mRNA_P-wetherbeei_contig1867.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1867.1.3
Unique NamemRNA_P-wetherbeei_contig1867.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1867.1.3 vs. uniprot
Match: A0A6H5JWH2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWH2_9PHAE)

HSP 1 Score: 720 bits (1858), Expect = 3.900e-241
Identity = 408/618 (66.02%), Postives = 477/618 (77.18%), Query Frame = 1
Query:    1 MVGWSGKRIKSLRLFREVNNDSFLPTRGFFSREHVPFLVLYAWALRWCFMTIGEQYHDALARAEEFGMELPGSIDRQRTTLNAMLAGVDITAKDADIGVKIASLPSEHLPGFWALLALGLVAIAHALMMLLQHWSVNMRCLIRFRPV-DAVERATHVRVTPRTTSGSSKTLLLPVKAGPLGPWFVFNRRKYVHDPRKDAFVKIRCATDLPLAHFRAWHGLPSEAAVEHTLVKFGPNRFEMAAPGFLELYRQQILSPFTIFQLFCSGLWLLDNYWTYSVFTLFMIFTFEATVVFQRIKNLGTLKGMGNESHPVSVHRAGRWRPLTTDQLLPGDLFSLRRTKANDVVPCDCLLVRGSAVVNEASLTGESVPQMKEGLGPALRAGGGQEEALGMKASHHKVHVLYGGTKILTSNSQVSRKKRELAQVQADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVIDTSAPVEPPPDGGCLCYVLRTGFASSQGKLVRMIEGSTETVRTDTRDTALLLLLLLAFAVCSSGYVLHEGMKSGNKRSKYELLLHCVLIVTTVIPPELPMQMALAVNSSLMTLLRMQVFCTEPYRIPMAGKVDTCLFDKTGTLTTDELVAVGV-APA 1848
            MV W+G RI++L L R++ +D +LPTRG  SRE+ PF V YAWAL+ CF+TIGEQY+DALA+AEE G  LP S D  R+ L A+L+G D  A++A  GVK   LP ++LPGFW +L L +V I H LM+LLQHWSV  RCL+RFRPV D   +ATH    P+   G+ KTLL+PV+  PLGP F F+RRKYV+D R  AFVKIRC  D PL+ +R W GLP+EAAVE   + +G NRFEM  P FL+LY+ Q+LSPFTIFQLF + LWLLD+YW Y +FTLFMI +FEATVV QR+KNL TLKGMGN+   + V RAGRW+  TT++LLPGDLFSLRR+K +D VPCDC+LV GSAV+NEA+LTGESVPQMKEG+   L +  G +E   MK  HHKV  L+GGTK+LT NSQ                XXXXXXXXXXXXXXXXXXXXXXXXXXXX +V       +  PDGGCLCYVLRTGF+SSQGKLVRMIEGSTETVRTDTRDT LLLLLLL FAV +S YVL EGMK   KRSKY+LLLHC+LIVT+VIPPELPMQMALAVNSSLM L++MQ+FCTEPYR+PMAGKVD CLFDKTGTLTTDELVAVGV APA
Sbjct:    1 MVAWTGSRIQALSLHRQIGSDGWLPTRGLLSRENYPFFVAYAWALQKCFLTIGEQYNDALAQAEEEGWALPNSEDSHRSALTALLSGHD--AEEATSGVKEVHLPWKYLPGFWPVLWLAVVFILHLLMVLLQHWSVAFRCLVRFRPVRDDPTQATHAMARPKPHCGNGKTLLVPVETSPLGPAFEFHRRKYVYDQRSQAFVKIRCRVDRPLSFYRRWRGLPTEAAVESARLMYGTNRFEMEMPKFLDLYKAQLLSPFTIFQLFSTALWLLDSYWQYFLFTLFMIASFEATVVMQRLKNLQTLKGMGNDVVNLKVFRAGRWQSSTTEELLPGDLFSLRRSKKHDTVPCDCMLVHGSAVLNEATLTGESVPQMKEGV---LASKDGGDEIFMMKEGHHKVFTLFGGTKLLTCNSQGQEAVDAGGDSDEGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVDVGDESWKETPDGGCLCYVLRTGFSSSQGKLVRMIEGSTETVRTDTRDTVLLLLLLLVFAVSASTYVLIEGMKDSAKRSKYQLLLHCILIVTSVIPPELPMQMALAVNSSLMALMKMQIFCTEPYRVPMAGKVDVCLFDKTGTLTTDELVAVGVEAPA 613          
BLAST of mRNA_P-wetherbeei_contig1867.1.3 vs. uniprot
Match: W7TW81_9STRA (p-atpase family transporter: cation n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW81_9STRA)

HSP 1 Score: 608 bits (1567), Expect = 1.370e-196
Identity = 330/627 (52.63%), Postives = 419/627 (66.83%), Query Frame = 1
Query:   10 WSGKRIKSLRLFREVNNDSFLPTRGFFSREHVPFLVLYAWALRWCFMTIGEQYHDALARAEEFGMELPGSIDRQRTTLNAML--AGVDITAKDADI-----GVKIAS---------LPSEHLPGFWALLALGLVAIAHALMMLLQHWSVNMRCLIRFRPVDAVERATHVRVTPRTTSGSSKTLLLPVKAGPLGPWFVFNRRKYVHDPRKDAFVKIRCATDLPLAHFRAWHGLPSEAAVEHTLVKFGPNRFEMAAPGFLELYRQQILSPFTIFQLFCSGLWLLDNYWTYSVFTLFMIFTFEATVVFQRIKNLGTLKGMGNESHPVSVHRAGRWRPLTTDQLLPGDLFSLRRTKAND-VVPCDCLLVRGSAVVNEASLTGESVPQMKEGLGPALRAGGGQEEALGMKASHHKVHVLYGGTKILTSNSQVSRKKRELAQVQADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVIDTSAPVEPPPDGGCLCYVLRTGFASSQGKLVRMIEGSTETVRTDTRDTALLLLLLLAFAVCSSGYVLHEGMKSGNKRSKYELLLHCVLIVTTVIPPELPMQMALAVNSSLMTLLRMQVFCTEPYRIPMAGKVDTCLFDKTGTLTTDELVAVGV 1839
            W+GKRI SL+L++ +         G  S EH+PF+VLYA    WC+ T+G+ Y  ALA+A+  G  LP +++  R + +A L  A VD +A + +      G+  A+         LPS +LPGFW L ALG VA  HAL++LLQ W V+++C +R+RPV  V  ATH+R+ PR   G  K  LLP++ G LG WF+  RR+Y++ P K+ F KIRC  D PLA F  W G  ++  V     +FG N FE+  P F++LY+QQ+LSPFT+FQLFC  LW LD+YW YSVFTLFMIF+FEA+VV QRIKNL  LKGM N+   V V R  RW    T +L+PGD+FSL +T  ND +VPCDCLL++GS VVNEA+LTGES+PQMKE L      GG   E L +K+   KVHV++GGT++L  ++       E+   +                                   +D    + PPPD GC+CY LRTGF+SSQGKLVRMIEGSTE VRTDTRDTALLLLLLL FA+ +SGYVL +GM+ G+K SKY+LLLHCVLIVT+VIPPELPMQMALAVNS+L+TL++MQ+FCTEP+R+P AGKVD CLFDKTGTLTTDELVAVGV
