mRNA_P-wetherbeei_contig18856.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18856.1.1
Unique NamemRNA_P-wetherbeei_contig18856.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A7C4XN79_9HYPH (N-formylglutamate amidohydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XN79_9HYPH)

HSP 1 Score: 357 bits (917), Expect = 1.010e-121
Identity = 175/253 (69.17%), Postives = 209/253 (82.61%), Query Frame = 1
Query:    1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
            SRLDA ALRKSEDC+VDELF GVA LGAPL++ARFPRAYLDVNREP+ELDP LFG+ LP +AN+QS+RVAGGLGTIARIVADGEEIY   P LAAALERIERLY PFHA+L EL+ +T+ARFG+A+L+DCHSMPSA+M+ SGS T+PDFVIGDRFG SCD R +R +R+ + +LGY   +NRPYAGG+ITE+YGRP+QG HA+Q+EINR+LYL+E  L P  RF  L  DL +L +RLF+   P    R AAE
Sbjct:   49 SRLDAHALRKSEDCFVDELFAGVARLGAPLIAARFPRAYLDVNREPYELDPLLFGEPLPPFANTQSMRVAGGLGTIARIVADGEEIYREPPPLAAALERIERLYKPFHASLHELITRTQARFGVALLVDCHSMPSASMSASGS-TKPDFVIGDRFGASCDPRASRAIREAIVQLGYQAHVNRPYAGGYITEHYGRPAQGVHAVQIEINRALYLNETSLQPTARFAKLQNDLTVLVQRLFSGMPPLIERRAAAE 300          
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A2W4TRQ2_9PROT (N-formylglutamate amidohydrolase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TRQ2_9PROT)

HSP 1 Score: 344 bits (883), Expect = 1.440e-116
Identity = 169/253 (66.80%), Postives = 203/253 (80.24%), Query Frame = 1
Query:    1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
            SRLDA  LRKSEDC+VDELF  VA LGAPL++ARFPRAYLDVNREP+ELDPELF + LP +AN+Q++RVAGGLGT+ARIVADGEEIY     LA A+ERIERLY PFHA++A +L++T+ RFG AIL+DCHSMPSA+M Q G G+RPDFVIGDRFG+SCD ++TRL R+ + + GY VQ+NRPYAGGFITE+YG+P +G HALQ+EINR LYL+E KLT    F  L  DL  +  R+FAE  P    R AAE
Sbjct:   48 SRLDAHTLRKSEDCFVDELFADVAKLGAPLIAARFPRAYLDVNREPYELDPELFAEPLPDFANTQTMRVAGGLGTVARIVADGEEIYDRPLPLAVAIERIERLYKPFHASIARILERTRRRFGAAILVDCHSMPSASMNQPG-GSRPDFVIGDRFGSSCDAKVTRLFREVIAQRGYQVQLNRPYAGGFITEHYGQPFKGVHALQIEINRGLYLNEEKLTRTANFDRLRHDLTQMMARIFAELPPLIAPRAAAE 299          
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A2W4L0H1_9PROT (N-formylglutamate amidohydrolase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4L0H1_9PROT)

HSP 1 Score: 343 bits (879), Expect = 5.830e-116
Identity = 170/253 (67.19%), Postives = 202/253 (79.84%), Query Frame = 1
Query:    1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
            SRLDA  LRKSEDC+VDELF  VA+LGAPL++ARFPRAYLDVNREP+ELDPELF + LP++AN+Q++RVAGGLGT+ARIVADGEEIY     L  A+ERIERLY PFHA +AELL++T  RFG+AIL+DCHSMPSA+M    SG RPDFVIGDRFG SCD ++TRL R+ +T  GY VQ+NRPYAGGFITE+YGRP +G HALQ+EINR LYL+E KLT    F  L ++L  +  R+FAE  P    R AAE
Sbjct:   48 SRLDAHTLRKSEDCFVDELFGDVASLGAPLIAARFPRAYLDVNREPYELDPELFDEPLPAFANTQTMRVAGGLGTLARIVADGEEIYREPLPLGVAMERIERLYKPFHARIAELLERTHRRFGVAILVDCHSMPSASMNHV-SGGRPDFVIGDRFGASCDAKVTRLFREIITHCGYQVQLNRPYAGGFITEHYGRPFKGIHALQIEINRGLYLNETKLTRTAGFDRLKRNLTQIMARIFAELPPILAPRAAAE 299          
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: UPI00036EF11C (N-formylglutamate amidohydrolase n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI00036EF11C)

