mRNA_P-wetherbeei_contig18842.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18842.1.1
Unique NamemRNA_P-wetherbeei_contig18842.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18842.1.1 vs. uniprot
Match: UPI0019BEC41F (SDR family oxidoreductase n=1 Tax=Rhizobacter sp. TaxID=1909292 RepID=UPI0019BEC41F)

HSP 1 Score: 326 bits (835), Expect = 5.670e-110
Identity = 164/253 (64.82%), Postives = 198/253 (78.26%), Query Frame = 1
Query:    1 MDLGLKGKGVIVTGASKGIGRAIALEFAREGANVAICARGSEALEATRAELAALGVKVFAATCDVGDATSLNGFLDNAEGVLGRVDVLVNNPSGFGVTDNEEGWAASLSVDVMAAVRATWKVVPWLEAQGGGAVIHISSISGLEASLPGVAAYAAAKASLISHSKTMAMELAPKNIRVNCVAPGSINFPGGFWENVKRDNPAFFDMVLSGIPFGRMGRPDEIANAVVFLASEKASWVSGAMLPVDGVQHKGNL 759
            MDLGLKGK VIVTG S+GIGR+ AL FA EGANVAICAR  EALE  RAE+AALGV  FA +CDVGDA +L  F+  A   LG +DVLVNNPSGFG+ D++EGWAA  +VD+MAAVRA+W VVPW+ A+GGGA++HI+SISG+E S   +  YAA KA++ISHSK++A+ LA KNIRVNCV+PGS+ FPGG WE  K +    ++  L GIPF RMGRP+EIA AVVF AS  ASW++G  LPVDG QH+GNL
Sbjct:    1 MDLGLKGKNVIVTGGSRGIGRSTALAFAAEGANVAICARNPEALERARAEIAALGVSAFAQSCDVGDAAALTAFMQAANDALGGIDVLVNNPSGFGMADSDEGWAAGFNVDMMAAVRASWLVVPWMAARGGGAIVHIASISGMEGSTRSIP-YAAVKAAMISHSKSLALSLASKNIRVNCVSPGSVEFPGGVWEQRKLEGAPVYEATLKGIPFQRMGRPEEIAAAVVFCASAPASWLTGVNLPVDGGQHRGNL 252          
BLAST of mRNA_P-wetherbeei_contig18842.1.1 vs. uniprot
Match: UPI0012EB7DE0 (SDR family oxidoreductase n=1 Tax=Casimicrobium huifangae TaxID=2591109 RepID=UPI0012EB7DE0)

HSP 1 Score: 323 bits (828), Expect = 6.570e-109
Identity = 166/253 (65.61%), Postives = 200/253 (79.05%), Query Frame = 1
Query:    1 MDLGLKGKGVIVTGASKGIGRAIALEFAREGANVAICARGSEALEATRAELAALGVKVFAATCDVGDATSLNGFLDNAEGVLGRVDVLVNNPSGFGVTDNEEGWAASLSVDVMAAVRATWKVVPWLEAQGGGAVIHISSISGLEASLPGVAAYAAAKASLISHSKTMAMELAPKNIRVNCVAPGSINFPGGFWENVKRDNPAFFDMVLSGIPFGRMGRPDEIANAVVFLASEKASWVSGAMLPVDGVQHKGNL 759
            MDLGLKGK VIVTG S+GIGR+IAL FA EGANVAICARG +AL + R EL A GV  FA +CDVGDA +L  FLD A   LG VDVLVNNPSGFG+ D+EE W+   +VD+MAAVRA+ +VVPW+EA+GGGA++HISSISG+E +    AAYAA KA++ISHSK++A+ LAPKNIRVNCV+PGS+ FPGG W+  KRD    ++ + +GIPF R+GRP+EIA AVVF AS  ASWVSG  LPVDG QH+ NL
Sbjct:    1 MDLGLKGKNVIVTGGSRGIGRSIALAFADEGANVAICARGMDALASVRDELTARGVTAFAQSCDVGDAAALAAFLDAANAALGGVDVLVNNPSGFGLGDSEEAWSLGFNVDMMAAVRASRQVVPWMEARGGGAIVHISSISGMEGTTR-QAAYAAMKAAMISHSKSLALTLAPKNIRVNCVSPGSVEFPGGLWDQRKRDGSPLYEAIRTGIPFQRLGRPEEIAAAVVFCASAPASWVSGVNLPVDGGQHRANL 252          