Sbjct:  101 WTGKRILSLQLYQNIGGLF----GGLISWEHLPFMVLYAVVFHWCYTTMGDPYQQALAKADSEGASLPHTVEHLRASASAFLLKAPVDPSAAEKEAPFSFWGMGEANNEPAVPDYYLPSPYLPGFWPLFALGSVATLHALILLLQVWVVDIKCWVRYRPVRNVSEATHLRIVPRAFRG--KKQLLPLERGGLGTWFLLERRRYLYIPEKETFQKIRCKVDWPLAFFGKWRGFATDGEVMDAQERFGKNLFEITLPAFMDLYKQQLLSPFTVFQLFCVILWCLDSYWQYSVFTLFMIFSFEASVVMQRIKNLNVLKGMDNKVLDVLVFRNRRWEVTRTTELVPGDVFSLLKTPENDGIVPCDCLLLQGSTVVNEATLTGESIPQMKEALAKGEGEGG---EVLDIKSGTGKVHVMFGGTRLLQVSAGGGSNTVEVLDDEERAEEGEASLHGPHATEGQEKDGGSEEGENGESVSMDEEG-IPPPPDHGCVCYALRTGFSSSQGKLVRMIEGSTEGVRTDTRDTALLLLLLLLFAIAASGYVLKKGMERGDK-SKYQLLLHCVLIVTSVIPPELPMQMALAVNSALLTLIKMQIFCTEPFRVPAAGKVDVCLFDKTGTLTTDELVAVGV 716          
BLAST of mRNA_P-wetherbeei_contig1867.1.3 vs. uniprot
Match: A0A836CGN5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN5_9STRA)

HSP 1 Score: 575 bits (1481), Expect = 3.720e-182
Identity = 344/700 (49.14%), Postives = 405/700 (57.86%), Query Frame = 1
Query:  142 CFMTIGEQYHDALARAEEFGMELPGSIDRQRTTLNAMLAGVDITAKDADIG-------VKIASLPSEHLPGFWALLALGLVAIAHALMMLLQHWSVNMRCLIRFRPVDAVER----------------ATHVRVTPRTTSGSSKTLLLPVKAGPLGPWFVFNRRKYVHDPRKDAFVKIRCATDLPLAHFRAWHGLPSEAAVEHTLVKFGPNRFEMAAPGFLELYRQQILSPFTIFQLFCS------------------------------------------GLWLLDNYWTYSVFTLFMIFTFEATVVFQRIKNLGTLK--------------------------------GMGNESHPVSVHRAGRWRPLTTDQLLPGDLFSLRRTKAN--DVVPCDCLLVRGSAVVNEASLTGESVPQMKEGLGPALRAGGGQEEALGMKASHHKVHVLYGGTKILTSNSQVSRKKRELAQVQADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVIDTSAPVEPPPDGGCLCYVLRTGFASSQGKLVRMIEGSTETVR-------------------------TDTRDTALLLLLLLAFAVCSSGYVLHEGMKSGNKR----SKYELLLHCVLIVTTVIPPELPMQMALAVNSSLMTLLRMQVFCTEPYRIPMAGKVDTCLFDKTGTLTTDELVAVGVAPAAGV 1857
            CF TIG+QY DAL RAEE G+ +P SID QRT L +++ G       A  G       VK   LPS+ LPGFWA+L LG+V I H L++LLQ WSV+ RC +         R                ATHVRVTP+ T G  K LLLP++ GPLGP+F ++RR YV+D R++ F+K+RC T LP +HFR W GLPS AAV H   KFGPNRFEMA P F  +YRQQ++SP TIFQLFC+                                          GLWLLD+YW YS F LFMI  FE TVV QR+K++ TLK                                GMG +S PV V+RAG W+  TTD+LLPGDLFSLRR  AN  D+VPCDCLL+RGS VVNEA+LTGES+PQMKEG    +R+     E L +KA HHKVH L+GGTK+LT+            +V  D                                  +T    E  PD GCL YVLRTGF+SSQGKLVRMIEGSTETVR                         TDTRDT+LLLLLLL FAV +S YVL EGMK         S+Y+LLLHC+LI+T+VIPPELPMQMALAVNSSL+TL++M VFCTEPYRIP    VD CLFDKTGTLTTDELVAVGVAP  G+
Sbjct:  106 CFETIGDQYRDALLRAEELGLVVPDSIDSQRTALASLVNGTASAVDAAATGSAAAAGAVKEVHLPSQWLPGFWAMLFLGVVVILHVLVILLQVWSVSFRCWVXXXXXXXXVRMSRISHARGGAQGLGGATHVRVTPQATHGGGKDLLLPLRTGPLGPFFEYHRRMYVYDARQNCFIKVRCETTLPASHFREWGGLPSAAAVAHARTKFGPNRFEMATPEFWAMYRQQLVSPLTIFQLFCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCMGLWLLDDYWRYSCFNLFMILVFEGTVVLQRLKSIQTLKXXXXXXXKRCRSGFDDQALAVLSLRLEALPSAGMGLDSLPVKVYRAGVWQETTTDELLPGDLFSLRRGAANGADLVPCDCLLLRGSCVVNEATLTGESIPQMKEGF---VRSAIPDGEKLDLKAGHHKVHALFGGTKLLTAEGHQEAHTGP-GEVDLDGEPD------------------------------ETLEEHEVTPDEGCLAYVLRTGFSSSQGKLVRMIEGSTETVRMDTMVRTDTMAKEDSCPTLRLMPVRTDTRDTSLLLLLLLVFAVSASAYVLREGMKXXXXXXXXMSRYQLLLHCMLIITSVIPPELPMQMALAVNSSLLTLMKMHVFCTEPYRIP----VDICLFDKTGTLTTDELVAVGVAPPQGM 767          
BLAST of mRNA_P-wetherbeei_contig1867.1.3 vs. uniprot
Match: A0A7S1TUB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUB7_9STRA)

HSP 1 Score: 537 bits (1384), Expect = 1.290e-180
Identity = 332/672 (49.40%), Postives = 425/672 (63.24%), Query Frame = 1
Query:   13 SGKRIKSLRLFREVNNDSFLPTRGFFSREHVPFLVLYAWALRWCFMTIGEQYHDALARAEEFGMELPGSI-----DRQRTTLNAM-----------LAGVDITAKDA-DIGVKIASLPSEHLPGFWALLALGLVAIAHALMMLLQHWSVNMRCLIRFRPVDAVERATHVRVTPRTTSGSSKTLLLPVKAGP---LGPWFVFNRRKYVHDPRKDAFVKIRCATDLPLAHFRAWHGLPSEAAVEHTLVKFGPNRFEMAAPGFLELYRQQILSPFTIFQLFCSGLWLLDNYWTYSVFTLFMIFTFEATVVFQRIKNLGTLKGMGNESHPVSVHRAGRWRPLTTDQLLPGDLFSLR--------------------------------------RTKANDVVPCDCLLVRGSAVVNEASLTGESVPQMKEGLGPALRAGGGQEEALGMKASHHKVHVLYGGTKILTSNSQV-SRKKRELAQVQADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVIDTSAPVEPPPDGGCLCYVLRTGFASSQGKLVRMIEGSTET--VRTDTRDTALLLLLLLAFAVCSSGYVLHEGMKSGNKRSKYELLLHCVLIVTTVIPPELPMQMALAVNSSLMTLLRMQVFCTEPYRIPMAGKVDTCLFDKTGTLTTDELVAVGVAP 1845
