mRNA_P-wetherbeei_contig18650.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18650.1.1
Unique NamemRNA_P-wetherbeei_contig18650.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18650.1.1 vs. uniprot
Match: A0A1H1E8Z4_9GAMM (Nucleoside-diphosphate-sugar epimerase n=1 Tax=Pseudoxanthomonas sp. CF385 TaxID=1881042 RepID=A0A1H1E8Z4_9GAMM)

HSP 1 Score: 484 bits (1245), Expect = 3.390e-168
Identity = 242/381 (63.52%), Postives = 294/381 (77.17%), Query Frame = 1
Query:    1 RILVTGATGFIGSRLCEMLSLDHQLPYRALVRNFARAARIARLGPEMVAGDLSDAASLVRAVEGCDVVINLAHGDDKDARRQAKHLVAACRR-GVKRVVHVSSMAVHGPQPGLPVMTEANAPRGPWREAYSDAKAEAEDIVLSGGRRHGFPVVVVRPTVVYGPFSFFVTPIVDEAHAGRLSLIDSGRGICNAVYVDDVCDAIMVAVENDAVSGQSFLVNGDDRLSWREFHETFATMVERPHTVFDHASDAIEAHWANLEPRFATSVSALVRLAASPAFHAQLATVPPLGAFIRGLKELVAGAISAEQKLAIKRRVQGRRAVEA--SAPAVRIPSRGRVVREAYRTWIDNSHAKTVLGWQPQHRFADGAARTADWLRFARMI 1134
            +ILVTGA+GFIGSRLCE+LSL+++LPYRA+VR+F+RAARIARL  E+VAGD+ DAASL RAVEGCD V+NLAHGDD+ A++Q   L+ AC R GV+R+VH+SSMAVHGP P L V+TEA AP   W EAYSDAKA AE +V++ G+R     VV+RPT+VYGP+SFFVTPIV +A  G++SLID GRG+CNAVYVDDVC+AIM A+E D   G+ FL+NGD RL+W EF  TFA MVE   TV DHA D I A+W + +P    SV A +RLAASPAFHAQL T+P LG  IRG KE+VA  I+ EQKL IK R++GR A       P+VR+PS GRVVREAYR W+ N HAK  LGW+P H F  GA RTA+W+RFAR+I
Sbjct:    5 KILVTGASGFIGSRLCELLSLEYRLPYRAMVRDFSRAARIARLDAELVAGDMLDAASLARAVEGCDAVVNLAHGDDESAQKQTTQLIEACTRAGVRRIVHISSMAVHGPSPKLDVLTEATAPIERWNEAYSDAKAAAEAVVVAAGKRGALETVVIRPTIVYGPYSFFVTPIVHDARGGKISLIDGGRGLCNAVYVDDVCEAIMAAIERDDAVGEVFLINGDGRLTWGEFITTFAGMVEGEKTVHDHALDDIAAYWKSKQPNARDSVKAAIRLAASPAFHAQLGTIPSLGQLIRGAKEMVARRITPEQKLKIKSRLRGRGAPAPIDDVPSVRMPSEGRVVREAYRAWVANDHAKARLGWKPAHSFELGAQRTAEWMRFARLI 385          
BLAST of mRNA_P-wetherbeei_contig18650.1.1 vs. uniprot
Match: A0A2S6B8R2_9GAMM (Epimerase domain-containing protein n=1 Tax=Pseudoxanthomonas sp. KAs_5_3 TaxID=2067658 RepID=A0A2S6B8R2_9GAMM)

HSP 1 Score: 477 bits (1228), Expect = 1.300e-165
Identity = 244/381 (64.04%), Postives = 288/381 (75.59%), Query Frame = 1
Query:    1 RILVTGATGFIGSRLCEMLSLDHQLPYRALVRNFARAARIARLGPEMVAGDLSDAASLVRAVEGCDVVINLAHGDDKDARRQAKHLVAACRR-GVKRVVHVSSMAVHGPQPGLPVMTEANAPRGPWREAYSDAKAEAEDIVLSGGRRHGFPVVVVRPTVVYGPFSFFVTPIVDEAHAGRLSLIDSGRGICNAVYVDDVCDAIMVAVENDAVSGQSFLVNGDDRLSWREFHETFATMVERPHTVFDHASDAIEAHWANLEPRFATSVSALVRLAASPAFHAQLATVPPLGAFIRGLKELVAGAISAEQKLAIKRRVQGRR--AVEASAPAVRIPSRGRVVREAYRTWIDNSHAKTVLGWQPQHRFADGAARTADWLRFARMI 1134
            RILVTGATGFIGSRLCE+LSL +++PYRA+VR+F+RAARIARL  ++VAGD+ DAASL RAVEGCD V+NLAHGDD+ A +Q + LV AC R GV+R VHVSSMAVHGP P   V+TEA AP   W E YSDAKA +E +V + G+R     V++RPT+VYGPFSFFVTP+V +A AG++SLID GRGICNAVYVDDVCDAIM ++E D   G +FL+NGD R SW +F  TFA MVE   TV DH+ D I A+W    PR   SV A VRLA SPAFHAQL T+P LG  IRG KE+VA  I+ EQK+ IK R+QGRR  A    AP+VR+PS GRVVREAYR+W+ N  AK  LGW P H F  GA RTADW+RFARMI
