mRNA_P-wetherbeei_contig18884.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18884.1.1
Unique NamemRNA_P-wetherbeei_contig18884.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18884.1.1 vs. uniprot
Match: A0A7X9KLW1_9ACTN (PaaI family thioesterase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KLW1_9ACTN)

HSP 1 Score: 203 bits (516), Expect = 1.970e-62
Identity = 108/206 (52.43%), Postives = 137/206 (66.50%), Query Frame = 1
Query:   46 DARLRLADATRRIIDQLASSSTDAAAFAVARDLVEQAAATLAERDSVRAYEGAAEGAVGDVTGFDLDAIYQYSPFLGQLNPLAPPIRVTFDGATARGDVTYPIAYEGPPGCVHGGCIAAGFDEVLGVMQATTGRPGMTARLQIDYKSPTPLFRPVRYEARIVRVDGRKIFTECTLSVPEEGRLCAQAEGLFISMRTDGFADMMRDR 663
            D+R  LA+A RRI+D+LASS+ +  AFA A +LV+QA   LA  D  R Y+G      G +  +       +SP +G LNPLAPPI ++ DG    G VT+  AYEGPPGCVHGG IAA FDEVLG+ Q  +GRPGMTARL + Y+SP+PL + + +   I  VDGRKIFT+  L V  +GRLCA+AEGLFISM  + F  +M DR
Sbjct:   14 DSRAGLAEACRRIMDELASSTAETQAFAQASELVQQAVGILAGADHGRPYDGGE----GSLAHYQEHMFIDHSPLVGPLNPLAPPIAISADGTKVTGVVTFGAAYEGPPGCVHGGFIAAAFDEVLGLAQGMSGRPGMTARLTVQYRSPSPLLQELHFVGDIDHVDGRKIFTKGELRVAADGRLCAEAEGLFISMNPEIFQRLMNDR 215          
BLAST of mRNA_P-wetherbeei_contig18884.1.1 vs. uniprot
Match: A0A3C2B5P6_9ACTN (4HBT domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B5P6_9ACTN)

HSP 1 Score: 202 bits (513), Expect = 7.900e-62
Identity = 108/206 (52.43%), Postives = 136/206 (66.02%), Query Frame = 1
Query:   46 DARLRLADATRRIIDQLASSSTDAAAFAVARDLVEQAAATLAERDSVRAYEGAAEGAVGDVTGFDLDAIYQYSPFLGQLNPLAPPIRVTFDGATARGDVTYPIAYEGPPGCVHGGCIAAGFDEVLGVMQATTGRPGMTARLQIDYKSPTPLFRPVRYEARIVRVDGRKIFTECTLSVPEEGRLCAQAEGLFISMRTDGFADMMRDR 663
            D RL LADA RRIID+LASS+ D+ +F+ A  LV+QAA  L      R YE A E ++G +  +       +SP +G LNPLAPP+  T DG    G VT+  AYEGPPGCVHGG IAA FDEVLG  Q  +G PGMT RL I Y+SPTPL + + +   + R+DGRKIFT   L V  +GRLCA+AEGLFIS++ + F  ++ DR
Sbjct:   18 DTRLALADACRRIIDELASSTADSGSFSTAAALVQQAADILEHHTHGRPYEPA-EASLGSMGDYQEHLFIDHSPLVGPLNPLAPPMVFTNDGTEVTGRVTFGGAYEGPPGCVHGGYIAAAFDEVLGFAQGMSGAPGMTGRLSISYRSPTPLHQALEFRGDVERIDGRKIFTRGELRVAADGRLCAEAEGLFISVKPETFQRLITDR 222          
BLAST of mRNA_P-wetherbeei_contig18884.1.1 vs. uniprot
Match: A0A6I3WKM0_9ACTN (PaaI family thioesterase n=2 Tax=root TaxID=1 RepID=A0A6I3WKM0_9ACTN)