BLAST of mRNA_P-wetherbeei_contig18842.1.1 vs. uniprot
Match: A0A2D7I4V5_9DELT (3-ketoacyl-ACP reductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D7I4V5_9DELT)

HSP 1 Score: 320 bits (821), Expect = 7.360e-108
Identity = 165/253 (65.22%), Postives = 195/253 (77.08%), Query Frame = 1
Query:    1 MDLGLKGKGVIVTGASKGIGRAIALEFAREGANVAICARGSEALEATRAELAALGVKVFAATCDVGDATSLNGFLDNAEGVLGRVDVLVNNPSGFGVTDNEEGWAASLSVDVMAAVRATWKVVPWLEAQGGGAVIHISSISGLEASLPGVAAYAAAKASLISHSKTMAMELAPKNIRVNCVAPGSINFPGGFWENVKRDNPAFFDMVLSGIPFGRMGRPDEIANAVVFLASEKASWVSGAMLPVDGVQHKGNL 759
            MDL LKGKGVIVTGASKGIGR+IAL FAREGAN+AICARG +AL  T  E++ALGVKV A  CDV D ++LN FLD ++  LG+++VLVNN SGFGV+D+E+GW     VDVMA+VRATW+V PWL    GG++IHISS S LEA  P   AYAA KA+LISHSKTMA  LAP  I VNCVAPGSI FPGG WE  K   P  +  + + IPFGR+G P+E+A AV+FLAS++ASW+SG  L VDGVQHKGNL
Sbjct:    1 MDLNLKGKGVIVTGASKGIGRSIALGFAREGANLAICARGEDALSKTAEEVSALGVKVHAEVCDVSDESALNHFLDASQTALGQINVLVNNTSGFGVSDDEQGWKTGFDVDVMASVRATWRVTPWLREAEGGSIIHISSTSALEAGSP--PAYAAVKAALISHSKTMANTLAPFGIXVNCVAPGSIEFPGGMWETXKNVAPKQYQAIQNSIPFGRLGTPEEVAXAVIFLASDQASWISGVTLSVDGVQHKGNL 251          
BLAST of mRNA_P-wetherbeei_contig18842.1.1 vs. uniprot
Match: A0A3R7SU88_9PROT (SDR family oxidoreductase n=2 Tax=Bacteria TaxID=2 RepID=A0A3R7SU88_9PROT)

HSP 1 Score: 320 bits (819), Expect = 1.480e-107
Identity = 163/253 (64.43%), Postives = 195/253 (77.08%), Query Frame = 1
Query:    1 MDLGLKGKGVIVTGASKGIGRAIALEFAREGANVAICARGSEALEATRAELAALGVKVFAATCDVGDATSLNGFLDNAEGVLGRVDVLVNNPSGFGVTDNEEGWAASLSVDVMAAVRATWKVVPWLEAQGGGAVIHISSISGLEASLPGVAAYAAAKASLISHSKTMAMELAPKNIRVNCVAPGSINFPGGFWENVKRDNPAFFDMVLSGIPFGRMGRPDEIANAVVFLASEKASWVSGAMLPVDGVQHKGNL 759
            MDLGLK K +I+TGASKGIGR+IAL FA+EGA++A+CARG EAL AT  E+  LGV V A TCDV D  +L+GFL+ ++  LG VD+L+NN SGFGV+D+E GW     VDVMA+VRATWKVVPW++   GG+VIHISS S LEA  P    YAAAKA+LISHSKT+A  LAP  IRVNCVAPGSI FPGG WE +K   P  +  +   IPFGR+G P+E+ANAV+FLASE+ASW+SG  L VDGVQHKGNL
Sbjct:    1 MDLGLKDKKIIITGASKGIGRSIALGFAQEGAHIALCARGEEALGATADEIRELGVNVHAETCDVSDKEALDGFLEASQAALGGVDILINNTSGFGVSDDEAGWQMGFDVDVMASVRATWKVVPWMQEAKGGSVIHISSTSALEAGSP--PPYAAAKAALISHSKTLANNLAPFGIRVNCVAPGSIEFPGGMWETIKNVAPDQYGAIQDSIPFGRLGTPEEVANAVIFLASERASWISGVTLSVDGVQHKGNL 251          
