mRNA_P-wetherbeei_contig18784.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18784.1.1
Unique NamemRNA_P-wetherbeei_contig18784.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18784.1.1 vs. uniprot
Match: A0A7C4XMQ3_9HYPH (Peptidoglycan -binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XMQ3_9HYPH)

HSP 1 Score: 389 bits (1000), Expect = 1.870e-133
Identity = 209/271 (77.12%), Postives = 241/271 (88.93%), Query Frame = 1
Query:    1 MARQ-RKSSEYAEFWPGYVDMLSTLLMVFMFLLTIFMLSQYYVGREASGKDDALRRLTRQISELTNILALEKGRASTASEELAALQATLSSLKAENAKLSGFALEGDEKSKATQAXXXXXTRDLDDQKRVTNEALAKVDILNQQLLALRRQIAALNDALEASERKDRDAQDRIKDLGSRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMTVEGLQAIDQLADAIVTLERSIPPEIDWTLQVDGHTD 810
            MAR  R+S++Y EFWPGYVDMLSTLL+VF+FLL+IFML+QY+  +E  GKDDALRRL RQI+ELT++LALEKG++ +A EELA LQATL+SL+ ENA+LSGFAL GDEK+KA +A       +LD QK+++ EA AK+D+LNQQLLALRRQIAALN+ALEASERKDR++QDRI+DLGSRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQA MT+EGL AIDQLA AI+ LER IPPEIDW LQVDGHTD
Sbjct:    1 MARAGRRSTQYGEFWPGYVDMLSTLLLVFVFLLSIFMLAQYFASQEVIGKDDALRRLNRQIAELTSMLALEKGKSKSALEELAVLQATLTSLRQENARLSGFALSGDEKAKAAEARISSLASELDQQKKLSTEAQAKIDLLNQQLLALRRQIAALNEALEASERKDRESQDRIRDLGSRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQAQMTIEGLAAIDQLATAILELERKIPPEIDWALQVDGHTD 271          
BLAST of mRNA_P-wetherbeei_contig18784.1.1 vs. uniprot
Match: UPI00037E3071 (peptidoglycan -binding protein n=2 Tax=Hyphomicrobium TaxID=81 RepID=UPI00037E3071)

HSP 1 Score: 381 bits (979), Expect = 3.010e-130
Identity = 201/268 (75.00%), Postives = 238/268 (88.81%), Query Frame = 1
Query:    7 RQRKSSEYAEFWPGYVDMLSTLLMVFMFLLTIFMLSQYYVGREASGKDDALRRLTRQISELTNILALEKGRASTASEELAALQATLSSLKAENAKLSGFALEGDEKSKATQAXXXXXTRDLDDQKRVTNEALAKVDILNQQLLALRRQIAALNDALEASERKDRDAQDRIKDLGSRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMTVEGLQAIDQLADAIVTLERSIPPEIDWTLQVDGHTD 810
            R R+  EY EFWPGYVD+LSTLL+V  FL++IFM+SQY+  +EASGKD AL+RLTRQISELTN+L+LEKG+A +A++ELA+LQ+TL+ LKAE++KLSGFAL GDEK+KA +      T DL+ QK ++NEALAKVD+LNQQ+LALRRQ+AALN+ALEASE+KD+D+QDRIKDLG RLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVF+SEVLFPSGQAT+T EGL A+DQLA AIV L ++IPPEI W LQVDGHTD
Sbjct:    5 RSRRGGEYGEFWPGYVDVLSTLLLVVTFLMSIFMISQYFATQEASGKDTALKRLTRQISELTNLLSLEKGKARSAADELASLQSTLADLKAEHSKLSGFALSGDEKAKAAEGKIQSLTADLEAQKNISNEALAKVDLLNQQMLALRRQLAALNEALEASEKKDKDSQDRIKDLGQRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFESEVLFPSGQATLTPEGLAAMDQLAIAIVDLAKTIPPEIKWALQVDGHTD 272          