            +GKR++S+RL+R        P  G    EH+PFLVLY   L  C++TIG+Q+  A+ARAE  G+ LP +      D ++     +           L  VD   ++A D G +   LPS  LPGFWAL +LG+  + H L++LLQ WSV  +CL+R+  VD+V  ATHV VTP   +G  K  LLP++  P   LG WF + RR Y  D R+  FVKIRC  D P+ ++    GL SE ++     K+G N   +  P F ELY QQ+LSP  +FQ+F S LWLLD YW YS F++FMIF FE+TVVF R+K+LGTL+ MG+ +  VSV R  RW  +++D LLPGDL SL                                        T+A D+VPCD L++RGSAVVNE+SLTGES+PQMK  L   +      EE L +K +H K+HVL+GGT++L + S        E       XXXXXXXXXXXXXXXXXX            +A++ ++ P   PPDGG +CYVLRTGF+SS GKLVRMIEGS +T  VR + RDTALLLLLLL FAV SSGYVL++ +   +  S+Y+LLLHC+LIVT+VIPPELPMQMALAVN++LMTL++MQ+FCTEPYR+P+AG +DTCLFDKTGTLTTDELVAVGV P
Sbjct:    2 TGKRVESVRLYR----SRATPLLGRLGVEHLPFLVLYVLVLWQCYLTIGDQFERAVARAERDGIPLPMTATSLKADAEKVFTQGLESDNQKGWFERLTDVDAAFEEAEDDGPRPIRLPSRWLPGFWALFSLGVTIVLHLLLVLLQIWSVRFKCLVRYAEVDSVTAATHVHVTPAKVAGGGKPALLPLQKAPGTALGTWFTYARRNYAWDSRRRLFVKIRCKVDYPVGNYMGTSGLSSETSMRAARQKYGRNTCTLDMPTFGELYVQQLLSPLVVFQIFSSCLWLLDEYWQYSAFSIFMIFVFESTVVFSRLKSLGTLRNMGSGAKTVSVFRRQRWMRISSDDLLPGDLLSLSLKGGKAVGSAEEGNDGGEAAAKXXXXXXXXXXXXXXXXNTEA-DMVPCDALILRGSAVVNESSLTGESIPQMKAALRVDVGNAKEAEEPLNIKGTH-KIHVLFGGTRLLQTKSDAYDPTADEXXXXXXXXXXXXXXXXXXXXXXXXXQDTEGFEEDEDEVAMMLSNVPT--PPDGGAICYVLRTGFSSSHGKLVRMIEGSADTKSVRGNDRDTALLLLLLLCFAVTSSGYVLYKCL-GDDSWSQYQLLLHCILIVTSVIPPELPMQMALAVNTALMTLMKMQLFCTEPYRLPVAGHIDTCLFDKTGTLTTDELVAVGVVP 664          
BLAST of mRNA_P-wetherbeei_contig1867.1.3 vs. uniprot
Match: A0A7S2UGQ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGQ7_9STRA)

HSP 1 Score: 477 bits (1228), Expect = 6.620e-148
Identity = 300/711 (42.19%), Postives = 387/711 (54.43%), Query Frame = 1
Query:   19 KRIKSLRLFREVNNDSFLPTRGFFSREHVPFLVLYAWALRWCFMTIGEQYHDALARAEEFGMELPGSIDRQRTTLNAMLAGVDITAK-----------DADIGV------------------KIASLPSEHLPGFWALLALGLVAIAHALMMLLQHWSVNMRCLIRFRPVDA-------------------------------------VERA----------THVRVTPRTTSGSSKTLLLPVKAGP-LGPWFVFNRRKYVHDPRKDAFVKIRCATDLPLAHFRAWHGLPSEAAVEHTLVKFGPNRFEMAAPGFLELYRQQILSPFTIFQLFCSGLWLLDNYWTYSVFTLFMIFTFEATVVFQRIKNLGTLKGMGNESHPVSVHRAGRWRPLTTDQLLPGDLFSLRRTKAN---------------------DVVPCDCLLVRGSAVVNEASLTGESVPQMKEGLGPALRAGGGQEEALGMKASHHKVHVLYGGTKILTSNSQVSRKKRELAQVQADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVIDTSAPVEPPPDGGCLCYVLRTGFASSQGKLVRMIEGSTETVRTDTRDTALLLLLLLAFAVCSSGYVLHEGMKSGNKRSKYELLLHCVLIVTTVIPPELPMQMALAVNSSLMTLLRMQVFCTEPYRIPMAGKVDTCLFDKTGTLTTDELVAVGVAPAAGV 1857
            KRI+++ L+R        P R      H+ FLV Y + + W   TIGE Y   L +A+  G ++     + R  L+  L  ++   +           D DI                    K   +P ++ P F  +L LG++   +AL++LLQ WSV  +  + + PV A                                     + RA          TH RV+P     + K +L+P+   P LG  F ++RR+Y + P  + + KIRC T++P   F  W G  SE  +    ++FGPN F++A P F ELY++Q+LSPFT+FQLFC  LW+LD+YW YS FTLFMI  FE TVVF RIK+LG L+GMGN+S  V V+R GRW  + +  LLPGD+FSL R K +                     DVVP D LL+RGS VVNEASLTGESVPQMKEGL           E L MK + HK HVLY GTK+L     +     E +  +                                         + PPPD GCLC+VLRTGF+S+QGKLVRMIEGS E V+   R+T LLLLLL  FA+ SS YVL+ G++  N RS+YELLLHC+LI+T+VIPPELPMQMALAVN+SLMTL++MQVFCTEPYR+PMAGK+D CLFDKTGTLTTDELVAVGV    G+
Sbjct:   14 KRIEAVSLYRPKLAPG-APGRRI-KLYHLLFLVAYVYQIYWVASTIGEPYSKFLEKADREGFQVMEGTTKMRAQLHHALGDINDENRPKDKVGWFDWMDMDIEEHAERKKKEKEQTVLDSLPKSMRVPGKYAPAFTPMLILGVLVTLNALILLLQVWSVGFKVRLNYVPVSAKSVVIPDQVLELADDLEAEGISSDNSLKKKESPGEQIMRRASELQLPAQFPTHARVSP----AAGKDVLVPLLYLPTLGITFEYHRRRYAYSPETETWSKIRCRTNMPTDFFGTWKGFYSEDQLTACQIRFGPNVFDVAQPTFKELYKKQLLSPFTVFQLFCVILWMLDDYWQYSFFTLFMILMFEGTVVFSRIKSLGALRGMGNKSRSVLVYRMGRWTGIESSYLLPGDIFSLTRNKPHYAKDEDGKSKKGRGNLEDEDGDVVPADVLLLRGSTVVNEASLTGESVPQMKEGLSDFEEG-----EELSMK-NRHKNHVLYAGTKMLQCKGIMETIAEEESSEEESEVKETSDNSKQLYGS------------------------IPPPPDQGCLCFVLRTGFSSAQGKLVRMIEGSQEKVKGHERETGLLLLLLFCFAMASSSYVLYHGLRDEN-RSQYELLLHCILIITSVIPPELPMQMALAVNNSLMTLMKMQVFCTEPYRVPMAGKLDACLFDKTGTLTTDELVAVGVCELKGL 687          
BLAST of mRNA_P-wetherbeei_contig1867.1.3 vs. uniprot
Match: A0A7S2ELI2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ELI2_9STRA)

HSP 1 Score: 462 bits (1189), Expect = 5.530e-142
Identity = 293/601 (48.75%), Postives = 365/601 (60.73%), Query Frame = 1
