mRNA_P-wetherbeei_contig18634.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18634.3.1 vs. uniprot
Match: A0A6A5L776_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L776_LUPAL) HSP 1 Score: 123 bits (308), Expect = 7.300e-34 Identity = 62/75 (82.67%), Postives = 63/75 (84.00%), Query Frame = 3
Query: 3 VFDKQSLPPGLCHPLTLACKRVTLLPKLRVQFAEFLQHSSLKRLGILYQTTSVGFGYGL*GGAISWNHAAARPIR 227
VFDKQSLPPGLCHP LA VTLLPKLRVQFAEFLQHSSLKRLGILY TT VGFGYGL GGAISWN AR I+
Sbjct: 107 VFDKQSLPPGLCHPKILAYIGVTLLPKLRVQFAEFLQHSSLKRLGILYLTTCVGFGYGLYGGAISWNRFPARSIQ 181
BLAST of mRNA_P-wetherbeei_contig18634.3.1 vs. uniprot
Match: A0A0H5RFD0_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RFD0_9EUKA) HSP 1 Score: 97.8 bits (242), Expect = 8.960e-25 Identity = 52/77 (67.53%), Postives = 58/77 (75.32%), Query Frame = 3
Query: 3 VFDKQSLPPGLCHPLTLACKRVTLLPKLRVQFAEFLQHSSLKRLGILYQTTSVGFGYGL*GGAISWNHAAAR--PIR 227
VF KQSLPPGLC P +A LLPK+R QFAEFLQ +SLKRLGILY +T VG GYGL GGAISW++ AR PIR
Sbjct: 13 VFAKQSLPPGLCPPQKVALMWGLLLPKVRRQFAEFLQDTSLKRLGILYHSTCVGLGYGLYGGAISWDNFTARTNPIR 89
BLAST of mRNA_P-wetherbeei_contig18634.3.1 vs. uniprot
Match: A0A6A5KV19_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5KV19_LUPAL) HSP 1 Score: 98.6 bits (244), Expect = 1.260e-22 Identity = 49/56 (87.50%), Postives = 49/56 (87.50%), Query Frame = 3
Query: 3 VFDKQSLPPGLCHPLTLACKRVTLLPKLRVQFAEFLQHSSLKRLGILYQTTSVGFG 170
VFDKQSLPPGLCHP LA VTLLPKLRVQFAEFLQHSSLKRLGILY TT VGFG
Sbjct: 191 VFDKQSLPPGLCHPKILAYIGVTLLPKLRVQFAEFLQHSSLKRLGILYLTTCVGFG 246
BLAST of mRNA_P-wetherbeei_contig18634.3.1 vs. uniprot
Match: A0A5N6L683_9ROSI (Uncharacterized protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6L683_9ROSI) HSP 1 Score: 93.6 bits (231), Expect = 3.390e-22 Identity = 49/78 (62.82%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 10 INSRYPLVCATLLHLRAKGSRFFRSYACNLPSSFSIVLSSALVYSTRPPVSVSGTDYKEELFPGTTQQPDQSDKVELH 243
++SRYPL CA LR + FFR Y NLPSSF +LSSALVYSTRPPVSVSGT Y LFPGT +P QS+K E H
Sbjct: 94 LSSRYPLACAPCHGLRLGRASFFRRYGGNLPSSFRTLLSSALVYSTRPPVSVSGTVYTVGLFPGTASKPGQSNKAEQH 171
BLAST of mRNA_P-wetherbeei_contig18634.3.1 vs. uniprot
Match: Q3BKI0_9PROT (Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=Q3BKI0_9PROT) HSP 1 Score: 90.9 bits (224), Expect = 1.700e-21 Identity = 49/77 (63.64%), Postives = 56/77 (72.73%), Query Frame = 1
Query: 1 VFLINSRYPLVCATLLHLRAKGSRFFRSYACNLPSSFSIVLSSALVYSTRPPVSVSGTDYKEELFPGTTQQPDQSDK 231
+FL+NSR+PLVCAT +LR RSY NLPSSF+ +LSSALVYST PPVSVSGT Y ELFPG + QSDK
Sbjct: 1 MFLVNSRHPLVCATYHYLRNGRYPLSRSYGVNLPSSFNTILSSALVYSTSPPVSVSGTVYTLELFPGPSSLHPQSDK 77
BLAST of mRNA_P-wetherbeei_contig18634.3.1 vs. uniprot
Match: E2CDK8_9HYPH (Uncharacterized protein n=1 Tax=Roseibium sp. TrichSKD4 TaxID=744980 RepID=E2CDK8_9HYPH) HSP 1 Score: 85.9 bits (211), Expect = 1.380e-20 Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 3
Query: 51 LACKRVTLLPKLRVQFAEFLQHSSLKRLGILYQTTSVGFGYGL*GGAISWNHAAARPIR 227
+A K V+LL LR FAEFLQHSSLKRLGILYQ+T VGFGYGL GGAISWN AA PI+