Sbjct:    5 RILVTGATGFIGSRLCELLSLQYRVPYRAMVRDFSRAARIARLDVDLVAGDMMDAASLARAVEGCDAVVNLAHGDDESAEKQVRQLVDACTRAGVRRFVHVSSMAVHGPSPKPEVLTEATAPIERWGEVYSDAKAASEAVVAAAGKRGALETVILRPTIVYGPFSFFVTPVVQDARAGKISLIDGGRGICNAVYVDDVCDAIMASLERDDAVGGAFLINGDGRTSWGDFITTFAGMVEGAKTVHDHSLDEISAYWKARRPRARDSVKAAVRLAVSPAFHAQLGTIPSLGQLIRGTKEMVARRITPEQKIMIKSRLQGRRPAAHVGDAPSVRMPSEGRVVREAYRSWVSNELAKERLGWAPAHSFELGAQRTADWMRFARMI 385          
BLAST of mRNA_P-wetherbeei_contig18650.1.1 vs. uniprot
Match: A0A543E595_9GAMM (Nucleoside-diphosphate-sugar epimerase n=2 Tax=unclassified Pseudoxanthomonas TaxID=2645906 RepID=A0A543E595_9GAMM)

HSP 1 Score: 474 bits (1221), Expect = 1.500e-164
Identity = 243/381 (63.78%), Postives = 291/381 (76.38%), Query Frame = 1
Query:    1 RILVTGATGFIGSRLCEMLSLDHQLPYRALVRNFARAARIARLGPEMVAGDLSDAASLVRAVEGCDVVINLAHGDDKDARRQAKHLVAACRR-GVKRVVHVSSMAVHGPQPGLPVMTEANAPRGPWREAYSDAKAEAEDIVLSGGRRHGFPVVVVRPTVVYGPFSFFVTPIVDEAHAGRLSLIDSGRGICNAVYVDDVCDAIMVAVENDAVSGQSFLVNGDDRLSWREFHETFATMVERPHTVFDHASDAIEAHWANLEPRFATSVSALVRLAASPAFHAQLATVPPLGAFIRGLKELVAGAISAEQKLAIKRRVQGRR-AVEASA-PAVRIPSRGRVVREAYRTWIDNSHAKTVLGWQPQHRFADGAARTADWLRFARMI 1134
            +ILVTGATGFIGSRLCE+LSL+++LPYRALVR+F+RA RIARL  E+VAGD+ DA SL RAVEGCD V+NLAHGDD+ AR Q   L+ AC R GV+R VHVSSMAVHGP P L V+TEA AP   W EAYSDAKA +E +V++ G+R     VV+RPT+VYGP+SFFVTPIV +A AGR+SLID GRGICNAVYVDDVC+AIM A+E D   G +FL+NGD R++W +F  TFA MVE   TV DHA + I A+W + +P    S+ A +RLAASPAFHAQL T+P LG  IRG KELVA  IS EQKL IK R+Q R  A+ A   P VR+PS GRVVREAYR+W+ N  A+T LGW P H FA GA RT +W+RFAR++
Sbjct:    5 KILVTGATGFIGSRLCELLSLEYRLPYRALVRDFSRAVRIARLDTELVAGDMLDADSLARAVEGCDAVVNLAHGDDESARTQVTQLIEACTRAGVRRFVHVSSMAVHGPSPKLDVLTEATAPIQRWNEAYSDAKAASEAVVVAAGKRGALETVVLRPTIVYGPYSFFVTPIVQDARAGRISLIDGGRGICNAVYVDDVCEAIMAALERDDAVGAAFLINGDTRMTWGDFITTFAGMVEGEKTVHDHALEDIAAYWKSKQPNARDSIKAAIRLAASPAFHAQLGTIPSLGQLIRGTKELVARRISPEQKLKIKSRLQNRGPAIHADDHPPVRMPSEGRVVREAYRSWVSNDLARTRLGWVPAHSFALGARRTGEWMRFARIV 385          
BLAST of mRNA_P-wetherbeei_contig18650.1.1 vs. uniprot
Match: UPI0010507F8B (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Luteimonas terricola TaxID=645597 RepID=UPI0010507F8B)

HSP 1 Score: 474 bits (1220), Expect = 2.130e-164
Identity = 237/381 (62.20%), Postives = 288/381 (75.59%), Query Frame = 1
