mRNA_P-wetherbeei_contig18806.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18806.1.1 vs. uniprot
Match: A0A523P2A0_9PROT (Histidine kinase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P2A0_9PROT) HSP 1 Score: 184 bits (466), Expect = 9.470e-52 Identity = 105/202 (51.98%), Postives = 137/202 (67.82%), Query Frame = 1
Query: 25 LEVRQRVQHNNWNALRYFNFYRIVIAGVFAILGLTGKLPPNLSEVDSRLFVGSALGYLVFSIGALFAVEQRAPGYRVQVYGGVLADVLATSLLMHAAGGVTSGIGILLVMSVAGACLLASGRAAVFFAALASIALLSETFFGTLYDGYSPANYTQAGLLGAACFGTAVLASALAERARRSEALAAARALDIEHLSRLNEHIV 630
+++ + W ALRYF YRIVI+G+F++L KLPP+ +E + R F +A YL +I A AVE+R R+QVY VL D+LA ++ + A+GGV G GILLV+S+AG CL + A+F ALAS+A+L ET G Y Y YTQAGLLG A FG A+LAS LAE+ RRSEALAA RA+DIE+LSRLNE+I+
Sbjct: 13 MDIPVAAEERRWQALRYFCLYRIVISGLFSVLAFFSKLPPSFTEFNVRQFAFTASVYLGLAIVAQVAVERRWGPMRLQVYAQVLLDILAITVFIRASGGVAGGFGILLVVSIAGGCLFVKPKVAIFCGALASLAVLGETVAGIWYLEYPNTTYTQAGLLGTALFGAALLASILAEQVRRSEALAAKRAVDIENLSRLNEYII 214
BLAST of mRNA_P-wetherbeei_contig18806.1.1 vs. uniprot
Match: A0A1W9L5J0_9GAMM (PAS domain-containing protein (Fragment) n=1 Tax=Beggiatoa sp. IS2 TaxID=1934247 RepID=A0A1W9L5J0_9GAMM) HSP 1 Score: 152 bits (385), Expect = 2.930e-41 Identity = 85/192 (44.27%), Postives = 121/192 (63.02%), Query Frame = 1
Query: 55 NWNALRYFNFYRIVIAGVFAILGLTGKLPPNLSEVDSRLFVGSALGYLVFSIGALFAVEQRAPGYRVQVYGGVLADVLATSLLMHAAGGVTSGIGILLVMSVAGACLLASGRAAVFFAALASIALLSETFFGTLYDGYSPANYTQAGLLGAACFGTAVLASALAERARRSEALAAARALDIEHLSRLNEHIV 630
+W L FN YR+ +A F I + G P L E +++LF+ + L Y +F+I F + +R P + +QV VL D+ +LLMHA+GGV SG+G+LL + VAG LL GR A+FFAA+AS+A+L +Y + +YT A +LG A F TA+LA LA+RAR SEALA R + +++LS+LN IV
Sbjct: 22 DWRPLYLFNLYRLTVALTFTITVIVGVAPSFLGESNTQLFIFTGLCYCIFAIFCFFTILRRWPSFNIQVLSQVLIDIFIITLLMHASGGVGSGLGLLLAVIVAGGSLLTEGRTAIFFAAIASLAVLIHVALADMYGWFYATSYTHASMLGTAFFATAILAYVLAKRARASEALAKQRGVHLQYLSQLNAQIV 213
BLAST of mRNA_P-wetherbeei_contig18806.1.1 vs. uniprot
Match: A0A7C5NJ75_9GAMM (Histidine kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5NJ75_9GAMM) HSP 1 Score: 155 bits (392), Expect = 5.480e-41 Identity = 89/191 (46.60%), Postives = 129/191 (67.54%), Query Frame = 1
Query: 58 WNALRYFNFYRIVIAGVFAILGLTGKLPPNLSEVDSRLFVGSALGYLVFSIGALFAVEQRAPGYRVQVYGGVLADVLATSLLMHAAGGVTSGIGILLVMSVAGACLLASGRAAVFFAALASIALLSETFFGTLYDGYSPANYTQAGLLGAACFGTAVLASALAERARRSEALAAARALDIEHLSRLNEHIV 630
W LRY N YR+++AG+F +G P L RLF ++ YLV ++ + A+ +R ++VQV+G VL D+ A +L+M+A+GGV SG+G+LLV++VAG LL GR A FAA+A++A+LSE + L +G PA+YTQAGLLGA F TA+LA LA R R SEALA R +D+ ++++L E+I+
