mRNA_P-wetherbeei_contig18663.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18663.2.1
Unique NamemRNA_P-wetherbeei_contig18663.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18663.2.1 vs. uniprot
Match: D7FP14_ECTSI (Mitochondrial phosphate carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP14_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 1.100e-27
Identity = 120/285 (42.11%), Postives = 152/285 (53.33%), Query Frame = 1
Query:    1 LGELVVAAACADVVGSCALAPLEAARIRMVTLPGYASGLWQSLAKMAREETSGAXXXXXXAALFRGLPAVLARQLPYTVTQLVSFELLSRGAAALLQRSDVAGYAASGMTATAGKSALRFTLTLACALAAGVLSSLASQPGDALMSRVNAGGH---------------------DHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAP--------------ENLLSLLKHILCEEGVGGLFCGTSVRLLHVTAIVVVQLVVFDLVKVRIG 750
            LG L+ A+  A++VGS AL PLEAARIRMV    YA GL   +A+M  EE          AAL RGLPAVLA+Q+PYTVT+LV+F+ L R  A+L+ R+   G      T   G        T+ACA+ AGVLSSLASQPGD+L+S +N+ G                      D              XXXXXXXXXXXXXXXXXXXX         + AP              E ++  +  I  E G  GLF GT  R++HVT+IV VQL+++  +K  +G
Sbjct:  403 LGTLIAASVTAEIVGSSALTPLEAARIRMVADADYAPGLRSGIARMVSEE--------GVAALTRGLPAVLAKQIPYTVTKLVTFDYLVRTVASLVSRNSSGGGKKGFGTGVGG--------TVACAVIAGVLSSLASQPGDSLLSALNSEGRNAEVEGGGMNTVAGFDEVMMSDVNSEDGSGSMSDSGXXXXXXXXXXXXXXXXXXXXADAPVYFEGSDAPTGQLEQQXXXXXXVEPVILAMARIAREAGFSGLFRGTGARMMHVTSIVTVQLLIYQSIKNMVG 671          
BLAST of mRNA_P-wetherbeei_contig18663.2.1 vs. uniprot
Match: A0A7S0DR98_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DR98_9EUKA)

HSP 1 Score: 90.9 bits (224), Expect = 2.830e-17
Identity = 63/138 (45.65%), Postives = 84/138 (60.87%), Query Frame = 1
Query:   40 VGSCALAPLEAARIRMVTLPGYASGLWQSLAKMAREETSGAXXXXXXAALFRGLPAVLARQLPYTVTQLVSFELLSRGAAALLQRSDVAGYAASGMTATAGKSALRFTLTLACALAAGVLSSLASQPGDALMSRVNAG 453
            + S AL PLEAARIR+V  P +A GL+ ++ KM RE  +          LF GLPA +A+Q+PYTVT+ VSF+ L+         +   G AA+   ATAG    ++ +TL+ AL A VLS+L SQPGD L+S VN G
Sbjct:  313 IASVALCPLEAARIRLVADPKFAKGLFDAIPKMMRERGA-------VQVLFAGLPAQMAKQVPYTVTKQVSFDFLT---------AKAYGLAAAIGIATAG-GFNKWAITLSSALIAAVLSTLTSQPGDMLLSAVNKG 433          
BLAST of mRNA_P-wetherbeei_contig18663.2.1 vs. uniprot
Match: A0A7S0MCQ0_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MCQ0_9CRYP)

HSP 1 Score: 89.0 bits (219), Expect = 7.520e-17
Identity = 62/155 (40.00%), Postives = 86/155 (55.48%), Query Frame = 1
Query:    1 LGELVVAAACADVVGSCALAPLEAARIRMVTLPGYASGLWQSLAKMAREETSGAXXXXXXAALFRGLPAVLARQLPYTVTQLVSFELLSRGAAALLQRSDVAGYAASGMTATAG---KSALRFTLTLACALAAGVLSSLASQPGDALMSRVNAGG 456
            L   + A A A+++ S AL PLEA RIR+V  P Y   ++ +L ++ RE   G         +F GLPA+  +Q+PYT+ QL  F+ L+  A              +G+ A+ G     A RFT TL  ALAA V+SSLASQPGDA++S  + GG
