mRNA_P-wetherbeei_contig18580.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18580.1.1
Unique NamemRNA_P-wetherbeei_contig18580.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18580.1.1 vs. uniprot
Match: A0A1M5M0G7_9BRAD (Putative ABC transport system substrate-binding protein n=3 Tax=Bradyrhizobium TaxID=374 RepID=A0A1M5M0G7_9BRAD)

HSP 1 Score: 343 bits (879), Expect = 1.650e-114
Identity = 178/322 (55.28%), Postives = 232/322 (72.05%), Query Frame = 1
Query:    1 MKRRQFLGVAGGAVLAWPLALRAQT-KLPVIGVLVAAN--PEPFWSRLQESLRDLGYIEGKTVRFEFRSANGKPDLLDGLAEELVRLKVDLIVVQLTPAAFAARKATTVIPIVMSSVADPVGTGLVASLARPGGNITGFSGTTGELGAKILELVREMLPSAQRVGVLVNATDPFSKIFVEQVERGGRALALTVHPVTVDGVEGFETAIATMARERADVIVVQPSLPLKTASDLALKYRLPSISPGRFFT-GAGGLMSYSAELTEVYRNVALNVDRILKGAKPSELPVLQPTRYELIINLKTAKALGIVIPPALLARADEAIE 954
            ++RR+F+G+   A    PLA  AQ  ++P +G LV  N  PE FW   ++ L DLGY+EG+ +RFEFRSA G  D L  LA ELVRLKVD+IV   TPAA AA++AT  IPIVM+   DPVGTGLVASL RPGGN+TG +  T EL  K ++L+R+MLP A+RV  L NATDPFSK F+EQ+  GG A   T++PV +   E  ETA A+M ++R D ++VQPSLP + A++LALK+R+P++S  R+F    GGLMSYSA   +++R  A+ VD+ILKGA+P++LPV +PT +EL IN+KTAKALGI +PP LLARAD  IE
Sbjct:    4 LRRREFIGLLASAAAVRPLAAHAQQPQMPTVGALVIGNINPEQFWREFRQGLSDLGYVEGQNIRFEFRSAEGHLDRLPELAAELVRLKVDIIVTWFTPAALAAKQATLEIPIVMAETGDPVGTGLVASLPRPGGNVTGIASATAELAGKSVQLIRDMLPRARRVTALANATDPFSKPFLEQIRLGGEATGTTINPVRISSSEELETAFASMEKDRPDAVIVQPSLPSRHAAELALKHRVPAVSVPRWFAEDEGGLMSYSARYVDLFRKAAVYVDKILKGAQPADLPVERPTHFELTINMKTAKALGIDVPPTLLARADVVIE 325          
BLAST of mRNA_P-wetherbeei_contig18580.1.1 vs. uniprot
Match: A0A537SN57_9PROT (ABC transporter substrate-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SN57_9PROT)

HSP 1 Score: 330 bits (846), Expect = 1.670e-109
Identity = 175/325 (53.85%), Postives = 230/325 (70.77%), Query Frame = 1
Query:    1 MKRRQFLGVAGGAVLA---WPLALRAQT--KLPVIGVLVAANPEP--FWSRLQESLRDLGYIEGKTVRFEFRSANGKPDLLDGLAEELVRLKVDLIVVQLTPAAFAARKATTVIPIVMSSVADPVGTGLVASLARPGGNITGFSGTTGELGAKILELVREMLPSAQRVGVLVNATDPFSKIFVEQVERGGRALALTVHPVTVDGVEGFETAIATMARERADVIVVQPSLPLKTASDLALKYRLPSISPGRFFTGAGGLMSYSAELTEVYRNVALNVDRILKGAKPSELPVLQPTRYELIINLKTAKALGIVIPPALLARADEAIE 954
