mRNA_P-wetherbeei_contig1887.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1887.2.1
Unique NamemRNA_P-wetherbeei_contig1887.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA)

HSP 1 Score: 238 bits (606), Expect = 5.210e-67
Identity = 154/460 (33.48%), Postives = 219/460 (47.61%), Query Frame = 3
Query:  207 WTKIEVNTKKESPTARSGHNVVLAGRKAYVFGGCANA-----ALNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVVCDASCGVTPGGSGTGGDGSLSPTESSGGSRGSHGXXXXXXXXXXXXXXXXXXXXXXXXXXAALQTSERPPARSFHGAVFYKGSHVVVGGSNGVHKMSDVWRYAVAETPPSLAALAGRAVVSAAEVGEIDLMWL----PPEVQAGLNNINMLADKI 1559
            W K++  T    P+ RSGH+V + G K Y+FGGC         LND++T D+++ +W  VT A GD   VPS R    MCA      + + GG G + D LR+D+ EFDTR   W        +I G G D                     A     G ++C + +   L++FGGSTG  Y ND F +++    W +LAT G  PSPRYKH+AV+ GDA++V+GGG F+P +A +++++LDL  L W   A GG +P+ R AHS +FD  ++  Y+WGGFT  +   Q  +  D   A W E+    +    P                                                 XX        P AR+FH AVF+ G+  V  G+NG  + +DVWR+ V  TPP+L  LA RA++     G   +M L    P EV  G+ N+N  A ++
Sbjct:   30 WVKLQ--TSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVT-AKGDS--VPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWS-------KITGDGED---------------------APSRFYGQTVCRYGSV--LLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPS-----------------------------------------------AXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRS-GVQHMMCLETFVPQEVLDGVLNMNESAGRL 406          
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 1.430e-65
Identity = 145/460 (31.52%), Postives = 217/460 (47.17%), Query Frame = 3
Query:  201 HRWTKIEVNTKKESPTARSGHNVVLAGRKAYVFGGCAN-----AALNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVVCDASCGVTPGGSGTGGDGSLSPTESSGGSRGSHGXXXXXXXXXXXXXXXXXXXXXXXXXXAALQTSERPPARSFHGAVFYKGSHVVVGGSNGVHKMSDVWRYAVAETPPSLAALAGRAVVSAAE--VGEIDLMWLPPEVQAGLNNINMLADKI 1559
            ++WTK+  NT  +SP+ RSGH+VV+ G KAY+FGGC         LND++  ++E  +W++VT  G      P  R    MCA      L + GG G + D LR D+ E++    +W  +                              D+ +  C   G S+C +  +  L++FGGSTG  Y ND F +++   +W RL T+G +PSPRYKH+AV+ G  ++V+GGG F+P ++ ++++ LDL  L W      G +PK R AHS +FD E+   Y+WGGFT+ +   Q  +     TA W  +  + +     GG                                                  A      PPAR+FH A F++G   V  G+NG  + SDVWR+ V  TPPSL+ L    + S  E  + E+D M  P E+  G+  +N  AD++
Sbjct:   35 NQWTKL--NTSGDSPSPRSGHDVVVIGHKAYLFGGCGGEQDQITCLNDVYVFNLELHRWSKVTVKGD----APLPRASFGMCAGPAPGTLIVAGGTGVEMDSLRADVVEYNVPNRTWTQILT----------------------------DSEETPCKFYGQSVCTYGDN--LLLFGGSTGLHYTNDLFEYNVRTNKWKRLVTSGRMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDLRSLVWEETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQAPVAGG--------------------------------------------------ATDLVGAPPARAFHSAAFFQGGLYVFSGANGDVRYSDVWRFQVRSTPPSLSMLVAHKIKSGGEAPLKEMD-MRAPAELVQGVREMNEHADRL 407          
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A6H5JG58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG58_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 1.720e-60
