mRNA_P-wetherbeei_contig18884.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18884.2.1 vs. uniprot
Match: A0A7K1B6F7_9ACTN (DNA helicase n=2 Tax=root TaxID=1 RepID=A0A7K1B6F7_9ACTN) HSP 1 Score: 134 bits (338), Expect = 3.860e-34 Identity = 79/130 (60.77%), Postives = 93/130 (71.54%), Query Frame = 1
Query: 1 SSAVSAEQIAEEGRLLYVALTRASSRLVITHAATRRNAPAAPSPWLAAVEATTEADRPAPPPVV--RARAAPDPMVPMRAWRSSVARAAGVVDIAVCSDRVLRSLLDDPPETTPALAERLGISVTAAQRL 384
SSA +A Q AEE RLLYVALTRAS LV+T AA RR+ APS WL AV AT E +RP PPP V R A PDPM P+R WR++VARAAGV AVC+D+VLR LL PP T +A RLG+ ++AA+RL
Sbjct: 502 SSATTAAQRAEEARLLYVALTRASDTLVVTWAARRRDVSGAPSAWLEAVAATIEVERPLPPPAVLRRTGAPPDPMAPLRDWRAAVARAAGVEARAVCTDQVLRGLLASPPRDTTEVARRLGLGLSAAERL 631
BLAST of mRNA_P-wetherbeei_contig18884.2.1 vs. uniprot
Match: A0A7X9KLX6_9ACTN (DNA helicase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KLX6_9ACTN) HSP 1 Score: 127 bits (318), Expect = 2.220e-33 Identity = 72/132 (54.55%), Postives = 92/132 (69.70%), Query Frame = 1
Query: 4 SAVSAEQIAEEGRLLYVALTRASSRLVITHAATRRNAPAAPSPWLAAVEATTEADRPAPPPVVRARAAPDPMVPMRAWRSSVARAAGVVDIAVCSDRVLRSLLDDPPETTPALAERLGISVTAAQRLTLPPS 399
SA S Q+AEE RL YVA+TRA+ L++TH A R+ PAAPS WL AV +T D PAPPP R+R DP++P+R WR+++AR +G ++AVCSDRVLRSL + PP LA RLGI+ TAA RL P+
Sbjct: 146 SAGSQAQLAEEARLFYVAITRAAQHLLVTHCAQRQRKPAAPSRWLQAVTDSTALDVPAPPPT-RSRLPTDPLLPLREWRAAIARVSGQPELAVCSDRVLRSLAETPPADAAELARRLGITETAAARLRPLPT 276
BLAST of mRNA_P-wetherbeei_contig18884.2.1 vs. uniprot
Match: A0A6I3EWW3_9ACTN (DNA helicase n=2 Tax=root TaxID=1 RepID=A0A6I3EWW3_9ACTN) HSP 1 Score: 112 bits (281), Expect = 2.170e-26 Identity = 66/128 (51.56%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 1 SSAVSAEQIAEEGRLLYVALTRASSRLVITHAATRRNAPAAPSPWLAAVEATTEADRPAPPPVVRARAAPDPMVPMRAWRSSVARAAGVVDIAVCSDRVLRSLLDDPPETTPALAERLGISVTAAQRL 384
+SA S Q+AEE RL YVA+TRA+ L ITHA++R P APS WLAAV A+ D PP R + DP+ + WR+++ARA+G D +VC+DRVLRSL +PP + LA+RLGI+ TAA RL
Sbjct: 453 ASASSTAQLAEEARLFYVAITRAAHDLTITHASSRHGKPTAPSRWLAAVAASGAGDEVVVPPT-RPISVADPLAALHDWRAAIARASGQPDTSVCTDRVLRSLAAEPPTSAAELAQRLGITETAAARL 579
BLAST of mRNA_P-wetherbeei_contig18884.2.1 vs. uniprot
Match: A0A539DVD7_9ACTN (DNA helicase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DVD7_9ACTN) HSP 1 Score: 108 bits (270), Expect = 6.830e-25 Identity = 69/132 (52.27%), Postives = 81/132 (61.36%), Query Frame = 1
Query: 1 SSAVSAEQIAEEGRLLYVALTRASSRLVITHAATRRNAPAAPSPWLAAVEATTEADRPAPPPVVRA--RAAP--DPMVPMRAWRSSVARAAGVVDIAVCSDRVLRSLLDDPPETTPALAERLGISVTAAQRL 384