Query:    1 RILVTGATGFIGSRLCEMLSLDHQLPYRALVRNFARAARIARLGPEMVAGDLSDAASLVRAVEGCDVVINLAHGDDKDARRQAKHLVAACRR-GVKRVVHVSSMAVHGPQPGLPVMTEANAPRGPWREAYSDAKAEAEDIVLSGGRRHGFPVVVVRPTVVYGPFSFFVTPIVDEAHAGRLSLIDSGRGICNAVYVDDVCDAIMVAVENDAVSGQSFLVNGDDRLSWREFHETFATMVERPHTVFDHASDAIEAHWANLEPRFATSVSALVRLAASPAFHAQLATVPPLGAFIRGLKELVAGAISAEQKLAIKRRVQGRRAVEAS--APAVRIPSRGRVVREAYRTWIDNSHAKTVLGWQPQHRFADGAARTADWLRFARMI 1134
            RILVTGATGFIGSRLCE+LSL+++LPYRALVR+F+RA RIARL  E+VAGD+ D  SL RAV+GCD VINLAHGDD+  R+Q  HLV AC R GV+R+VHVSSMAVHGP P LPV+TE+ A    W EAYSDAKA  E +V + G+R     VV+RPT+VYGP+SFFVTPI+  A  GR+S+ID GRG+CNAVYVDDVC+AIM A++ D   G + L+NGD R++WR+F  TFA MVE P T  DH+ D I A+W    PR   SV+A +RLAASPAFH QL T+PP+G  IRG KELVAG IS EQK+ IK R+QGRRA   +    AV +P+ GRVVREAYR+W+ N  AK  LGW+P H F  GA RT +W+RFAR++
Sbjct:    5 RILVTGATGFIGSRLCELLSLEYRLPYRALVRDFSRAVRIARLDTELVAGDMLDPGSLARAVKGCDAVINLAHGDDQSTRKQTAHLVNACTRAGVRRLVHVSSMAVHGPSPELPVLTESTASIKRWGEAYSDAKAAGEAVVTAAGKRGALETVVLRPTIVYGPYSFFVTPIIQGAREGRISMIDGGRGVCNAVYVDDVCEAIMAALDGDDAVGAALLINGDTRITWRDFITTFAGMVEGPKTTHDHSPDDIAAYWQGRRPRARDSVTAALRLAASPAFHTQLGTIPPVGRLIRGTKELVAGRISPEQKMIIKSRLQGRRATAHADDTAAVEVPNPGRVVREAYRSWVSNDLAKARLGWKPAHPFELGARRTGEWMRFARIV 385          
BLAST of mRNA_P-wetherbeei_contig18650.1.1 vs. uniprot
Match: A0A2E9D0P4_9GAMM (Epimerase domain-containing protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2E9D0P4_9GAMM)

HSP 1 Score: 362 bits (928), Expect = 4.860e-120
Identity = 192/380 (50.53%), Postives = 254/380 (66.84%), Query Frame = 1
Query:    1 RILVTGATGFIGSRLCEMLSLDHQLPYRALVRNFARAARIARLGPEMVAGDLSDAASLVRAVEGCDVVINLAHGDDKDARRQAKHLVAAC-RRGVKRVVHVSSMAVHGPQPGLPVMTEANAPRGPWREAYSDAKAEAEDIVLSGGRRHGFPVVVVRPTVVYGPFSFFVTPIVDEAHAGRLSLIDSGRGICNAVYVDDVCDAIMVAVENDAVSGQSFLVNGDDRLSWREFHETFATMVERPHTVFDHASDAIEAHWANLEPRFATSVSALVRLAASPAFHAQLATVPPLGAFIRGLKELVAGAISAEQKLAIKRRVQGRRA-VEASAPAVRIPSRGRVVREAYRTWIDNSHAKTVLGWQPQHRFADGAARTADWLRFARMI 1134
            +ILVTGATGFIGSRLCE LSL H LPYRALVRNF+RA+RIAR+  EMV+G+L D  +L RA+E CDVV++LAH +D+ A+++ + L+  C + G++R VHVSSMAV+GP+PG    +E  A    + EAYSD+KA  E +V++  R   FP V+VRPTVVYGP+S FV P++D AH G ++LID G+G+CNAVYVDDVCDAI+ A+  D V G +F++NGD  +SWREF+   A+M  +P  V + AS  I  +W +  PRF  +   L  L AS  FHA+L+ VP   +F+   K  +   +S +QKL IK ++    A    SA +V  P  GR+VRE Y   I N  AK  LGW P + F DG   T  WL+F RMI
Sbjct:    5 KILVTGATGFIGSRLCERLSLVHNLPYRALVRNFSRASRIARVDAEMVSGELLDKPALERALEECDVVMHLAHSEDRLAKKETRALIDVCIQAGIQRFVHVSSMAVYGPEPGPECSSEETAVISHYGEAYSDSKAGQEAVVMAAVRSRNFPAVIVRPTVVYGPYSGFVPPVIDAAHRGHITLIDDGKGVCNAVYVDDVCDAIVAAMLADNVIGGAFVINGDTPVSWREFNLQLASMAGKPFDVSNLASADIREYWHSQAPRFTDNFRQLAGLLASNDFHAELSRVPLFESFLGWAKNSLGERLSDQQKLRIKLKLGYSNAPAPRSATSVEWPDPGRLVRECYPIVISNQKAKNALGWAPAYSFEDGVQLTGQWLKFVRMI 384          
BLAST of mRNA_P-wetherbeei_contig18650.1.1 vs. uniprot