            MKRR+F+ V   A      WP A  AQ   K+ V+G LV  N +P  FW   ++ +RDLGYIEG+ +R+EFRSA+G+ + L  LA ELVRLKVD+IV   TP A AA++AT  IPIVM+   DP+G GLVASL RPGGN+TG +  T EL  K ++L+R+MLPSA+RV VL NATDPF K F+EQV+ GG A   T++ V +   E  ETA A M ++R D ++VQPSLP K A++LAL+ R+P++S  R+F   GGLMSY  +  E++   A  VD+ILKGA+P++LPV QPT +EL+IN++TAKALG+ +PP LLARADE IE
Sbjct:    1 MKRREFMLVVTAAATPFSLWPRAGSAQQAPKVAVVGALVIGNTDPGQFWREFRQGMRDLGYIEGQNIRYEFRSAHGQLERLSELAAELVRLKVDVIVTWFTPTAQAAKQATHEIPIVMADTGDPIGIGLVASLPRPGGNVTGIASVTAELAGKSVQLIRDMLPSARRVTVLANATDPFVKPFLEQVQLGGAATGTTINAVRISSNEEMETAFAGMEKDRPDAVIVQPSLPSKRAAELALEQRVPAVSVPRWFAEEGGLMSYCPKYAELFHRAAAYVDKILKGAQPADLPVEQPTHFELVINMRTAKALGLTVPPDLLARADEVIE 325          
BLAST of mRNA_P-wetherbeei_contig18580.1.1 vs. uniprot
Match: A0A1Q5RHL2_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobium TaxID=374 RepID=A0A1Q5RHL2_9BRAD)

HSP 1 Score: 327 bits (837), Expect = 3.260e-108
Identity = 176/321 (54.83%), Postives = 226/321 (70.40%), Query Frame = 1
Query:    1 MKRRQFLGVAGGAVLAWPLALRAQTK-LPVIGVLVAANP--EPFWSRLQESLRDLGYIEGKTVRFEFRSANGKPDLLDGLAEELVRLKVDLIVVQLTPAAFAARKATTVIPIVMSSVADPVGTGLVASLARPGGNITGFSGTTGELGAKILELVREMLPSAQRVGVLVNATDPFSKIFVEQVERGGRALALTVHPVTVDGVEGFETAIATMARERADVIVVQPSLPLKTASDLALKYRLPSISPGRFFTGAGGLMSYSAELTEVYRNVALNVDRILKGAKPSELPVLQPTRYELIINLKTAKALGIVIPPALLARADEAIE 954
            M+RR+F+ + GGA  AWPLA RAQ + +  IGVLV A P  E FW    ++LRDLGYI+GK +RFEFRS  G+   L  LA ELVRLKV+LIV   TPAA AA++AT  IPI+ ++  D VGTGLV SLARPGGN+TG S    EL AK +EL+RE++PSA+RV  L NA DPFSK F++Q++  G A    + PV +   E  + A A M  +  D IVVQPSLP K A+DLAL YR+P++   R F   GGL +Y     ++YR  A+ VD+ILKGAKP++LPV QPT++E+++N+KTAKALGI + PA+LARADE IE
Sbjct:    1 MQRREFIRLVGGAT-AWPLAARAQQRNVATIGVLVRAAPGWERFWRLFPQALRDLGYIDGKNIRFEFRSDQGQMSHLPELAAELVRLKVNLIVPWFTPAALAAKQATHEIPIICAACGDMVGTGLVESLARPGGNVTGNSSLNAELAAKTVELIREIVPSAKRVAALANAADPFSKSFLKQIQLAGEATGTVIDPVMIHDAEELDAAFAAMGGQLTDAIVVQPSLPTKRAADLALSYRIPAVCAWRQFPRDGGLAAYFGAEDDMYRQAAVFVDKILKGAKPADLPVEQPTKFEIVVNVKTAKALGITVRPAILARADEVIE 320          
BLAST of mRNA_P-wetherbeei_contig18580.1.1 vs. uniprot
Match: A0A537VET5_9PROT (ABC transporter substrate-binding protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537VET5_9PROT)

