mRNA_P-wetherbeei_contig1878.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: D8LJR7_ECTSI (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR7_ECTSI) HSP 1 Score: 266 bits (680), Expect = 3.740e-84 Identity = 137/216 (63.43%), Postives = 147/216 (68.06%), Query Frame = 1
Query: 295 KRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKV 942
KRTDY+ WDDYFMSVA+LSAMRSKDPSTQVGACIVN DKRIVGIGYNGFPMGCSDD LPWAR AD+ELDTKYP YVCHAEMNAILNKNSADV+GC IYVALFPCNECAKLIIQSGIREVV+LSDKY ++ SM ASRRLF L+GV+CRQH P + ITIDFS
Sbjct: 121 KRTDYLVWDDYFMSVAFLSAMRSKDPSTQVGACIVNEDKRIVGIGYNGFPMGCSDDDLPWARQADDELDTKYP------------------------------------------------------YVCHAEMNAILNKNSADVKGCLIYVALFPCNECAKLIIQSGIREVVYLSDKYRETNSMKASRRLFDLSGVKCRQHIPKQDKITIDFSST 282
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A7SGH8_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SGH8_NEMVE) HSP 1 Score: 252 bits (644), Expect = 8.230e-80 Identity = 133/248 (53.63%), Postives = 161/248 (64.92%), Query Frame = 1
Query: 208 VEEIGAVSKGGLSTKRPRSSESTTAAPVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKVGGR 951
+EE G V++ G T+ P + EST + KRTDY+SWDDYFMSVA+LSA RSKDPS+QVGACIVN +++IVGIGYNG P GCSDD LPW R AD+ELDTKYP YVCHAEMNAILNKNSADV+GC +YVALFPCNEC+K+IIQ+G++EVVF+SDKYHD SM ASRRL LAGV+ RQ +P+ + I IDF+ + G+
Sbjct: 16 LEENG-VTENGNGTE-PETDEST-CKKLTKRTDYISWDDYFMSVAFLSAQRSKDPSSQVGACIVNKERKIVGIGYNGMPNGCSDDELPWNRHADDELDTKYP------------------------------------------------------YVCHAEMNAILNKNSADVKGCTVYVALFPCNECSKIIIQAGLKEVVFVSDKYHDKPSMKASRRLLDLAGVKYRQFKPSMEKIVIDFNSIDGK 206
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A835YZN4_9STRA (Deoxycytidylate deaminase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN4_9STRA) HSP 1 Score: 248 bits (634), Expect = 2.660e-78 Identity = 129/226 (57.08%), Postives = 145/226 (64.16%), Query Frame = 1
Query: 256 PRSSESTTAAPVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDF 933
P++ + T A G R DY+ WDDYFMSVA+LSAMRSKDPSTQVGACIVN DKRIVGIGYNGFP GCSD+ LPWAR A NELDTKYP YVCHAEMNAILNKN+ADVRGC IYVALFPC +CAKLIIQSGI VV++SDKY D+ + ASRR+ LAGVRCR+H AR+ +TIDF
Sbjct: 20 PQAVPAPTWAVGGARKDYLHWDDYFMSVAFLSAMRSKDPSTQVGACIVNPDKRIVGIGYNGFPAGCSDERLPWARAAPNELDTKYP------------------------------------------------------YVCHAEMNAILNKNAADVRGCTIYVALFPCADCAKLIIQSGIAHVVYVSDKYRDAPAFVASRRMLDLAGVRCRRHVSARRRVTIDF 191
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: UPI000A2A6C22 (deoxycytidylate deaminase n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6C22) HSP 1 Score: 243 bits (620), Expect = 4.060e-76 Identity = 127/251 (50.60%), Postives = 158/251 (62.95%), Query Frame = 1
Query: 205 DVEEIGAVSKGGLSTKRPRSSES--TTAAPVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKVGGR 951
++ + G++S+ S KR +E T V KRTDY+SWD+YFM+VA+LSA RSKDPS+QVGACIVNADK+IVGIGYNG P GCSDD LPW R A++ELDTKYP YVCHAEMNAILNKNSA+V+G +IYVALFPCNEC+K+IIQSG++EVV+ SDKYH SM ASRRL +AGV+ RQ+ P + I +DF+ + G+