Sbjct: 2 VAHKEVSLLANLREHFAEFLQHSSLKRLGILYQSTCVGFGYGLYGGAISWNTFAAPPIQ 60
BLAST of mRNA_P-wetherbeei_contig18634.3.1 vs. uniprot
Match: A0A6A5L5E7_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L5E7_LUPAL) HSP 1 Score: 87.8 bits (216), Expect = 1.870e-18 Identity = 44/59 (74.58%), Postives = 46/59 (77.97%), Query Frame = 3
Query: 3 VFDKQSLPPGLCHPLTLACKRVTLLPKLRVQFAEFLQHSSLKRLGILYQTTSVGFGYGL 179
V DKQS PPGLC LA R L+PKLR Q AEFLQHSSLKRLGILYQ+T VGFGYGL
Sbjct: 284 VLDKQSPPPGLCPSARLASNRGLLIPKLRRQIAEFLQHSSLKRLGILYQSTCVGFGYGL 342
BLAST of mRNA_P-wetherbeei_contig18634.3.1 vs. uniprot
Match: A0A6A5L269_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L269_LUPAL) HSP 1 Score: 87.8 bits (216), Expect = 1.900e-18 Identity = 44/59 (74.58%), Postives = 46/59 (77.97%), Query Frame = 3
Query: 3 VFDKQSLPPGLCHPLTLACKRVTLLPKLRVQFAEFLQHSSLKRLGILYQTTSVGFGYGL 179
V DKQS PPGLC LA R L+PKLR Q AEFLQHSSLKRLGILYQ+T VGFGYGL
Sbjct: 335 VLDKQSPPPGLCPSARLASNRGLLIPKLRRQIAEFLQHSSLKRLGILYQSTCVGFGYGL 393
BLAST of mRNA_P-wetherbeei_contig18634.3.1 vs. uniprot
Match: A0A6A5L1U4_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L1U4_LUPAL) HSP 1 Score: 87.8 bits (216), Expect = 1.920e-18 Identity = 44/59 (74.58%), Postives = 46/59 (77.97%), Query Frame = 3
Query: 3 VFDKQSLPPGLCHPLTLACKRVTLLPKLRVQFAEFLQHSSLKRLGILYQTTSVGFGYGL 179
V DKQS PPGLC LA R L+PKLR Q AEFLQHSSLKRLGILYQ+T VGFGYGL
Sbjct: 293 VLDKQSPPPGLCPSARLASNRGLLIPKLRRQIAEFLQHSSLKRLGILYQSTCVGFGYGL 351
BLAST of mRNA_P-wetherbeei_contig18634.3.1 vs. uniprot
Match: A0A2A3MP34_9SPHN (Uncharacterized protein n=1 Tax=Sphingobium sp. D43FB TaxID=2017595 RepID=A0A2A3MP34_9SPHN) HSP 1 Score: 73.9 bits (180), Expect = 1.020e-15 Identity = 34/45 (75.56%), Postives = 35/45 (77.78%), Query Frame = 2
Query: 65 GHASSEVTRAICRVPSA*FSQAPWYTLPDHQCRFRVRTIRRSYFL 199
G SSE T AICRVPS FSQ PWYTLP H CRFRVR+IRR YFL
Sbjct: 2 GPPSSEGTEAICRVPSGYFSQTPWYTLPFHLCRFRVRSIRRGYFL 46 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18634.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18634.3.1 >prot_P-wetherbeei_contig18634.3.1 ID=prot_P-wetherbeei_contig18634.3.1|Name=mRNA_P-wetherbeei_contig18634.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=82bp VFLINSRYPLVCATLLHLRAKGSRFFRSYACNLPSSFSIVLSSALVYSTRback to top mRNA from alignment at P-wetherbeei_contig18634:1057..1302- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18634.3.1 ID=mRNA_P-wetherbeei_contig18634.3.1|Name=mRNA_P-wetherbeei_contig18634.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=246bp|location=Sequence derived from alignment at P-wetherbeei_contig18634:1057..1302- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18634:1057..1302- >mRNA_P-wetherbeei_contig18634.3.1 ID=mRNA_P-wetherbeei_contig18634.3.1|Name=mRNA_P-wetherbeei_contig18634.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=246bp|location=Sequence derived from alignment at P-wetherbeei_contig18634:1057..1302- (Phaeothamnion wetherbeei SAG_119_79)back to top |