HSP 1 Score: 339 bits (870), Expect = 1.360e-114
Identity = 170/253 (67.19%), Postives = 197/253 (77.87%), Query Frame = 1
Query:    1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
            SRLD + LRKSEDC+VDELF+G A LG PL+SA+FPRAYLDVNREP+ELDPELF   LP YANSQS+RV GGLGTIARIVADGEEIY T  ++  AL RIE+LY PFHA L EL+++T+A+FG AIL+DCHSMPSA MTQS SG RPDFVIGDRFG +CD RLTR +RD +   GY VQ+NRPYAGG+ITE+YGRP +G  A+QVEINR+LYLDER  TP  RF  L  DL   +  LF+        R AAE
Sbjct:   48 SRLDPLTLRKSEDCFVDELFQGAAELGVPLISAQFPRAYLDVNREPYELDPELFADPLPDYANSQSVRVVGGLGTIARIVADGEEIYRTRLSVDDALGRIEQLYFPFHAALEELIEQTRAQFGYAILVDCHSMPSAQMTQS-SGPRPDFVIGDRFGAACDPRLTRYLRDMLASEGYDVQLNRPYAGGYITEHYGRPYRGVQAVQVEINRALYLDERTFTPSRRFHRLKTDLTRFAAMLFSAIPAMIEQRAAAE 299          
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: V5SG31_9HYPH (N-formylglutamate amidohydrolase n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SG31_9HYPH)

HSP 1 Score: 334 bits (857), Expect = 1.200e-112
Identity = 167/253 (66.01%), Postives = 197/253 (77.87%), Query Frame = 1
Query:    1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
            SRLD M LRKSEDC+VDELFEG AALG PL+SA+FPRAYLDVNREP+ELDPELF   LP YANSQS+RV GGLGTIARIVADGEEIY +  ++  AL RI+ LY PFH  LAEL+ +TKA FG A+LIDCHSMPSA M QS SG RPDFVIGDRFG +CD +LTR +++ +T  GY V +NRPYAGG+ITE+YGRP +G HA+Q+EINR+LYL+E + TP   FQ L  DL  ++  LF+    A   R AAE
Sbjct:   46 SRLDPMTLRKSEDCFVDELFEGAAALGVPLISAQFPRAYLDVNREPYELDPELFADPLPDYANSQSVRVIGGLGTIARIVADGEEIYASRLSVEQALARIDHLYFPFHGALAELIAETKALFGYAVLIDCHSMPSAQMAQS-SGPRPDFVIGDRFGVACDPKLTRTLKEALTGSGYDVHLNRPYAGGYITEHYGRPLEGVHAVQIEINRALYLNEARFTPGRGFQRLKADLTRIAGTLFSTLPAALEQRAAAE 297          
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A2S5P9J8_HYPSQ (N-formylglutamate amidohydrolase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5P9J8_HYPSQ)

HSP 1 Score: 329 bits (844), Expect = 1.210e-110
Identity = 167/253 (66.01%), Postives = 196/253 (77.47%), Query Frame = 1
Query:    1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
            SRLD +ALRKSED YVDELF  VA  GAPL++ARFPRAYLD+NRE +ELDPELF   LP YAN++S+RV GGLGTIARIVADGEEIY     L  ALERIE+LY PFHA L  LL +T+A+FG +ILIDCHSMPSA+   SG+  RPDFV+GDRFG SCD RLTR  RD +T LGY VQ+NRPYAGG+ITE+YGRPS+  HALQ+EINR LYL+E  ++P   F  L + LMIL++RL  EF      R+AAE
Sbjct:   48 SRLDPLALRKSEDGYVDELFRHVAEFGAPLIAARFPRAYLDLNREAYELDPELFDTPLPDYANTRSVRVVGGLGTIARIVADGEEIYRERMPLGVALERIEQLYLPFHAALTRLLDETRAQFGYSILIDCHSMPSASSMPSGA-RRPDFVLGDRFGASCDSRLTRFTRDVLTGLGYDVQLNRPYAGGYITEHYGRPSRRAHALQIEINRGLYLEEATMSPTAGFVELERHLMILTRRLIKEFPLLIERRSAAE 299          
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A7C2R0H7_9HYPH (N-formylglutamate amidohydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2R0H7_9HYPH)