Sbjct: 28 WKQLRYLNHYRVLLAGLFFAFVASGTPPAPLGSHHPRLFQWTSGVYLVLALASTLAIHRRWFPFKVQVHGHVLLDIAAITLMMYASGGVRSGLGMLLVVAVAGGSLLTEGRTARLFAAIATLAVLSEQLYNKL-EGSLPASYTQAGLLGAGFFATAILAHGLARRLRESEALAERRGVDLANMAQLTEYII 217
BLAST of mRNA_P-wetherbeei_contig18806.1.1 vs. uniprot
Match: A0A496VXA0_9GAMM (Histidine kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496VXA0_9GAMM) HSP 1 Score: 154 bits (390), Expect = 9.060e-41 Identity = 89/192 (46.35%), Postives = 125/192 (65.10%), Query Frame = 1
Query: 55 NWNALRYFNFYRIVIAGVFAILGLTGKLPPNLSEVDSRLFVGSALGYLVFSIGALFAVEQRAPGYRVQVYGGVLADVLATSLLMHAAGGVTSGIGILLVMSVAGACLLASGRAAVFFAALASIALLSETFFGTLYDGYSPANYTQAGLLGAACFGTAVLASALAERARRSEALAAARALDIEHLSRLNEHIV 630
NW AL FN YR+ IA V I LT P L D+RLF+ + Y F+I ++F + R P + +QV+G VL D+LA ++LMHA+GGV SG+G+LLV ++AG+ LL GR A FFAA+AS+++L + +Y ++ Y+ AG+LG + F TA LA LA RAR SEALA R +D++ L++LN IV
Sbjct: 20 NWKALSLFNLYRLTIATVLIISVLTNIFPIFLGLFDTRLFLITGWLYSSFAIFSIFTIGHRWPSFHIQVFGQVLLDILAFTVLMHASGGVNSGLGMLLVATIAGSSLLTEGRTAFFFAAVASLSVLIQVVLVDIYFWFAYTGYSHAGMLGISFFATAFLAHTLARRARASEALAKQRGVDVQFLAQLNAQIV 211
BLAST of mRNA_P-wetherbeei_contig18806.1.1 vs. uniprot
Match: A0A257T139_9GAMM (Histidine kinase n=1 Tax=Chromatiales bacterium 21-64-14 TaxID=1970504 RepID=A0A257T139_9GAMM) HSP 1 Score: 155 bits (392), Expect = 9.230e-41 Identity = 90/194 (46.39%), Postives = 126/194 (64.95%), Query Frame = 1
Query: 52 NNWNALRYFNFYRIVIAGVFAILGLTGKLPPNLSEVDS-RLFVGSALGYLVFSIGALFAVEQRAPGYRVQVYGGVLADVLATSLLMHAAGGVTSGIGILLVMSVAGACLLASGRAAVFFAALASIALLSETFFGTLYDGYSPANYTQAGLLGAACFGTAVLASALAERARRSEALAAARALDIEHLSRLNEHIV 630
+ W LR+FN YR+V+AG+FA+ PP + + + RLF L YL F+I A A + R PG+ QVY ++AD++A +LLMHA+GGV S +G+LLV+S+A LL GR A+ FAALA++A+L E + ++TQAG+LG+A F TA++A LA R R SEALAA R D+ +L RLNE I+
Sbjct: 66 HTWKPLRFFNIYRLVLAGLFAVAYFASPTPPEVFGMYAPRLFETVCLSYLAFAIVASLAHQLRWPGFASQVYIEIVADIIAITLLMHASGGVESSLGVLLVISIAAGALLLPGRLAILFAALAALAVLLEQTLAAFQHQGTGGSFTQAGILGSAYFATAIIAYLLARRIRESEALAAQRGADLANLERLNETII 259
BLAST of mRNA_P-wetherbeei_contig18806.1.1 vs. uniprot
Match: A0A7C1Z2A8_9GAMM (Histidine kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1Z2A8_9GAMM) HSP 1 Score: 154 bits (390), Expect = 9.810e-41 Identity = 81/192 (42.19%), Postives = 133/192 (69.27%), Query Frame = 1
Query: 55 NWNALRYFNFYRIVIAGVFAILGLTGKLPPNLSEVDSRLFVGSALGYLVFSIGALFAVEQRAPGYRVQVYGGVLADVLATSLLMHAAGGVTSGIGILLVMSVAGACLLASGRAAVFFAALASIALLSETFFGTLYDGYSPANYTQAGLLGAACFGTAVLASALAERARRSEALAAARALDIEHLSRLNEHIV 630