Identity = 137/315 (43.49%), Postives = 172/315 (54.60%), Query Frame = 3
Query:  243 PTARSGHNVVLAGRKAYVFGGC--------ANAA--------------LNDLHTLDMETLKWTEVTPA--GGDGAVV---PSVRTCAAMCANDDGTA---LYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLV------MLRWSHVACGGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDL 1079
            PTARSGH   +A    YVFGGC        A+AA              L DLH  D+   +W+EV P     D A     P+ RTCAAMCA++   A   L+L GGAGDDP DLR   +EF  RR +W+LLY                    GG A P       + C RIGH++ + +T  RL++FGGSTG+EYFND  AF LA G W  LAT G+ PSPRYKH+A +  D ++VVGGG+FEP    L+V++L L       +L W  V   G  P+ RAAH LA+D+   A Y+WGGFT+GMEL      L L
Sbjct:   17 PTARSGHCATVARDALYVFGGCGHPTAASSASAASVDAQLPAEALPICLGDLHVYDLARQRWSEVRPPTRAADSASEEPRPAERTCAAMCASEGEDAEDRLFLSGGAGDDPYDLRGCCWEFCVRRRAWRLLY-------------------EGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLATGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLTAGGGKALLEWERVRPTGTPPRCRAAHGLAWDRVGRAAYIWGGFTSGMELDSTFCALRL 312          
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A836CLJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ1_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.380e-59
Identity = 126/296 (42.57%), Postives = 163/296 (55.07%), Query Frame = 3
Query:  243 PTARSGHNVVLAGRKAYVFGGCANAA------LNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSW-KLLY-PAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKGRAAHSLAFDK-ESAACYVWGGFTAGMELSQRLYKLDLRTARWEEV 1103
            P+ RSGH V L G KAY+FGGC  +A      LNDLH+ D+ETL+W  V   G +    P+VR  AAMCA DDG  L L GGAGDDPD LR+D+Y F T    W KLL  P A   C                                G S C    +  ++ FGGSTG EY N    ++L   RW +LAT G  P+PRYKH+A IHG +++V+GGG F+P    ++V +LDL  + W  VA  G++P  R AH+ A+D  E  A Y+WGGFTAG++  +  Y+L L T  W  +
Sbjct:   76 PSPRSGHTVCLVGGKAYLFGGCGRSAGVEDKCLNDLHSFDVETLRWERVETRGAEQ---PAVRRSAAMCALDDGRFL-LSGGAGDDPDHLRSDLYLFVTHTRVWTKLLEGPEAKPFC------------------------------LCGQSACLWQDT--ILFFGGSTGLEYSNALHQYNLKTNRWQQLATLGPRPTPRYKHQAFIHGSSMYVIGGGCFKPLCEDIDVHRLDLTTMTWRQVATRGSVPMARVAHTCAYDSSEGGAVYMWGGFTAGLQCLRNFYRLSLDTHTWTAI 335          
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA)

HSP 1 Score: 211 bits (538), Expect = 2.500e-57
Identity = 119/333 (35.74%), Postives = 171/333 (51.35%), Query Frame = 3
Query:  153 GSSRLRTSSFVSTETLHRWTKIEVNTKKESPTARSGHNVVLAGRKAYVFGGCAN------AALNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDG-TALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVVCDASCGVT 1130
            G SR R +     +TL RW  ++  T  + P+ RSGH+VV+ GRKAY+FGGC        A LND++T D++T +W  V   G      P  R    MCA      ++ + GG G + D LR D+ EFDTR  +W+ +                              D+ +  C   G S+C +  S  L++FGGSTG  Y ND + ++    RW +L T G  P+PRYKH+AVI G +++V+GGG F+P ++ ++V +LDL  L W  VA  G +PK R AHS  +D  +   ++WGGFT+ +   Q  Y L   TA W      A   V+