BLAST of mRNA_P-wetherbeei_contig18842.1.1 vs. uniprot
Match: A0A523NVI5_9PROT (SDR family oxidoreductase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NVI5_9PROT)

HSP 1 Score: 319 bits (817), Expect = 2.990e-107
Identity = 162/251 (64.54%), Postives = 195/251 (77.69%), Query Frame = 1
Query:    1 MDLGLKGKGVIVTGASKGIGRAIALEFAREGANVAICARGSEALEATRAELAALGVKVFAATCDVGDATSLNGFLDNAEGVLGRVDVLVNNPSGFGVTDNEEGWAASLSVDVMAAVRATWKVVPWLEAQGGGAVIHISSISGLEASLPGVAAYAAAKASLISHSKTMAMELAPKNIRVNCVAPGSINFPGGFWENVKRDNPAFFDMVLSGIPFGRMGRPDEIANAVVFLASEKASWVSGAMLPVDGVQHKG 753
            MDLGL GK  I+TGAS+GIGRA ALEFA EGANVAICARG EAL+ TR+EL A GV V AA CDV D  SL  FL+ A   LG +D+LVNNPSGFG+TD+E GW ASL+VD+MA VRA+W+VVPW+ A+GGGA++HISSI+GLE+  P   AY+  KA LI+H+KT+A +LA + IRVN +APGSI FPGGFWE +K +N   +D  L+ IPFGRMG   E+A  +VF+AS KASWVSGA L VD VQHKG
Sbjct:    1 MDLGLAGKNAIITGASRGIGRATALEFAAEGANVAICARGHEALDNTRSELEAKGVNVHAAICDVSDPGSLKSFLNGANDALGGIDILVNNPSGFGLTDDEAGWEASLNVDLMATVRASWQVVPWMAARGGGAIVHISSIAGLESGSP--PAYSTVKAGLIAHAKTLAAQLASQRIRVNTIAPGSIEFPGGFWEMIKAENREMYDATLATIPFGRMGTAQEVATTIVFIASPKASWVSGATLLVDAVQHKG 249          
BLAST of mRNA_P-wetherbeei_contig18842.1.1 vs. uniprot
Match: A0A523IIG0_9DELT (SDR family oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523IIG0_9DELT)

HSP 1 Score: 316 bits (809), Expect = 4.910e-106
Identity = 160/253 (63.24%), Postives = 192/253 (75.89%), Query Frame = 1
Query:    1 MDLGLKGKGVIVTGASKGIGRAIALEFAREGANVAICARGSEALEATRAELAALGVKVFAATCDVGDATSLNGFLDNAEGVLGRVDVLVNNPSGFGVTDNEEGWAASLSVDVMAAVRATWKVVPWLEAQGGGAVIHISSISGLEASLPGVAAYAAAKASLISHSKTMAMELAPKNIRVNCVAPGSINFPGGFWENVKRDNPAFFDMVLSGIPFGRMGRPDEIANAVVFLASEKASWVSGAMLPVDGVQHKGNL 759
            M LGLK KG IVTGAS+GIGRA AL FA EG +VAICARG+E L  T AEL   GVK +A TCDVG A  L  FL+ +   LGRVDVLVNN SGFGVTD+E GW+    VD+MAAVR  W+V+PW+E  G G+++HI+S SGLEA  P   AYAAAKA+LISHSKT+A+ELAP+ IRVNCVAPGSI FPGG WE ++R++P  +  + + IP GR+G   E+ANAV+FLASE ASW++G  L VDG QHKGNL
Sbjct:    1 MKLGLKDKGAIVTGASRGIGRATALAFADEGCHVAICARGTEQLRTTEAELRQRGVKAYAQTCDVGQAHELEAFLNASRAALGRVDVLVNNASGFGVTDDEGGWSVGFQVDIMAAVRGVWQVLPWMEEAGSGSIVHIASTSGLEAGSP--PAYAAAKAALISHSKTLAIELAPRGIRVNCVAPGSIEFPGGLWETIQRNSPQRYQAIRASIPSGRLGTDTEVANAVIFLASEAASWITGVTLSVDGGQHKGNL 251          
BLAST of mRNA_P-wetherbeei_contig18842.1.1 vs. uniprot