Match: A0A2A2RWU5_9BACT (Epimerase domain-containing protein n=2 Tax=Verrucomicrobia subdivision 3 TaxID=134621 RepID=A0A2A2RWU5_9BACT)

HSP 1 Score: 300 bits (768), Expect = 6.390e-96
Identity = 166/380 (43.68%), Postives = 227/380 (59.74%), Query Frame = 1
Query:    1 RILVTGATGFIGSRLCEMLSLDHQLPYRALVRNFARAARIARLGPEMVAGDLSDAASLVRAVEGCDVVINLAHGDDKDARRQAKHLVAACRRG-VKRVVHVSSMAVHGPQPGLPVMTEANAPRGPWREA-YSDAKAEAEDIVLSGGRRHGFPVVVVRPTVVYGPFSFFVTPIVDEAHAGRLSLIDSGRGICNAVYVDDVCDAIMVAVENDAVSGQSFLVNGDDRLSWREFHETFATMVERPHTVFDHASDAIEAHWANLEPRFATSVSALVRLAASPAFHAQLATVPPLGAFIRGLKELVAGAISAEQKLAIKRRVQGRRAVEASAPAVRIPSRGRVVREAYRTWIDNSHAKTVLGWQPQHRFADGAARTADWLRFARMI 1134
            +IL+TGATGFIG+RLCE L L  +LPYRALVRN+  A RIARL  EM+ GDL+   ++V+A+EGCD +++LAHG+D  A ++  +++AA  R  VKR VH+SSM+VHG  PG     EA AP     E+ Y  +KA+ E +V     R G P +++RPTVVYGP+  FV   V +A  G + L+D G+ +CNAV VDDVC AI  A+  D   GQ+F VN D  ++WRE++ TF  M+ R     +  S  + A WA  +P   T+V+A  +L  SP  H Q   +P + + I   KE V   +  E+ LA K R+  R     + P V +P+  R+  EA+     N   K  LGW+P + F  GA  T  WL FARMI
Sbjct:    5 KILLTGATGFIGTRLCERLKLHWRLPYRALVRNYTHATRIARLDSEMIPGDLTKVDTIVKALEGCDALVHLAHGEDNKAPKETANVIAAALRAKVKRFVHISSMSVHGSNPGPESSREATAPIVRSDESTYVVSKAKEELLVRQAIERDGLPAIILRPTVVYGPYGGFVIAAVQQAKGGVIGLLDEGKWVCNAVMVDDVCSAIHAALTTDKGVGQAFFVNSDQPVTWREWNLTFGEMLGRKLETVNFDSAELRAFWAKQKPTLKTNVTAAAKLVVSPDLHRQFGKIPAVKSAIVWAKETVKARMGEEKVLAFKARMSPRPRAS-TGPGVPMPNPSRIRLEAFPIAFSNELLKQTLGWKPGYDFKAGAEVTRQWLEFARMI 383          
BLAST of mRNA_P-wetherbeei_contig18650.1.1 vs. uniprot
Match: A0A2G8TLW1_9BURK (Epimerase domain-containing protein n=2 Tax=Massilia eurypsychrophila TaxID=1485217 RepID=A0A2G8TLW1_9BURK)

HSP 1 Score: 228 bits (581), Expect = 2.080e-68
Identity = 142/378 (37.57%), Postives = 190/378 (50.26%), Query Frame = 1
Query:    1 RILVTGATGFIGSRLCEMLSLDHQLPYRALVRNFARAARIARLGPEMVAGDLSDAASLVRAVEGCDVVINLAHGDDKDARRQAKHLVAACRRGVKRVVHVSSMAVHGPQPGLPVMTEANAPRGPWREAYSDAKAEAEDIVLSGGRRHGFPVVVVRPTVVYGPFSFFVTPIVDEAHAGRLSLIDSGRGICNAVYVDDVCDAIMVAVENDAVSGQSFLVNGDDRLSWREFHETFATMVERPHTVFDHASDAIEAHWANLEPRFATSVSALVRLAASPAFHAQLATVPPLGAFIRGLKELVAGAISAEQKLAIKRRVQGRRAVEASAPAVRIPSRGRVVREAYRTWIDNSHAKTVLGWQPQHRFADGAARTADWLRFARMI 1134
            R L+TGA+GFIG+RLCE+L      PY  LVR+   A  +    P +   DL + A L RA++GCD +I+LAH D +      + +  A  RG+ R VHVS+M+VHGP PG     E  A  G +   YSD+KAE E+IV S   R    VV++RPTVVYGP S FV  ++++A  G +++ D G G+CNAVYVDDVCDAI  A+     +GQ+  +NGD  ++W EF   FA MVE    V + +S    ++WA                 A P  HA+      LG     LK+L                           P    P+ GRV RE +     N  AK VL W P+  F  G + T  WL  A  +