Sbjct:    2 GLSRKRPAHVAWEDTLGRWVCLQ--TSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEP----PLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVT----------------------------DSEETPCRFYGQSLCTYGES--LLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVS 298          
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A836CMQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ1_9STRA)

HSP 1 Score: 188 bits (478), Expect = 6.360e-49
Identity = 107/245 (43.67%), Postives = 138/245 (56.33%), Query Frame = 3
Query:  390 GAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDA------GQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKGRAAHSLAFDK-ESAACYVWGGFTAGMELSQRLYKLDLRTARWEEV 1103
            G V P+VR  AAMCA  DG  L L GGAGDDPD LR+D+Y FDTR  +W +L                            GDDA      GQ+AC       C+  T   ++ FGGSTG EY N+ F++ L   RW +LAT G  P+PRYKH+A IH D ++VVGGG F+P     +V KLDL+ + W+ VA  GA+P  R AH+ A+D  +  A Y+WGGFTAG++  +  YKL L T  W  +
Sbjct:   19 GTVRPAVRRSAAMCAVGDGRFL-LSGGAGDDPDHLRSDLYMFDTRTRTWTMLLE--------------------------GDDAKPFCLCGQSAC-------CWRGT---VLFFGGSTGLEYSNELFSYDLRTNRWQQLATKGPRPTPRYKHQAFIHNDCMYVVGGGCFKPLCEDTDVHKLDLLTMEWTTVATKGAVPMARVAHTCAYDSTDGGAVYMWGGFTAGLQCLRNFYKLALDTHTWTSI 226          
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A7S3ULU8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3ULU8_HETAK)

HSP 1 Score: 163 bits (412), Expect = 1.670e-41
Identity = 98/285 (34.39%), Postives = 142/285 (49.82%), Query Frame = 3
Query:  243 PTARSGHNVVLAGRKAYVFGGCANA-----ALNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFR-LATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDL 1079
            P  RSGH+V+    + ++FGGC  +      ++D    ++ TL W++V   G      PS R    MC       L + GG G +   +  DM+E++ R   W+ L                             DD G   C   G + C       L++FGGS+G+EY +  + F L   R+   +AT GD PS RYKH+AV+ GD L+V+GGGA++P+  +L++F+LDL    W  VA  GA P  R AH+ A+D  S A Y+WGGF A +E     Y+LDL
Sbjct:   12 PGERSGHSVLAMNGQVFLFGGCGGSEGNTPCMSDFICFNLSTLTWSKVQAEG----TTPSPRASFEMCRGCLPDTLIIAGGTGSEG--ICGDMHEYNARTRRWRQLVAR--------------------------DDPGSR-CRYYGQTACPWGDR-TLVLFGGSSGHEYTDHLYTFDLETLRFAGPVATTGDRPSARYKHQAVVVGDELYVLGGGAYKPTAPQLDIFRLDLTRWHWERVAAAGAAPPARVAHTCAYDPRSRALYLWGGFDAELERLNDFYRLDL 262          
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A7S3UWF1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWF1_HETAK)

HSP 1 Score: 159 bits (401), Expect = 1.310e-38
Identity = 105/312 (33.65%), Postives = 146/312 (46.79%), Query Frame = 3
Query:  207 WTKIEVNTKKESPTARSGHNVVLAGRKAYVFGGCANAA---LNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRN-DMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGST-GYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVAC-------GGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVV 1106
            W K+  +   E P  RSGH V++A  KAY+FGG   A    L+D ++ D     W  V   GG     P  RT  AMC   D   +YL GG   D   L + ++YE+D   S W L+      I    +D                           G S  Y+    +++ FGG   G  + N+     L   RW R+ T GD+P PRYKH+A + GD L+V+GGG + P E  L+V+ LDL    W+ V         GG +P+GRAAH+  +D  + A Y+WGGF  G+      ++LDLRT +W    