+W L YFN+YR+V++ +F IL L+G P L +S LF+G AL YL FS+ +++++ ++ + Q ++ D+L +LLMHA+GG+T+G+GIL+V+++AG+ ++ +G+ A+ FAA+ASIA+LSE + L ++ YTQAG+LGA F TA+L+ LA R R +E LA R LD+ ++ ++NE+I+
Sbjct: 19 DWRPLAYFNYYRLVLSSLFVILFLSGPSPSILGSHNSTLFMGGALFYLTFSLFSVYSIYKKQIPFSQQTSLQIVVDILVLTLLMHASGGLTTGLGILMVITIAGSSIILAGKLALLFAAIASIAVLSEQVYAQLSHSFATTAYTQAGILGATFFTTALLSHVLAVRIRATEELATQRGLDLANMEQVNEYII 210
BLAST of mRNA_P-wetherbeei_contig18806.1.1 vs. uniprot
Match: A0A3M1DQP0_9GAMM (Histidine kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DQP0_9GAMM) HSP 1 Score: 154 bits (389), Expect = 1.530e-40 Identity = 87/191 (45.55%), Postives = 128/191 (67.02%), Query Frame = 1
Query: 58 WNALRYFNFYRIVIAGVFAILGLTGKLPPNLSEVDSRLFVGSALGYLVFSIGALFAVEQRAPGYRVQVYGGVLADVLATSLLMHAAGGVTSGIGILLVMSVAGACLLASGRAAVFFAALASIALLSETFFGTLYDGYSPANYTQAGLLGAACFGTAVLASALAERARRSEALAAARALDIEHLSRLNEHIV 630
W ALRYFN YRI++A +F +L ++G LPP L D R F +A + + ++G+ +E R Y + + + DVL +LLM+A+GG+ SG G+L+V+S+A A +L+ R A F+AALA++A+L E + LYD + +NYT+AGLLGAA F TA L ++A R R SEALAA R+ D+ +LS L+ HI+
Sbjct: 32 WRALRYFNLYRIIVAALFLLLAVSGVLPPPLGSYDPRTFTFAAALFFLLAVGSQLMLEYRWLRYDLSTFVVIGGDVLCITLLMYASGGLASGFGLLMVISIAAAGMLSRERQAFFYAALAALAVLIEESWFWLYDFFPVSNYTRAGLLGAAFFITAFLGHSMARRIRESEALAARRSSDLRNLSALHTHII 222
BLAST of mRNA_P-wetherbeei_contig18806.1.1 vs. uniprot
Match: A7C102_9GAMM (Signal transduction histidine kinase n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7C102_9GAMM) HSP 1 Score: 148 bits (374), Expect = 1.930e-40 Identity = 84/203 (41.38%), Postives = 125/203 (61.58%), Query Frame = 1
Query: 22 ALEVRQRVQHNNWNALRYFNFYRIVIAGVFAILGLTGKLPPNLSEVDSRLFVGSALGYLVFSIGALFAVEQRAPGYRVQVYGGVLADVLATSLLMHAAGGVTSGIGILLVMSVAGACLLASGRAAVFFAALASIALLSETFFGTLYDGYSPANYTQAGLLGAACFGTAVLASALAERARRSEALAAARALDIEHLSRLNEHIV 630
A ++ ++W AL FN YR+ +A +F + L G P L + D RLF+ + Y+ F I + F + +RVQV+G VL D+LA +LMHA+GG+ SG+G+LLV+++AG LL GR A F AA+AS+ +L + G +Y ++ ANYT AG+LG + F TA LA LA+R R +E LA R + ++ + +LN IV
Sbjct: 11 AEKIDSNAPQSDWKALFLFNIYRLTVATLFTGVVLAGVSPSFLGQFDQRLFLVTGWLYICFGIFSFFTIHHHWLSFRVQVFGQVLLDILAIMILMHASGGIGSGLGMLLVVTIAGGSLLTEGRTAFFLAAIASLGVLIQVGLGDIYYLFAYANYTHAGMLGISFFATAFLAHTLAKRVRMNEILAEQRGIHLQFMQQLNVQIV 213
BLAST of mRNA_P-wetherbeei_contig18806.1.1 vs. uniprot
Match: I3CGK1_9GAMM (Histidine kinase n=1 Tax=Beggiatoa alba B18LD TaxID=395493 RepID=I3CGK1_9GAMM) HSP 1 Score: 152 bits (385), Expect = 5.180e-40 Identity = 86/192 (44.79%), Postives = 122/192 (63.54%), Query Frame = 1
