAGGC
GGCGCGCGGGTCGGTGGCGGCGGCGGTGGCGGAAGGCCGCGTGGCGGTGG
AGCTGGCGCGGCGGGCCAAGCCCGTGACGGTTCTGGCAGCGGAGTCGACA
CAGGGGGCGGCGGCGGTGGCGCAGCTGGCGATGCTCGTTGCCGAGACGGA
AGCGGCGGCGACGGCGCTGCTGCAGCCTCTCATCTTGTCGCCGCGGGCGC
TCAAGCTGGCTCTTGCGTCAGTCAAGAGCGGCGCCGTGCCTGCCTTGCCG
GCTTCGCCTAGTGAGCCAAATTACGACGCGGCTACTACTGCTGCGGCAGC
AGATGGCAGCAACGGCGGCAGCGATGCGGCGGAACACCGTGCCACGGCGT
GGAACGGCTTCCACGGCGGCGGCAGCGGTGCGGCGAGAGGGAAGTACCAC
CTCAACCTCCTGCCGTTCGAGCGGGCGTGGCTCGCCACTGCATGCAGCGC
GGCGCAAGTCCACTGA
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