Match: A0A2D6BUM0_9DELT (3-ketoacyl-ACP reductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BUM0_9DELT)

HSP 1 Score: 311 bits (798), Expect = 2.310e-104
Identity = 162/253 (64.03%), Postives = 189/253 (74.70%), Query Frame = 1
Query:    1 MDLGLKGKGVIVTGASKGIGRAIALEFAREGANVAICARGSEALEATRAELAALGVKVFAATCDVGDATSLNGFLDNAEGVLGRVDVLVNNPSGFGVTDNEEGWAASLSVDVMAAVRATWKVVPWLEAQGGGAVIHISSISGLEASLPGVAAYAAAKASLISHSKTMAMELAPKNIRVNCVAPGSINFPGGFWENVKRDNPAFFDMVLSGIPFGRMGRPDEIANAVVFLASEKASWVSGAMLPVDGVQHKGNL 759
            MDLGL GK V+VTGASKGIGRA AL FA EGANVAICAR +  LE    E+ + GV+ F A CDV D  +L  F D A+  LG VDVLVNN SGFGV D+E GW+A  +VD+MAAVR TWKVVPW+   GGG+VIHISS SGLEA  P   AYAA KA+L+SHSKT+A+ LAPKNIRVNCVAPGSI FPGG WE +K+ N   ++ + S IPFGR+G  +E+A  VVFLAS  ASW++G  L VDG QHKGNL
Sbjct:    1 MDLGLAGKNVVVTGASKGIGRATALAFADEGANVAICARSAGPLEEAVKEIESRGVQAFGAPCDVSDGDALGAFFDAAKEALGGVDVLVNNASGFGVNDDEAGWSAGFNVDMMAAVRGTWKVVPWMAEAGGGSVIHISSTSGLEAGSP--PAYAAVKAALVSHSKTVAINLAPKNIRVNCVAPGSIEFPGGMWETIKKVNTPMYEGIRSSIPFGRLGSAEEVAAVVVFLASAPASWITGVTLCVDGGQHKGNL 251          
BLAST of mRNA_P-wetherbeei_contig18842.1.1 vs. uniprot
Match: UPI001B23BC73 (SDR family oxidoreductase n=1 Tax=Paraburkholderia domus TaxID=2793075 RepID=UPI001B23BC73)

HSP 1 Score: 309 bits (792), Expect = 1.890e-103
Identity = 157/251 (62.55%), Postives = 196/251 (78.09%), Query Frame = 1
Query:    1 MDLGLKGKGVIVTGASKGIGRAIALEFAREGANVAICARGSEALEATRAELAALGVKVFAATCDVGDATSLNGFLDNAEGVLGRVDVLVNNPSGFGVTDNEEGWAASLSVDVMAAVRATWKVVPWLEAQGGGAVIHISSISGLEASLPGVAAYAAAKASLISHSKTMAMELAPKNIRVNCVAPGSINFPGGFWENVKRDNPAFFDMVLSGIPFGRMGRPDEIANAVVFLASEKASWVSGAMLPVDGVQHKG 753
            MDLGL GK V++TGAS+GIGRAIAL FAREGA+VAICARG  AL AT AEL ALGV V+AA CDV D   L+ FL  +  +LG VDVLVNNPSGFGVTD+EEGW     VDVMA+VRA+W+V PW+E+ G G+++HISSI+ LEA    +  YAAAKA+L++HSK MA  LAPK IR+N VAPGSI FP G+W+  ++ +P  ++ + S +PFGR+G P+E+A AVVF+AS +ASW++GAML VDG QHKG
Sbjct:    1 MDLGLNGKNVVITGASRGIGRAIALAFAREGASVAICARGESALMATAAELNALGVNVYAAGCDVADRGDLDAFLVASRAMLGGVDVLVNNPSGFGVTDDEEGWLVGWEVDVMASVRASWRVAPWMESSGWGSIVHISSIAALEAGP--IPPYAAAKAALLAHSKNMATLLAPKGIRINVVAPGSIEFPDGYWDRERQRDPIAYETMRSAMPFGRLGTPEEVAAAVVFVASPRASWIAGAMLVVDGAQHKG 249          
BLAST of mRNA_P-wetherbeei_contig18842.1.1 vs. uniprot
Match: A0A2V8M1R8_9BACT (3-ketoacyl-ACP reductase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8M1R8_9BACT)