Query:  310 LPSEHLPGFWALLALGLVAIAHALMMLLQHWSVNMRCLIRFRPVDA-----------------------------------------------VERA----------THVRVTPRTTSGSSKTLLLPVKAGP-LGPWFVFNRRKYVHDPRKDAFVKIRCATDLPLAHFRAWHGLPSEAAVEHTLVKFGPNRFEMAAPGFLELYRQQILSPFTIFQLFCSGLWLLDNYWTYSVFTLFMIFTFEATVVFQRIKNLGTLKGMGNESHPVSVHRAGRWRPLTTDQLLPGDLFSLRRTKAN------------------------------DVVPCDCLLVRGSAVVNEASLTGESVPQMKEGLGPALRAGGGQEEALGMKASHHKVHVLYGGTKILTSNSQVSRKKRELAQVQADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVIDTSAPVEPPPDGGCLCYVLRTGFASSQGKLVRMIEGSTETVRTDTRDTALLLLLLLAFAVCSSGYVLHEGMKSGNKRSKYELLLHCVLIVTTVIPPELPMQMALAVNSSLMTLLRMQVFCTEPYRIPMAGKVDTCLFDKTGTLTTDELVAVGVAPA 1848
            +P +H P F  +L  G++ + HAL++L+QHW+V     + +  V+A                                               V+R+          TH RVTP     + K +L+P+   P LG  F ++RR+Y +DP    +VKIRC T +P + F  W+GL S   +    ++FG N F++  P F+ELY+ Q+LSPFT+FQLFC  LW+LD+YW YS FTLFMI TFE TVVF RIK+L  L+GMGN+S    V R G WR + T  LLPGD+ SL R + +                              D+VP D LL+RGS VVNEASLTGESVPQMKEG+ P +     + EAL MK + HK HV+Y GTK+L        K  E+ + +   XXXXXXXXXXXXXXXXXXXXX        I           PPDGGCLC+VLRTGF+S QGKLVRMIEGS E V+   RDTALLLL L  FAV SS YVL+ G+K  N RS+YELLLHC++I+T+VIPPELPMQMALAVN+SLMTL++MQVFCTEPYR+P+AGK+D CLFDKTGTLTTDELVAVGV  A
Sbjct:  155 VPKKHAPAFTPMLVTGILVVLHALIVLMQHWNVRFNVWLNYTEVNAKNVDIPDEMMEIDEEHFLSMDGSAGTGEGSAGNANNKSSSLSLGEKIVQRSILYSPPSHLPTHARVTP----SAGKNVLVPLLYLPTLGMTFEYHRRRYTYDPESATWVKIRCQTTMPTSFFSTWNGLSSSDQITALQIRFGQNVFDVKQPTFVELYKAQLLSPFTVFQLFCVILWMLDDYWQYSAFTLFMILTFEGTVVFSRIKSLSALRGMGNKSRACLVFRCGAWRSVETTDLLPGDVMSLTRVRPHNKNKKSDDKENEVDDAKKIKKDAKKEDEEGDIVPADLLLLRGSTVVNEASLTGESVPQMKEGMPPDVLHE--EHEALSMK-NKHKNHVMYAGTKMLQC------KGVEVVEAEEASXXXXXXXXXXXXXXXXXXXXXEGEKLFRDIPN---------PPDGGCLCFVLRTGFSSGQGKLVRMIEGSQEKVKGHERDTALLLLFLFIFAVASSSYVLYHGLKDEN-RSQYELLLHCIMIITSVIPPELPMQMALAVNNSLMTLMKMQVFCTEPYRVPIAGKLDACLFDKTGTLTTDELVAVGVCEA 732          
BLAST of mRNA_P-wetherbeei_contig1867.1.3 vs. uniprot
Match: A0A448ZFF0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFF0_9STRA)

HSP 1 Score: 452 bits (1164), Expect = 5.590e-139
Identity = 285/700 (40.71%), Postives = 376/700 (53.71%), Query Frame = 1
Query:   46 REVNNDSFLPTRGFFSREH------VPFLVLYAWALRWCFMTIGEQYHDALARAEEFGMELPGSIDRQRTTLNAMLAGV-DITAKDADIGV----------------------------KIASLPSEHLPGFWALLALGLVAIAHALMMLLQHWSVNMRCLIRFRPVDA----------------------------------VERA---------THVRVTPRTTSGSSKTLLLPVKAGP-LGPWFVFNRRKYVHDPRKDAFVKIRCATDLPLAHFRAWHGLPSEAAVEHTLVKFGPNRFEMAAPGFLELYRQQILSPFTIFQLFCSGLWLLDNYWTYSVFTLFMIFTFEATVVFQRIKNLGTLKGMGNESHPVSVHRAGRWRPLTTDQLLPGDLFSLRRTKAN----------------------DVVPCDCLLVRGSAVVNEASLTGESVPQMKEGLGPALRAGGGQEEALGMKASHHKVHVLYGGTKILTSNSQVSRKKRELAQVQADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVIDTSAPVEP-PPDGGCLCYVLRTGFASSQGKLVRMIEGSTETVRTDTRDTALLLLLLLAFAVCSSGYVLHEGMKSGNKRSKYELLLHCVLIVTTVIPPELPMQMALAVNSSLMTLLRMQVFCTEPYRIPMAGKVDTCLFDKTGTLTTDELVAVGV 1839
            R V   ++ P     SR H      V FL LY + + W   TIGE Y   L +A+  G E+     + R  L    A + D   +   IG+                            K   +PS +   F   L LG++AI HAL++L+Q+WSV     I +R +DA                                  ++RA         TH R+ P       + +L+P++  P LG  F ++RR+YV+DP    + KIRC T         W G  SE  +    +++GPN F +  P F++LY+ Q+LSPFT+FQ+FC  LW+LD YW YS FTLFM+ TFEATVVF RIK+L  L+GMGN+  PV V+R   W  + T +LLPGD+ SL R K +                      D++P D LL+RGS VVNEASLTGESVPQMKEGL   +  G    E L MK   +K++V Y GTK+L             A++ +                               +    +  P  P PPD GC+C+VLRTGF+S QGKLVRMIEGS E V+   ++T LLLL    FA+ SSGYVL+ G++S +KRSK+ELLLHC++IVT+VIPPELPMQMALAVN+SLMTL+++ +FCTEPYR+P+AGK+D CLFDKTGTLTTDELVAVGV
Sbjct:   11 RIVRVATYQPKFSTGSRRHRIRLYNVVFLALYVYQIMWVTSTIGEPYRKFLEKADREGFEVMEGSTKLRAELEHAFADINDPNRRTKKIGMFDWMDMDIEELAAEKKKDKEKSVLDSLPKNMRVPSRYATEFTPTLILGIIAILHALVLLMQYWSVAFLVWINYREIDADASELPEEMMELDLEEDEIKLAAWKKKAKKSEVMMDRAITNIPSNLPTHARIVP----AKGRHVLVPLEYHPTLGMTFEYHRRRYVYDPDTSEWSKIRCGTTFGKEFLETWTGFDSEMHLVSGQIRYGPNAFSVKQPTFIDLYKAQLLSPFTVFQIFCVILWMLDEYWQYSFFTLFMVLTFEATVVFSRIKSLSALRGMGNQPRPVLVYRLNNWVSVETTELLPGDIMSLTRVKPHFATANDGKKKKIVSKKVEDEGGDLIPADLLLLRGSTVVNEASLTGESVPQMKEGLSE-MEDG----EHLNMKG-RNKMNVAYAGTKMLQCKGA--------AEIDSQ------------------------------VGETKSFTPSIPNPPDNGCVCFVLRTGFSSQQGKLVRMIEGSQEKVKGHEKETGLLLLXXXXFAITSSGYVLYHGLQS-DKRSKFELLLHCIMIVTSVIPPELPMQMALAVNNSLMTLMKLHIFCTEPYRVPIAGKLDACLFDKTGTLTTDELVAVGV 661          