Sbjct:   52 WEKVSCS--GEMPCERSGHAVIVAQGKAYLFGGYGGANPCHLSDFYSFDFAKGAWETVRAPGG-----PCPRTAFAMCVTPD-DFVYLWGGTDHDLQGLEDQELYEYDVYNSRWSLVDTVNKGI----LD-----------------------LRYFGRSASYYKR--KILYFGGGVKGGRFTNELIQLDLDSFRWERVPTTGDLPCPRYKHQACVVGDRLYVLGGGCYLPPEETLDVYCLDLTTRVWAKVGAAAAAADGGGELPEGRAAHTCEYDAATGALYLWGGFNQGLVPLFDFWRLDLRTHQWARAA 326          
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: D8LLR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR4_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 1.110e-37
Identity = 137/461 (29.72%), Postives = 180/461 (39.05%), Query Frame = 3
Query:  243 PTARSGHNVVLAGRKAYVFGGCANAALNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLV------MLRWSHVACGGAIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVVCDASCGVTPGGSGTGGDGSLSPTESSGGSRGSHGXXXXXXXXXXXXXXXXXXXXXXXXXXAALQTSERPPARSFHGAVFYKGSHVVVGGSNGVHKMSDVWRYAVAETPPSLAALAGRAVVSAAEV----------------GEIDLMWLPPEVQAGLNNINMLADKI 1559
            PTARSGH   +A    YVFGGC +                    PA    A   SV       A     AL +C G          D++ +D  R  W                        GG A P       + C RIGH++ + +T  RL++FGGSTG+EYFND  AF LA G W  LAT G+ PSPRYKH+A +  D ++VVGGG+FEP    L+V++L L       +L W        +P    A + A     AA  V      G +LS            W  +            SG GG  + +                                       A   T   P  RSFH A F+ G+  + GGS+G  K  D+WR+   ETPP L  LA RA VS A                  G+ +L  LP E++  L  +NM A+ +
Sbjct:   17 PTARSGHCATVARDALYVFGGCGH--------------------PAAASSAAAASVD------AQLPAEALPICLG----------DLHVYDLARQRWS----------------------EGGSAAPSAAPETMSPCRRIGHTMVHDSTRNRLVIFGGSTGHEYFNDTQAFDLATGTWTALATTGERPSPRYKHQAFLDADFMYVVGGGSFEPEGPDLDVYRLPLTAGGGKALLEWERAP----VPSTATAAAAA----PAAVPV-----VGEKLS------------WVSLP-----------SGQGGSAAFAANAEE----------------------------------AGRATPSSPTGRSFHCAFFHGGACYITGGSDGARKFGDMWRFCARETPPPLTTLAARAFVSGATARRNGGGRGRVGGAGGDGKCELGGLPGELREALQRLNMQAEVV 349          
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Match: A0A836CD99_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD99_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.340e-37
Identity = 111/424 (26.18%), Postives = 176/424 (41.51%), Query Frame = 3
Query:  201 HRWTKIEVNTKKESPTARSGHNVVLAGRKAYVFGGCANAALNDLHTLDMETLKWTEVTPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDTRRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGHSICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRYKHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGG-AIPKGRAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVVCDASCGVTPGGSGTGGDGSLSPTESSGGSRGSHGXXXXXXXXXXXXXXXXXXXXXXXXXXAALQTSERPPARSFHGAVFYKGSHVVVGGSNGVHKMSDVWRYAVAETPPSLAALAGRAVVS 1469