BLAST of mRNA_P-wetherbeei_contig18784.1.1 vs. uniprot
Match: A0A2W4RTC5_9PROT (Peptidoglycan-binding protein n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RTC5_9PROT)

HSP 1 Score: 370 bits (949), Expect = 1.090e-125
Identity = 196/268 (73.13%), Postives = 233/268 (86.94%), Query Frame = 1
Query:    7 RQRKSSEYAEFWPGYVDMLSTLLMVFMFLLTIFMLSQYYVGREASGKDDALRRLTRQISELTNILALEKGRASTASEELAALQATLSSLKAENAKLSGFALEGDEKSKATQAXXXXXTRDLDDQKRVTNEALAKVDILNQQLLALRRQIAALNDALEASERKDRDAQDRIKDLGSRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMTVEGLQAIDQLADAIVTLERSIPPEIDWTLQVDGHTD 810
            R R   +Y EFWPGYVD+LSTLL+VF FLL+IFML+QY+V +E+SGKD ALRRLTRQI+ELTN+L+LEKG+A    +ELAALQATL++L+ EN +L+G   E +E  + +QA     T DLD+Q +++NEALAKVD+LNQQLLALR+QIAALN+ALEASERKD+++Q+RI+DLG RLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQ+EVLFPSGQA +T EGL AIDQLA AI+ LER+IPPEIDW LQVDGHTD
Sbjct:    5 RGRHGGQYGEFWPGYVDVLSTLLLVFTFLLSIFMLAQYFVSQESSGKDAALRRLTRQIAELTNLLSLEKGKAKNIEDELAALQATLATLREENERLTGLVAEKEEAVRGSQARISALTSDLDEQTKISNEALAKVDLLNQQLLALRKQIAALNEALEASERKDQESQERIRDLGQRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQAEVLFPSGQAELTPEGLAAIDQLATAILELERTIPPEIDWVLQVDGHTD 272          
BLAST of mRNA_P-wetherbeei_contig18784.1.1 vs. uniprot
Match: UPI000930E353 (peptidoglycan -binding protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI000930E353)

HSP 1 Score: 369 bits (947), Expect = 2.190e-125
Identity = 196/268 (73.13%), Postives = 236/268 (88.06%), Query Frame = 1
Query:    7 RQRKSSEYAEFWPGYVDMLSTLLMVFMFLLTIFMLSQYYVGREASGKDDALRRLTRQISELTNILALEKGRASTASEELAALQATLSSLKAENAKLSGFALEGDEKSKATQAXXXXXTRDLDDQKRVTNEALAKVDILNQQLLALRRQIAALNDALEASERKDRDAQDRIKDLGSRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMTVEGLQAIDQLADAIVTLERSIPPEIDWTLQVDGHTD 810
            R R+ +EYA+FWPGYVD+LSTLL+V  FL++IFML+QY+  +EASGKD AL+RLT QISELT++LALEKG+A +A++ELAALQA+LSS++ EN+KLSGFAL GDE +KA +A     T DL++QK++++EALAKVDILNQQLL+LRRQIAALN+ALEASE+KD ++Q RIKDLG+RLNAALARQVQELQRYRSDFFGRLRELLK+RKDIRVVGDRFVF+SEVLFPSG   +T EGL  +DQLA AI+ LER IP EIDW LQVDGHTD
Sbjct:    5 RTRRRNEYADFWPGYVDVLSTLLLVVTFLMSIFMLAQYFASQEASGKDTALKRLTLQISELTSLLALEKGKAKSAADELAALQASLSSMREENSKLSGFALSGDEAAKAAEARISGLTTDLENQKKISDEALAKVDILNQQLLSLRRQIAALNEALEASEKKDAESQTRIKDLGARLNAALARQVQELQRYRSDFFGRLRELLKNRKDIRVVGDRFVFESEVLFPSGSNQLTPEGLATMDQLASAIIQLEREIPKEIDWALQVDGHTD 272          