HSP 1 Score: 306 bits (783), Expect = 4.400e-102
Identity = 158/253 (62.45%), Postives = 191/253 (75.49%), Query Frame = 1
Query:    1 MDLGLKGKGVIVTGASKGIGRAIALEFAREGANVAICARGSEALEATRAELAALGVKVFAATCDVGDATSLNGFLDNAEGVLGRVDVLVNNPSGFGVTDNEEGWAASLSVDVMAAVRATWKVVPWLEAQGGGAVIHISSISGLEASLPGVAAYAAAKASLISHSKTMAMELAPKNIRVNCVAPGSINFPGGFWENVKRDNPAFFDMVLSGIPFGRMGRPDEIANAVVFLASEKASWVSGAMLPVDGVQHKGNL 759
            MDLGL GK  +VTG S+GIGRAIAL FA+EGANVAICAR  EALE T +EL   GVKV A +CDV D  +L+ FL+ A   LGR+D+LVNN S FG  D+E GW  S   DVMAAVRA WKVVPW++   GG ++HISS+SGLE       AY+AAKA+L+SHSKT+A+ LAP  IRVN V  GSI FPGG W+ VKR+N + +D VLSGIP GRMG  +E+ANAVVFLAS++ASW++GA + VDG QH+GNL
Sbjct:    1 MDLGLGGKNAVVTGGSRGIGRAIALGFAQEGANVAICARAKEALEKTASELRETGVKVSAVSCDVADPKALDAFLEEARNALGRIDILVNNVSAFGQADDENGWKDSFDKDVMAAVRAVWKVVPWMKHSAGGTIVHISSVSGLEGGWS--PAYSAAKAALVSHSKTLAITLAPFKIRVNVVTLGSIEFPGGGWDKVKRNNRSRYDAVLSGIPSGRMGTAEEVANAVVFLASDRASWITGACVSVDGGQHRGNL 251          
BLAST of mRNA_P-wetherbeei_contig18842.1.1 vs. uniprot
Match: A0A3D0I7M5_9DELT (3-oxoacyl-ACP reductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D0I7M5_9DELT)

HSP 1 Score: 305 bits (782), Expect = 5.630e-102
Identity = 157/248 (63.31%), Postives = 188/248 (75.81%), Query Frame = 1
Query:    1 MDLGLKGKGVIVTGASKGIGRAIALEFAREGANVAICARGSEALEATRAELAALGVKVFAATCDVGDATSLNGFLDNAEGVLGRVDVLVNNPSGFGVTDNEEGWAASLSVDVMAAVRATWKVVPWLEAQGGGAVIHISSISGLEASLPGVAAYAAAKASLISHSKTMAMELAPKNIRVNCVAPGSINFPGGFWENVKRDNPAFFDMVLSGIPFGRMGRPDEIANAVVFLASEKASWVSGAMLPVDGVQ 744
            MDLG  GKGVIVTG+SKGIGR++AL FAREGA+VAICARG+EALE T  EL+ALG KV +ATCDV D  SL  FLD A   LGRV VLVNN SGFGV DNE+GW     VD+MA VRATW+V PW+   GGGA+++ISSISGLEA +     Y A KA++ISH+K+MA  LA KNIRVN +APG+I FPGG W  +K  NP  ++  + GIPF R+G P+E+ANAVVFLAS+ ASW++G  L VDG Q
Sbjct:    1 MDLGFTGKGVIVTGSSKGIGRSVALAFAREGAHVAICARGAEALERTAGELSALGAKVHSATCDVSDKASLERFLDGARDALGRVHVLVNNASGFGVMDNEQGWDQGFKVDMMATVRATWRVAPWMAEGGGGAIVNISSISGLEAGI--TVPYGAVKAAVISHAKSMARTLAGKNIRVNAIAPGAIEFPGGSWAAIKSMNPKMYEATMKGIPFKRLGTPEEVANAVVFLASDAASWITGHTLVVDGGQ 246          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18842.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019BEC41F5.670e-11064.82SDR family oxidoreductase n=1 Tax=Rhizobacter sp. ... [more]
UPI0012EB7DE06.570e-10965.61SDR family oxidoreductase n=1 Tax=Casimicrobium hu... [more]