Sbjct:  192 LAAFLAAGAAAELIASSALCPLEATRIRLVADPAYGREVFDALPRLVRETGLG---------IFSGLPAIYCKQVPYTMAQLAVFDSLTAQA--------------NGVLASLGLLDDPAARFTATLCSALAASVVSSLASQPGDAVLSECSRGG 323          
BLAST of mRNA_P-wetherbeei_contig18663.2.1 vs. uniprot
Match: W7T0P6_9STRA (Mitochondrial phosphate carrier protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0P6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.340e-15
Identity = 56/145 (38.62%), Postives = 85/145 (58.62%), Query Frame = 1
Query:   13 VVAAACADVVGSCALAPLEAARIRMVTLPGYASGLWQSLAKMAREETSGAXXXXXXAALFRGLPAVLARQLPYTVTQLVSFELLSRGAAALLQRSDVAGYAASGMTATAGKSALRFTLTLACALAAGVLSSLASQPGDALMSRVN 447
            V+A+  AD + S AL PLEA RIR+V  P +ASG    +  + REE          +++F+G+PA+LA+QLPYT+ QL  FEL++R    +    +V     + +    G    ++ ++   AL  GV +S+ASQPGD ++SRVN
Sbjct:  324 VLASMIADCIASTALCPLEATRIRLVADPSFASGTLDGIGHLLREE--------GCSSIFKGMPAILAKQLPYTIVQLCGFELITR----VFYSWEVT----ARLVHAPGP--WQWLVSFGSALITGVFASIASQPGDVILSRVN 450          
BLAST of mRNA_P-wetherbeei_contig18663.2.1 vs. uniprot
Match: A0A4D9CPA0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPA0_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.640e-15
Identity = 56/145 (38.62%), Postives = 85/145 (58.62%), Query Frame = 1
Query:   13 VVAAACADVVGSCALAPLEAARIRMVTLPGYASGLWQSLAKMAREETSGAXXXXXXAALFRGLPAVLARQLPYTVTQLVSFELLSRGAAALLQRSDVAGYAASGMTATAGKSALRFTLTLACALAAGVLSSLASQPGDALMSRVN 447
            V+A+  AD + S AL PLEA RIR+V  P +ASG    +  + REE          +++F+G+PA+LA+QLPYT+ QL  FEL++R    +    +V     + +    G    ++ ++   AL  GV +S+ASQPGD ++SRVN
Sbjct:  366 VLASMIADCIASTALCPLEATRIRLVADPSFASGTLDGIGHLLREE--------GCSSIFKGMPAILAKQLPYTIVQLCGFELITR----VFYSWEVT----ARLVHAPGP--WQWLVSFGSALITGVFASIASQPGDVILSRVN 492          
BLAST of mRNA_P-wetherbeei_contig18663.2.1 vs. uniprot
Match: A0A7S4DME5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DME5_9EUKA)

HSP 1 Score: 83.6 bits (205), Expect = 7.740e-15
Identity = 59/141 (41.84%), Postives = 83/141 (58.87%), Query Frame = 1
Query:   31 ADVVGSCALAPLEAARIRMVTLPGYASGLWQSLAKMAREETSGAXXXXXXAALFRGLPAVLARQLPYTVTQLVSFELLSRGAAALLQRSDVAGYAASGMTATAGKSALRFTLTLACALAAGVLSSLASQPGDALMSRVNAG 453
            A  + S AL P+EAARIR+V+ P YA G+  +L +M   + +          LF+GLPA LA+Q+PYT+T+ V+F+ ++       Q   VA      MT  A     +F++TL  AL A +LS+LASQPGD L+S VN G
Sbjct:  243 AGAIASLALCPIEAARIRLVSDPNYAPGMGGALKRMMGVQGT-------LGVLFQGLPAQLAKQVPYTMTKQVTFDFVTA------QAYLVAATIGMDMTNQA-----KFSITLGGALIAALLSTLASQPGDTLLSAVNKG 365          
BLAST of mRNA_P-wetherbeei_contig18663.2.1 vs. uniprot
Match: A1C9J7_ASPCL (Mitochondrial thiamine pyrophosphate carrier 1 n=23 Tax=Aspergillus TaxID=5052 RepID=A1C9J7_ASPCL)

