mRNA_P-wetherbeei_contig1868.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1868.3.1 vs. uniprot
Match: A0A6H5K262_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K262_9PHAE) HSP 1 Score: 177 bits (448), Expect = 4.520e-46 Identity = 97/204 (47.55%), Postives = 128/204 (62.75%), Query Frame = 1
Query: 10 ALEWIVYSDLLETRIGEEQDYSFGRYASAAAAGVHTLCRVATRPPLAMPRRDFEVSQERQRKLGILRAFMDGMALGSGCRGTSEVALDLLSCLCDIVAPPLRPVNPDLLTPIERQTLQGLVSVLLSCGLTFAPAPAAAAGPAPWVTAVAWAQQQQGMVEYLLEPGVHQLVTYAGHSYCHKMLSNTARQTVAHEVKLEAMRRAEA 621
A++W+ +DL++TR + QDYSF RYA AAAGVH LCR R + P++D+E R K IL +F DG LG+ R T + LD+LS L DI+AP LRP+NPDLL+P ER + LV +LLSCGLTF+P A+++ A A A G E+ LEP + QL+ Y G+ + H L+ R VAHEV LE MR+AEA
Sbjct: 636 AMDWLEMADLMDTRTNQTQDYSFSRYAPVAAAGVHFLCRSDQRSTVTQPKKDYEARTARAAKSNILHSFADGRQLGATGRTTQALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRELVGILLSCGLTFSPQSASSSSSASAPPAFGAAT---GAQEFALEPAIDQLLKYEGYEFAHPRLAPPLRPMVAHEVALEGMRKAEA 836
BLAST of mRNA_P-wetherbeei_contig1868.3.1 vs. uniprot
Match: A0A4D9CU49_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU49_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.400e-18 Identity = 57/136 (41.91%), Postives = 84/136 (61.76%), Query Frame = 1
Query: 10 ALEWIVYSDLLETRIGEEQDYSFGRYASAAAAGVHTLCRVATRPPLAMPRRDFEVSQERQRKLGILRAFMDGMALGS-GCRGTSEVALDLLSCLCDIVAPPLRPVNPDLLTPIERQTLQGLVSVLLSCGLTFAPAP 414
A EW+ +SDL++ R E + + AAA +H LCRV TRP LA+PR+D E R + IL++F +G +L + R + V LD++S L I+ P LRPVNPDL + E+ L+ LV VLL+CG+++ +P
Sbjct: 776 AAEWLAFSDLVQGRQMEGHHVMEDLHLATAAA-LHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQAMWARRPTPVVLDVVSPLMHILNPNLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSP 910
BLAST of mRNA_P-wetherbeei_contig1868.3.1 vs. uniprot
Match: W7TIW5_9STRA (Chromosome transmission fidelity n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIW5_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 7.160e-18 Identity = 57/136 (41.91%), Postives = 83/136 (61.03%), Query Frame = 1
Query: 10 ALEWIVYSDLLETRIGEEQDYSFGRYASAAAAGVHTLCRVATRPPLAMPRRDFEVSQERQRKLGILRAFMDGMALGS-GCRGTSEVALDLLSCLCDIVAPPLRPVNPDLLTPIERQTLQGLVSVLLSCGLTFAPAP 414
A EW+ +SDL+ R E + + AAA +H LCRV TRP LA+PR+D E R + IL++F +G +L + R + V LD++S L I+ P LRPVNPDL + E+ L+ LV VLL+CG+++ +P
Sbjct: 375 AAEWLAFSDLVHGRQMEGLHVMEDLHLATAAA-LHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSP 509
BLAST of mRNA_P-wetherbeei_contig1868.3.1 vs. uniprot