A0A2D7I4V5_9DELT7.360e-10865.223-ketoacyl-ACP reductase n=1 Tax=Deltaproteobacter... [more]
A0A3R7SU88_9PROT1.480e-10764.43SDR family oxidoreductase n=2 Tax=Bacteria TaxID=2... [more]
A0A523NVI5_9PROT2.990e-10764.54SDR family oxidoreductase n=1 Tax=Proteobacteria b... [more]
A0A523IIG0_9DELT4.910e-10663.24SDR family oxidoreductase n=1 Tax=Deltaproteobacte... [more]
A0A2D6BUM0_9DELT2.310e-10464.033-ketoacyl-ACP reductase n=1 Tax=Deltaproteobacter... [more]
UPI001B23BC731.890e-10362.55SDR family oxidoreductase n=1 Tax=Paraburkholderia... [more]
A0A2V8M1R8_9BACT4.400e-10262.453-ketoacyl-ACP reductase n=1 Tax=Acidobacteria bac... [more]
A0A3D0I7M5_9DELT5.630e-10263.313-oxoacyl-ACP reductase n=1 Tax=Deltaproteobacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18842contigP-wetherbeei_contig18842:97..858 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog313595.P700755_003210
PFAMsadh_short,adh_short_C2
Model size762
Max annot lvl976|Bacteroidetes
KEGG rclassRC00029,RC00117
KEGG koko:K00059
KEGG ReactionR04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671
KEGG Pathwayko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212
KEGG ModuleM00083,M00572
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.17e-89
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,4NGR3@976|Bacteroidetes,1I8DJ@117743|Flavobacteriia,4C4B9@83612|Psychroflexus
EC1.1.1.100
DescriptionKR domain
Cds size762
COG categoryIQ
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186156.636327-CDS-P-wetherbeei_contig18842:96..8581683186156.636327-CDS-P-wetherbeei_contig18842:96..858Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18842 97..858 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18842.1.1prot_P-wetherbeei_contig18842.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18842 97..858 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18842.1.1

>prot_P-wetherbeei_contig18842.1.1 ID=prot_P-wetherbeei_contig18842.1.1|Name=mRNA_P-wetherbeei_contig18842.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=254bp
MDLGLKGKGVIVTGASKGIGRAIALEFAREGANVAICARGSEALEATRAE
LAALGVKVFAATCDVGDATSLNGFLDNAEGVLGRVDVLVNNPSGFGVTDN
EEGWAASLSVDVMAAVRATWKVVPWLEAQGGGAVIHISSISGLEASLPGV
AAYAAAKASLISHSKTMAMELAPKNIRVNCVAPGSINFPGGFWENVKRDN