HSP 1 Score: 80.9 bits (198), Expect = 3.180e-14
Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 1
Query:   16 VAAACADVVGSCALAPLEAARIRMVTLPGYASGLWQSLAKMAREETSGAXXXXXXAALFRGLPAVLARQLPYTVTQLVSFELLSRGAAALLQRSDVAGYAASGMTATAGKSALRFTLTLACALAAGVLSSLASQPGDALMSRVN 447
            V+AACA+   S AL PLEA RIR+V+ PG+A+GL+    K+ + E  G        A +RG   +L +Q+PYTVT+ V +E ++    A L +S ++  A +G+   +G             L AG  +++ SQP D ++S++N
Sbjct:  126 VSAACAEFFASIALCPLEATRIRLVSQPGFANGLFSGFGKIFKNEGIG--------AFYRGFGPILLKQVPYTVTKFVVYEKVAEAVFARLDKSKLSNGAQTGVNLGSG-------------LIAGFAAAIISQPADTMLSKIN 248          
BLAST of mRNA_P-wetherbeei_contig18663.2.1 vs. uniprot
Match: A0A179IPB7_CORDF (Uncharacterized protein n=1 Tax=Cordyceps confragosa TaxID=2714763 RepID=A0A179IPB7_CORDF)

HSP 1 Score: 78.2 bits (191), Expect = 5.550e-13
Identity = 49/142 (34.51%), Postives = 80/142 (56.34%), Query Frame = 1
Query:   22 AACADVVGSCALAPLEAARIRMVTLPGYASGLWQSLAKMAREETSGAXXXXXXAALFRGLPAVLARQLPYTVTQLVSFELLSRGAAALLQRSDVAGYAASGMTATAGKSALRFTLTLACALAAGVLSSLASQPGDALMSRVN 447
            AA A+ +G  AL P E+ RIR+V+ PGYA+GL  +LAKMA+EE            L+ GL  +L +Q+PYT+   + +E   + A A++ +  ++   A+G+   AG             L AG+ +++ SQP D ++S++N
Sbjct:  230 AAAAEFLGDIALCPFESVRIRLVSQPGYANGLVDALAKMAKEE--------GLRGLYSGLGPILLKQIPYTMATFLVYEKAVQTAHAVVDKESLSSAGATGINLGAG-------------LVAGLAAAVVSQPADTILSKIN 350          
BLAST of mRNA_P-wetherbeei_contig18663.2.1 vs. uniprot
Match: A4S5Y7_OSTLU (MC family transporter: phosphate n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S5Y7_OSTLU)

HSP 1 Score: 77.0 bits (188), Expect = 8.200e-13
Identity = 79/243 (32.51%), Postives = 103/243 (42.39%), Query Frame = 1
Query:   10 LVVAAACADVVGSCALAPLEAARIRMVTLPGYASGLWQSLAKMAREETSGAXXXXXXAALFRGLPAVLARQLPYTVTQLVSFELLSRGAAALLQRSDVAGYAASGMTATAGKSALRFTLTLACALAAGVLSSLASQPGDALMSRVNAGGHDHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPENLLSLLKHILCEEGVGGLFCGTSVRLLHVTAIVVVQLVVFDLVK 738
            LV  AA A+VVGS  L PLE  RI+ V+   YA   + + A+    E +G       +++   LP V A+ LPYT  QLVS+++ +R  A++   S                     T   A ALAAGVL+SLASQPGD L+S  NAG                                              +P P    S L  +  E G  GL  G   R+ HVT IV  QL+V+D VK
Sbjct:  134 LVACAASAEVVGSAVLTPLEQIRIKTVSDSRYAGDSFAAAARRFASEPNGGL-----SSVASNLPVVYAKMLPYTAVQLVSYDVFNRTLASMSLDSA--------------------TTRPAAALAAGVLASLASQPGDTLLSATNAG---------------------------------RCVIVGDDEDTTASPRPRR--SPLD-VAIELGPVGLMTGWRARIAHVTLIVFAQLLVYDAVK 315          
BLAST of mRNA_P-wetherbeei_contig18663.2.1 vs. uniprot
Match: A0A7R9ZHT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZHT6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.910e-12