HSP 1 Score: 189 bits (481), Expect = 1.270e-56
Identity = 113/216 (52.31%), Postives = 139/216 (64.35%), Query Frame = 1
Query:   40 PIDARLRLADATRRIIDQLASSSTDAAAFAVARDLVEQAAATLAERDSVRAYEGAAEGAVGDVTGFDLDAIYQYSPFLGQLNPLAPPIRVTFDGATARGDVT----YPIAYEGPPGCVHGGCIAAGFDEVLGVMQATTGRPGMTARLQIDYKSPTPLFRPVRYEARIVRVDGRKIFTECTLSVPEEGRLCAQAEGLFISMRTDGFADMMRDRMNNA 675
            P  AR  LA ATR IID+L  S+ D      A  LV  AAA L E+   R Y G AEG++ +     +D    +SPF+G LNPLAPPI V FD    +GDVT    Y  AYEGPPGC+HGG IAAGFDEVLG  QA +G+PGMT RL I Y+SPTPLFR VR+  R+ R+DGRKI+    L V +   LCA+AEGLFISM+ + F  +++ R  +A
Sbjct:   45 PTGARAELAAATRIIIDELMRSTADDLDLEQAAALVVNAAALLQEQSHGRGYVGVAEGSLANGHQSFID----FSPFIGVLNPLAPPIIVRFDD---KGDVTATCTYGAAYEGPPGCLHGGFIAAGFDEVLGFAQAQSGQPGMTGRLTITYRSPTPLFREVRFAGRLDRIDGRKIYASAELMVDDT--LCAEAEGLFISMKPEVFERLLKLRGGSA 251          
BLAST of mRNA_P-wetherbeei_contig18884.1.1 vs. uniprot
Match: A0A7K1B5L6_9ACTN (PaaI family thioesterase n=2 Tax=root TaxID=1 RepID=A0A7K1B5L6_9ACTN)

HSP 1 Score: 188 bits (477), Expect = 2.470e-56
Identity = 108/209 (51.67%), Postives = 134/209 (64.11%), Query Frame = 1
Query:   40 PIDARLRLADATRRIIDQLASSSTDAAAFAVARDLVEQAAATLAERDSVRAYEGAAEGAVGDVTGFDLDAIYQYSPFLGQLNPLAPPIRVTF-DGATARGDVTYPIAYEGPPGCVHGGCIAAGFDEVLGVMQATTGRPGMTARLQIDYKSPTPLFRPVRYEARIVRVDGRKIFTECTLSVPEEGRLCAQAEGLFISMRTDGFADMMRDR 663
            P DARL L DA RRI+ +L SSS  +  F  A DLVE+AAA L  R   RAY GA E ++ D       +   +SP +G LNPLAPPI +   D  +  G+  +  AYEGPPGCVHGG +AA FDEVLG  Q+  G PGMTA LQ+DY+SPTPL RP+R+  RI  VDGRKI T  TL   +   LCA+A  LF+SM+ + F  +MR+R
Sbjct:   10 PDDARLPLTDAVRRIVAELTSSSASSDEFEQACDLVERAAAILEARGHARAYSGA-EASLSDHQD---SSFLDFSPLVGPLNPLAPPIAMHLADDGSVVGEAVFGSAYEGPPGCVHGGFVAASFDEVLGFAQSLGGHPGMTANLQVDYRSPTPLHRPLRFVGRIDHVDGRKIHTVATLHHGDT--LCAEARALFVSMKPEVFQRLMRER 212          
BLAST of mRNA_P-wetherbeei_contig18884.1.1 vs. uniprot
Match: A0A6I2WRS7_9ACTN (4HBT domain-containing protein n=4 Tax=root TaxID=1 RepID=A0A6I2WRS7_9ACTN)

