mRNA_P-wetherbeei_contig1877.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1877.1.1 vs. uniprot
Match: A0A7S2UZM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZM4_9STRA) HSP 1 Score: 179 bits (453), Expect = 7.090e-47 Identity = 93/207 (44.93%), Postives = 129/207 (62.32%), Query Frame = 3
Query: 1281 GAMRSYDRLLREHYYKVNFLQATTLGVTGDLIAQCVERISGRVPPPCVGXXXXXXXXXRRRAPFGLDLRRTADVGILTMIIDGVLTPQWYTLMERLSAAKTVPVALLKTLLGTVVYGPIANGIFLAGVPVMRFGFGGIRAGGFDLAAWRRQLLVASVRDLQMWPPFNFLNFWLVPMHWRPLAANFVGLGFVAVLS-ATGLSDEVLPF 1898
G + YD LLR HY ++F QAT LGV GDL+AQ +E RR +++RT VG LTM+IDG+ TP +Y +E +S +T+PV LLKT +GT ++GP+ANG+FLAGVP+++ G ++ F+ A+W+ QLLVA++RDLQ+WP + LNF L+P HWRPLA++ LG + L ATG S PF
Sbjct: 139 GLFKKYDNLLRRHYLSMSFAQATVLGVLGDLLAQGIE-----------------LRLFRR----SYNVKRTMHVGFLTMLIDGLATPHYYNALELISEKRTMPVVLLKTFIGTAIFGPVANGVFLAGVPLLQHGLDIVKM--FNFASWKHQLLVATIRDLQIWPLLDMLNFKLLPKHWRPLASSLAALGVITFLGFATGFSQTTTPF 322
BLAST of mRNA_P-wetherbeei_contig1877.1.1 vs. uniprot
Match: A0A6H5JL38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL38_9PHAE) HSP 1 Score: 181 bits (460), Expect = 7.740e-47 Identity = 98/218 (44.95%), Postives = 126/218 (57.80%), Query Frame = 3
Query: 1269 NMLGGAMRSYDRLLREHYYKVNFLQATTLGVTGDLIAQCVERISGRVPPPCVGXXXXXXXXXRRRAPFGLDLRRTADVGILTMIIDGVLTPQWYTLMERLSAAKTVPVALLKTLLGTVVYGPIANGIFLAGVPVMRFGFGGIRAGGFDLAAWRRQLLVASVRDLQMWPPFNFLNFWLVPMHWRPLAANFVGLGFVAVLSATGLSDEVLPFGAGVVLLL 1922
N GA+ SYD LL EHY K++F QAT LGV GD +AQ +ER R + RT GIL MIIDG+ TP WY L++ ++ T+ +A K + +V Y P ANG+FLAG V+R+GF F A WRRQL V ++RD +MWPP + LNFWLVP HWRPLA + G+ +AV+S TGL+D LP G V L+
Sbjct: 213 NPFKGALGSYDALLEEHYLKMSFGQATALGVVGDTVAQRLERW--------------------RNPGQRYEFLRTVHAGILNMIIDGIFTPHWYNLVDYVNDEMTLGLAFAKAVASSVFYSPFANGLFLAGARVLRYGF----KTRFGWAVWRRQLTVCTIRDFEMWPPLHVLNFWLVPKHWRPLAGHLAGVVLLAVISCTGLTDAGLPLGQRAVPLM 406
BLAST of mRNA_P-wetherbeei_contig1877.1.1 vs. uniprot
Match: A0A835YIQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIQ1_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.480e-37 Identity = 72/140 (51.43%), Postives = 98/140 (70.00%), Query Frame = 3
Query: 1476 LDLRRTADVGILTMIIDGVLTPQWYTLMERLSAAKTVPVALLKTLLGTVVYGPIANGIFLAGVPVMRFGFGGIRAGGFDLAAWRRQLLVASVRDLQMWPPFNFLNFWLVPMHWRPLAANFVGLGFVAVLSATGLSDEVLP 1895
LD+RR DVG+LTM IDGV+TP+WY ++ER S +K +PV + KT+ +++YGP ANG+FLAGVPV+R+G + GFD AWRRQLL+A++RDLQ+ P F N LVP ++PL F +GF VLS ++ LP