BLAST of mRNA_P-wetherbeei_contig18784.1.1 vs. uniprot
Match: V5SG06_9HYPH (OmpA-like domain-containing protein n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SG06_9HYPH)

HSP 1 Score: 369 bits (946), Expect = 3.210e-125
Identity = 197/267 (73.78%), Postives = 232/267 (86.89%), Query Frame = 1
Query:   10 QRKSSEYAEFWPGYVDMLSTLLMVFMFLLTIFMLSQYYVGREASGKDDALRRLTRQISELTNILALEKGRASTASEELAALQATLSSLKAENAKLSGFALEGDEKSKATQAXXXXXTRDLDDQKRVTNEALAKVDILNQQLLALRRQIAALNDALEASERKDRDAQDRIKDLGSRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMTVEGLQAIDQLADAIVTLERSIPPEIDWTLQVDGHTD 810
            +R +SEY EFWP YVD+LSTLL+V MFL++IFMLSQY+  +EASGKD AL+RL RQI+ELTN+L+LEKG++ +A +ELA+LQATLS LK E+ KLSGFAL GDEK+K  +      T +LD QK ++NEALAKVD+LNQQ+LALRRQIAALNDALEASE+KD+D+QDRIKDLG+RLNAALARQVQELQRYRSDFFGRLRELL+DRKDIRVVGDRFVF+SEVLFPSGQA +T EG  A+DQLA AI  L ++IPPEI W LQVDGHTD
Sbjct:    7 RRHNSEYGEFWPAYVDVLSTLLLVVMFLMSIFMLSQYFAMQEASGKDTALQRLNRQIAELTNLLSLEKGKSRSAEDELASLQATLSDLKDEHQKLSGFALSGDEKAKTAEGRIQTLTVELDQQKEISNEALAKVDLLNQQMLALRRQIAALNDALEASEKKDQDSQDRIKDLGARLNAALARQVQELQRYRSDFFGRLRELLQDRKDIRVVGDRFVFESEVLFPSGQAMLTAEGFGAMDQLAAAIRDLAKTIPPEIKWALQVDGHTD 273          
BLAST of mRNA_P-wetherbeei_contig18784.1.1 vs. uniprot
Match: A0A101VJA2_9PROT (OmpA-like domain-containing protein n=1 Tax=Alphaproteobacteria bacterium BRH_c36 TaxID=1734406 RepID=A0A101VJA2_9PROT)

HSP 1 Score: 359 bits (922), Expect = 1.280e-121
Identity = 191/270 (70.74%), Postives = 229/270 (84.81%), Query Frame = 1
Query:    1 MARQRKSSEYAEFWPGYVDMLSTLLMVFMFLLTIFMLSQYYVGREASGKDDALRRLTRQISELTNILALEKGRASTASEELAALQATLSSLKAENAKLSGFALEGDEKSKATQAXXXXXTRDLDDQKRVTNEALAKVDILNQQLLALRRQIAALNDALEASERKDRDAQDRIKDLGSRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMTVEGLQAIDQLADAIVTLERSIPPEIDWTLQVDGHTD 810
            MAR R+ ++Y EFWPGYVD LSTLL+V  FL++IFML+QY+  +E+SGKD AL RL RQI+ELT+IL+LE+G+  +A ++LAALQA+L++L+ EN +LSGFAL GD+  KA  A     T DL++QK ++NEALAKVD+LNQQ+L+LRRQIAALN+ALEASERKD++AQDRIKDLGSRLNAALARQVQEL+RYRSDFFGRLRELL  RKDIRVVGDRFVFQSEVLFPSG   MT EGL A+DQLA AI+ LE  IP EI+W LQVDGHTD
Sbjct:    1 MARTRRGADYGEFWPGYVDALSTLLLVVTFLMSIFMLAQYFATQESSGKDTALNRLNRQIAELTSILSLERGKTKSAEDDLAALQASLATLREENTRLSGFALSGDDAQKAATARISSLTTDLENQKEISNEALAKVDLLNQQMLSLRRQIAALNEALEASERKDQEAQDRIKDLGSRLNAALARQVQELKRYRSDFFGRLRELLAGRKDIRVVGDRFVFQSEVLFPSGSDLMTAEGLAAMDQLASAIIELEGQIPKEIEWALQVDGHTD 270          