HSP 1 Score: 187 bits (474), Expect = 9.200e-56
Identity = 102/210 (48.57%), Postives = 136/210 (64.76%), Query Frame = 1
Query:   49 ARLRLADATRRIIDQLASSSTDAAAFAVARDLVEQAAATLAERDSVRAYEGAAEGAVGDVTGFDLDAIYQYSPFLGQLNPLAPPIRVTFDGATARGDVTYPIAYEGPPGCVHGGCIAAGFDEVLGVMQATTGRPGMTARLQIDYKSPTPLFRPVRYEARIVRVDGRKIFTECTLSVPEEGRLCAQAEGLFISMRTDGFADMMRDRMNNAR 678
            A+  LADATRRIID+  ++  DAAA   A+ LV++AA  LA R+  R Y+  AEG++       +     YSPF+G +NP+APP+ + +      G  TY + YEGPPGC+HGG IAAGFDE+LG+ Q  +G+ GMT RL I Y+SPTPLFR + Y AR +R DGRK+F E TL   +   LCA+AEGLFI+M+ + F  +   R  N R
Sbjct:   36 AKADLADATRRIIDEQVTTIADAAAIREAQQLVKRAADLLAVREHGRPYDEPAEGSLQPP---QVRPFPSYSPFIGLMNPIAPPMTIEWGEDFVVGRATYGLVYEGPPGCLHGGFIAAGFDEILGLSQGLSGQVGMTGRLTISYRSPTPLFREIVYRARFIRKDGRKVFVEATLHAGDT--LCAEAEGLFIAMKPEFFEQLTALRGENHR 240          
BLAST of mRNA_P-wetherbeei_contig18884.1.1 vs. uniprot
Match: A0A6J6PWF7_9ZZZZ (Unannotated protein n=4 Tax=root TaxID=1 RepID=A0A6J6PWF7_9ZZZZ)

HSP 1 Score: 182 bits (463), Expect = 5.330e-54
Identity = 103/209 (49.28%), Postives = 135/209 (64.59%), Query Frame = 1
Query:   52 RLRLADATRRIIDQLASSSTDAAAFAVARDLVEQAAATLAERDSVRAYEGAAEGAVGDVTGFDLDAIYQYSPFLGQLNPLAPPIRVTF-DGATARGDVTYPIAYEGPPGCVHGGCIAAGFDEVLGVMQATTGRPGMTARLQIDYKSPTPLFRPVRYEARIVRVDGRKIFTECTLSVPEEGRLCAQAEGLFISMRTDGFADMMRDRMNNA 675
            R  LA+ATR +ID+L  ++ D +    A  LV+QAAA L ++   R+Y G AEG++ +     +D    +SPF+G LNPLAPPI + F +        TY  AYEGPPGC+HGG IAAGFDEVLG  QA +G  GMT RL I Y+SPTPLFR VR+  R+ RV+GRKI+    L   +   LCA+AEGLFISM+   F  +M+ R+ N+
Sbjct:   43 RAELAEATRVVIDELMRNNADDSELEAAASLVKQAAALLQQQSHGRSYVGVAEGSLANGHQNFID----FSPFIGVLNPLAPPISMNFAENGEVFATCTYGAAYEGPPGCLHGGFIAAGFDEVLGFAQAQSGSAGMTGRLTISYRSPTPLFREVRFTGRLDRVEGRKIYASAELRAGDT--LCAEAEGLFISMKPAVFERLMQIRLGNS 245          
BLAST of mRNA_P-wetherbeei_contig18884.1.1 vs. uniprot
Match: A0A3D0IBD1_9DELT (PaaI family thioesterase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D0IBD1_9DELT)

HSP 1 Score: 173 bits (438), Expect = 1.670e-50
Identity = 105/226 (46.46%), Postives = 131/226 (57.96%), Query Frame = 1
Query:    1 WPLTDGVGLMALDPIDARLRLADATRRIIDQLASSSTDAAAFAVARDLVEQAAATLAERDSVRAYEGAAEGA-VGDVTGFDLDAIYQYSPFLGQLNPLAPPIRVTFDGATARGDVTYPIAYEGPPGCVHGGCIAAGFDEVLGVMQATTGRPGMTARLQIDYKSPTPLFRPVRYEARIVRVDGRKIFTECTLSVPEEGRLCAQAEGLFISMRTDGFADMMRDRMNNA 675
            WP      L A      R RLA A R +ID+L +S    A    A D +E+ A  LA         G AE A  GDV  F     + YSP +G  NPLAPPI +  +G   RG VT+ IAYEGPPG VHGG IAA FDEVLG +Q+TTG PGMT  L I Y+ PTPL   +R++AR++RV+GRKIFTE  L   +   L A+AEGLF+S+      ++ R R  +A
Sbjct:   10 WPYWSSAHLEATGAWAERRRLAKAMREVIDRLVTSDAPEAELRAAADALERYARRLASHPRRVLPAGFAETANAGDVGAF-----FDYSPLIGLSNPLAPPIVLRVEGDVVRGTVTFGIAYEGPPGHVHGGFIAAAFDEVLGFVQSTTGHPGMTGELTIHYRKPTPLHEELRFDARVLRVEGRKIFTEGHLYAGD--LLTAEAEGLFVSVDLAKMGEIARRRRGSA 228          
BLAST of mRNA_P-wetherbeei_contig18884.1.1 vs. uniprot
Match: A0A094PKT6_9ACTN (4HBT domain-containing protein n=4 Tax=root TaxID=1 RepID=A0A094PKT6_9ACTN)