Sbjct: 5 LDVRRMVDVGLLTMAIDGVITPRWYAILERTSTSKALPVVVAKTVASSLIYGPFANGVFLAGVPVLRYGRA-VLGRGFDWVAWRRQLLIATIRDLQLVTPCEFFNQLLVPFKYQPLGYQFSEIGFHIVLSLIAHNEMELP 143
BLAST of mRNA_P-wetherbeei_contig1877.1.1 vs. uniprot
Match: D8LNF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF3_ECTSI) HSP 1 Score: 117 bits (293), Expect = 3.270e-27 Identity = 57/114 (50.00%), Postives = 75/114 (65.79%), Query Frame = 3
Query: 1581 TVPVALLKTLLGTVVYGPIANGIFLAGVPVMRFGFGGIRAGGFDLAAWRRQLLVASVRDLQMWPPFNFLNFWLVPMHWRPLAANFVGLGFVAVLSATGLSDEVLPFGAGVVLLL 1922
T+ +A +K + +V Y P ANG+FLAG V+R+GF F A WRRQL V ++RD +MWPP + LNFWLVP HWRPLA + G+ +AV+S TGL+D LP G V L+
Sbjct: 2 TLGLAFVKAVASSVFYSPFANGLFLAGARVLRYGF----KTRFGWAEWRRQLTVCTIRDFEMWPPLHVLNFWLVPKHWRPLAGHLAGVVLLAVISCTGLTDAGLPLGQRAVPLM 111
BLAST of mRNA_P-wetherbeei_contig1877.1.1 vs. uniprot
Match: W7U6G1_9STRA (Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6G1_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.580e-7 Identity = 50/193 (25.91%), Postives = 80/193 (41.45%), Query Frame = 3
Query: 1290 RSYDRLLREHYYKVNFLQATTLGVTGDLIAQCVERISGRVPPPCVGXXXXXXXXXRRRAPFGLDLRRTADVGILTMIIDGVLTPQWYTLMERLSAAKTVPVALLKTLLGT-VVYGPIANGIFLAGVPVMRFGFGGIRAGGFDLAAWRRQLLVASVRDLQMWPPFNFLNFWLVPMHWRPLAANFVGLGFVAVLS 1865
++Y + E + N + + GD I+Q +E + C L LRR A+ G + +GVL PQWY L+ +LS P + +LG V +G + N +A MR G + A RR L + D ++WP ++ L F +P H L+ +G+ + LS
Sbjct: 93 KAYSNWMMEQPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRD-------------LSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMA----MRRVLDGESWHDAEQAV-RRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLS 267
BLAST of mRNA_P-wetherbeei_contig1877.1.1 vs. uniprot
Match: B7PWB8_IXOSC (Uncharacterized protein (Fragment) n=6 Tax=Ixodes TaxID=6944 RepID=B7PWB8_IXOSC) HSP 1 Score: 61.6 bits (148), Expect = 3.900e-7 Identity = 47/184 (25.54%), Postives = 80/184 (43.48%), Query Frame = 3
Query: 1305 LLREHYYKVNFLQATTLGVTGDLIAQCVERISGRVPPPCVGXXXXXXXXXRRRAPFGLDLRRTADVGILTMIIDGVLTPQWYTLMERLSAAKTVPVALLKTLLGTVVYGPIANGIFLAGVPVMRFGFGGIRAGGFDLAA--WRRQLLVASVRDLQMWPPFNFLNFWLVPMHWRPLAANFVGLGF 1850
L H N +T +GV GDL+ Q E +SG + RT +G + G+++ WY L++R +++ LLK L VV+ PI ++ V ++ R+G ++ + W + + V + +WPP FLNF+++P+ +R N V GF
Sbjct: 27 LFGRHLVLTNATISTVMGVAGDLVQQHYEILSGHQAQ--------------------VSSVRTFHMGAAGLTT-GMISHYWYVLLDRWMLGRSLRTVLLKVLYDQVVFSPINLTVYFGTVGILE------RSGWAEMRSEIWAKGCTIYKV-EWFIWPPAQFLNFYVLPLRYRVFFDNLVSFGF 182
BLAST of mRNA_P-wetherbeei_contig1877.1.1 vs. uniprot