Match: UPI00187A781C (chromosome transmission fidelity protein 18 homolog isoform X1 n=14 Tax=Manis TaxID=9973 RepID=UPI00187A781C) HSP 1 Score: 89.7 bits (221), Expect = 3.930e-16 Identity = 62/207 (29.95%), Postives = 94/207 (45.41%), Query Frame = 1
Query: 10 ALEWIVYSDLLETRIGEEQDYSFGRYASAAAAGVHTLCRVATRPPLAMPRRDFEVSQERQRKLGILRAFMDGMALGSGCRGTSE-VALDLLSCLCDIVAPPLRPVNPDLLTPIERQTLQGLVSVLLSCGLTFAPAPAAAAGPAPWVTAVAWAQQQQGMVEYLLEPGVHQLVTYAGHSYCHKMLSNTARQTVAHEVKLEAMRRAEARA 627
AL+W+ + D+L Q + RY A H L + P + P E R +++ + G+A + R T + + LD L L DI+ P LRPV+ L + E+Q L LV +L+ LT+ + G+ Y LEP V +L + K L+ A+Q +AHE+++E MRRAEARA
Sbjct: 697 ALDWLAFDDMLGRAAHRGQSFQLLRYLPFLPAAFHLLFASSRTPRVVFPSSQQEAQSRTSRMQNLIQTLVSGIAPATRSRATPQALVLDTLCLLLDILTPKLRPVSTQLFSAREKQQLASLVGTMLAYSLTYRQE-----------------RMPDGLYVYRLEPNVEELCRFP-ELPTRKPLTYQAQQLIAHEIEMEKMRRAEARA 885
BLAST of mRNA_P-wetherbeei_contig1868.3.1 vs. uniprot
Match: A0A2D4BXK8_PYTIN (Chromosome transmission fidelity protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXK8_PYTIN) HSP 1 Score: 86.3 bits (212), Expect = 5.620e-15 Identity = 61/210 (29.05%), Postives = 111/210 (52.86%), Query Frame = 1
Query: 16 EWIVYSDLLETRIGEEQDYSFGRYASAAAAGVHTLCRVATRPPLAMPRRDFEVSQERQRKLGILRAFMDGMAL-GSGCRGTSEVALDLLSCLCDIVAPPLRPVNPDLLTPIERQTLQGLVSVLLSCGLTFAPAPAAAAGPAPWVTAVAWAQQQQGMVEYLLEPGVHQLVTYA-----GHSYCHKMLSNTARQTVAHEVKLEAMRRAEARA 627
EW+ +D +TR EQ ++F YA AA VH C +TR L P+ E S++++R +L+A ++ L S + +ALD++ L ++PP+R V+ + +P E+ +++ L++++ S GL+F P +A G + +LEP +H+L+ + ++ + ML + R+ +A EV+LE MR++E A
Sbjct: 625 EWMGIADEWDTRTRTEQQFAFMAYAPFAARAVHLACCTSTRRRLEYPKTMAESSKKQERTTNVLQAVVENSHLVPSMXQSIPVLALDVVPWLLASLSPPIRNVSANAQSPDEKASIERLIALMSSLGLSFRPKFSA-----------------DGSEDLILEPPLHELMVFREPGVDDNALRYAMLPLSVRKFIAREVELEHMRKSEGDA 817
BLAST of mRNA_P-wetherbeei_contig1868.3.1 vs. uniprot
Match: UPI00033167F5 (chromosome transmission fidelity protein 18 homolog n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI00033167F5) HSP 1 Score: 81.6 bits (200), Expect = 1.930e-13 Identity = 59/207 (28.50%), Postives = 92/207 (44.44%), Query Frame = 1
Query: 10 ALEWIVYSDLLETRIGEEQDYSFGRYASAAAAGVHTLCRVATRPPLAMPRRDFEVSQERQRKLGILRAFMDGMALGSGCRGTSE-VALDLLSCLCDIVAPPLRPVNPDLLTPIERQTLQGLVSVLLSCGLTFAPAPAAAAGPAPWVTAVAWAQQQQGMVEYLLEPGVHQLVTYAGHSYCHKMLSNTARQTVAHEVKLEAMRRAEARA 627
AL+W+ + DLL+ Q + RY H L + P + P E R +++ + G+ + + + LD L L DI+AP LRPV+ L + E++ L LV +L+ LT+ + +G Y LEP V ++ + K L+ A+Q +AHEV++E MRRAEARA