+SA Q AEE RLLYVALTRA LV+T A R +P PSPWL AV A D P + A R AP DP+ +R WRS+VARA V D+AVC DRVLRSLL D P L +RLG+ +AA+RL
Sbjct: 431 ASASGEAQRAEEARLLYVALTRAEDELVVTSARARNGSPTGPSPWLLAVRAANPPDVTRGPAIAEASQRPAPVVDPLDTLRRWRSTVARAGSVADVAVCPDRVLRSLLADRPADATELGDRLGMGRSAAERL 562
BLAST of mRNA_P-wetherbeei_contig18884.2.1 vs. uniprot
Match: A0A7Y2EWA6_9ACTN (DNA helicase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y2EWA6_9ACTN) HSP 1 Score: 73.2 bits (178), Expect = 1.370e-12 Identity = 52/128 (40.62%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 4 SAVSAEQIAEEGRLLYVALTRASSRLVITHAATRRNAPAAPSPWLAAVEATTEADRPAPPPVVRARAAPDPMVP-MRAWRSSVARAAGVVDIAVCSDRVLRSLLDDPPETTPALAERLGISVTAAQRL 384
SA + AEEGRLLYVA TRA+ RLV+T A R SP++A ++ T P P + R R + DP++ +R WR AR AGV+ +CSDR L ++ P T LAE A RL
Sbjct: 196 SATTVATRAEEGRLLYVATTRATDRLVLTAAERRAGYARTVSPFIAELDVTEPEALPPPSALRRRRRSVDPLLAALRQWREETARTAGVLPAQLCSDRDLSAIAARRPATAEDLAEATTFGTIMAHRL 323
BLAST of mRNA_P-wetherbeei_contig18884.2.1 vs. uniprot
Match: A0A524B2C2_9ACTN (DNA helicase n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B2C2_9ACTN) HSP 1 Score: 67.8 bits (164), Expect = 1.500e-10 Identity = 54/136 (39.71%), Postives = 70/136 (51.47%), Query Frame = 1
Query: 1 SSAVSAEQIAEEGRLLYVALTRASSRLVITHAATRRNAPAAPSPWLAAVEATTEADRPAPPPV-----VRARAAPDPMVPMRA----WRSSVARAAGVVDIAVCSDRVLRSLLDDPPETTPALAERLGISVTAAQR 381
SSA + ++AEE RL YVA+TRAS RLV+T A +RR +PSP+L A + DR AP P V R P P P+ A WR AR++ V +CSD + + P T LAE G+ A R
Sbjct: 521 SSARTGAEVAEEMRLSYVAITRASDRLVVTRAESRRGRRTSPSPYLDAFP--PDPDREAPSPEFLAGQVARRIEPTPSDPIAARLFEWRDQAARSSRVDPRLICSDATIELIARTKPSTIDELAEIPGVGRPLAHR 654
BLAST of mRNA_P-wetherbeei_contig18884.2.1 vs. uniprot
Match: A0A2E3TV53_9ACTN (DNA helicase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A2E3TV53_9ACTN) HSP 1 Score: 65.5 bits (158), Expect = 9.610e-10 Identity = 49/129 (37.98%), Postives = 65/129 (50.39%), Query Frame = 1
Query: 4 SAVSAEQIAEEGRLLYVALTRASSRLVITHAATRRNAPAAPSPWLAAVEATTEADRPAPPPVVRARAAPDPMV--PMRAWRSSVARAAGVVDIAVCSDRVLRSLLDDPPETTPALAERLGISVTAAQRL 384
SA + E AEE RLLYVA+TRAS RLV+T + R PSP++ ++ T A P P + R R + + +R WR+ AR A V+ +CSDR L S+ P T L A RL
Sbjct: 513 SATTKEAKAEEARLLYVAVTRASDRLVLTRSERRGGYARTPSPFVVDLDFTEPAAAPLPRELHRKRRSQVDLTLSALRTWRNESARKADVLPSQLCSDRDLNSIASSKPTTVAELEANTSFGPIMAARL 641
BLAST of mRNA_P-wetherbeei_contig18884.2.1 vs. uniprot
Match: A0A3C2B2D2_9ACTN (DNA helicase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B2D2_9ACTN) HSP 1 Score: 64.3 bits (155), Expect = 2.370e-9 Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 1 SSAVSAEQIAEEGRLLYVALTRASSRLVITHAATRRNAPAAPSPWLAAVEATTEADRPAPPPVVR 195