BLAST of mRNA_P-wetherbeei_contig1867.1.3 vs. uniprot
Match: A0A3L6VVV8_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VVV8_9STRA)

HSP 1 Score: 421 bits (1082), Expect = 3.110e-136
Identity = 257/627 (40.99%), Postives = 349/627 (55.66%), Query Frame = 1
Query:   10 WSGKRIKSLRLFREVNNDSFLPTRGFFSREHVPFLVLYAWALRWCFMTIGEQYHDALARAEEFGMEL------PGSIDRQRTTLNAMLAGVDITAKDADIGVKIASLPSEHLPGFWALLALGLVAIAHALMMLLQHWSVNMRCLIRFRPVDAVERATHVRVTPRTTSGSSKTLLLPVKAGPLG------PWFVFNRRKYVHDPRKD----AFVKIRCATDLPLAHFRAWHGLPSEAAVEHTLVKFGPNRFEMAAPGFLELYRQQILSPFTIFQLFCSGLWLLDNYWTYSVFTLFMIFTFEATVVFQRIKNLGTLKGMGNESHPVSVHRAGRWRPLTTDQLLPGDLFSLRRTKAND-VVPCDCLLVRGSAVVNEASLTGESVPQMKEGLGPALRAGGGQEEALGMKASHHKVHVLYGGTKILTSNSQVSRKKRELAQVQADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVIDTSAPVEPPPDGGCLCYVLRTGFASSQGKLVRMIEGSTETVRTDTRDTALLLLLLLAFAVCSSGYVLHEGMKSGNKRSKYELLLHCVLIVTTVIPPELPMQMALAVNSSLMTLLRMQVFCTEPYRIPMAGKVDTCLFDKTGTLTTDELVAVGV 1839
            W+G+ I  L L R   N   L     +  EHVPFL+L+A+ L WC+ T G+ Y  AL   EE G ++      P   D      +                V+I  LP+  LPG   LL L  V   H LM L+Q WS  +   I++ PV  +  AT V+V PR   G  K++++P++   L       P+F+F + KYV +   D     F K++      +A +    G+ S+AA    L  +G N F +  P F+++Y++Q++ P T+FQ+F   L++LD YW YS+FTL MI  FE   VF R+KNL TL+GMGN    V V R G W    T  L+PGD+ SL+R    D  VPCDCLL++G+AV NEA+LTGESVPQMKE +G  + A      +L MK +HHKVH+L+GGT I+  +   +                                             +   A V P PD G L YVLRTGF++SQGKLVRMIE S+  V  ++ D   L  LL+ FA+ SSGYVL EG  +   R  +EL+L CVLI+T+V+P ELPMQ A+AVN++L+ L+R+ +FCTEP+RI +AGKVD CLFDKTGT+TTD+L AVGV
Sbjct:    6 WTGRSITQLSLHRRRTNIGNLE----YGLEHVPFLLLHAYNLFWCYQTSGQPYAIALEELEESGFDIQRILNPPTDEDLAGLAASXXXXXXXXXXXXXXXDVQIPPLPNPFLPGIAPLLCLLAVLCLHILMRLMQVWSTRVLTFIKYTPVATLSDATFVKVVPRAYRG--KSVIVPLEQHVLSTGEKSAPFFMFQKHKYVGEQSNDDGSICFRKLKAPVTATVATYVNATGVASDAAYNRMLDLYGRNEFSIPQPTFIKMYQEQLVEPLTVFQIFSVLLYMLDEYWQYSLFTLVMILMFEGVTVFSRLKNLQTLRGMGNALRTVFVFRHGAWIEACTSSLVPGDVVSLKRNLDGDNTVPCDCLLLQGNAVANEATLTGESVPQMKEAIGQKMSADD-LAASLDMK-THHKVHLLFGGTTIMQHDGHTN---------------------------------------------VTAHAVVPPTPDNGVLVYVLRTGFSASQGKLVRMIEYSSGKVTGNSWDAVGLAALLVFFALASSGYVLREGW-ARKGRVTFELILRCVLIITSVVPAELPMQTAMAVNTALLALVRLSIFCTEPFRISLAGKVDICLFDKTGTITTDQLTAVGV 578          
BLAST of mRNA_P-wetherbeei_contig1867.1.3 vs. uniprot
Match: A0A3R7DK58_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7DK58_9STRA)

HSP 1 Score: 427 bits (1097), Expect = 6.890e-136
Identity = 262/628 (41.72%), Postives = 358/628 (57.01%), Query Frame = 1
Query:   10 WSGKRIKSLRLFREVNNDSFLPTRGFFSREHVPFLVLYAWALRWCFMTIGEQYHDALARAEEFGMELPGSIDRQRTTLNAMLAGVDIT-------AKDADIGVKIASLPSEHLPGFWALLALGLVAIAHALMMLLQHWSVNMRCLIRFRPVDAVERATHVRVTPRTTSGSSKTLLLPVKAGPLG------PWFVFNRRKYVHDPRKD----AFVKIRCATDLPLAHFRAWHGLPSEAAVEHTLVKFGPNRFEMAAPGFLELYRQQILSPFTIFQLFCSGLWLLDNYWTYSVFTLFMIFTFEATVVFQRIKNLGTLKGMGNESHPVSVHRAGRWRPLTTDQLLPGDLFSLRRTKAND-VVPCDCLLVRGSAVVNEASLTGESVPQMKEGLGPALRAGGGQEEALGMKASHHKVHVLYGGTKILTSNSQVSRKKRELAQVQADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVIDTSAPVEPPPDGGCLCYVLRTGFASSQGKLVRMIEGSTETVRTDTRDTALLLLLLLAFAVCSSGYVLHEGMKSGNKRSKYELLLHCVLIVTTVIPPELPMQMALAVNSSLMTLLRMQVFCTEPYRIPMAGKVDTCLFDKTGTLTTDELVAVGV 1839
            W+G+ I  L L R   N   L     +  EHVPFL+L+A+ L WC+ T G+ Y  AL   EE G ++   ++     + A LA   ++       A  AD  V+I  LP+  LPG   LL L  V   H LM L+Q WS  +   I++ PV  +  AT V+V PR   G  K++++P++   L       P+F+F + KYV +  KD     F K++      +A +    G+ S+AA    L  +G N F +  P F+++Y++Q++ P T+FQ+F   L++LD YW YS+FTL MI  FE   VF R+KNL TL+GMGN    V V R G W    T  L+PGD+ SL+R    D  VPCDCLL++G+AV NEA+LTGESVPQMKE +G  + A      +L MK +HHKVH+L+GGT I+  +   +                                             +   A V P PD G L YVLRTGF++SQGKLVRMIE S+  V  ++ D   L  LL+ FA+ SSGYVL EG  +   R  +EL+L CVLI+T+V+P ELPMQ A+AVN++L+ L+R+ +FCTEP+RI +AGKVD CLFDKTGT+TTD+L AVGV