HSP 1 Score: 169 bits (428), Expect = 8.100e-49
Identity = 101/210 (48.10%), Postives = 129/210 (61.43%), Query Frame = 1
Query:   37 DPIDARLRLADATRRIIDQLASSSTDAAAFAVARDLVEQAAATLAERDSVRAYEGAAEGAVGDVT-GFDLDAIYQYSPFLGQLNPLAPPIRVTFDGATARGDVTYPIAYEGPPGCVHGGCIAAGFDEVLGVMQATTGRPGMTARLQIDYKSPTPLFRPVRYEARIVRVDGRKIFTECTLSVPEEGRLCAQAEGLFISMRTDGFADMMRDR 663
            DP + RLRLA+ATR ++   A+S+  A  FA A DL+EQAA+ LA     R+Y  +AEGAVG  T GF       +SP  G LN LA  I +          V Y  AYEGPPGC+HGG IAA FDEVLG  QA +G PGMT RL++ Y+SPTPL +P++   R   ++GRKI T   +   +  RLCAQA G FIS++ + FA +  DR
Sbjct:   37 DPNNPRLRLANATREVLQHSATSTAHADRFAQAADLLEQAASLLAPGPHGRSYHASAEGAVGGATHGF-----ISHSPVTGPLNGLAGLIELESTATEIIATVNYGDAYEGPPGCLHGGLIAAIFDEVLGFAQALSGAPGMTGRLEVTYRSPTPLHQPLKVTGRFDGINGRKIMTSGEIYAGD--RLCAQAVGTFISVKAEKFAALNNDR 239          
BLAST of mRNA_P-wetherbeei_contig18884.1.1 vs. uniprot
Match: A0A4V0X220_9ACTN (4HBT domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4V0X220_9ACTN)

HSP 1 Score: 169 bits (427), Expect = 8.550e-49
Identity = 97/210 (46.19%), Postives = 131/210 (62.38%), Query Frame = 1
Query:   49 ARLRLADATRRIIDQLASSSTDAAAFAVARDLVEQAAATLAERDSVRAYEGAAEGAVGDVTGFDLDAIYQYSPFLGQLNPLAPPIRVTFDG-----ATARGDVTYPIAYEGPPGCVHGGCIAAGFDEVLGVMQATTGRPGMTARLQIDYKSPTPLFRPVRYEARIVRVDGRKIFTECTLSVPEEGRLCAQAEGLFISMRTDGFADMMRDR 663
            AR+++AD  R +ID+L ++S         + ++ QA A L  R     YEG AEG++  +  F LD     SP +G +NPL+ P+++  DG     +T  G  T+P AYEGPPGCVHGG IAA FDEVLG+ Q+ +G PGMT  L I+Y+SPTPL +PV +  R+V +DGRKI    TL   E   LCA+A GLFISMR + FA ++  R
Sbjct:   26 ARIKIADEMRVVIDELLATSAPLEELEQTQMIINQAVALLKARPHSHEYEGPAEGSLAPLNSF-LDR----SPIIGAINPLSVPMKMEVDGDGGRDSTVIGYATFPAAYEGPPGCVHGGFIAAYFDEVLGMAQSLSGNPGMTVNLTINYRSPTPLKQPVVFRGRVVSIDGRKISVSGTLHHGET--LCAEASGLFISMRPEVFAKLIEIR 228          
BLAST of mRNA_P-wetherbeei_contig18884.1.1 vs. uniprot
Match: A0A7C2NM00_9DELT (PaaI family thioesterase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C2NM00_9DELT)