HSP 1 Score: 328 bits (840), Expect = 4.910e-110
Identity = 165/253 (65.22%), Postives = 194/253 (76.68%), Query Frame = 1
Query:    1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
            SRLDA  LRKSEDCYVDELFE V  LGAPL++ARFPRAYLDVNREP+ELDPELF  +LP +AN+QS RV GGLGTIARIVAD EEIY     + AA ERIERLY PFHA LA+LLQ T+ RFGIA+LIDCHSMPSA+  Q+  G RP FV+GDRFG SCD +LTR +RD +  +GY VQ+NRPYAGGFITE YG P++G  +LQ+EINR LYLDE  LT  P+F  L++ L  ++ ++FA        R AAE
Sbjct:   48 SRLDAHTLRKSEDCYVDELFEPVVGLGAPLIAARFPRAYLDVNREPYELDPELFTGRLPDFANTQSARVVGGLGTIARIVADTEEIYRERLPVGAAFERIERLYRPFHAALADLLQATRRRFGIAVLIDCHSMPSASSAQAAGG-RPHFVLGDRFGASCDAKLTRFIRDLLQGMGYEVQVNRPYAGGFITEYYGNPARGVQSLQLEINRGLYLDEATLTKGPQFPALARTLAEVAAKVFAALPLLLEKRAAAE 299          
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: UPI00093099F3 (N-formylglutamate amidohydrolase n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI00093099F3)

HSP 1 Score: 325 bits (834), Expect = 3.870e-109
Identity = 161/253 (63.64%), Postives = 190/253 (75.10%), Query Frame = 1
Query:    1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
            SRLD M LRKSEDC+VD+LF G A LG P+++ARFPRAYLDVNREP+ELDPELF   LP YANSQS+RV GGLGT+ARIVADGEEIY     +  AL RIE+LY PFH  L  L+ +TKARFG AILIDCHSMPSA M QS SG RPDFV+GDRFG +CD  LTR +RD +   GY VQ+NRPYAGG+ITE+YGRP +G  ALQ+EINR+LYLDE++ TP P F+ L  D+  +   + +        R AAE
Sbjct:   47 SRLDPMTLRKSEDCFVDDLFRGAAELGVPMIAARFPRAYLDVNREPYELDPELFADPLPDYANSQSVRVIGGLGTVARIVADGEEIYRERLCVEEALARIEQLYFPFHEALQSLIAETKARFGYAILIDCHSMPSAQMAQS-SGPRPDFVLGDRFGAACDPELTRFLRDTLAAEGYDVQLNRPYAGGYITEHYGRPYRGVQALQIEINRALYLDEQRFTPSPGFERLKTDITRIVNMMLSTVPGLLAKRDAAE 298          
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A2S5N035_HYPSQ (N-formylglutamate amidohydrolase n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A2S5N035_HYPSQ)

HSP 1 Score: 325 bits (832), Expect = 8.070e-109
Identity = 163/253 (64.43%), Postives = 195/253 (77.08%), Query Frame = 1
Query:    1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
            SRLDA ALR+SEDCYVDELF   A+ GA LLSARFPRAY+D NREP+ELDPELF + LP +AN++S+RVAGGLGTIARIVADGEEIY     L  AL RIE LY PFHA L  L+++ +  FG AILIDCHSMPSA M  + S  RPDFVIGDRFGTSCDLRLT+ +R  +T LGY  Q+NRPYAGG+ITE+YGRP +  HA+Q+EINR LY++E+ L   PRF  L +DL++ +K+LFAE       R+AAE
Sbjct:   48 SRLDATALRRSEDCYVDELFIRGASRGATLLSARFPRAYIDANREPYELDPELFSEPLPDWANARSVRVAGGLGTIARIVADGEEIYQEPLALQDALTRIELLYKPFHAALRSLIERAQRNFGYAILIDCHSMPSAHMAHA-SIQRPDFVIGDRFGTSCDLRLTKFIRSVLTDLGYEAQLNRPYAGGYITEHYGRPLRNVHAIQLEINRGLYMNEKTLEKTPRFIALERDLLLFAKQLFAEVPALLERRSAAE 299          
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Match: A0A1E4CW56_9HYPH (N-formylglutamate amidohydrolase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4CW56_9HYPH)