            HRW  + + T  + PT RSG    +     Y+FGGC     ND++  D++T +W  VT   G     PS R    MC+        +  G G      ++D++ FD RR  W+ L+                                ++  A  G SIC+H ++  L+++GG++G EY+   +AF+L  G   R+ T+G  PS RYKH + ++G+ ++V GGG F P+E  + + KL+L  L W  +      +  GR A +  FD ES+  +V+GGF +  +  Q     D+ +  W EV                                                               ++    P  R+FH  V  +G+  +  G++G     DVWRY++  TPP L  LA RA ++
Sbjct:   11 HRW--LRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDAVMQNDIYRFDVDTHEWCAVTCDDG-----PSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLF--------------------------------ESPRAAYGVSICWHGST--LLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEV-------------------------------------------------------------GGVKAETSPAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFLT 332          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1887.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CQE2_9STRA5.210e-6733.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FP90_ECTSI1.430e-6531.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JG58_9PHAE1.720e-6043.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CLJ1_9STRA1.380e-5942.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEB6_9STRA2.500e-5735.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMQ1_9STRA6.360e-4943.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3ULU8_HETAK1.670e-4134.39Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3UWF1_HETAK1.310e-3833.65Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D8LLR4_ECTSI1.110e-3729.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CD99_9STRA1.340e-3726.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1887contigP-wetherbeei_contig1887:1497..4185 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FP90
PFAMsKelch_1,Kelch_3,Kelch_4,Kelch_5,Kelch_6
Model size2451
Max annot lvl2759|Eukaryota
KEGG koko:K20285
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.84e-69
EggNOG OGsKOG0379@1|root,KOG0379@2759|Eukaryota
Ec32 ortholog descriptionKelch-type beta propeller
Ec32 orthologEc-04_004790.1
Descriptionnitrile biosynthetic process
Cds size1494
COG categoryP
BRITEko00000,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186157.3939087-UTR-P-wetherbeei_contig1887:1496..23821683186157.3939087-UTR-P-wetherbeei_contig1887:1496..2382Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1887 1497..2382 -
1683186157.4178724-UTR-P-wetherbeei_contig1887:4114..41851683186157.4178724-UTR-P-wetherbeei_contig1887:4114..4185Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1887 4115..4185 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186157.402682-CDS-P-wetherbeei_contig1887:2382..29621683186157.402682-CDS-P-wetherbeei_contig1887:2382..2962Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1887 2383..2962 -
1683186157.410323-CDS-P-wetherbeei_contig1887:3200..41141683186157.410323-CDS-P-wetherbeei_contig1887:3200..4114Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1887 3201..4114 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1887.2.1prot_P-wetherbeei_contig1887.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1887 2383..4114 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1887.2.1