HSP 1 Score: 318 bits (814), Expect = 3.900e-105
Identity = 161/291 (55.33%), Postives = 212/291 (72.85%), Query Frame = 1
Query:   88 IGVLV--AANPEPFWSRLQESLRDLGYIEGKTVRFEFRSANGKPDLLDGLAEELVRLKVDLIVVQLTPAAFAARKATTVIPIVMSSVADPVGTGLVASLARPGGNITGFSGTTGELGAKILELVREMLPSAQRVGVLVNATDPFSKIFVEQVERGGRALALTVHPVTVDGVEGFETAIATMARERADVIVVQPSLPLKTASDLALKYRLPSISPGRFFTGAGGLMSYSAELTEVYRNVALNVDRILKGAKPSELPVLQPTRYELIINLKTAKALGIVIPPALLARADEAIE 954
            IG LV  + +PE FW   ++ LR+LG++EG+ +RFEFRSA G+ D L  LA ELVRLKVD+IV   TP   AA++AT  IPIVM+   DP+GTGLVASL RPGGN+TG +  + EL  K ++L+R+MLPSA+RV  L NATDPFSK F+EQ++ GG A   T++PV + G E  E A A M ++R D ++VQPSLP K A++LALK R+P++S  R+F   GGLMSYS    +++   A+ VD+ILKGA P++LPV QPTR+EL+IN+KTAKALG+ IP   + RADE IE
Sbjct:    2 IGALVLGSTDPEQFWRDFRQGLRELGHVEGQNIRFEFRSAQGQADRLPELAAELVRLKVDVIVTWFTPPTQAAKQATHEIPIVMADTGDPIGTGLVASLPRPGGNVTGIASVSAELAGKSVQLIRDMLPSARRVTALANATDPFSKPFLEQIKLGGEATGTTINPVRIGGNEELEAAFAAMEKDRPDAVIVQPSLPSKRAAELALKQRVPAVSVPRWFAEEGGLMSYSPRYADLFHKAAVYVDKILKGAHPADLPVEQPTRFELVINMKTAKALGLAIPETFVLRADEVIE 292          
BLAST of mRNA_P-wetherbeei_contig18580.1.1 vs. uniprot
Match: UPI001BAE2389 (ABC transporter substrate-binding protein n=2 Tax=Bradyrhizobium TaxID=374 RepID=UPI001BAE2389)

HSP 1 Score: 316 bits (809), Expect = 5.700e-104
Identity = 161/320 (50.31%), Postives = 222/320 (69.38%), Query Frame = 1
Query:    1 MKRRQFLGVAGGAVLAWPLALRAQTKLPVIGVLVAANP--EPFWSRLQESLRDLGYIEGKTVRFEFRSANGKPDLLDGLAEELVRLKVDLIVVQLTPAAFAARKATTVIPIVMSSVADPVGTGLVASLARPGGNITGFSGTTGELGAKILELVREMLPSAQRVGVLVNATDPFSKIFVEQVERGGRALALTVHPVTVDGVEGFETAIATMARERADVIVVQPSLPLKTASDLALKYRLPSISPGRFFTGAGGLMSYSAELTEVYRNVALNVDRILKGAKPSELPVLQPTRYELIINLKTAKALGIVIPPALLARADEAIE 954
            M+RR  +   G A +    A   Q K+P IGVLV  +P  E FW   Q+ +R+LGYIEG+ VR+EFRS  G+   L  LAEELVRLKVDLIV   TPAA AAR+AT  IPIVM+ V +PV TGLVAS+A+PGGNITG +    EL  K++++VR+++P+AQR+  L N  DPFSK F+++VE  G A  + ++PV +      + A + +  E  D ++VQPSLP++  ++LA++YR+P++S  R F   GGL+SY ++  + YR  A  VD+ILKGAKP++LPV QPT++EL+INLKTAKA+G+ +P + L RADE IE