PAFFDMVLSGIPFGRMGRPDEIANAVVFLASEKASWVSGAMLPVDGVQHK
GNL*
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mRNA from alignment at P-wetherbeei_contig18842:97..858-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18842.1.1 ID=mRNA_P-wetherbeei_contig18842.1.1|Name=mRNA_P-wetherbeei_contig18842.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig18842:97..858- (Phaeothamnion wetherbeei SAG_119_79)
ATGGATCTCGGACTCAAGGGCAAGGGCGTCATCGTTACCGGCGCCAGCAA GGGCATAGGGCGCGCCATCGCGCTGGAATTCGCGCGTGAGGGCGCAAATG TCGCGATCTGCGCGCGCGGCAGCGAAGCACTGGAAGCGACCCGCGCTGAA CTGGCGGCGCTGGGTGTGAAGGTGTTCGCGGCGACCTGCGATGTCGGCGA CGCCACCTCCCTCAATGGCTTTCTGGATAACGCGGAAGGGGTGCTCGGCC GCGTCGACGTGCTGGTCAATAACCCGTCCGGCTTTGGTGTCACCGACAAC GAAGAAGGCTGGGCGGCGAGCCTGTCGGTGGACGTGATGGCGGCGGTACG CGCGACCTGGAAGGTGGTGCCTTGGCTCGAAGCTCAGGGCGGCGGCGCGG TCATACATATCAGCTCGATCTCGGGTCTCGAAGCGAGCCTGCCCGGGGTC GCGGCCTACGCGGCGGCCAAGGCCAGCCTCATCAGTCATTCCAAGACCAT GGCGATGGAACTCGCGCCGAAGAACATCCGCGTCAATTGCGTGGCTCCGG GCTCGATCAACTTCCCCGGCGGCTTCTGGGAAAACGTCAAGCGCGACAAT CCGGCGTTCTTCGACATGGTGTTATCCGGCATCCCTTTCGGTCGCATGGG CCGGCCGGATGAAATTGCCAATGCCGTGGTGTTCCTGGCGTCGGAAAAAG CGAGCTGGGTATCGGGCGCGATGCTGCCGGTGGATGGGGTGCAGCATAAG GGCAATTTGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18842:97..858-

>mRNA_P-wetherbeei_contig18842.1.1 ID=mRNA_P-wetherbeei_contig18842.1.1|Name=mRNA_P-wetherbeei_contig18842.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig18842:97..858- (Phaeothamnion wetherbeei SAG_119_79)
ATGGATCTCGGACTCAAGGGCAAGGGCGTCATCGTTACCGGCGCCAGCAA
GGGCATAGGGCGCGCCATCGCGCTGGAATTCGCGCGTGAGGGCGCAAATG
TCGCGATCTGCGCGCGCGGCAGCGAAGCACTGGAAGCGACCCGCGCTGAA
CTGGCGGCGCTGGGTGTGAAGGTGTTCGCGGCGACCTGCGATGTCGGCGA
CGCCACCTCCCTCAATGGCTTTCTGGATAACGCGGAAGGGGTGCTCGGCC
GCGTCGACGTGCTGGTCAATAACCCGTCCGGCTTTGGTGTCACCGACAAC
GAAGAAGGCTGGGCGGCGAGCCTGTCGGTGGACGTGATGGCGGCGGTACG
CGCGACCTGGAAGGTGGTGCCTTGGCTCGAAGCTCAGGGCGGCGGCGCGG
TCATACATATCAGCTCGATCTCGGGTCTCGAAGCGAGCCTGCCCGGGGTC
GCGGCCTACGCGGCGGCCAAGGCCAGCCTCATCAGTCATTCCAAGACCAT
GGCGATGGAACTCGCGCCGAAGAACATCCGCGTCAATTGCGTGGCTCCGG
GCTCGATCAACTTCCCCGGCGGCTTCTGGGAAAACGTCAAGCGCGACAAT
CCGGCGTTCTTCGACATGGTGTTATCCGGCATCCCTTTCGGTCGCATGGG
CCGGCCGGATGAAATTGCCAATGCCGTGGTGTTCCTGGCGTCGGAAAAAG
CGAGCTGGGTATCGGGCGCGATGCTGCCGGTGGATGGGGTGCAGCATAAG
GGCAATTTGTAG
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