HSP 1 Score: 322 bits (825), Expect = 9.330e-108
Identity = 163/253 (64.43%), Postives = 193/253 (76.28%), Query Frame = 1
Query:    1 SRLDAMALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFGKKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYHPFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRFGTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQVEINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE 759
            SRL A +LRKSEDCYVD+LF GVAALGAPL++ARFPRAY+DVNREP+ELDPELF + LP++ANS+SIRVAGGLGTIAR+VAD EEIY     L  ALERIERLY PFH  LA L+  T  RFG A+LIDCHSMPS++    G   RPDFV+GDRFG SCD RLTR +R+++T LGY V +NRPYAGG+ITE YGRP +G HALQ+EINR+LYL+ER     P F ++ + L  +  RLF E       R AAE
Sbjct:   48 SRLTASSLRKSEDCYVDDLFAGVAALGAPLIAARFPRAYVDVNREPYELDPELFEETLPAFANSRSIRVAGGLGTIARVVADAEEIYKGRLPLTVALERIERLYKPFHGALASLIDATARRFGAAMLIDCHSMPSSSTGYVGP-QRPDFVLGDRFGASCDGRLTRFLREELTALGYTVHLNRPYAGGYITEYYGRPQRGLHALQIEINRALYLNERTFEKKPGFAVVERHLRTVVARLFNELPGMLGGREAAE 299          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18856.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4XN79_9HYPH1.010e-12169.17N-formylglutamate amidohydrolase n=1 Tax=Hyphomicr... [more]
A0A2W4TRQ2_9PROT1.440e-11666.80N-formylglutamate amidohydrolase n=1 Tax=Proteobac... [more]
A0A2W4L0H1_9PROT5.830e-11667.19N-formylglutamate amidohydrolase n=1 Tax=Proteobac... [more]
UPI00036EF11C1.360e-11467.19N-formylglutamate amidohydrolase n=1 Tax=Hyphomicr... [more]
V5SG31_9HYPH1.200e-11266.01N-formylglutamate amidohydrolase n=1 Tax=Hyphomicr... [more]
A0A2S5P9J8_HYPSQ1.210e-11066.01N-formylglutamate amidohydrolase n=1 Tax=Hyphomicr... [more]
A0A7C2R0H7_9HYPH4.910e-11065.22N-formylglutamate amidohydrolase n=1 Tax=Hyphomicr... [more]
UPI00093099F33.870e-10963.64N-formylglutamate amidohydrolase n=1 Tax=Hyphomicr... [more]
A0A2S5N035_HYPSQ8.070e-10964.43N-formylglutamate amidohydrolase n=2 Tax=unclassif... [more]
A0A1E4CW56_9HYPH9.330e-10864.43N-formylglutamate amidohydrolase n=2 Tax=Alphaprot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18856contigP-wetherbeei_contig18856:561..1322 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1267005.KB911256_gene1958
Preferred nameMA20_06380
PFAMsFGase
Model size762
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00165,RC00323
KEGG koko:K01458
KEGG ReactionR00525
KEGG Pathwayko00340,ko00630,map00340,map00630
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.99e-113
EggNOG OGsCOG3741@1|root,COG3741@2|Bacteria,1MY4D@1224|Proteobacteria,2TUPZ@28211|Alphaproteobacteria,3N6PW@45401|Hyphomicrobiaceae
EC3.5.1.68
DescriptionN-formylglutamate amidohydrolase
Cds size747
COG categoryE
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186156.927003-CDS-P-wetherbeei_contig18856:560..13071683186156.927003-CDS-P-wetherbeei_contig18856:560..1307Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18856 561..1307 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186156.9357584-UTR-P-wetherbeei_contig18856:1307..13221683186156.9357584-UTR-P-wetherbeei_contig18856:1307..1322Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig18856 1308..1322 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18856.1.1prot_P-wetherbeei_contig18856.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18856 561..1307 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18856.1.1