Sbjct:    6 WTGRSITQLSLHRRRTNIGNLE----YGLEHVPFLLLHAYNLFWCYQTSGQPYAIALEELEESGFDIQRILNPPTDEVLAGLAASALSSASAAGDATGAD-DVQIPPLPNPFLPGIAPLLCLLAVLCLHILMRLMQVWSTRVLTFIKYTPVATLSDATFVKVVPRAYRG--KSVIVPLEQHVLSTGEKSAPFFMFQKHKYVGEQSKDDGSICFRKLKAPVTATVATYVNATGVASDAAYNRMLDLYGRNEFSIPQPTFIKMYQEQLVEPLTVFQIFSVLLYMLDEYWQYSLFTLVMILMFEGVTVFSRLKNLQTLRGMGNALRTVYVFRHGAWIEACTSSLVPGDVVSLKRNLDGDNTVPCDCLLLQGNAVANEATLTGESVPQMKEAIGQKMSADD-LAASLDMK-THHKVHLLFGGTTIMQHDGHTN---------------------------------------------VTAHAVVPPTPDNGVLVYVLRTGFSASQGKLVRMIEYSSGKVTGNSWDAVGLAALLVFFALASSGYVLREGW-ARKGRVTFELILRCVLIITSVVPAELPMQTAMAVNTALLALVRLSIFCTEPFRISLAGKVDICLFDKTGTITTDQLTAVGV 578          
BLAST of mRNA_P-wetherbeei_contig1867.1.3 vs. uniprot
Match: A0A7S4HIT1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HIT1_9STRA)

HSP 1 Score: 444 bits (1143), Expect = 1.010e-135
Identity = 287/693 (41.41%), Postives = 368/693 (53.10%), Query Frame = 1
Query:  100 HVPFLVLYAWALRWCFMTIGEQYHDALARAEEFGMELPGSIDRQRTTLNAMLAGV----------------DITAKD-------------ADIGVKIASLPSEHLPGFWALLALGLVAIAHALMMLLQHWSVNMRCLIRFRPVDA------------------------------------VERA----------THVRVTPRTTSGSSKTLLLPVKAGP-LGPWFVFNRRKYVHDPRKDAFVKIRCATDLPLAHFRAWHGLPSEAAVEHTLVKFGPNRFEMAAPGFLELYRQQILSPFTIFQLFCSGLWLLDNYWTYSVFTLFMIFTFEATVVFQRIKNLGTLKGMGNESHPVSVHRAGRWRPLTTDQLLPGDLFSLRRTK---------------------ANDVVPCDCLLVRGSAVVNEASLTGESVPQMKEGLGPALRAGGGQEEALGMKASHHKVHVLYGGTKIL-------------TSNSQVSRKKRELAQVQADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVIDTSAPVEPPPDGGCLCYVLRTGFASSQGKLVRMIEGSTETVRTDTRDTALLLLLLLAFAVCSSGYVLHEGMKSGNKRSKYELLLHCVLIVTTVIPPELPMQMALAVNSSLMTLLRMQVFCTEPYRIPMAGKVDTCLFDKTGTLTTDELVAVGVAPA 1848
            H+ FL +Y +   W   TIGE Y   L +A+  G ++     + R  L   L+ +                ++  +D              D   K   +P  +   F   L  G++   H L++LLQ WSV     I ++ + A                                    VE+A          TH RVTP  T G    +L+P+   P LG  F ++RR+YV+D     + K+R   ++P A F +W G  S   V  + ++FG N F++  P F ELY+ Q+LSPFT+FQLFC  LW+LD+YW YS FTL MI  FE TVVF RIK +  L+GMGN+  PV V+R GRW+ + +  LLPGD+ SL R +                       D+V  D LL+RGS VVNEASLTGESVPQMKEGL   +       E L MK +H K HVLY GTKIL             +S+  VS    + ++V  D                                       +  P DGGCLC+VLRTGF+S QGKLVRMIEGS E V+   ++TALLLLLL  FAV SS YVL+ G+   N RS+YELLLHC+LI+T+VIPPELPMQMALAVN+SLMTL++MQVFCTEPYR+PMAGK+D+CLFDKTGTLTTDELVAVGV PA
Sbjct:   50 HLVFLAIYVFQAYWVASTIGEPYRKFLEKADREGFQVMEGSAKMRAELEFALSDINDPDRPKEKLGWFDWMEMDVEDHAERKKREKERTVLDSLPKSMRVPGRYAAAFTPCLISGILVTLHLLIVLLQVWSVGFNVWINYKEIAAKGVEVPDEMLDADTFLSDSELGDAANGGVKSIGQRIVEKAENAVVPSHLPTHARVTP--TKGHD--VLVPLLYLPTLGLSFEYHRRRYVYDAETGVWSKVRARVNMPTAFFPSWSGFTSPEQVTASHIRFGRNVFDVRQPTFKELYKAQLLSPFTVFQLFCVVLWMLDDYWQYSAFTLCMILMFEGTVVFSRIKCMSALRGMGNKPRPVLVYRMGRWQSILSFDLLPGDVMSLTRHRPPAAKGDKSDVADKKVKQEDEGGDIVSADVLLLRGSCVVNEASLTGESVPQMKEGLHEIVEG-----EDLSMKTTH-KGHVLYAGTKILQCKGIDVVEAEEASSDEDVSGDAAKESKVYGD---------------------------------------IPKPHDGGCLCFVLRTGFSSGQGKLVRMIEGSQEKVKGHEKETALLLLLLFIFAVISSSYVLYHGIHDEN-RSQYELLLHCILIITSVIPPELPMQMALAVNNSLMTLMKMQVFCTEPYRVPMAGKLDSCLFDKTGTLTTDELVAVGVFPA 692          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1867.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWH2_9PHAE3.900e-24166.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TW81_9STRA1.370e-19652.63p-atpase family transporter: cation n=2 Tax=Monodo... [more]
A0A836CGN5_9STRA3.720e-18249.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1TUB7_9STRA1.290e-18049.40Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2UGQ7_9STRA6.620e-14842.19Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2ELI2_9STRA5.530e-14248.75Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A448ZFF0_9STRA5.590e-13940.71Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A3L6VVV8_9STRA3.110e-13640.99Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A3R7DK58_9STRA6.890e-13641.72Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A7S4HIT1_9STRA1.010e-13541.41Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1867contigP-wetherbeei_contig1867:3..2443 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FQP9
PFAMsCation_ATPase_N,E1-E2_ATPase,Hydrolase