Match: A0A835BR74_9POAL (Uncharacterized protein n=3 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835BR74_9POAL) HSP 1 Score: 59.7 bits (143), Expect = 4.080e-6 Identity = 38/130 (29.23%), Postives = 66/130 (50.77%), Query Frame = 3
Query: 1476 LDLRRTADVGILTMIIDGVLTPQWYTLMERLSAAKTVPVALLKTLLGTVVYGPIANGIFLAGVPVMRFGFGGIRAGGFDLAAWRRQLLVASVRDLQMWPPFNFLNFWLVPMHWRPLAANFVGLGFVAVLS 1865
LD RRT L + + G WY + +L A+ + +L ++ PI G+F++ + F G + + +++ L + + + Q+W PF FLNF+ VP+ ++ LAANFV L + +LS
Sbjct: 125 LDFRRTFVFTFLGLALVGPTLHVWYLYLSKLVTVSGASGAIARLILDQFIFSPIFIGVFMS----LLVTFEGKPS--LVVPKLKQEWLSSVLANWQLWIPFQFLNFYFVPLKFQVLAANFVALAWNVILS 248
BLAST of mRNA_P-wetherbeei_contig1877.1.1 vs. uniprot
Match: UPI0015A8ED76 (mpv17-like protein 2 n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A8ED76) HSP 1 Score: 57.0 bits (136), Expect = 1.590e-5 Identity = 45/182 (24.73%), Postives = 79/182 (43.41%), Query Frame = 3
Query: 1305 LLREHYYKVNFLQATTLGVTGDLIAQCVERISGRVPPPCVGXXXXXXXXXRRRAPFGLDLRRTADVGILTMIIDGVLTPQWYTLMERLSAAKTVPVALLKTLLGTVVYGPIANGIFLAGVPVMRFGFGGIRAGGFDLAAWRRQLLVASVRDLQMWPPFNFLNFWLVPMHWRPLAANFVGLGF 1850
L R+H N + +G+ GDL+ Q E + GR R A + G+ T GVL+ WY +++ ++ + K L +++ P+ ++ V V+ G ++ +L A Q+ A + +WPP F+NF+L+P+ +R L NF+ GF
Sbjct: 23 LFRKHLLLTNATFSVAMGIAGDLVQQHYEILIGR----------EDSWKPVRTA-------HMSAAGLTT----GVLSHYWYIIIDIFIPGSSLKCVIKKVLYDQILFSPVNLTVYFGTVAVLE---GSLKQLKEELLAKGSQIYTA---EWLIWPPAQFVNFYLLPLRYRVLFDNFISFGF 177 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1877.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1877.1.1 >prot_P-wetherbeei_contig1877.1.1 ID=prot_P-wetherbeei_contig1877.1.1|Name=mRNA_P-wetherbeei_contig1877.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=439bp MAIKRCRMRRAAILLICLLVLLAPFHGTARDVAHADNNEAADADASLHVSback to top mRNA from alignment at P-wetherbeei_contig1877:323..3515+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1877.1.1 ID=mRNA_P-wetherbeei_contig1877.1.1|Name=mRNA_P-wetherbeei_contig1877.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3193bp|location=Sequence derived from alignment at P-wetherbeei_contig1877:323..3515+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1877:323..3515+ >mRNA_P-wetherbeei_contig1877.1.1 ID=mRNA_P-wetherbeei_contig1877.1.1|Name=mRNA_P-wetherbeei_contig1877.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1317bp|location=Sequence derived from alignment at P-wetherbeei_contig1877:323..3515+ (Phaeothamnion wetherbeei SAG_119_79)back to top |