>prot_P-wetherbeei_contig1887.2.1 ID=prot_P-wetherbeei_contig1887.2.1|Name=mRNA_P-wetherbeei_contig1887.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=498bp
MAPRICHPVVPVHGYAPALPRGGNWKWGSSRLRTSSFVSTETLHRWTKIE
VNTKKESPTARSGHNVVLAGRKAYVFGGCANAALNDLHTLDMETLKWTEV
TPAGGDGAVVPSVRTCAAMCANDDGTALYLCGGAGDDPDDLRNDMYEFDT
RRSSWKLLYPAAPEICGAGVDGGGNVGAHGGGAGPGGDDAGQAACARIGH
SICYHATSGRLIVFGGSTGYEYFNDCFAFSLAEGRWFRLATAGDVPSPRY
KHRAVIHGDALFVVGGGAFEPSEAKLEVFKLDLVMLRWSHVACGGAIPKG
RAAHSLAFDKESAACYVWGGFTAGMELSQRLYKLDLRTARWEEVVCDASC
GVTPGGSGTGGDGSLSPTESSGGSRGSHGFGFGFGRRARAAAAATEGGGR
GGGGGAALQTSERPPARSFHGAVFYKGSHVVVGGSNGVHKMSDVWRYAVA
ETPPSLAALAGRAVVSAAEVGEIDLMWLPPEVQAGLNNINMLADKIF*
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mRNA from alignment at P-wetherbeei_contig1887:1497..4185-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1887.2.1 ID=mRNA_P-wetherbeei_contig1887.2.1|Name=mRNA_P-wetherbeei_contig1887.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2689bp|location=Sequence derived from alignment at P-wetherbeei_contig1887:1497..4185- (Phaeothamnion wetherbeei SAG_119_79)
AGTTTCTCGAGGCGCAAACCACGGCGCCCAAAGACTCCGAGAGTACCAAA ATACTCAAAGATAGAACCACGATGGCGCCACGCATATGCCATCCGGTTGT TCCGGTGCATGGATACGCCCCCGCGCTCCCGCGCGGGGGAAATTGGAAAT GGGGCAGCTCCCGGCTCCGAACGTCTAGCTTTGTCAGCACGGAGACTCTC CACCGCTGGACGAAGATAGAGGTCAACACGAAAAAGGAGAGCCCAACGGC GCGCAGCGGCCATAACGTGGTTCTCGCCGGCCGCAAAGCTTACGTCTTCG GCGGCTGTGCCAACGCCGCCCTCAACGACCTCCACACGCTCGACATGGAA ACACTCAAGTGGACGGAAGTGACTCCCGCCGGCGGCGACGGCGCCGTCGT CCCGAGCGTGCGAACGTGCGCGGCAATGTGCGCCAACGACGATGGCACCG CCCTCTACCTCTGCGGCGGCGCCGGCGACGACCCGGACGACCTCCGCAAC GACATGTACGAATTTGACACGCGCCGCAGCTCCTGGAAGCTCCTCTACCC CGCCGCCCCGGAGATTTGCGGCGCCGGTGTTGACGGCGGCGGCAATGTTG GCGCTCATGGCGGCGGTGCAGGACCGGGGGGGGACGACGCCGGTCAGGCG GCCTGCGCCCGCATCGGCCACAGCATCTGCTACCACGCCACGTCGGGCCG GCTGATCGTGTTTGGCGGGTCAACGGGCTACGAATACTTCAACGACTGCT TCGCCTTTTCTCTGGCGGAGGGTCGTTGGTTCCGCCTCGCCACGGCGGGC GACGTGCCGTCGCCGCGGTACAAGCACCGGGCGGTGATCCACGGCGACGC GCTCTTTGTGGTGGGCGGTGGGGCCTTCGAACCCTCGGAGGCCAAGCTAG AGGTGTTCAAGCTCGACCTCGTCATGCTGCGCTGGTCGCACGTCGCCTGC GGCGGCGCCATCCCCAAAGGTCGCGCCGCGCACAGGTCGGTGCTTTCGGT GGCTTCCCCGTTTTCATTATTATAGTTTTGCTGTTTTTGTAGCCAATGAT CCTTTATATTTCAATGTCATGCCAGAGATCGAAGTGGTTTGCGGGAGATC TAACTGCTTTTACGCGTGCCGACTCCTGCTCCGCCGAAACTTCTCAGATT CAGAAAAATTTGTCGTTAAGTGTCGCCGTTCCCAGCAATCCTTCCTTCTC CCCTCATTTCTCCCGTGTCCCAGCCTGGCGTTTGACAAGGAGAGCGCCGC GTGCTATGTGTGGGGCGGCTTCACCGCCGGCATGGAGCTTTCCCAGCGCT TATACAAGCTCGACCTGCGCACGGCACGCTGGGAGGAAGTCGTCTGTGAC GCCAGCTGTGGCGTGACGCCCGGTGGAAGCGGCACCGGCGGCGACGGCTC CCTCAGCCCCACCGAGTCCAGCGGTGGCTCACGCGGCTCGCATGGCTTTG GGTTTGGCTTCGGCCGCCGTGCGCGCGCCGCCGCGGCGGCGACCGAGGGC GGCGGCCGCGGCGGCGGAGGCGGGGCGGCGCTGCAGACCTCGGAGCGCCC GCCGGCGCGCAGCTTCCACGGCGCCGTGTTCTACAAGGGAAGCCATGTCG TTGTTGGCGGGAGCAACGGCGTGCACAAAATGTCCGACGTGTGGCGTTAC GCCGTCGCCGAGACACCGCCTTCGCTGGCGGCGCTTGCCGGCCGCGCCGT