>prot_P-wetherbeei_contig18856.1.1 ID=prot_P-wetherbeei_contig18856.1.1|Name=mRNA_P-wetherbeei_contig18856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=249bp
MALRKSEDCYVDELFEGVAALGAPLLSARFPRAYLDVNREPFELDPELFG
KKLPSYANSQSIRVAGGLGTIARIVADGEEIYHTAPTLAAALERIERLYH
PFHATLAELLQKTKARFGIAILIDCHSMPSAAMTQSGSGTRPDFVIGDRF
GTSCDLRLTRLVRDQMTRLGYHVQMNRPYAGGFITENYGRPSQGFHALQV
EINRSLYLDERKLTPLPRFQMLSKDLMILSKRLFAEFTPAEPHRTAAE*
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mRNA from alignment at P-wetherbeei_contig18856:561..1322-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18856.1.1 ID=mRNA_P-wetherbeei_contig18856.1.1|Name=mRNA_P-wetherbeei_contig18856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig18856:561..1322- (Phaeothamnion wetherbeei SAG_119_79)
TCCCGGCTCGACGCCATGGCTCTGCGCAAGTCCGAAGATTGCTACGTCGA TGAACTGTTCGAAGGCGTTGCGGCTTTGGGAGCGCCACTCTTGTCGGCCC GGTTTCCCCGCGCTTACCTCGACGTCAATCGAGAGCCCTTCGAGCTCGAT CCCGAGCTTTTTGGCAAGAAATTGCCCAGTTACGCCAACTCCCAATCGAT CCGCGTCGCCGGCGGCCTGGGCACGATTGCGCGCATCGTGGCGGACGGTG AAGAGATCTATCACACCGCTCCGACGCTCGCTGCGGCCCTGGAGCGGATT GAACGGCTCTATCATCCCTTTCATGCGACGCTCGCCGAGCTATTGCAGAA AACCAAGGCGCGCTTTGGGATTGCCATCCTGATCGATTGCCATTCGATGC CGTCGGCCGCGATGACCCAATCGGGCTCGGGCACCCGCCCCGATTTCGTG ATCGGCGACCGCTTCGGCACCTCCTGCGACCTGAGGCTGACCCGGCTGGT GCGCGATCAGATGACGCGGTTGGGCTATCACGTGCAAATGAATCGGCCGT ACGCCGGCGGTTTCATCACGGAGAACTACGGTCGGCCGAGCCAGGGCTTT CATGCGCTGCAGGTCGAGATCAATCGATCGCTCTATCTGGACGAGCGCAA GCTGACGCCGTTGCCGCGTTTCCAGATGCTGAGCAAGGATCTGATGATTC TGAGCAAGCGCCTGTTTGCAGAGTTCACCCCGGCCGAACCGCACAGGACC GCCGCCGAATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18856:561..1322-

>mRNA_P-wetherbeei_contig18856.1.1 ID=mRNA_P-wetherbeei_contig18856.1.1|Name=mRNA_P-wetherbeei_contig18856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=747bp|location=Sequence derived from alignment at P-wetherbeei_contig18856:561..1322- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTCTGCGCAAGTCCGAAGATTGCTACGTCGATGAACTGTTCGAAGG
CGTTGCGGCTTTGGGAGCGCCACTCTTGTCGGCCCGGTTTCCCCGCGCTT
ACCTCGACGTCAATCGAGAGCCCTTCGAGCTCGATCCCGAGCTTTTTGGC
AAGAAATTGCCCAGTTACGCCAACTCCCAATCGATCCGCGTCGCCGGCGG
CCTGGGCACGATTGCGCGCATCGTGGCGGACGGTGAAGAGATCTATCACA
CCGCTCCGACGCTCGCTGCGGCCCTGGAGCGGATTGAACGGCTCTATCAT
CCCTTTCATGCGACGCTCGCCGAGCTATTGCAGAAAACCAAGGCGCGCTT
TGGGATTGCCATCCTGATCGATTGCCATTCGATGCCGTCGGCCGCGATGA
CCCAATCGGGCTCGGGCACCCGCCCCGATTTCGTGATCGGCGACCGCTTC
GGCACCTCCTGCGACCTGAGGCTGACCCGGCTGGTGCGCGATCAGATGAC
GCGGTTGGGCTATCACGTGCAAATGAATCGGCCGTACGCCGGCGGTTTCA
TCACGGAGAACTACGGTCGGCCGAGCCAGGGCTTTCATGCGCTGCAGGTC
GAGATCAATCGATCGCTCTATCTGGACGAGCGCAAGCTGACGCCGTTGCC
GCGTTTCCAGATGCTGAGCAAGGATCTGATGATTCTGAGCAAGCGCCTGT
TTGCAGAGTTCACCCCGGCCGAACCGCACAGGACCGCCGCCGAATAG
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