BLAST of mRNA_P-wetherbeei_contig18784.1.1 vs. uniprot
Match: A0A109BKF0_HYPSL (Flagellar motor rotation protein MotB n=2 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A109BKF0_HYPSL)

HSP 1 Score: 358 bits (919), Expect = 3.920e-121
Identity = 190/268 (70.90%), Postives = 234/268 (87.31%), Query Frame = 1
Query:    7 RQRKSSEYAEFWPGYVDMLSTLLMVFMFLLTIFMLSQYYVGREASGKDDALRRLTRQISELTNILALEKGRASTASEELAALQATLSSLKAENAKLSGFALEGDEKSKATQAXXXXXTRDLDDQKRVTNEALAKVDILNQQLLALRRQIAALNDALEASERKDRDAQDRIKDLGSRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMTVEGLQAIDQLADAIVTLERSIPPEIDWTLQVDGHTD 810
            R R+ +EY +FWPGYVD+LSTLL+V  FL++IFML+QY+ G+EASGKD ALR+LT QI+ELTN+L+LEKG++  A +E+AALQATLSSL+A+N++LSG AL GDE +K+  A     T +L++QK+V++EALAKVD+LNQQLL+LRRQIAALN+ALEASE+KD ++Q RIKDLG+RLNAALARQVQELQRYRSDFFGRLRELL++RKDIRVVGDRFVF+SEVLFPSG   +T EGL A+DQLA AI+ LE+ IP EIDW LQVDGHTD
Sbjct:    5 RSRRRAEYNDFWPGYVDVLSTLLLVVTFLMSIFMLAQYFAGQEASGKDTALRQLTLQITELTNLLSLEKGKSKEALDEMAALQATLSSLRADNSRLSGSALSGDEAAKSADARISGLTIELENQKKVSDEALAKVDLLNQQLLSLRRQIAALNEALEASEKKDAESQTRIKDLGARLNAALARQVQELQRYRSDFFGRLRELLRNRKDIRVVGDRFVFESEVLFPSGSNQLTPEGLAAMDQLASAIIELEKEIPKEIDWALQVDGHTD 272          
BLAST of mRNA_P-wetherbeei_contig18784.1.1 vs. uniprot
Match: A0A0D6J9R1_9HYPH (OmpA-like domain-containing protein n=1 Tax=Candidatus Filomicrobium marinum TaxID=1608628 RepID=A0A0D6J9R1_9HYPH)

HSP 1 Score: 358 bits (918), Expect = 5.550e-121
Identity = 193/268 (72.01%), Postives = 225/268 (83.96%), Query Frame = 1
Query:    7 RQRKSSEYAEFWPGYVDMLSTLLMVFMFLLTIFMLSQYYVGREASGKDDALRRLTRQISELTNILALEKGRASTASEELAALQATLSSLKAENAKLSGFALEGDEKSKATQAXXXXXTRDLDDQKRVTNEALAKVDILNQQLLALRRQIAALNDALEASERKDRDAQDRIKDLGSRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMTVEGLQAIDQLADAIVTLERSIPPEIDWTLQVDGHTD 810
            R R+ +EY+EFWPGYVD+LSTLL+V  FL++IFML+Q++  +E +GKD AL+RL  QI+ELTN+L+LEKGR   A +ELAALQATL+SL+ EN KLSG AL GDE +K  Q      T DL++QK +++EALAK+D+LNQQ+LALRRQIAALNDALEASE KDR +QDRIKDLG RLNAALARQVQEL+RYRSDFFGRLRELL  RKDIRVVGDRFVFQSEVLFPSG A M+VEGL A+DQLA AI  LER IP EIDW LQVDGHTD
Sbjct:    5 RGRRGAEYSEFWPGYVDVLSTLLLVMTFLMSIFMLAQFFATQEVTGKDTALKRLNLQIAELTNLLSLEKGRTKQAEDELAALQATLASLQEENQKLSGSALSGDEAAKLAQGKIVSLTEDLENQKDISSEALAKIDLLNQQILALRRQIAALNDALEASEAKDRQSQDRIKDLGERLNAALARQVQELKRYRSDFFGRLRELLAGRKDIRVVGDRFVFQSEVLFPSGSADMSVEGLAAMDQLASAIKELERQIPSEIDWALQVDGHTD 272          
BLAST of mRNA_P-wetherbeei_contig18784.1.1 vs. uniprot