Sbjct: 15 NILKNGSLSEQNDSIKRKSDTEDGITKKQKVSKRTDYLSWDEYFMAVAFLSAQRSKDPSSQVGACIVNADKKIVGIGYNGMPNGCSDDLLPWNREANDELDTKYP------------------------------------------------------YVCHAEMNAILNKNSAEVKGASIYVALFPCNECSKIIIQSGVKEVVYASDKYHTKPSMIASRRLLDMAGVKHRQYTPPKSQIVVDFTAIDGK 211
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A3B3Z903_9GOBI (dCMP deaminase n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B3Z903_9GOBI) HSP 1 Score: 240 bits (613), Expect = 2.540e-75 Identity = 118/222 (53.15%), Postives = 145/222 (65.32%), Query Frame = 1
Query: 277 TAAPVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKV 942
T++P KR D++ W +YFM+VA+LSA RSKDP++QVGACIVN + +IVGIGYNG P GCSDD LPW+RTAD++LDTKYP YVCHAE+NAI+NKNSADV+GC +YVALFPCNECAKLIIQ+GI+EVV+LSDKYHD+ MTASRRL +AGV+ RQ +P R I IDF+ +
Sbjct: 17 TSSPSRKRQDFLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNQENKIVGIGYNGMPNGCSDDLLPWSRTADDQLDTKYP------------------------------------------------------YVCHAELNAIMNKNSADVKGCTLYVALFPCNECAKLIIQAGIKEVVYLSDKYHDTPGMTASRRLLSMAGVQFRQFKPKRTEIVIDFNSI 184
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A7L4MV06_9AVES (DCTD deaminase (Fragment) n=1 Tax=Ceyx cyanopectus TaxID=390723 RepID=A0A7L4MV06_9AVES) HSP 1 Score: 239 bits (611), Expect = 2.980e-75 Identity = 119/223 (53.36%), Postives = 141/223 (63.23%), Query Frame = 1
Query: 283 APVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKVGGR 951
A KR DY+ W +YFM+VA+LSA RSKDPS+QVGACIVNA+ +IVGIGYNG P GCSDD LPW RTA+N LDTKYP YVCHAE+NAI+NKNSADV+GC++YVALFPCNECAKLIIQ+GI+EV+FLSDKYHDS MTA+RR+F LAG+ R+ +P I IDF + R
Sbjct: 5 ASCRKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNAENKIVGIGYNGMPNGCSDDVLPWTRTAENRLDTKYP------------------------------------------------------YVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFLSDKYHDSTEMTAARRMFDLAGIVYREFKPKCNKIIIDFDSINSR 173
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A3P9ADY7_ESOLU (CMP/dCMP-type deaminase domain-containing protein n=3 Tax=Esox lucius TaxID=8010 RepID=A0A3P9ADY7_ESOLU) HSP 1 Score: 240 bits (612), Expect = 4.390e-75 Identity = 117/232 (50.43%), Postives = 147/232 (63.36%), Query Frame = 1
Query: 247 TKRPRSSESTTAAPVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKV 942
T + + ++++AP KR DY+ W +YFM+VA+LSA RSKDPS+QVGACIVN + +IVGIGYNG P GC DD LPW+R AD+ LDTKYP YVCHAE+NAI+NKNSADV+GC++YVALFPCNECAKLIIQ+GI+EV++LSDKYHD+ MTASRRL LAG+ +Q +P R I IDF+ +
Sbjct: 9 TSQVNGTSASSSAPTKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNPENKIVGIGYNGMPNGCDDDLLPWSRYADDRLDTKYP------------------------------------------------------YVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIYLSDKYHDTTEMTASRRLLNLAGIEYKQFKPKRNKIVIDFNSI 186
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A7N6ALS8_ANATE (dCMP deaminase n=2 Tax=Anabas testudineus TaxID=64144 RepID=A0A7N6ALS8_ANATE) HSP 1 Score: 239 bits (611), Expect = 4.450e-75 Identity = 117/216 (54.17%), Postives = 140/216 (64.81%), Query Frame = 1
Query: 295 KRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKV 942
KR DY+ W +YFM+VA+LSA RSKDPS+QVGACIVN + +IVGIGYNG P GC+DD LPW+R+ADN LDTKYP YVCHAE+NAI+NKNSADV+GC +YVALFPCNECAKLIIQ+GI+EVV+LSDKYHD+L MTASR L +AG++CRQ P R I IDF+ +