+SA S Q+AEE RLLYVA+TRAS +LV++ AA R + PS WL AV AT AD PAPPP R
Sbjct: 480 ASAASPAQMAEEARLLYVAITRASHQLVLSAAAQRNGRASEPSRWLQAVAATAAADAPAPPPTAR 544
BLAST of mRNA_P-wetherbeei_contig18884.2.1 vs. uniprot
Match: A0A2G6K6N4_9ACTN (DNA helicase n=1 Tax=Ilumatobacter coccineus TaxID=467094 RepID=A0A2G6K6N4_9ACTN) HSP 1 Score: 57.8 bits (138), Expect = 1.150e-7 Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 28 AEEGRLLYVALTRASSRLVITHAATRRNAPAAPSPWLAAVEATTEADRPAPPPVVRARAAPDPMV--PMRAWRSSVARAAGVVDIAVCSDRVLRSLLDDPPETTPALAERLGISVTAAQR 381
AEE RLLYVA+TRA+ RL I + R N +P+L + + P P +V + ++ +RAWRS+ A+ +G++ AVCSD+ L + D P + L+ GI A R
Sbjct: 44 AEEARLLYVAITRATDRLTIHWSRRRANYQRRCTPFLEGLTIERQPAVPRPDSLVWPSRSERSVILDRLRAWRSTTAQVSGILPEAVCSDQALARIADAQPSSATELSTVTGIGPITANR 163
BLAST of mRNA_P-wetherbeei_contig18884.2.1 vs. uniprot
Match: A0A381XBI1_9ZZZZ (DNA helicase n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381XBI1_9ZZZZ) HSP 1 Score: 58.2 bits (139), Expect = 3.440e-7 Identity = 56/139 (40.29%), Postives = 67/139 (48.20%), Query Frame = 1
Query: 19 EQIAEEGRLLYVALTRASSRLVITHAATRRNAPAA----PSPWLAAVEATTEA-DRPAPP--PVVRARAA-------PDPMVP----MRAWRSSVARAAGVVDIAVCSDRVLRSLLDDPPETTPALAERLGISVTAAQR 381
E +AEE RLLYVALTRA L + AA RR A PSPWL + A E +RP P RAR A P P P +R WR + ARAA V + ++ L +LL+ P T L E GI A R
Sbjct: 522 EAVAEERRLLYVALTRAKDNLYCSWAAERRFANRTSNRNPSPWLENLAAAIEGLERPLQPRDQGSRARTARQRTGRTPPPDTPGIAALREWRKTAARAADVPAYVIFNNTTLETLLERRPATRADLLEISGIGPVKADR 660 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18884.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18884.2.1 >prot_P-wetherbeei_contig18884.2.1 ID=prot_P-wetherbeei_contig18884.2.1|Name=mRNA_P-wetherbeei_contig18884.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=136bp SSAVSAEQIAEEGRLLYVALTRASSRLVITHAATRRNAPAAPSPWLAAVEback to top mRNA from alignment at P-wetherbeei_contig18884:913..1320- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18884.2.1 ID=mRNA_P-wetherbeei_contig18884.2.1|Name=mRNA_P-wetherbeei_contig18884.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig18884:913..1320- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18884:913..1320- >mRNA_P-wetherbeei_contig18884.2.1 ID=mRNA_P-wetherbeei_contig18884.2.1|Name=mRNA_P-wetherbeei_contig18884.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig18884:913..1320- (Phaeothamnion wetherbeei SAG_119_79)back to top |