Match: A0A537RWB9_9PROT (Peptidoglycan-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RWB9_9PROT)

HSP 1 Score: 349 bits (895), Expect = 1.510e-117
Identity = 186/268 (69.40%), Postives = 228/268 (85.07%), Query Frame = 1
Query:    7 RQRKSSEYAEFWPGYVDMLSTLLMVFMFLLTIFMLSQYYVGREASGKDDALRRLTRQISELTNILALEKGRASTASEELAALQATLSSLKAENAKLSGFALEGDEKSKATQAXXXXXTRDLDDQKRVTNEALAKVDILNQQLLALRRQIAALNDALEASERKDRDAQDRIKDLGSRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMTVEGLQAIDQLADAIVTLERSIPPEIDWTLQVDGHTD 810
            R R+S+ Y EFWPGYVD+LSTLL+V  FL+++FM+SQ+YV +EASGKD ALRRLTRQI+E+TN+L+LEKG+  +  +ELA LQA+L++L++EN +L+G A  G +K     A     T++L D+  ++NEA+AKVD+LNQQLLALRRQIAALN+AL+A+E KD+++Q RI DLG+RLN  LARQVQELQRYRSDFFGRLRELL+DRKDIRVVGDRFVFQSEVLFPSGQATMT+EGL AIDQLA AIV LER+IP EIDW LQVDGHTD
Sbjct:    5 RARRSTSYGEFWPGYVDVLSTLLLVVTFLMSVFMVSQFYVSQEASGKDTALRRLTRQIAEITNLLSLEKGKGKSLEDELAGLQASLATLRSENERLTGLAGAGSDKDARISAL----TKELADKSSISNEAMAKVDLLNQQLLALRRQIAALNEALQAAESKDKESQARISDLGARLNVVLARQVQELQRYRSDFFGRLRELLRDRKDIRVVGDRFVFQSEVLFPSGQATMTLEGLAAIDQLAAAIVELERAIPKEIDWALQVDGHTD 268          
BLAST of mRNA_P-wetherbeei_contig18784.1.1 vs. uniprot
Match: A0A7C2LTL7_9HYPH (Peptidoglycan -binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LTL7_9HYPH)

HSP 1 Score: 346 bits (888), Expect = 1.740e-116
Identity = 188/269 (69.89%), Postives = 226/269 (84.01%), Query Frame = 1
Query:    4 ARQRKSSEYAEFWPGYVDMLSTLLMVFMFLLTIFMLSQYYVGREASGKDDALRRLTRQISELTNILALEKGRASTASEELAALQATLSSLKAENAKLSGFALEGDEKSKATQAXXXXXTRDLDDQKRVTNEALAKVDILNQQLLALRRQIAALNDALEASERKDRDAQDRIKDLGSRLNAALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMTVEGLQAIDQLADAIVTLERSIPPEIDWTLQVDGHTD 810
            +R R+++ Y EFWPGYVD+LSTLL+V  FL+++FM++QYYV +EA+GKD ALRRLTRQI+ELTN+L+LEKGR  +  +ELAALQA  ++L++EN +LSG A  G EK     A     +++L D+ +V+NEA AK+D+LNQQLLALRRQIAAL +AL A+E KD+++Q RI DLG+RLN ALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMT EGL AIDQLA AI+ LERSIP EIDW LQVDGHTD
Sbjct:    4 SRARRANSYGEFWPGYVDVLSTLLLVVTFLMSVFMVAQYYVSQEATGKDTALRRLTRQIAELTNLLSLEKGRGKSLEDELAALQAAFATLRSENERLSGAAAAGAEKD----ARITALSKELADKTQVSNEASAKIDLLNQQLLALRRQIAALQEALGAAEAKDKESQARISDLGARLNVALARQVQELQRYRSDFFGRLRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMTPEGLAAIDQLAAAIIELERSIPREIDWALQVDGHTD 268          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18784.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4XMQ3_9HYPH1.870e-13377.12Peptidoglycan -binding protein n=1 Tax=Hyphomicrob... [more]