Sbjct:    1 MRRRDLIAFVGAASVLASFASAQQPKMPTIGVLVVGSPASERFWRLFQQDMRELGYIEGRNVRYEFRSDAGQTSRLSSLAEELVRLKVDLIVAWFTPAALAARQATHQIPIVMALVGNPVETGLVASVAQPGGNITGMAAIGAELAGKLVDVVRQLIPAAQRIAALANVPDPFSKPFLQRVESDGAAAGVMINPVMIHSSTELDAAFSALDHEAPDALIVQPSLPIRRVAELAVRYRIPAMSFVREFADQGGLLSYGSDEADAYRKAATYVDKILKGAKPADLPVQQPTKFELVINLKTAKAIGLTVPQSFLLRADEVIE 320          
BLAST of mRNA_P-wetherbeei_contig18580.1.1 vs. uniprot
Match: A0A537SUF5_9PROT (ABC transporter substrate-binding protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SUF5_9PROT)

HSP 1 Score: 308 bits (789), Expect = 5.520e-101
Identity = 175/320 (54.69%), Postives = 221/320 (69.06%), Query Frame = 1
Query:    1 MKRRQFLGVAGGAVLAWPLALRAQT--KLPVIGVLVAANPEPFWSRLQESLRDLGYIEGKTVRFEFRSANGKPDLLDGLAEELVRLKVDLIVVQLTPAAFAARKATTVIPIVMSSVADPVGTGLVASLARPGGNITGFSGTTGELGAKILELVREMLPSAQRVGVLVNATDPFSKIFVEQVERGGRALALTVHPVTVDGVEGFETAIATMARERADVIVVQPSLPLKTASDLALKYRLPSISPGRFFTGAGGLMSYSAELTEVYRNVALNVDRILKGAKPSELPVLQPTRYELIINLKTAKALGIVIPPALLARADEAIE 954
            MKRR+ + V GGA  AWPLA  AQ   ++  IG+L+ +  EP     +E+L D+GY+EGK ++ E RSA G+   +  LA ELVR +VD+I+   TPAA AA+ AT  IPI++ +  DP+ TGL+ +LARPGGNITG S T  E  AK LEL+ E+ P A+RVGVL NA DPF K F EQ++RG  ++ L V  + V G +    A AT+ARERAD +V+Q SLP+K   DLALKY+LPS+S  +    AG LMSYSA   E  R +A  VD ILKGAKP++LPV QPTRYEL INLKTAKALG+ +PP LLARADE IE
Sbjct:    1 MKRREVISVIGGAA-AWPLAAGAQQGERMRRIGLLLVSGSEPL-GPFREALADIGYVEGKNIQIEVRSAQGQDTRVLELAAELVRSRVDVIIAVQTPAAHAAKNATRDIPIIVMA-GDPIATGLITNLARPGGNITGLSATAAEAAAKSLELIAEIKPGARRVGVLGNADDPFIKPFFEQIQRGAPSVRLEVREIIVRGSDELNGAFATIARERADAVVIQGSLPVKPTVDLALKYQLPSLSTQKSAVQAGILMSYSASFAERARVIANYVDEILKGAKPADLPVQQPTRYELAINLKTAKALGLDVPPTLLARADEVIE 317          
BLAST of mRNA_P-wetherbeei_contig18580.1.1 vs. uniprot
Match: UPI001BAA2A0B (ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium jicamae TaxID=280332 RepID=UPI001BAA2A0B)

HSP 1 Score: 308 bits (789), Expect = 6.720e-101
Identity = 164/321 (51.09%), Postives = 218/321 (67.91%), Query Frame = 1
Query:    1 MKRRQFLGVAGGAVLAWPLALRAQT-KLPVIGVLVAANP--EPFWSRLQESLRDLGYIEGKTVRFEFRSANGKPDLLDGLAEELVRLKVDLIVVQLTPAAFAARKATTVIPIVMSSVADPVGTGLVASLARPGGNITGFSGTTGELGAKILELVREMLPSAQRVGVLVNATDPFSKIFVEQVERGGRALALTVHPVTVDGVEGFETAIATMARERADVIVVQPSLPLKTASDLALKYRLPSISPGRFFTGAGGLMSYSAELTEVYRNVALNVDRILKGAKPSELPVLQPTRYELIINLKTAKALGIVIPPALLARADEAIE 954