Sbjct:   10 RCLITGASGFIGTRLCELLDQQGVQPYTPLVRSPIAATALRARWPHLAVADLLNTADLKRAMQGCDSIIHLAHSD-RGPEATRRLVDCAIERGIARFVHVSTMSVHGPAPGPEAAREDTARIGRYDHDYSDSKAEQEEIVQSAHDRGDLQVVILRPTVVYGPNSHFVLQVIEQARDGTVTVFDHGTGLCNAVYVDDVCDAIDAALVRAEATGQAMFINGDQTVTWGEFINAFAAMVEPAPQVTNLSSADALSYWA-----------------AHPPVHARSL----LGRIGIKLKKLGGW----------------------QPPVAPWPNAGRVQREIFPVAFHNEKAKRVLDWAPKFDFPHGVSATRSWLGAAGYL 343          
BLAST of mRNA_P-wetherbeei_contig18650.1.1 vs. uniprot
Match: UPI00130358B3 (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Pelomonas puraquae TaxID=431059 RepID=UPI00130358B3)

HSP 1 Score: 226 bits (575), Expect = 1.790e-67
Identity = 144/374 (38.50%), Postives = 189/374 (50.53%), Query Frame = 1
Query:    1 RILVTGATGFIGSRLCEMLSLDHQL-PYRALVRNFARAARIARLGPEMVAGDLSDAASLVRAVEGCDVVINLAHGDDKDARRQAKHLV-AACRRGVKRVVHVSSMAVHGPQPGLPVMTEANAPRGPWREAYSDAKAEAEDIVLSGGRRHGFPVVVVRPTVVYGPFSFFVTPIVDEAHAGRLSLIDSGRGICNAVYVDDVCDAIMVAVENDAVSGQSFLVNGDDRLSWREFHETFATMVERPHTVFDHASDAIEAHWANLEPRFATSVSALVRLAASPAFHAQLATVPPLGAFIRGLKELVAGAISAEQKLAIKRRVQGRRAVEASAPAVRIPSRGRVVREAYRTWIDNSHAKTVLGWQPQHRFADGAARTADWL 1116
            R L+TGATG+IG RL E L+      P+ ALVR+ A A  +   G   V GDL D  SL  AV+GC+ VI+LAHGD     +  +HLV AA R GVKR VHVS+M+VHGP PG     EA A  G + E YSD+KAE E+IV S   R   PVV++RPTVVYG    F   ++ +A +G ++L D GRG+CNAV+VDDVCDAI  A  +    G++  +  D  ++W EF  TFA +   P    + ++D  + +WA   P     V   V                      R LK L                           P    P  GRV+RE +     N  A+ +L W P+  F +G AR+  WL
Sbjct:   10 RCLITGATGYIGGRLRERLAEQGLAEPHVALVRSPAAADAVKAGGGAAVVGDLLDPRSLDAAVQGCEQVIHLAHGDR--GPQATRHLVEAAARHGVKRFVHVSTMSVHGPAPGPEAAHEATARIGRYGEPYSDSKAEQEEIVQSAHARGDLPVVILRPTVVYGLGGHFERQVLAQARSGEVTLFDGGRGVCNAVFVDDVCDAIQAAQRSADALGEAMFITADQAITWGEFIRTFAALASPPPRFVERSADEAKRYWAEHPPEPMGGVPTRVW---------------------RKLKRLAGW----------------------QPPVAPWPPLGRVMRETFPIAFSNQKARRLLDWAPRVDFEEGVARSRVWL 338          
BLAST of mRNA_P-wetherbeei_contig18650.1.1 vs. uniprot
Match: A0A0Q7SF36_9BURK (Epimerase domain-containing protein n=1 Tax=Pelomonas sp. Root1444 TaxID=1736464 RepID=A0A0Q7SF36_9BURK)

HSP 1 Score: 225 bits (574), Expect = 2.380e-67
Identity = 142/376 (37.77%), Postives = 194/376 (51.60%), Query Frame = 1
Query:    1 RILVTGATGFIGSRLCEMLSLDHQLPYRALVRNFARAARIARLGPEMVAGDLSDAASLVRAVEGCDVVINLAHGDDKDARRQAKHLV-AACRRGVKRVVHVSSMAVHGPQPGLPVMTEANAPRGPWREAYSDAKAEAEDIVLSGGRRHGFPVVVVRPTVVYGPFSFFVTPIVDEAHAGRLSLIDSGRGICNAVYVDDVCDAIMVAVENDAVSGQSFLVNGDDRLSWREFHETFATMVERPHTVFDHASDAIEAHWANLEPRFATSVSALVRLAASPAFHAQLATVPPLGAFIRGLKELVAGAISAEQKLAIKRRVQGRRAVEASAPAVRIPSRGRVVREAYRTWIDNSHAKTVLGWQPQHRFADGAARTADWLRFA 1125