UPI00037E30713.010e-13075.00peptidoglycan -binding protein n=2 Tax=Hyphomicrob... [more]
A0A2W4RTC5_9PROT1.090e-12573.13Peptidoglycan-binding protein n=2 Tax=Proteobacter... [more]
UPI000930E3532.190e-12573.13peptidoglycan -binding protein n=1 Tax=Hyphomicrob... [more]
V5SG06_9HYPH3.210e-12573.78OmpA-like domain-containing protein n=1 Tax=Hyphom... [more]
A0A101VJA2_9PROT1.280e-12170.74OmpA-like domain-containing protein n=1 Tax=Alphap... [more]
A0A109BKF0_HYPSL3.920e-12170.90Flagellar motor rotation protein MotB n=2 Tax=Hyph... [more]
A0A0D6J9R1_9HYPH5.550e-12172.01OmpA-like domain-containing protein n=1 Tax=Candid... [more]
A0A537RWB9_9PROT1.510e-11769.40Peptidoglycan-binding protein n=1 Tax=Alphaproteob... [more]
A0A7C2LTL7_9HYPH1.740e-11669.89Peptidoglycan -binding protein n=1 Tax=Hyphomicrob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18784contigP-wetherbeei_contig18784:1..810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1267005.KB911256_gene1946
Preferred nameMA20_18060
PFAMsOmpA
Model size810
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02557
KEGG TC1.A.30.1
KEGG Pathwayko02030,ko02040,map02030,map02040
Hectar predicted targeting categorysignal anchor
Exons1
Evalue4.94e-131
EggNOG OGsCOG1360@1|root,COG1360@2|Bacteria,1MU4S@1224|Proteobacteria,2TQKZ@28211|Alphaproteobacteria,3N6EY@45401|Hyphomicrobiaceae
DescriptionOmpA family
Cds size810
COG categoryN
BRITEko00000,ko00001,ko02000,ko02035
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186155.3100119-CDS-P-wetherbeei_contig18784:0..8101683186155.3100119-CDS-P-wetherbeei_contig18784:0..810Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18784 1..810 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18784.1.1prot_P-wetherbeei_contig18784.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18784 1..810 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18784.1.1

>prot_P-wetherbeei_contig18784.1.1 ID=prot_P-wetherbeei_contig18784.1.1|Name=mRNA_P-wetherbeei_contig18784.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=270bp
MARQRKSSEYAEFWPGYVDMLSTLLMVFMFLLTIFMLSQYYVGREASGKD
DALRRLTRQISELTNILALEKGRASTASEELAALQATLSSLKAENAKLSG
FALEGDEKSKATQAAMSGLTRDLDDQKRVTNEALAKVDILNQQLLALRRQ
IAALNDALEASERKDRDAQDRIKDLGSRLNAALARQVQELQRYRSDFFGR
LRELLKDRKDIRVVGDRFVFQSEVLFPSGQATMTVEGLQAIDQLADAIVT
