mRNA_P-wetherbeei_contig18821.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18821.2.1 vs. uniprot
Match: UPI001E344E28 (type II toxin-antitoxin system prevent-host-death family antitoxin n=1 Tax=Gloeobacter morelensis TaxID=2907343 RepID=UPI001E344E28) HSP 1 Score: 88.2 bits (217), Expect = 4.600e-20 Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 1
Query: 7 EEVLITRRGKPVARLVPAEPVFDREKARRAVEGIRETRKGLTPGGLKIKDLINEGRP 177
EEVLITRRGK VARLVPAE FDR KA RA+EGI E R+G+T GGLKIKDL+NEGRP
Sbjct: 24 EEVLITRRGKAVARLVPAEVGFDRAKAHRALEGILEARRGITLGGLKIKDLVNEGRP 80
BLAST of mRNA_P-wetherbeei_contig18821.2.1 vs. uniprot
Match: A0A537QRE5_9PROT (Type II toxin-antitoxin system VapC family toxin n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QRE5_9PROT) HSP 1 Score: 89.4 bits (220), Expect = 1.040e-19 Identity = 49/110 (44.55%), Postives = 66/110 (60.00%), Query Frame = 3
Query: 144 QDQGFDQ*RSTVTFVLDSSVSLSWCFDDGFTGATGALMER-------------------------RRRIDSAKRVRHIEFLRDLPVAIDADTVSQAWTVTSQLAERHRLT 398
QDQG DQ R+ V+FVLD+SV+L+WCF+D T AT AL+ER R R+D+++R R FL LP+++DA+T SQAWT T+ LAER L+
Sbjct: 3 QDQGSDQRRAVVSFVLDNSVALTWCFEDERTPATTALLERVGEAGALAPGLWPLEALNGLLVAERRGRLDASRRQRLAGFLHALPISLDAETASQAWTTTAGLAERFALS 112
BLAST of mRNA_P-wetherbeei_contig18821.2.1 vs. uniprot
Match: A0A369XLQ5_9PROT (Ribonuclease VapC n=1 Tax=Candidatus Accumulibacter phosphatis TaxID=327160 RepID=A0A369XLQ5_9PROT) HSP 1 Score: 89.0 bits (219), Expect = 1.050e-19 Identity = 52/100 (52.00%), Postives = 59/100 (59.00%), Query Frame = 3
Query: 177 VTFVLDSSVSLSWCFDDGFTGATGALMER-------------------------RRRIDSAKRVRHIEFLRDLPVAIDADTVSQAWTVTSQLAERHRLTL 401
++FVLDSSVSLSWCFDD T AT AL+ER RRRID+ R R FL DLPVAID +T SQAW VT+QLA R RLT+
Sbjct: 1 MSFVLDSSVSLSWCFDDERTDATDALLERIVESGADAPALWPLEVLNALAMAERRRRIDAEHRQRLAGFLCDLPVAIDEETASQAWAVTAQLAARFRLTV 100
BLAST of mRNA_P-wetherbeei_contig18821.2.1 vs. uniprot
Match: A0A369XJS6_9PROT (Antitoxin n=1 Tax=Candidatus Accumulibacter phosphatis TaxID=327160 RepID=A0A369XJS6_9PROT) HSP 1 Score: 87.0 bits (214), Expect = 1.300e-19 Identity = 43/57 (75.44%), Postives = 49/57 (85.96%), Query Frame = 1
Query: 7 EEVLITRRGKPVARLVPAEPVFDREKARRAVEGIRETRKGLTPGGLKIKDLINEGRP 177
EEVLITRRGK VARLVPAEP FDR KARRA +G+ + R+ +T GGLKIKDL+NEGRP
Sbjct: 24 EEVLITRRGKAVARLVPAEPGFDRAKARRAADGLLDARRDVTLGGLKIKDLVNEGRP 80
BLAST of mRNA_P-wetherbeei_contig18821.2.1 vs. uniprot
Match: A0A537QRI4_9PROT (Antitoxin n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QRI4_9PROT) HSP 1 Score: 79.3 bits (194), Expect = 1.330e-16 Identity = 41/58 (70.69%), Postives = 48/58 (82.76%), Query Frame = 1
Query: 1 RREEVLITRRGKPVARLVPAEPVFDREKARRAVEGIRETRKGLTPGGLKIKDLINEGR 174
R EE++ITRRGKPVA+LVPA P FDR KARRAV G+ E +G+T G LKIKDLI+EGR
Sbjct: 22 RGEEIVITRRGKPVAKLVPAGPDFDRAKARRAVAGLLEASRGVTLGCLKIKDLISEGR 79
BLAST of mRNA_P-wetherbeei_contig18821.2.1 vs. uniprot
Match: UPI001BACA007 (type II toxin-antitoxin system prevent-host-death family antitoxin n=1 Tax=Caulobacter sp. S6 TaxID=2823693 RepID=UPI001BACA007) HSP 1 Score: 79.0 bits (193), Expect = 1.880e-16 Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 1
Query: 10 EVLITRRGKPVARLVPAEPVFDREKARRAVEGIRETRKGLTPGGLKIKDLINEGR 174