            R L+TGATGFIGSRL E      Q  + ALVR+ A AA++   G +    DL   A++ + ++GCD VI+LAHGD     +  ++LV AA  +GV+R VH+S+M+VHGP PG+    E  A  G +   YSD+KAE E+IV +   R     V++RPTVVYG    F   ++ +A AG +++ D G G+CN VYVDDVCDAI  A+ +    GQ+  +N D  +SW EF   FA MVE P  +   +S   + +WA   P                          PLG   + L           +KL   +R+ G R      P    P  GRV+RE +     N  AK +LGW P+  F  G   T +WLR A
Sbjct:   10 RCLITGATGFIGSRLRERFEAQGQQGHVALVRSAAAAAQLLAQGRQAAVADLLQPAAVAQGLQGCDAVIHLAHGDR--GPQATRNLVQAAVAQGVRRFVHISTMSVHGPAPGIEAAREETARIGRYGNEYSDSKAEQEEIVQAAIDRGDLRAVILRPTVVYGLGGHFELQVIQQARAGEVTMFDDGAGVCNVVYVDDVCDAIDAALVSQDALGQAMFINADRAVSWGEFIRRFAAMVEPPPRLKSLSSAEAKRYWAEHPPE-------------------------PLGGLHKRLL----------RKL---KRLGGWR-----PPVAPWPPEGRVLRETFPITFSNDKAKRLLGWAPRVDFEQGVMLTHEWLRAA 340          
BLAST of mRNA_P-wetherbeei_contig18650.1.1 vs. uniprot
Match: A0A2W5DGQ5_9BURK (Epimerase domain-containing protein n=1 Tax=Roseateles depolymerans TaxID=76731 RepID=A0A2W5DGQ5_9BURK)

HSP 1 Score: 220 bits (560), Expect = 7.400e-65
Identity = 145/374 (38.77%), Postives = 189/374 (50.53%), Query Frame = 1
Query:    1 RILVTGATGFIGSRLCEMLSLDHQLPYRALVRNFARAARIARLGPEMVAGDLSDAASLVRAVEGCDVVINLAHGDDKDARRQAKHLVAACRRGVKRVVHVSSMAVHGPQPGLPVMTEANAPRGPWREAYSDAKAEAEDIVLSGGRRHGFPVVVVRPTVVYGPFSFFVTPIVDEAHAGRLSLIDSGRGICNAVYVDDVCDAIMVAVENDAVSGQSFLVNGDDRLSWREFHETFATMVE-RPHTVFDHASDAIEAHWANLEPRFATSVSALVRLAASPAFHAQLATVPPLGAFIRGLKELVAGAISAEQKLAIKRRVQGRRAVEASAPAVRIPSRGRVVREAYRTWIDNSHAKTVLGWQPQHRFADGAARTADWLR 1119
            R L+TGA+GFIG+RLCE L  D Q  Y A+VR+   AA +A  G   V  DL        A+ GCD VI+LAHGD +      + + AA  + VKR VH+S+M+VHGP PG  V  E  A  G +   YSD+KAE E+IV +   R   PVV++RPTVVYG    F   ++ +A AG ++L D GRG CN V+VDDVCDAI  A+      G++  VNGD+ +SW EF   FA +V+  P  V   A+DA+  +WA   P                         P  G   R L++L                   RR      P    P  GRV RE +     N  AK +LGW P+  FA G A +  WL+
Sbjct:   47 RCLMTGASGFIGARLCERL--DGQQAYLAMVRSPEAAAALAASGRAAVVADLLKPGQAAHALRGCDAVIHLAHGD-RGPEATRRLVDAAVAQRVKRFVHISTMSVHGPVPGPEVAREETARIGRYGHDYSDSKAEQEEIVQAASARGDLPVVILRPTVVYGLGGHFEAQVLAQARAGEVTLFDGGRGECNPVFVDDVCDAIDAALWRPEALGEAMFVNGDEAVSWGEFIHAFAALVQPAPRFVDLSAADALR-YWAAHPPE------------------------PVGGLSTRVLRKL-------------------RRLAGWQPPVAPWPPLGRVWRETFPVRFTNDKAKRLLGWAPRVDFAQGVALSRAWLQ 373          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18650.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H1E8Z4_9GAMM3.390e-16863.52Nucleoside-diphosphate-sugar epimerase n=1 Tax=Pse... [more]
A0A2S6B8R2_9GAMM1.300e-16564.04Epimerase domain-containing protein n=1 Tax=Pseudo... [more]
A0A543E595_9GAMM1.500e-16463.78Nucleoside-diphosphate-sugar epimerase n=2 Tax=unc... [more]