            ++RR+F+ +  GAV  WPL+ RAQ   +  IGVLV A P  E FW    ++LR+LGYIEGK ++FEFRS  G    L  LA  LVRLKV +IV   TPAA AA++AT  IPI+ ++  D VGTGLV SL RPGGN+TG S    EL AK L+L+REM+PSA+R+  LVNA+D FSK F++Q++  G A    + P+ + G E  + A   M   R D I+VQPSLP K A+DLAL+YR+P++   R F   GGL +Y     E+Y+  A+ VD+ILKG+KP+ELPV QPT++EL++N+KTAKALGI +   +L R D+ IE
Sbjct:    3 VRRREFVTLVVGAVATWPLSARAQQPSVATIGVLVHAAPGWERFWQLFPQALRELGYIEGKNIQFEFRSDQGDISRLPELAAHLVRLKVKVIVPWFTPAAIAAKQATREIPIICAACGDMVGTGLVESLDRPGGNVTGNSSLNAELAAKTLDLIREMIPSAKRIAALVNASDAFSKSFLKQIQLVGEATGTVIDPIMIHGAEELDAAFPIMEGRRTDAIIVQPSLPTKRAADLALRYRIPAVCAWRQFPRDGGLAAYFGAEDEMYQRAAVFVDKILKGSKPAELPVEQPTKFELVVNMKTAKALGIAVSQEILVRTDQLIE 323          
BLAST of mRNA_P-wetherbeei_contig18580.1.1 vs. uniprot
Match: UPI001BA475BA (ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium liaoningense TaxID=43992 RepID=UPI001BA475BA)

HSP 1 Score: 307 bits (787), Expect = 1.260e-100
Identity = 155/321 (48.29%), Postives = 222/321 (69.16%), Query Frame = 1
Query:    1 MKRRQFLGVAGGAVLAWPLALRAQT-KLPVIGVLVAANP--EPFWSRLQESLRDLGYIEGKTVRFEFRSANGKPDLLDGLAEELVRLKVDLIVVQLTPAAFAARKATTVIPIVMSSVADPVGTGLVASLARPGGNITGFSGTTGELGAKILELVREMLPSAQRVGVLVNATDPFSKIFVEQVERGGRALALTVHPVTVDGVEGFETAIATMARERADVIVVQPSLPLKTASDLALKYRLPSISPGRFFTGAGGLMSYSAELTEVYRNVALNVDRILKGAKPSELPVLQPTRYELIINLKTAKALGIVIPPALLARADEAIE 954
            M+RR+FL +  GA    P A  AQ  K+P IGVLV  +P  E FW   Q+ +R+LGYIEG+ V+++FRS  G+   L  LAEELVRL+VDLIVV  TPAA AAR+AT  IPIVM+ V +PV TGLVA+LA+PGGN+TG +    EL  K+++++R+++P  +R+  L N TDPFSK F+ ++E  G A  L + PV +      + + + + +E  D +++QPSLP++  ++LA+ YRLP++S  R F   GGL+SY ++  + YR  A  VD ILKGAK + LPV QPT+++ ++NL+TAKALG+ +P ++L+RADE IE
Sbjct:    1 MRRREFLALLAGAAAIQPSASMAQRLKVPTIGVLVVGSPASERFWRLFQQDMRELGYIEGRNVQYQFRSDMGQAGRLPALAEELVRLQVDLIVVWFTPAALAARQATHEIPIVMALVGNPVETGLVATLAKPGGNVTGMAAIGAELAGKLVDVIRQLMPGVRRIAALANVTDPFSKPFLREIESNGAAAGLMIDPVMIPSSTELDASFSALDKEPPDALIIQPSLPIRRVAELAVHYRLPAVSFVRDFADQGGLLSYGSDEADAYRKAATYVDEILKGAKAANLPVQQPTKFQFVVNLRTAKALGLTVPQSMLSRADEVIE 321          
BLAST of mRNA_P-wetherbeei_contig18580.1.1 vs. uniprot