Identity = 53/139 (38.13%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   37 VVGSCALAPLEAARIRMVTLPGYASGLW-QSLAKMAREETSGAXXXXXXAALFRGLPAVLARQLPYTVTQLVSFELLSRGAAALLQRSDVAGYAASGMTATAGKSALRFTLTLACALAAGVLSSLASQPGDALMSRVNA 450
            V  S  L P+EA RIR+V  P +A G W +   KM + E  G         L++G+ A++++Q+PYTVT+ VSF+  +  A   ++        +SG   TA    ++FT+ L  A+ A VLS ++SQPGD L+S VNA
Sbjct:    2 VAASAMLCPMEALRIRLVAEPDFAPGGWVEGGMKMLKYEGVG--------GLWKGMSAMMSKQVPYTVTKNVSFDFFTTMAYNAVK--------SSGQILTAN---MKFTIPLVSAMIASVLSCISSQPGDMLLSAVNA 121          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18663.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP14_ECTSI1.100e-2742.11Mitochondrial phosphate carrier protein n=2 Tax=Ec... [more]
A0A7S0DR98_9EUKA2.830e-1745.65Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S0MCQ0_9CRYP7.520e-1740.00Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
W7T0P6_9STRA5.340e-1538.62Mitochondrial phosphate carrier protein n=2 Tax=Na... [more]
A0A4D9CPA0_9STRA5.640e-1538.62Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4DME5_9EUKA7.740e-1541.84Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A1C9J7_ASPCL3.180e-1435.42Mitochondrial thiamine pyrophosphate carrier 1 n=2... [more]
A0A179IPB7_CORDF5.550e-1334.51Uncharacterized protein n=1 Tax=Cordyceps confrago... [more]
A4S5Y7_OSTLU8.200e-1332.51MC family transporter: phosphate n=1 Tax=Ostreococ... [more]
A0A7R9ZHT6_9STRA2.910e-1238.13Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18663contigP-wetherbeei_contig18663:559..1308 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FP14
PFAMsMito_carr
Model size750
Max annot lvl2759|Eukaryota
KEGG koko:K08994,ko:K15102
KEGG TC1.A.46.2,2.A.29.4
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.8e-28
EggNOG OGsKOG0767@1|root,KOG0767@2759|Eukaryota
Ec32 ortholog descriptionmitochondrial phosphate carrier protein
Ec32 orthologEc-05_001790.1
Descriptionphosphate ion transmembrane transport
Cds size750
COG categoryU
BRITEko00000,ko02000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186151.8510048-CDS-P-wetherbeei_contig18663:558..13081683186151.8510048-CDS-P-wetherbeei_contig18663:558..1308Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18663 559..1308 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18663.2.1prot_P-wetherbeei_contig18663.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18663 559..1308 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18663.2.1

>prot_P-wetherbeei_contig18663.2.1 ID=prot_P-wetherbeei_contig18663.2.1|Name=mRNA_P-wetherbeei_contig18663.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=250bp