UPI0010507F8B2.130e-16462.20NAD-dependent epimerase/dehydratase family protein... [more]
A0A2E9D0P4_9GAMM4.860e-12050.53Epimerase domain-containing protein n=1 Tax=Chroma... [more]
A0A2A2RWU5_9BACT6.390e-9643.68Epimerase domain-containing protein n=2 Tax=Verruc... [more]
A0A2G8TLW1_9BURK2.080e-6837.57Epimerase domain-containing protein n=2 Tax=Massil... [more]
UPI00130358B31.790e-6738.50NAD-dependent epimerase/dehydratase family protein... [more]
A0A0Q7SF36_9BURK2.380e-6737.77Epimerase domain-containing protein n=1 Tax=Pelomo... [more]
A0A2W5DGQ5_9BURK7.400e-6538.77Epimerase domain-containing protein n=1 Tax=Roseat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18650contigP-wetherbeei_contig18650:68..1204 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog195250.CM001776_gene941
PFAMsEpimerase
Model size1137
Max annot lvl1117|Cyanobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.48e-39
EggNOG OGsCOG0451@1|root,COG0451@2|Bacteria,1G0RR@1117|Cyanobacteria,1H24R@1129|Synechococcus
Description3-beta hydroxysteroid dehydrogenase/isomerase family
Cds size1137
COG categoryGM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186151.6516857-CDS-P-wetherbeei_contig18650:67..12041683186151.6516857-CDS-P-wetherbeei_contig18650:67..1204Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18650 68..1204 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18650.1.1prot_P-wetherbeei_contig18650.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18650 68..1204 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18650.1.1

>prot_P-wetherbeei_contig18650.1.1 ID=prot_P-wetherbeei_contig18650.1.1|Name=mRNA_P-wetherbeei_contig18650.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=379bp
RILVTGATGFIGSRLCEMLSLDHQLPYRALVRNFARAARIARLGPEMVAG
DLSDAASLVRAVEGCDVVINLAHGDDKDARRQAKHLVAACRRGVKRVVHV
SSMAVHGPQPGLPVMTEANAPRGPWREAYSDAKAEAEDIVLSGGRRHGFP
VVVVRPTVVYGPFSFFVTPIVDEAHAGRLSLIDSGRGICNAVYVDDVCDA
IMVAVENDAVSGQSFLVNGDDRLSWREFHETFATMVERPHTVFDHASDAI
EAHWANLEPRFATSVSALVRLAASPAFHAQLATVPPLGAFIRGLKELVAG
AISAEQKLAIKRRVQGRRAVEASAPAVRIPSRGRVVREAYRTWIDNSHAK
TVLGWQPQHRFADGAARTADWLRFARMI*
back to top

mRNA from alignment at P-wetherbeei_contig18650:68..1204+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18650.1.1 ID=mRNA_P-wetherbeei_contig18650.1.1|Name=mRNA_P-wetherbeei_contig18650.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1137bp|location=Sequence derived from alignment at P-wetherbeei_contig18650:68..1204+ (Phaeothamnion wetherbeei SAG_119_79)