Model size2002
Max annot lvl2759|Eukaryota
KEGG koko:K14950
KEGG TC3.A.3.10
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001709,GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0007154,GO:0007275,GO:0008150,GO:0008324,GO:0009267,GO:0009555,GO:0009605,GO:0009846,GO:0009856,GO:0009888,GO:0009987,GO:0009991,GO:0010073,GO:0010152,GO:0012505,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016036,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0019829,GO:0021700,GO:0022414,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030154,GO:0031224,GO:0031226,GO:0031667,GO:0031668,GO:0031669,GO:0032501,GO:0032502,GO:0033554,GO:0034220,GO:0042592,GO:0042594,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044706,GO:0045165,GO:0046873,GO:0048229,GO:0048507,GO:0048856,GO:0048863,GO:0048865,GO:0048867,GO:0048869,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071496,GO:0071944,GO:0072503,GO:0072507,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0099131,GO:0099132
Exons3
Evalue1.3e-238
EggNOG OGsCOG0474@1|root,KOG0209@2759|Eukaryota
Ec32 ortholog descriptionP-type ATPase, A domain
Ec32 orthologEc-01_000070.1
Descriptioncalcium-transporting ATPase activity
Cds size2001
COG categoryP
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186151.96511-CDS-P-wetherbeei_contig1867:2..2721683186151.96511-CDS-P-wetherbeei_contig1867:2..272Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1867 3..272 -
1683186151.9786885-CDS-P-wetherbeei_contig1867:503..9711683186151.9786885-CDS-P-wetherbeei_contig1867:503..971Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1867 504..971 -
1683186151.98644-CDS-P-wetherbeei_contig1867:1180..24431683186151.98644-CDS-P-wetherbeei_contig1867:1180..2443Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1867 1181..2443 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1867.1.3prot_P-wetherbeei_contig1867.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1867 3..2443 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1867.1.3

>prot_P-wetherbeei_contig1867.1.3 ID=prot_P-wetherbeei_contig1867.1.3|Name=mRNA_P-wetherbeei_contig1867.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=667bp
MVGWSGKRIKSLRLFREVNNDSFLPTRGFFSREHVPFLVLYAWALRWCFM
TIGEQYHDALARAEEFGMELPGSIDRQRTTLNAMLAGVDITAKDADIGVK
IASLPSEHLPGFWALLALGLVAIAHALMMLLQHWSVNMRCLIRFRPVDAV
ERATHVRVTPRTTSGSSKTLLLPVKAGPLGPWFVFNRRKYVHDPRKDAFV
KIRCATDLPLAHFRAWHGLPSEAAVEHTLVKFGPNRFEMAAPGFLELYRQ
QILSPFTIFQLFCSGLWLLDNYWTYSVFTLFMIFTFEATVVFQRIKNLGT
LKGMGNESHPVSVHRAGRWRPLTTDQLLPGDLFSLRRTKANDVVPCDCLL
VRGSAVVNEASLTGESVPQMKEGLGPALRAGGGQEEALGMKASHHKVHVL
YGGTKILTSNSQVSRKKRELAQVQADDEEEDGGAAPKGNANGHGDDGSSD
EEEVEEIAVIDTSAPVEPPPDGGCLCYVLRTGFASSQGKLVRMIEGSTET
VRTDTRDTALLLLLLLAFAVCSSGYVLHEGMKSGNKRSKYELLLHCVLIV
TTVIPPELPMQMALAVNSSLMTLLRMQVFCTEPYRIPMAGKVDTCLFDKT
GTLTTDELVAVGVAPAAGVAVSPAAGRSGRSSPRSSAAAGGDGAAAAGNS
TAGGGANGGAYGGAAGG
back to top

mRNA from alignment at P-wetherbeei_contig1867:3..2443-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1867.1.3 ID=mRNA_P-wetherbeei_contig1867.1.3|Name=mRNA_P-wetherbeei_contig1867.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2441bp|location=Sequence derived from alignment at P-wetherbeei_contig1867:3..2443- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGGCTGGAGCGGGAAGCGAATCAAGTCGCTTCGTCTCTTCCGTGA GGTCAACAATGACAGTTTTCTCCCGACGCGCGGCTTTTTCAGCCGCGAGC ACGTCCCCTTTCTCGTGCTCTACGCGTGGGCCTTGCGATGGTGCTTCATG ACCATCGGCGAGCAGTATCACGACGCCCTCGCCCGCGCCGAGGAGTTCGG TATGGAGCTGCCGGGCTCCATCGATCGGCAACGCACGACGCTCAACGCCA TGCTCGCAGGCGTCGATATCACGGCGAAAGACGCGGACATCGGCGTCAAG ATCGCCAGCCTGCCGTCTGAGCACCTCCCGGGCTTCTGGGCGCTGCTGGC GCTCGGCCTCGTGGCCATCGCGCACGCCCTCATGATGCTGCTGCAGCACT GGTCGGTCAACATGCGCTGCCTCATCCGCTTCCGCCCCGTCGACGCAGTC GAGCGGGCGACTCACGTCCGCGTTACACCCCGTACGACGTCCGGCAGCAG CAAGACGCTGCTGCTGCCCGTCAAGGCCGGCCCGCTCGGCCCGTGGTTCG TGTTCAACCGCCGGAAGTACGTACACGACCCGCGGAAGGATGCCTTCGTC AAGATTCGCTGCGCGACCGACCTGCCGTTGGCGCACTTCCGAGCGTGGCA CGGACTGCCCAGCGAGGCGGCCGTGGAGCACACGCTGGTGAAGTTCGGGC CGAACCGGTTCGAGATGGCGGCGCCGGGCTTTTTGGAGCTGTACCGGCAG CAGATCCTGAGCCCCTTCACCATCTTCCAGCTGTTCTGCAGCGGACTCTG