LGELVVAAACADVVGSCALAPLEAARIRMVTLPGYASGLWQSLAKMAREE
TSGAAGGGGAAALFRGLPAVLARQLPYTVTQLVSFELLSRGAAALLQRSD
VAGYAASGMTATAGKSALRFTLTLACALAAGVLSSLASQPGDALMSRVNA
GGHDHRRGGGCCSVGGSAARTASVPCAAAAGGTPVAAEAAVAAATAAAPA
PENLLSLLKHILCEEGVGGLFCGTSVRLLHVTAIVVVQLVVFDLVKVRIG
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mRNA from alignment at P-wetherbeei_contig18663:559..1308-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18663.2.1 ID=mRNA_P-wetherbeei_contig18663.2.1|Name=mRNA_P-wetherbeei_contig18663.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=750bp|location=Sequence derived from alignment at P-wetherbeei_contig18663:559..1308- (Phaeothamnion wetherbeei SAG_119_79)
CTGGGCGAGCTCGTCGTCGCCGCCGCCTGCGCCGACGTCGTGGGATCGTG CGCGCTGGCACCGCTGGAGGCTGCCCGAATCCGGATGGTGACGCTGCCCG GCTACGCATCTGGACTGTGGCAGAGCCTCGCCAAGATGGCGCGGGAGGAG ACGTCGGGGGCTGCCGGTGGCGGCGGCGCGGCGGCGCTGTTTCGTGGCCT GCCGGCGGTGCTCGCACGTCAGCTCCCTTACACGGTGACGCAGCTCGTGT CGTTCGAGCTGTTAAGTCGTGGCGCCGCGGCACTGCTGCAGCGGTCTGAC GTGGCGGGGTACGCGGCTTCGGGAATGACAGCGACGGCAGGGAAATCGGC GCTGCGCTTCACGCTTACCCTGGCCTGCGCGCTCGCCGCAGGAGTGCTCT CATCGCTGGCGTCCCAGCCGGGCGACGCCCTCATGTCGCGCGTCAACGCC GGTGGCCACGACCACCGTCGCGGCGGCGGCTGTTGCAGCGTGGGAGGCAG CGCGGCGCGGACGGCATCTGTTCCGTGCGCAGCGGCCGCAGGAGGAACGC CGGTGGCGGCGGAAGCGGCGGTGGCGGCGGCAACGGCGGCGGCGCCGGCA CCGGAGAATTTGCTGAGCCTGTTGAAACACATCCTCTGCGAGGAAGGTGT TGGCGGGCTCTTCTGTGGCACGTCAGTGCGGCTGCTGCACGTGACGGCCA TCGTGGTGGTGCAGCTCGTCGTCTTCGATTTGGTCAAGGTGCGTATCGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18663:559..1308-

>mRNA_P-wetherbeei_contig18663.2.1 ID=mRNA_P-wetherbeei_contig18663.2.1|Name=mRNA_P-wetherbeei_contig18663.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=750bp|location=Sequence derived from alignment at P-wetherbeei_contig18663:559..1308- (Phaeothamnion wetherbeei SAG_119_79)
CTGGGCGAGCTCGTCGTCGCCGCCGCCTGCGCCGACGTCGTGGGATCGTG
CGCGCTGGCACCGCTGGAGGCTGCCCGAATCCGGATGGTGACGCTGCCCG
GCTACGCATCTGGACTGTGGCAGAGCCTCGCCAAGATGGCGCGGGAGGAG
ACGTCGGGGGCTGCCGGTGGCGGCGGCGCGGCGGCGCTGTTTCGTGGCCT
GCCGGCGGTGCTCGCACGTCAGCTCCCTTACACGGTGACGCAGCTCGTGT
CGTTCGAGCTGTTAAGTCGTGGCGCCGCGGCACTGCTGCAGCGGTCTGAC
GTGGCGGGGTACGCGGCTTCGGGAATGACAGCGACGGCAGGGAAATCGGC
GCTGCGCTTCACGCTTACCCTGGCCTGCGCGCTCGCCGCAGGAGTGCTCT
CATCGCTGGCGTCCCAGCCGGGCGACGCCCTCATGTCGCGCGTCAACGCC
GGTGGCCACGACCACCGTCGCGGCGGCGGCTGTTGCAGCGTGGGAGGCAG
CGCGGCGCGGACGGCATCTGTTCCGTGCGCAGCGGCCGCAGGAGGAACGC
CGGTGGCGGCGGAAGCGGCGGTGGCGGCGGCAACGGCGGCGGCGCCGGCA
CCGGAGAATTTGCTGAGCCTGTTGAAACACATCCTCTGCGAGGAAGGTGT
TGGCGGGCTCTTCTGTGGCACGTCAGTGCGGCTGCTGCACGTGACGGCCA
TCGTGGTGGTGCAGCTCGTCGTCTTCGATTTGGTCAAGGTGCGTATCGGG
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