Query: 55 NWNALRYFNFYRIVIAGVFAILGLTGKLPPNLSEVDSRLFVGSALGYLVFSIGALFAVEQRAPGYRVQVYGGVLADVLATSLLMHAAGGVTSGIGILLVMSVAGACLLASGRAAVFFAALASIALLSETFFGTLYDGYSPANYTQAGLLGAACFGTAVLASALAERARRSEALAAARALDIEHLSRLNEHIV 630
+W AL FNFYR++IA +F I +T P L D LF+ A YL F++ +F + R P + +QV G + D+L +LLMH +GGV+SG+G+LLV+SVAG LL+ GR A FFAA+AS+ +L F+ ++ + +YT A +LGA F TA A LA+R R SEALA R L +++L++LN IV
Sbjct: 20 DWTALYLFNFYRLIIALLFVITFITDSAPSFLGRYDEPLFLIVAWVYLGFALTCIFMTDYRYPSFNLQVLGQIPIDILLITLLMHTSGGVSSGMGMLLVVSVAGGSLLSEGRTAFFFAAIASLCVLGHVFYADAFNWFQTTSYTHASMLGATFFATAFSAYTLAKRVRISEALARQRGLHVQYLAQLNAEIV 211
BLAST of mRNA_P-wetherbeei_contig18806.1.1 vs. uniprot
Match: A0A2A4WCF2_9GAMM (Histidine kinase n=2 Tax=Thiotrichales TaxID=72273 RepID=A0A2A4WCF2_9GAMM) HSP 1 Score: 152 bits (384), Expect = 6.680e-40 Identity = 86/201 (42.79%), Postives = 131/201 (65.17%), Query Frame = 1
Query: 28 EVRQRVQHNNWNALRYFNFYRIVIAGVFAILGLTGKLPPNLSEVDSRLFVGSALGYLVFSIGALFAVEQRAPGYRVQVYGGVLADVLATSLLMHAAGGVTSGIGILLVMSVAGACLLASGRAAVFFAALASIALLSETFFGTLYDGYSPANYTQAGLLGAACFGTAVLASALAERARRSEALAAARALDIEHLSRLNEHIV 630
E+++ W LR N YRI +AG+ +IL + +P L + LF +++ YL+ + + +++++AP + QVY VL D+ +LLMHA+GG+ SG+GILLV++VAG LL GR A+ FA++A+IALLSE + + + NYTQAGLLGA+ F TA+LA ALA+R SEALA R +D+ +++L E+I+
Sbjct: 6 EIKRTANTQMWLPLRLLNLYRITLAGLASILCYSDSIPSPLGSSNFNLFYVTSIVYLIVGLLNVISIKRQAPYFESQVYSHVLVDIAIITLLMHASGGIGSGMGILLVIAVAGGSLLIVGRTAILFASIATIALLSEQIYTSWSNPLWNTNYTQAGLLGASLFATAILAQALAKRLHESEALAEKRGVDLASMAQLTEYII 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18806.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18806.1.1 >prot_P-wetherbeei_contig18806.1.1 ID=prot_P-wetherbeei_contig18806.1.1|Name=mRNA_P-wetherbeei_contig18806.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=210bp MSQSATRALEVRQRVQHNNWNALRYFNFYRIVIAGVFAILGLTGKLPPNLback to top mRNA from alignment at P-wetherbeei_contig18806:2..631- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18806.1.1 ID=mRNA_P-wetherbeei_contig18806.1.1|Name=mRNA_P-wetherbeei_contig18806.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=630bp|location=Sequence derived from alignment at P-wetherbeei_contig18806:2..631- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18806:2..631- >mRNA_P-wetherbeei_contig18806.1.1 ID=mRNA_P-wetherbeei_contig18806.1.1|Name=mRNA_P-wetherbeei_contig18806.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=630bp|location=Sequence derived from alignment at P-wetherbeei_contig18806:2..631- (Phaeothamnion wetherbeei SAG_119_79)back to top |