HSP 1 Score: 168 bits (425), Expect = 1.810e-48
Identity = 96/211 (45.50%), Postives = 126/211 (59.72%), Query Frame = 1
Query:   52 RLRLADATRRIIDQLASSSTDAAAFAVARDLVEQAAATLAERDSVRAYEGAAEGAVGDVTGFDLDAIYQYSPFLGQLNPLAPPIRVTFDGATARGDVTYPIAYEGPPGCVHGGCIAAGFDEVLGVMQATTGRPGMTARLQIDYKSPTPLFRPVRYEARIVRVDGRKIFTECTLSVPEEGRLCAQAEGLFISMRTDGFADMMRDRMNNARIP 684
            R RLA A R ++++L SS   A     A + +EQ A  LA     R YEG AE A+ +  G      + YSP +G+ NPLAPPI V  +     G+V +  AYEGPPGCVHGG +AA FDEVLG  Q+ TG PGMT RL++ Y+SPTPL   +R+EA +  V GRKI    TL   E  RLCA+A GLF+S++   F  ++++R      P
Sbjct:   30 RRRLAAAMRLVVERLTSSDAPADELRAAAERLEQYAEHLATHPRRRRYEGFAESALAEGGGH-----FDYSPLIGRSNPLAPPIDVREEEGRVHGEVVFGSAYEGPPGCVHGGYVAAAFDEVLGYAQSLTGAPGMTGRLEVVYRSPTPLHTRLRFEAWVESVAGRKITARGTLHAGE--RLCAEAMGLFVSIKPGTFERLVQERRGRGDDP 233          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18884.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9KLW1_9ACTN1.970e-6252.43PaaI family thioesterase n=1 Tax=Actinomycetia bac... [more]
A0A3C2B5P6_9ACTN7.900e-6252.434HBT domain-containing protein n=1 Tax=Acidimicrob... [more]
A0A6I3WKM0_9ACTN1.270e-5652.31PaaI family thioesterase n=2 Tax=root TaxID=1 RepI... [more]
A0A7K1B5L6_9ACTN2.470e-5651.67PaaI family thioesterase n=2 Tax=root TaxID=1 RepI... [more]
A0A6I2WRS7_9ACTN9.200e-5648.574HBT domain-containing protein n=4 Tax=root TaxID=... [more]
A0A6J6PWF7_9ZZZZ5.330e-5449.28Unannotated protein n=4 Tax=root TaxID=1 RepID=A0A... [more]
A0A3D0IBD1_9DELT1.670e-5046.46PaaI family thioesterase n=1 Tax=Deltaproteobacter... [more]
A0A094PKT6_9ACTN8.100e-4948.104HBT domain-containing protein n=4 Tax=root TaxID=... [more]
A0A4V0X220_9ACTN8.550e-4946.194HBT domain-containing protein n=1 Tax=Actinomycet... [more]
A0A7C2NM00_9DELT1.810e-4845.50PaaI family thioesterase n=1 Tax=Deltaproteobacter... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18884contigP-wetherbeei_contig18884:213..902 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1229780.BN381_10319
PFAMs4HBT
Model size690
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.74e-36
EggNOG OGsCOG2050@1|root,COG2050@2|Bacteria,2I11Y@201174|Actinobacteria,3UXR4@52018|unclassified Actinobacteria (class)
DescriptionThioesterase superfamily
Cds size663
COG categoryQ
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186157.6985145-UTR-P-wetherbeei_contig18884:212..2391683186157.6985145-UTR-P-wetherbeei_contig18884:212..239Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig18884 213..239 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186157.7122364-CDS-P-wetherbeei_contig18884:239..9021683186157.7122364-CDS-P-wetherbeei_contig18884:239..902Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18884 240..902 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18884.1.1prot_P-wetherbeei_contig18884.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18884 240..902 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18884.1.1