Sbjct: 19 KREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNQENKIVGIGYNGMPNGCNDDLLPWSRSADNRLDTKYP------------------------------------------------------YVCHAELNAIMNKNSADVKGCIMYVALFPCNECAKLIIQAGIKEVVYLSDKYHDTLEMTASRTLLNMAGIQCRQFTPKRTKIVIDFNSI 180
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A484DM73_PERFV (CMP/dCMP-type deaminase domain-containing protein n=9 Tax=Percomorphaceae TaxID=1489872 RepID=A0A484DM73_PERFV) HSP 1 Score: 239 bits (610), Expect = 6.300e-75 Identity = 118/216 (54.63%), Postives = 140/216 (64.81%), Query Frame = 1
Query: 295 KRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKV 942
KR DY+ W +YFM+VA+LSA RSKDPS+QVGACIVN + +IVGIGYNG P GC DD LPW+R+ADN+LDTKYP YVCHAEMNAI+NKNSADV+GC +YVALFPCNECAKLIIQSGI+EVV+LSDKYHD+ M ASRRL G+AG++ RQ +P R I IDF+ +
Sbjct: 19 KREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNQENKIVGIGYNGMPNGCDDDLLPWSRSADNQLDTKYP------------------------------------------------------YVCHAEMNAIMNKNSADVKGCTMYVALFPCNECAKLIIQSGIKEVVYLSDKYHDTPEMAASRRLLGMAGIQNRQFKPKRTEIVIDFNSI 180
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Match: A0A7L1X8M3_9AVES (DCTD deaminase (Fragment) n=2 Tax=Archosauria TaxID=8492 RepID=A0A7L1X8M3_9AVES) HSP 1 Score: 238 bits (607), Expect = 1.200e-74 Identity = 116/222 (52.25%), Postives = 141/222 (63.51%), Query Frame = 1
Query: 286 PVGKRTDYVSWDDYFMSVAYLSAMRSKDPSTQVGACIVNADKRIVGIGYNGFPMGCSDDALPWARTADNELDTKYPVNCKEQRFPKTIELYYLFPLLSLSCWPCLSLTSSSLFSWFFSSLSHIASLPFLQYVCHAEMNAILNKNSADVRGCAIYVALFPCNECAKLIIQSGIREVVFLSDKYHDSLSMTASRRLFGLAGVRCRQHRPARQTITIDFSKVGGR 951
P KR DY+ W +YFM+VA+LSA RSKDPS+QVGACIVN++ +IVGIGYNG P GCSDD LPW RTA+N LDTKYP YVCHAE+NAI+NKNSADV+GC++YVALFPCNECAKLIIQ+GI+EV+F+SDKYHD+ MTA+RR+F LAG+ R+ +P I IDF + R
Sbjct: 6 PCKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWTRTAENRLDTKYP------------------------------------------------------YVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTTEMTAARRMFDLAGIVYREFKPKCNKIIIDFDSINSR 173 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1878.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1878.3.1 >prot_P-wetherbeei_contig1878.3.1 ID=prot_P-wetherbeei_contig1878.3.1|Name=mRNA_P-wetherbeei_contig1878.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=289bp MPPPADDGAACDACACSSSQELADAYSTRSSANLPLSPGDVEEIGAVSKGback to top mRNA from alignment at P-wetherbeei_contig1878:3045..4168+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1878.3.1 ID=mRNA_P-wetherbeei_contig1878.3.1|Name=mRNA_P-wetherbeei_contig1878.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1124bp|location=Sequence derived from alignment at P-wetherbeei_contig1878:3045..4168+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1878:3045..4168+ >mRNA_P-wetherbeei_contig1878.3.1 ID=mRNA_P-wetherbeei_contig1878.3.1|Name=mRNA_P-wetherbeei_contig1878.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig1878:3045..4168+ (Phaeothamnion wetherbeei SAG_119_79)back to top |