GCTGCTGGACAACTACTGGACCTACTCCGTCTTCACGCTCTTCATGATTT TCACCTTTGAGGCCACCGTCGTCTTTCAACGCATCAAGAACCTCGGCACC CTTAAGGGCATGGGCAACGAGTCCCACCCGGTCTCTGTCCACCGCGCCGG CCGCTGGCGGCCGCTGACGACCGACCAGCTTCTTCCTGGAGACCTCTTCA GCCTGCGGCGCACCAAAGCAAACGACGTCGTGCCCTGCGACTGCCTGCTG GTACGCGGCAGCGCTGTCGTCAACGAGGCGAGCCTGACCGGAGAGTCAGT TCCGCAGATGAAGGAGGGGCTGGGGCCGGCGCTCCGGGCTGGAGGCGGGC AGGAGGAGGCGCTGGGGATGAAGGCGAGCCATCACAAGGTCCACGTACTG TACGGCGGCACCAAGATTCTCACCTCGAACAGCCAGGTGAGCAGGAAGAA GAGAGAGCTGGCGGTGAACCGAAGTCCGTTCTGCTGTTAGCTGAAACCGT GTTGCGTAGTCTTCTCCCATCTTTACGCGGCTGTCGTTTCTGCTTCATCT CGCGCAAGATATGCGTGGTTTGAGTTGGGTCGTGTTTACTTCTTGTGGCC AGCTAACATTAAGGAAGTTCCTCACAAAAGCCAGGGTGTCCGCTGTCAAA TTGCGTTCACAATATCCCAAAGCAGGTCCAGGCTGACGACGAGGAGGAAG ACGGCGGCGCCGCCCCCAAGGGGAATGCCAACGGCCACGGCGATGACGGC AGCAGCGACGAAGAAGAGGTGGAGGAGATTGCGGTGATCGACACCTCCGC CCCCGTGGAACCGCCGCCGGACGGGGGCTGCCTCTGCTACGTCCTGCGCA CGGGCTTCGCTTCGTCGCAAGGTAAGCTTGTCCGCATGATCGAGGGGTCG ACCGAGACGGTGCGCACCGACACGCGCGACACGGCGCTGCTGCTGCTGCT GCTGCTGGCCTTCGCCGTGTGCTCGTCGGGCTACGTGCTGCACGAGGGCA TGAAGAGCGGCAACAAGCGCAGCAAGTACGAGTTGCTGCTGCACTGCGTG CTAATCGTGACGACGGTCATCCCGCCGGAGCTGCCCATGCAGATGGCGCT CGCCGTCAACAGCTCTCTGATGACGCTCCTGCGGATGCAAGTGAGCAGTG AAGGAGGCATACGGTTTTTCTTTTTTATTCCTCTGCTTTGATCGTTAGTT GTGGAGCTCCCCATCTTGGCTCGGATTTTCTTGTTTTATATCTTTATTTG AACTTTCAAAGCTCGGTACTTACATATCACTTGCTTGGCAATCGATTGGC GACATTTTTTGGTCTTTTTCTGCCAATCTTGATAACGGAATATCTCCGCA TCCCTTCCATTCCGGAGCCAGGTGTTTTGCACAGAGCCGTATCGGATCCC GATGGCCGGGAAGGTGGACACGTGCCTGTTCGACAAGACGGGCACCCTCA CCACGGACGAGCTTGTGGCGGTCGGCGTCGCGCCCGCAGCTGGCGTCGCC GTGTCGCCAGCTGCAGGAAGAAGCGGGAGAAGCAGCCCGCGCAGCTCCGC AGCTGCCGGCGGTGACGGAGCCGCGGCGGCGGGAAACAGCACTGCGGGCG GTGGCGCCAACGGCGGCGCTTACGGCGGGGCGGCAGGGGGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1867:3..2443-

>mRNA_P-wetherbeei_contig1867.1.3 ID=mRNA_P-wetherbeei_contig1867.1.3|Name=mRNA_P-wetherbeei_contig1867.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2001bp|location=Sequence derived from alignment at P-wetherbeei_contig1867:3..2443- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGGCTGGAGCGGGAAGCGAATCAAGTCGCTTCGTCTCTTCCGTGA
GGTCAACAATGACAGTTTTCTCCCGACGCGCGGCTTTTTCAGCCGCGAGC
ACGTCCCCTTTCTCGTGCTCTACGCGTGGGCCTTGCGATGGTGCTTCATG
ACCATCGGCGAGCAGTATCACGACGCCCTCGCCCGCGCCGAGGAGTTCGG
TATGGAGCTGCCGGGCTCCATCGATCGGCAACGCACGACGCTCAACGCCA
TGCTCGCAGGCGTCGATATCACGGCGAAAGACGCGGACATCGGCGTCAAG
ATCGCCAGCCTGCCGTCTGAGCACCTCCCGGGCTTCTGGGCGCTGCTGGC
GCTCGGCCTCGTGGCCATCGCGCACGCCCTCATGATGCTGCTGCAGCACT
GGTCGGTCAACATGCGCTGCCTCATCCGCTTCCGCCCCGTCGACGCAGTC
GAGCGGGCGACTCACGTCCGCGTTACACCCCGTACGACGTCCGGCAGCAG
CAAGACGCTGCTGCTGCCCGTCAAGGCCGGCCCGCTCGGCCCGTGGTTCG
TGTTCAACCGCCGGAAGTACGTACACGACCCGCGGAAGGATGCCTTCGTC
AAGATTCGCTGCGCGACCGACCTGCCGTTGGCGCACTTCCGAGCGTGGCA
CGGACTGCCCAGCGAGGCGGCCGTGGAGCACACGCTGGTGAAGTTCGGGC
CGAACCGGTTCGAGATGGCGGCGCCGGGCTTTTTGGAGCTGTACCGGCAG
CAGATCCTGAGCCCCTTCACCATCTTCCAGCTGTTCTGCAGCGGACTCTG
GCTGCTGGACAACTACTGGACCTACTCCGTCTTCACGCTCTTCATGATTT
TCACCTTTGAGGCCACCGTCGTCTTTCAACGCATCAAGAACCTCGGCACC
CTTAAGGGCATGGGCAACGAGTCCCACCCGGTCTCTGTCCACCGCGCCGG
CCGCTGGCGGCCGCTGACGACCGACCAGCTTCTTCCTGGAGACCTCTTCA
GCCTGCGGCGCACCAAAGCAAACGACGTCGTGCCCTGCGACTGCCTGCTG
GTACGCGGCAGCGCTGTCGTCAACGAGGCGAGCCTGACCGGAGAGTCAGT
TCCGCAGATGAAGGAGGGGCTGGGGCCGGCGCTCCGGGCTGGAGGCGGGC
AGGAGGAGGCGCTGGGGATGAAGGCGAGCCATCACAAGGTCCACGTACTG
TACGGCGGCACCAAGATTCTCACCTCGAACAGCCAGGTGAGCAGGAAGAA
GAGAGAGCTGGCGCAGGTCCAGGCTGACGACGAGGAGGAAGACGGCGGCG
CCGCCCCCAAGGGGAATGCCAACGGCCACGGCGATGACGGCAGCAGCGAC
GAAGAAGAGGTGGAGGAGATTGCGGTGATCGACACCTCCGCCCCCGTGGA
ACCGCCGCCGGACGGGGGCTGCCTCTGCTACGTCCTGCGCACGGGCTTCG
CTTCGTCGCAAGGTAAGCTTGTCCGCATGATCGAGGGGTCGACCGAGACG
GTGCGCACCGACACGCGCGACACGGCGCTGCTGCTGCTGCTGCTGCTGGC
CTTCGCCGTGTGCTCGTCGGGCTACGTGCTGCACGAGGGCATGAAGAGCG
GCAACAAGCGCAGCAAGTACGAGTTGCTGCTGCACTGCGTGCTAATCGTG
ACGACGGTCATCCCGCCGGAGCTGCCCATGCAGATGGCGCTCGCCGTCAA
CAGCTCTCTGATGACGCTCCTGCGGATGCAAGTGTTTTGCACAGAGCCGT
ATCGGATCCCGATGGCCGGGAAGGTGGACACGTGCCTGTTCGACAAGACG
GGCACCCTCACCACGGACGAGCTTGTGGCGGTCGGCGTCGCGCCCGCAGC
TGGCGTCGCCGTGTCGCCAGCTGCAGGAAGAAGCGGGAGAAGCAGCCCGC
GCAGCTCCGCAGCTGCCGGCGGTGACGGAGCCGCGGCGGCGGGAAACAGC
ACTGCGGGCGGTGGCGCCAACGGCGGCGCTTACGGCGGGGCGGCAGGGGG
G
back to top