Sbjct: 561 ALDWLAFDDLLQRAALRGQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEAQSRTARTQNLIQTLVSGIVPSTRSWAMPQALVLDTLCLLLDILAPRLRPVSTQLFSTREKEQLASLVGTMLAYSLTYRQE-----------------RTPEGQYVYRLEPNVEEVCRFP-ELPVRKPLTYQAKQLIAHEVEVEKMRRAEARA 749
BLAST of mRNA_P-wetherbeei_contig1868.3.1 vs. uniprot
Match: A0A8J1UPA6_OWEFU (Ofus.G16810 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UPA6_OWEFU) HSP 1 Score: 80.1 bits (196), Expect = 6.550e-13 Identity = 55/210 (26.19%), Postives = 98/210 (46.67%), Query Frame = 1
Query: 10 ALEWIVYSDLLETRIGEEQDYSFGRYASAAAAGVHTLCRVATRPPLAMPRRDFEVSQERQRKLGILRAFMDGMALGSGCRGTSE------VALDLLSCLCDIVAPPLRPVNPDLLTPIERQTLQGLVSVLLSCGLTFAPAPAAAAGPAPWVTAVAWAQQQQGMVEYLLEPGVHQLVTYAGHSYCHKMLSNTARQTVAHEVKLEAMRRAEA 621
A EW ++DLL + Q+Y RY H + P L P E++ + + ++ A M+ M C T + + +D+L L DI+ P LRPVN L + E+++L+ L+ ++++ LT+ + +G +Y+L+PGV ++ + G + L+ +A+Q +A E+ LE MRR E+
Sbjct: 687 ANEWFCFADLLNRETAQHQNYILQRYVPYLMVTSHLIFATNHVPKLQYPTVQNEITTKLGKSSHLVEAMMNEM-----CPNTRKFVNYNMIVMDILPHLIDIIQPTLRPVNTQLYSAREKESLEQLIRIMIAYNLTYHQE-----------------KTPEGQYQYILDPGVDEVSRFPGMKPS-RQLTYSAKQVIAREIDLEKMRRTES 873
BLAST of mRNA_P-wetherbeei_contig1868.3.1 vs. uniprot
Match: A0A485L2M2_9STRA (Aste57867_15203 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2M2_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.150e-11 Identity = 62/208 (29.81%), Postives = 102/208 (49.04%), Query Frame = 1
Query: 10 ALEWIVYSDLLETRIGEEQDYSFGRYASAAAAGVHTLCRVATRPPLAMPRRDFEVSQERQRKLGILRAFMD-GMALGSGCRGTSEVALDLLSCLCDIVAPPLRPVNPDLLTPIERQTLQGLVSVLLSCGLTFAPAPAAAAGPAPWVTAVAWAQQQQGMVEYLLEPGVHQLVTYAGHSYCHKMLSNTARQTVAHEVKLEAMRRAEARAN 630
AL+W+ ++DL+ETR+ Q ++ Y S AA VH C +R + PR +E ++ + G+L AF++ G+ L G R + LD++ + ++ P L TP +++ + LV+++ S L++ VT G+VE+ LEP + LV + L RQT+A EV+LE MRRA+ N
Sbjct: 520 ALQWMEFADLVETRVRSHQQFALMPYGSVAAVAVHRACCTGSRRRIEYPRAHYEYRKQIETTRGVLDAFLEPGINLRLGAR---VLTLDVVPSIVAMLNPVLTS------TPNDKEPMDRLVALMSSLHLSYKQ-----------VT------MPGGVVEFSLEPALDMLVKFK-QLEPRPRLPLGIRQTMAREVELENMRRADKSNN 700
BLAST of mRNA_P-wetherbeei_contig1868.3.1 vs. uniprot
Match: A0A8B8CCD4_CRAVI (chromosome transmission fidelity protein 18 homolog n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8CCD4_CRAVI) HSP 1 Score: 74.3 bits (181), Expect = 5.270e-11 Identity = 49/204 (24.02%), Postives = 95/204 (46.57%), Query Frame = 1