LERSIPPEIDWTLQVDGHTD
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mRNA from alignment at P-wetherbeei_contig18784:1..810-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18784.1.1 ID=mRNA_P-wetherbeei_contig18784.1.1|Name=mRNA_P-wetherbeei_contig18784.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig18784:1..810- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCAGGCAGCGAAAATCTTCGGAGTACGCGGAGTTCTGGCCCGGCTA CGTCGATATGCTCTCGACGCTGCTGATGGTCTTCATGTTCCTCCTGACCA TATTCATGCTGTCTCAGTATTACGTCGGCCGCGAAGCGAGCGGAAAGGAC GACGCACTCCGCCGCCTCACGCGCCAGATTTCCGAGTTGACCAACATTCT GGCACTCGAAAAGGGCCGGGCCTCGACGGCCTCCGAAGAGCTGGCGGCGC TGCAGGCGACGCTCTCGAGCCTCAAGGCGGAGAACGCGAAGCTCTCCGGC TTCGCCCTCGAAGGCGACGAGAAGAGCAAGGCCACGCAGGCGGCCATGTC CGGCCTGACCCGCGATCTCGACGATCAGAAGAGAGTGACGAACGAAGCAC TCGCCAAGGTCGATATCCTGAACCAGCAACTCCTCGCATTGCGCCGTCAG ATCGCCGCCCTCAACGACGCGCTCGAAGCCTCCGAGAGGAAGGATCGCGA CGCGCAGGACCGCATCAAGGATCTGGGCTCACGCCTCAACGCGGCGCTGG CGCGTCAGGTCCAGGAATTGCAGCGCTACCGCTCCGACTTCTTCGGCCGC CTCCGCGAACTCCTGAAGGACCGCAAGGACATCCGCGTCGTCGGCGATCG CTTCGTATTCCAATCCGAGGTGCTGTTCCCGTCCGGTCAGGCGACAATGA CGGTCGAAGGCCTTCAGGCGATCGACCAGCTCGCCGACGCCATCGTCACG CTCGAACGCTCGATCCCCCCGGAGATCGACTGGACATTGCAGGTCGATGG CCACACCGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18784:1..810-

>mRNA_P-wetherbeei_contig18784.1.1 ID=mRNA_P-wetherbeei_contig18784.1.1|Name=mRNA_P-wetherbeei_contig18784.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig18784:1..810- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCAGGCAGCGAAAATCTTCGGAGTACGCGGAGTTCTGGCCCGGCTA
CGTCGATATGCTCTCGACGCTGCTGATGGTCTTCATGTTCCTCCTGACCA
TATTCATGCTGTCTCAGTATTACGTCGGCCGCGAAGCGAGCGGAAAGGAC
GACGCACTCCGCCGCCTCACGCGCCAGATTTCCGAGTTGACCAACATTCT
GGCACTCGAAAAGGGCCGGGCCTCGACGGCCTCCGAAGAGCTGGCGGCGC
TGCAGGCGACGCTCTCGAGCCTCAAGGCGGAGAACGCGAAGCTCTCCGGC
TTCGCCCTCGAAGGCGACGAGAAGAGCAAGGCCACGCAGGCGGCCATGTC
CGGCCTGACCCGCGATCTCGACGATCAGAAGAGAGTGACGAACGAAGCAC
TCGCCAAGGTCGATATCCTGAACCAGCAACTCCTCGCATTGCGCCGTCAG
ATCGCCGCCCTCAACGACGCGCTCGAAGCCTCCGAGAGGAAGGATCGCGA
CGCGCAGGACCGCATCAAGGATCTGGGCTCACGCCTCAACGCGGCGCTGG
CGCGTCAGGTCCAGGAATTGCAGCGCTACCGCTCCGACTTCTTCGGCCGC
CTCCGCGAACTCCTGAAGGACCGCAAGGACATCCGCGTCGTCGGCGATCG
CTTCGTATTCCAATCCGAGGTGCTGTTCCCGTCCGGTCAGGCGACAATGA
CGGTCGAAGGCCTTCAGGCGATCGACCAGCTCGCCGACGCCATCGTCACG
CTCGAACGCTCGATCCCCCCGGAGATCGACTGGACATTGCAGGTCGATGG
CCACACCGAC
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