AGAATCCTGGTCACCGGTGCTACCGGCTTCATCGGTTCTCGGCTGTGCGA GATGCTCTCTCTTGACCATCAATTGCCGTACCGGGCGCTCGTCCGCAACT TCGCACGGGCGGCGCGCATCGCGCGGCTCGGGCCCGAGATGGTGGCGGGT GATCTGTCGGACGCCGCGAGCCTGGTCCGCGCCGTCGAAGGATGCGACGT CGTCATCAACCTGGCGCACGGCGACGACAAAGACGCGCGCCGGCAGGCCA AACACCTCGTGGCCGCTTGTCGGCGCGGGGTCAAGCGGGTGGTTCATGTC AGCTCGATGGCGGTGCACGGGCCGCAGCCGGGTCTGCCTGTCATGACGGA AGCCAACGCGCCGCGCGGGCCATGGCGCGAGGCCTACTCCGACGCCAAAG CCGAGGCCGAGGACATCGTGTTGTCCGGCGGTCGCCGCCACGGCTTTCCG GTGGTGGTGGTCCGCCCCACGGTTGTTTATGGTCCGTTCAGCTTCTTCGT GACGCCCATCGTCGACGAAGCTCACGCCGGCCGGCTCAGTCTGATCGACA GCGGGCGAGGCATCTGCAACGCGGTGTATGTCGACGACGTGTGCGACGCG ATCATGGTCGCGGTCGAAAACGATGCGGTCTCGGGCCAGTCGTTCCTGGT CAACGGCGACGACCGGTTGTCGTGGCGCGAGTTCCACGAGACCTTCGCGA CGATGGTCGAGCGACCCCACACCGTTTTCGATCACGCGAGCGATGCGATC GAAGCTCACTGGGCCAACCTTGAGCCGCGGTTCGCGACCAGTGTGTCTGC GCTGGTGCGGCTGGCCGCATCGCCGGCGTTCCACGCCCAGCTCGCCACGG TGCCGCCGCTCGGTGCCTTCATTCGCGGCTTGAAAGAACTGGTGGCCGGG GCGATCAGCGCCGAGCAGAAGCTGGCGATCAAACGTCGCGTTCAGGGCCG GCGGGCGGTCGAGGCCAGCGCTCCTGCGGTCAGGATACCCAGTCGCGGCC GGGTCGTCCGCGAAGCCTATCGGACGTGGATCGACAACAGCCACGCCAAG ACCGTGCTCGGATGGCAGCCACAGCATCGTTTCGCCGACGGCGCGGCCCG AACTGCCGATTGGCTGCGCTTCGCCCGAATGATCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig18650:68..1204+

>mRNA_P-wetherbeei_contig18650.1.1 ID=mRNA_P-wetherbeei_contig18650.1.1|Name=mRNA_P-wetherbeei_contig18650.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1137bp|location=Sequence derived from alignment at P-wetherbeei_contig18650:68..1204+ (Phaeothamnion wetherbeei SAG_119_79)
AGAATCCTGGTCACCGGTGCTACCGGCTTCATCGGTTCTCGGCTGTGCGA
GATGCTCTCTCTTGACCATCAATTGCCGTACCGGGCGCTCGTCCGCAACT
TCGCACGGGCGGCGCGCATCGCGCGGCTCGGGCCCGAGATGGTGGCGGGT
GATCTGTCGGACGCCGCGAGCCTGGTCCGCGCCGTCGAAGGATGCGACGT
CGTCATCAACCTGGCGCACGGCGACGACAAAGACGCGCGCCGGCAGGCCA
AACACCTCGTGGCCGCTTGTCGGCGCGGGGTCAAGCGGGTGGTTCATGTC
AGCTCGATGGCGGTGCACGGGCCGCAGCCGGGTCTGCCTGTCATGACGGA
AGCCAACGCGCCGCGCGGGCCATGGCGCGAGGCCTACTCCGACGCCAAAG
CCGAGGCCGAGGACATCGTGTTGTCCGGCGGTCGCCGCCACGGCTTTCCG
GTGGTGGTGGTCCGCCCCACGGTTGTTTATGGTCCGTTCAGCTTCTTCGT
GACGCCCATCGTCGACGAAGCTCACGCCGGCCGGCTCAGTCTGATCGACA
GCGGGCGAGGCATCTGCAACGCGGTGTATGTCGACGACGTGTGCGACGCG
ATCATGGTCGCGGTCGAAAACGATGCGGTCTCGGGCCAGTCGTTCCTGGT
CAACGGCGACGACCGGTTGTCGTGGCGCGAGTTCCACGAGACCTTCGCGA
CGATGGTCGAGCGACCCCACACCGTTTTCGATCACGCGAGCGATGCGATC
GAAGCTCACTGGGCCAACCTTGAGCCGCGGTTCGCGACCAGTGTGTCTGC
GCTGGTGCGGCTGGCCGCATCGCCGGCGTTCCACGCCCAGCTCGCCACGG
TGCCGCCGCTCGGTGCCTTCATTCGCGGCTTGAAAGAACTGGTGGCCGGG
GCGATCAGCGCCGAGCAGAAGCTGGCGATCAAACGTCGCGTTCAGGGCCG
GCGGGCGGTCGAGGCCAGCGCTCCTGCGGTCAGGATACCCAGTCGCGGCC
GGGTCGTCCGCGAAGCCTATCGGACGTGGATCGACAACAGCCACGCCAAG
ACCGTGCTCGGATGGCAGCCACAGCATCGTTTCGCCGACGGCGCGGCCCG
AACTGCCGATTGGCTGCGCTTCGCCCGAATGATCTGA
back to top