mRNA_P-wetherbeei_contig1860.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1860.2.1
Unique NamemRNA_P-wetherbeei_contig1860.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1860.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1860contigP-wetherbeei_contig1860:4958..5480 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FK08
PFAMsPP2C,Pkinase,cNMP_binding
Model size377
Max annot lvl2759|Eukaryota
KEGG koko:K07359
KEGG Pathwayko04140,ko04152,ko04211,ko04920,ko04921,ko05034,map04140,map04152,map04211,map04920,map04921,map05034
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.56e-12
EggNOG OGsKOG0585@1|root,KOG0585@2759|Eukaryota
EC2.7.11.17
Descriptionpeptidyl-threonine phosphorylation
Cds size375
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186150.524013-CDS-P-wetherbeei_contig1860:4958..51691683186150.524013-CDS-P-wetherbeei_contig1860:4958..5169Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1860 4959..5169 -
1683186150.5345764-CDS-P-wetherbeei_contig1860:5316..54801683186150.5345764-CDS-P-wetherbeei_contig1860:5316..5480Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1860 5317..5480 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1860.2.1prot_P-wetherbeei_contig1860.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1860 4959..5480 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1860.2.1

>prot_P-wetherbeei_contig1860.2.1 ID=prot_P-wetherbeei_contig1860.2.1|Name=mRNA_P-wetherbeei_contig1860.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp
AGHSAGRSGAGQGGAGRRRGSGNMDKDGVEAIAHPEWTALSPADRAFMQE
NEGIRRVLLSVQDLHFAEFPPERQVSLLRCLRPARFTRGQVIIREGDYAD
AFYFIVGSPRGAAGSNDVGGGGKGG
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mRNA from alignment at P-wetherbeei_contig1860:4958..5480-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1860.2.1 ID=mRNA_P-wetherbeei_contig1860.2.1|Name=mRNA_P-wetherbeei_contig1860.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=523bp|location=Sequence derived from alignment at P-wetherbeei_contig1860:4958..5480- (Phaeothamnion wetherbeei SAG_119_79)
GCGGGCCACAGCGCGGGGCGCAGCGGCGCAGGCCAAGGCGGCGCCGGCAG
GAGGCGAGGTAGCGGCAACATGGACAAAGACGGCGTCGAGGCCATTGCGC
ATCCGGAATGGACGGCGCTATCACCCGCCGATCGCGCCTTCATGCAGGAG
AATGAGGGGATAAGGTACGTAAATTGTCATCGTTAAACCGAAACACCCTG
TGTGCGTTCTTAGCTGAAACACATCCCATCTTTCGTGGAATTGAAGCCGC
ATCTTCAAAGCCCTACATTTTCTCATTTCCCCTCTTCTTTTCCCCGCCTC
TTTGCTTCCAGGCGTGTGCTTTTGAGTGTCCAAGACCTGCACTTCGCCGA
GTTCCCGCCGGAGCGGCAGGTCTCGCTGCTCCGCTGCCTGCGGCCGGCCC
GCTTCACCCGCGGACAAGTCATCATCCGCGAGGGCGACTACGCTGATGCC
TTTTACTTCATCGTCGGCTCGCCTCGCGGCGCCGCCGGCAGCAATGACGT
CGGCGGCGGCGGTAAGGGCGGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1860:4958..5480-

>mRNA_P-wetherbeei_contig1860.2.1 ID=mRNA_P-wetherbeei_contig1860.2.1|Name=mRNA_P-wetherbeei_contig1860.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig1860:4958..5480- (Phaeothamnion wetherbeei SAG_119_79)
GCGGGCCACAGCGCGGGGCGCAGCGGCGCAGGCCAAGGCGGCGCCGGCAG
GAGGCGAGGTAGCGGCAACATGGACAAAGACGGCGTCGAGGCCATTGCGC
ATCCGGAATGGACGGCGCTATCACCCGCCGATCGCGCCTTCATGCAGGAG
AATGAGGGGATAAGGCGTGTGCTTTTGAGTGTCCAAGACCTGCACTTCGC
CGAGTTCCCGCCGGAGCGGCAGGTCTCGCTGCTCCGCTGCCTGCGGCCGG
CCCGCTTCACCCGCGGACAAGTCATCATCCGCGAGGGCGACTACGCTGAT
GCCTTTTACTTCATCGTCGGCTCGCCTCGCGGCGCCGCCGGCAGCAATGA
CGTCGGCGGCGGCGGTAAGGGCGGC
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