>prot_P-wetherbeei_contig18884.1.1 ID=prot_P-wetherbeei_contig18884.1.1|Name=mRNA_P-wetherbeei_contig18884.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=221bp
MALDPIDARLRLADATRRIIDQLASSSTDAAAFAVARDLVEQAAATLAER
DSVRAYEGAAEGAVGDVTGFDLDAIYQYSPFLGQLNPLAPPIRVTFDGAT
ARGDVTYPIAYEGPPGCVHGGCIAAGFDEVLGVMQATTGRPGMTARLQID
YKSPTPLFRPVRYEARIVRVDGRKIFTECTLSVPEEGRLCAQAEGLFISM
RTDGFADMMRDRMNNARIPD*
back to top

mRNA from alignment at P-wetherbeei_contig18884:213..902+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18884.1.1 ID=mRNA_P-wetherbeei_contig18884.1.1|Name=mRNA_P-wetherbeei_contig18884.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig18884:213..902+ (Phaeothamnion wetherbeei SAG_119_79)
TGGCCGTTGACTGATGGGGTGGGACTGATGGCCCTCGACCCCATCGACGC CCGTCTGCGCCTGGCCGATGCCACGCGGCGGATCATCGATCAGCTCGCCT CGTCGAGCACCGACGCCGCGGCGTTCGCGGTGGCGCGCGATCTCGTCGAG CAGGCGGCGGCGACGCTTGCCGAACGCGACAGCGTGCGCGCCTACGAGGG TGCCGCCGAGGGCGCGGTCGGCGACGTCACCGGATTCGACCTCGACGCCA TCTACCAGTACAGCCCGTTCCTCGGTCAGCTCAACCCGCTGGCCCCGCCG ATCCGCGTCACCTTCGACGGCGCCACGGCACGTGGGGATGTCACCTATCC AATCGCCTACGAAGGGCCGCCCGGCTGTGTGCACGGCGGCTGCATCGCGG CCGGGTTCGACGAGGTGCTCGGTGTGATGCAGGCCACCACCGGACGGCCG GGCATGACGGCGCGGCTGCAGATCGACTACAAGTCACCGACGCCGCTGTT CCGTCCGGTGCGCTACGAGGCGCGCATCGTGCGCGTGGACGGCCGCAAGA TCTTCACCGAATGCACGCTGAGCGTGCCGGAGGAAGGTCGGCTGTGCGCA CAGGCGGAAGGCTTGTTCATCTCGATGCGCACCGACGGCTTCGCCGACAT GATGCGCGACCGAATGAACAACGCACGCATCCCGGACTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig18884:213..902+

>mRNA_P-wetherbeei_contig18884.1.1 ID=mRNA_P-wetherbeei_contig18884.1.1|Name=mRNA_P-wetherbeei_contig18884.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig18884:213..902+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCCTCGACCCCATCGACGCCCGTCTGCGCCTGGCCGATGCCACGCG
GCGGATCATCGATCAGCTCGCCTCGTCGAGCACCGACGCCGCGGCGTTCG
CGGTGGCGCGCGATCTCGTCGAGCAGGCGGCGGCGACGCTTGCCGAACGC
GACAGCGTGCGCGCCTACGAGGGTGCCGCCGAGGGCGCGGTCGGCGACGT
CACCGGATTCGACCTCGACGCCATCTACCAGTACAGCCCGTTCCTCGGTC
AGCTCAACCCGCTGGCCCCGCCGATCCGCGTCACCTTCGACGGCGCCACG
GCACGTGGGGATGTCACCTATCCAATCGCCTACGAAGGGCCGCCCGGCTG
TGTGCACGGCGGCTGCATCGCGGCCGGGTTCGACGAGGTGCTCGGTGTGA
TGCAGGCCACCACCGGACGGCCGGGCATGACGGCGCGGCTGCAGATCGAC
TACAAGTCACCGACGCCGCTGTTCCGTCCGGTGCGCTACGAGGCGCGCAT
CGTGCGCGTGGACGGCCGCAAGATCTTCACCGAATGCACGCTGAGCGTGC
CGGAGGAAGGTCGGCTGTGCGCACAGGCGGAAGGCTTGTTCATCTCGATG
CGCACCGACGGCTTCGCCGACATGATGCGCGACCGAATGAACAACGCACG
CATCCCGGACTGA
back to top