Query: 10 ALEWIVYSDLLETRIGEEQDYSFGRYASAAAAGVHTLCRVATRPPLAMPRRDFEVSQERQRKLGILRAFMDGMALGSGCR-GTSEVALDLLSCLCDIVAPPLRPVNPDLLTPIERQTLQGLVSVLLSCGLTFAPAPAAAAGPAPWVTAVAWAQQQQGMVEYLLEPGVHQLVTYAGHSYCHKMLSNTARQTVAHEVKLEAMRRAE 618
A +W+ ++DLL + I Q+YS Y H L P + P + + +RQ+ + ++ + M M ++V +++L L +I+ P LRPVN L + E++ L L+ ++++ +T+ + +G Y+L+P + ++ + G HK L+ A+Q ++ E+ LE +RR E
Sbjct: 623 ANDWLCFTDLLNSEILSTQNYSIMPYIPYITVTFHLLFATNQVPRIQYPHAEHDAFTQRQKSVNLVTSLMADMLPSVRMFVNETDVVMEILPPLLEIIQPNLRPVNTQLYSAREKEDLAELIRIMIAYNMTYNQE-----------------KTPEGQYVYVLDPNMEEVARFTGMKQ-HKQLTYAAKQLISREIGLERLRRNE 808
BLAST of mRNA_P-wetherbeei_contig1868.3.1 vs. uniprot
Match: UPI0019A01327 (chromosome transmission fidelity protein 18 homolog isoform X1 n=2 Tax=Silurus meridionalis TaxID=175797 RepID=UPI0019A01327) HSP 1 Score: 73.6 bits (179), Expect = 9.650e-11 Identity = 52/199 (26.13%), Postives = 92/199 (46.23%), Query Frame = 1
Query: 13 LEWIVYSDLLETRIGEEQDYSFGRYASAAAAGVHTLCRVATRPPLAMPRRDFEVSQERQRKLGILRAFMDGMALGSGCR-GTSEVALDLLSCLCDIVAPPLRPVNPDLLTPIERQTLQGLVSVLLSCGLTFAPAPAAAAGPAPWVTAVAWAQQQQGMVEYLLEPGVHQLVTYAGHSYCHKMLSNTARQTVAHEVKLEAM 606
L+W+ +SDL+ + Q+YS RY A H L + P ++ P +E + Q L A + + R S + LD+LS L ++++P LRPVNP L + E+Q L L+ +++ LT+ + +G Y+LEP + +V ++G + L+ +Q ++ E ++E M
Sbjct: 659 LDWLCFSDLVNECVLHGQNYSLMRYLPFLPAAFHHLFAANSVPRISYPNSHYEGLMKTQHTKNALVAMVAEIPPSIRTRICQSNLCLDILSLLLELISPKLRPVNPQLYSTREKQQLCELIDTMINYNLTYRQE-----------------RTPEGQYTYVLEPNIEDVVRFSGLPP-RRQLTYQVKQLISRETEMERM 839 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1868.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1868.3.1 >prot_P-wetherbeei_contig1868.3.1 ID=prot_P-wetherbeei_contig1868.3.1|Name=mRNA_P-wetherbeei_contig1868.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=315bp SWGALEWIVYSDLLETRIGEEQDYSFGRYASAAAAGVHTLCRVATRPPLAback to top mRNA from alignment at P-wetherbeei_contig1868:1639..3346+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1868.3.1 ID=mRNA_P-wetherbeei_contig1868.3.1|Name=mRNA_P-wetherbeei_contig1868.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1708bp|location=Sequence derived from alignment at P-wetherbeei_contig1868:1639..3346+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1868:1639..3346+ >mRNA_P-wetherbeei_contig1868.3.1 ID=mRNA_P-wetherbeei_contig1868.3.1|Name=mRNA_P-wetherbeei_contig1868.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=945bp|location=Sequence derived from alignment at P-wetherbeei_contig1868:1639..3346+ (Phaeothamnion wetherbeei SAG_119_79)back to top |