CGTGTCGGCGGCGGAGGTGGGGGAGATTGACCTCATGTGGCTGCCGCCAG AGGTGCAGGCCGGGCTGAACAACATCAACATGCTTGCTGACAAGATATTC TGATGGGCGCGCTCGTTTGCCGCCAGAGAGCGCGGCGGGCTTGCAAGTGC GGCGGCGGGGTCAGTGGCCGCGGCGGAGTGATGTGGCTAGGAGATTGAGA ATGTATAGGATTGATATGGACGATAGCGAGCCCGCCGAGGCGGCGTTGCC CCAGAGGGCGGCAATGCTGGCGTATGCGGCATGCAATCATTTCGGCGGCG CTACGAATGCGGCGATTGCAGCGATGTCATGGGCACAGCAATGCCTTGTC ACGGCGCGGCCATGGCAGCCGGGGTGCATTCTCCCGGGGCGCTGTGGATG CATCAGTTTATTTGGGGGGATAGATATGGCCACGAACGTGTACAGTCTGC CGAAAAGTGTGCAGCGCTGAGAGAATGGCACAGGCAACCAAAAATAATGG GGGAGGGGTGTGCCGAGTGGTGGAGGGGTGGCGTCCAGTCCGGAGAGGTG CGAATGCGCGTGTGCAAAGGCGCTTGCACGCCAACAGCGGCCTTGTGCGC GCGTAGAAGTGGTTGCGGGACGGCAACAACGATGGGGGAGATGGGGAGGA GAGGAATAGAGGCGGCGGCGGCGTGCCCGCCTGGTGCCCGCCGCCGCGGG CACAGCGGTGTCGGGAGATGCCGCTTCACCACGCCAGGATAGAAAATGTG GTGCGCGACGAGAGTCAATTGATTTGCCTGGGTCGGAGGGCTTATGCTCC CGCTCCGGGGCTCGGAAAAGGGCATTGCGGCGGGGAATAGCAGGGGCTGG GTAGGCATAGAGCGATTTACGGGCGAACGGAGAAGGAGCTAGTCGCGCCT GAGAGCGGCCGGCCGCTGTGCAGCGGCGGGCGTCAGGACCGGCGGTGAGG AGAAGGCATTGTCGAATCTAATGCGAGACATTTCACCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1887:1497..4185-

>mRNA_P-wetherbeei_contig1887.2.1 ID=mRNA_P-wetherbeei_contig1887.2.1|Name=mRNA_P-wetherbeei_contig1887.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1494bp|location=Sequence derived from alignment at P-wetherbeei_contig1887:1497..4185- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGCCACGCATATGCCATCCGGTTGTTCCGGTGCATGGATACGCCCC
CGCGCTCCCGCGCGGGGGAAATTGGAAATGGGGCAGCTCCCGGCTCCGAA
CGTCTAGCTTTGTCAGCACGGAGACTCTCCACCGCTGGACGAAGATAGAG
GTCAACACGAAAAAGGAGAGCCCAACGGCGCGCAGCGGCCATAACGTGGT
TCTCGCCGGCCGCAAAGCTTACGTCTTCGGCGGCTGTGCCAACGCCGCCC
TCAACGACCTCCACACGCTCGACATGGAAACACTCAAGTGGACGGAAGTG
ACTCCCGCCGGCGGCGACGGCGCCGTCGTCCCGAGCGTGCGAACGTGCGC
GGCAATGTGCGCCAACGACGATGGCACCGCCCTCTACCTCTGCGGCGGCG
CCGGCGACGACCCGGACGACCTCCGCAACGACATGTACGAATTTGACACG
CGCCGCAGCTCCTGGAAGCTCCTCTACCCCGCCGCCCCGGAGATTTGCGG
CGCCGGTGTTGACGGCGGCGGCAATGTTGGCGCTCATGGCGGCGGTGCAG
GACCGGGGGGGGACGACGCCGGTCAGGCGGCCTGCGCCCGCATCGGCCAC
AGCATCTGCTACCACGCCACGTCGGGCCGGCTGATCGTGTTTGGCGGGTC
AACGGGCTACGAATACTTCAACGACTGCTTCGCCTTTTCTCTGGCGGAGG
GTCGTTGGTTCCGCCTCGCCACGGCGGGCGACGTGCCGTCGCCGCGGTAC
AAGCACCGGGCGGTGATCCACGGCGACGCGCTCTTTGTGGTGGGCGGTGG
GGCCTTCGAACCCTCGGAGGCCAAGCTAGAGGTGTTCAAGCTCGACCTCG
TCATGCTGCGCTGGTCGCACGTCGCCTGCGGCGGCGCCATCCCCAAAGGT
CGCGCCGCGCACAGCCTGGCGTTTGACAAGGAGAGCGCCGCGTGCTATGT
GTGGGGCGGCTTCACCGCCGGCATGGAGCTTTCCCAGCGCTTATACAAGC
TCGACCTGCGCACGGCACGCTGGGAGGAAGTCGTCTGTGACGCCAGCTGT
GGCGTGACGCCCGGTGGAAGCGGCACCGGCGGCGACGGCTCCCTCAGCCC
CACCGAGTCCAGCGGTGGCTCACGCGGCTCGCATGGCTTTGGGTTTGGCT
TCGGCCGCCGTGCGCGCGCCGCCGCGGCGGCGACCGAGGGCGGCGGCCGC
GGCGGCGGAGGCGGGGCGGCGCTGCAGACCTCGGAGCGCCCGCCGGCGCG
CAGCTTCCACGGCGCCGTGTTCTACAAGGGAAGCCATGTCGTTGTTGGCG
GGAGCAACGGCGTGCACAAAATGTCCGACGTGTGGCGTTACGCCGTCGCC
GAGACACCGCCTTCGCTGGCGGCGCTTGCCGGCCGCGCCGTCGTGTCGGC
GGCGGAGGTGGGGGAGATTGACCTCATGTGGCTGCCGCCAGAGGTGCAGG
CCGGGCTGAACAACATCAACATGCTTGCTGACAAGATATTCTGA
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