EV+ITRRGKP+ARLVPAE F+R+KARRA EG+R KG T GGL I+DLI+EGR
Sbjct: 25 EVMITRRGKPIARLVPAETGFNRDKARRAAEGLRTASKGQTLGGLSIRDLIDEGR 79
BLAST of mRNA_P-wetherbeei_contig18821.2.1 vs. uniprot
Match: A0A2T5JMR0_9PROT (Putative nucleic acid-binding protein n=1 Tax=Nitrosospira sp. Nsp5 TaxID=200119 RepID=A0A2T5JMR0_9PROT) HSP 1 Score: 79.3 bits (194), Expect = 5.740e-16 Identity = 44/100 (44.00%), Postives = 59/100 (59.00%), Query Frame = 3
Query: 177 VTFVLDSSVSLSWCFDDGFTGATGALM-------------------------ERRRRIDSAKRVRHIEFLRDLPVAIDADTVSQAWTVTSQLAERHRLTL 401
++ VLDSSV+L+WCF+D T AT AL+ ERR R+D +R + FLRDLPV++D +T QAWT+T +LAER+RLTL
Sbjct: 1 MSLVLDSSVALTWCFEDERTLATLALLDQITETGATAPALWPLEVLNALTMAERRGRLDGTQRHQLAGFLRDLPVSLDQETADQAWTITMRLAERYRLTL 100
BLAST of mRNA_P-wetherbeei_contig18821.2.1 vs. uniprot
Match: A0A2T5JMS4_9PROT (Antitoxin n=1 Tax=Nitrosospira sp. Nsp5 TaxID=200119 RepID=A0A2T5JMS4_9PROT) HSP 1 Score: 76.6 bits (187), Expect = 1.500e-15 Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 7 EEVLITRRGKPVARLVPAEPVFDREKARRAVEGIRETRKGLTPGGLKIKDLINEGRP 177
EEVLITR GK VARLVPAEP F+R +AR+A G+ E +G+T GL IKDL+NEGRP
Sbjct: 24 EEVLITRHGKAVARLVPAEPGFNRARARQAARGLLEASQGVTLNGLNIKDLVNEGRP 80
BLAST of mRNA_P-wetherbeei_contig18821.2.1 vs. uniprot
Match: A0A7S6LYY5_9PROT (Antitoxin n=1 Tax=Nitrosomonas sp. H1_AOB3 TaxID=2741553 RepID=A0A7S6LYY5_9PROT) HSP 1 Score: 74.7 bits (182), Expect = 8.430e-15 Identity = 38/57 (66.67%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 7 EEVLITRRGKPVARLVPAEPVFDREKARRAVEGIRETRKGLTPGGLKIKDLINEGRP 177
EEV+ITR GK VARLVPA+ FDR KAR+A I R+G+T G +KIKDLINEGRP
Sbjct: 24 EEVVITRHGKAVARLVPAQEQFDRTKARQAAVNITARRRGITLGNIKIKDLINEGRP 80
BLAST of mRNA_P-wetherbeei_contig18821.2.1 vs. uniprot
Match: A0A537A9X1_9PROT (Antitoxin n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A9X1_9PROT) HSP 1 Score: 74.7 bits (182), Expect = 8.430e-15 Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 1
Query: 7 EEVLITRRGKPVARLVPAEPVFDREKARRAVEGIRETRKGLTPGGLKIKDLINEGR 174
EEV+ITRRGK VARL+P FDREKA +AV GI R G+T GGLKIKDL+NEGR
Sbjct: 24 EEVVITRRGKVVARLIPGTSGFDREKAAQAVAGILARRVGVTLGGLKIKDLVNEGR 79 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18821.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18821.2.1 >prot_P-wetherbeei_contig18821.2.1 ID=prot_P-wetherbeei_contig18821.2.1|Name=mRNA_P-wetherbeei_contig18821.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=60bp RREEVLITRRGKPVARLVPAEPVFDREKARRAVEGIRETRKGLTPGGLKIback to top mRNA from alignment at P-wetherbeei_contig18821:845..1325+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18821.2.1 ID=mRNA_P-wetherbeei_contig18821.2.1|Name=mRNA_P-wetherbeei_contig18821.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=481bp|location=Sequence derived from alignment at P-wetherbeei_contig18821:845..1325+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18821:845..1325+ >mRNA_P-wetherbeei_contig18821.2.1 ID=mRNA_P-wetherbeei_contig18821.2.1|Name=mRNA_P-wetherbeei_contig18821.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=180bp|location=Sequence derived from alignment at P-wetherbeei_contig18821:845..1325+ (Phaeothamnion wetherbeei SAG_119_79)back to top |