Match: A0A7S7UP91_9BRAD (ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. CCBAU 53338 TaxID=1325111 RepID=A0A7S7UP91_9BRAD)

HSP 1 Score: 303 bits (776), Expect = 5.130e-99
Identity = 170/320 (53.12%), Postives = 220/320 (68.75%), Query Frame = 1
Query:    1 MKRRQFLGVAGGAVLAWPLALRAQT--KLPVIGVLVAANPEPFWSRLQESLRDLGYIEGKTVRFEFRSANGKPDLLDGLAEELVRLKVDLIVVQLTPAAFAARKATTVIPIVMSSVADPVGTGLVASLARPGGNITGFSGTTGELGAKILELVREMLPSAQRVGVLVNATDPFSKIFVEQVERGGRALALTVHPVTVDGVEGFETAIATMARERADVIVVQPSLPLKTASDLALKYRLPSISPGRFFTGAGGLMSYSAELTEVYRNVALNVDRILKGAKPSELPVLQPTRYELIINLKTAKALGIVIPPALLARADEAIE 954
            M+RR+F+G+  G  L WPLA RAQ   ++  IGVL+ + PE      +ESL +LGY EGK ++ E RSA  +   L  LA +LVR +VD+IV   TPA +AA+ AT  IPIVM +  DP+GTGL+++LARPGGN+TG SG   EL AK LEL+ +M+P+A+ VGVL NA DPF K F+E +E+    + L VH + V      + A A +AR +AD +++Q SL  K A DLALKYR+PS+S       AG LMSY+A+LTE  + +A  VDRILKG KP +LPV QPTRYEL INLKTAKALG+ +PP LLARAD+ IE
Sbjct:    1 MRRREFIGLVSGTAL-WPLATRAQQPRRMARIGVLLVSGPE-LMGPFRESLHELGYAEGKNIQIEVRSAQNQLARLPELATQLVRSQVDVIVAIQTPAVYAAKNATRDIPIVMMA-GDPIGTGLISNLARPGGNLTGLSGAAAELAAKSLELIPQMIPAARYVGVLGNANDPFMKPFLEDIEQAAPKVRLEVHEIIVRSGSELDDAFAALARAQADAVMIQGSLSDKLAVDLALKYRMPSLSTQNSAVQAGLLMSYTADLTERGQEIAQYVDRILKGTKPGDLPVQQPTRYELAINLKTAKALGLAVPPVLLARADKVIE 317          
BLAST of mRNA_P-wetherbeei_contig18580.1.1 vs. uniprot
Match: A0A2U3Q706_9BRAD (Uncharacterized protein n=3 Tax=Bradyrhizobium vignae TaxID=1549949 RepID=A0A2U3Q706_9BRAD)

HSP 1 Score: 300 bits (768), Expect = 9.200e-98
Identity = 162/321 (50.47%), Postives = 216/321 (67.29%), Query Frame = 1
Query:    1 MKRRQFLGVAGGAVLAWPLALRAQ-TKLPVIGVLVAANPEP--FWSRLQESLRDLGYIEGKTVRFEFRSANGKPDLLDGLAEELVRLKVDLIVVQLTPAAFAARKATTVIPIVMSSVADPVGTGLVASLARPGGNITGFSGTTGELGAKILELVREMLPSAQRVGVLVNATDPFSKIFVEQVERGGRALALTVHPVTVDGVEGFETAIATMARERADVIVVQPSLPLKTASDLALKYRLPSISPGRFFTGAGGLMSYSAELTEVYRNVALNVDRILKGAKPSELPVLQPTRYELIINLKTAKALGIVIPPALLARADEAIE 954
            MKRR+F+ + G A  AWP   RAQ  K P +GVL+  NP+P  F    +E L+ LGY+EG+ +  E +SA G P+ L  LA ELV L VD+IV   TP+  AA++ATT IPIVMS  ADP+ TG VAS +RPGGNITG +  TGE+  K L+ +RE+LP+ ++V VL NA DPF + F+E +    RAL   + PV V G + F TA   M    A  ++VQPSLP + A++ ALK  LP  +P   FT AGGL+SYSA++  VYR  A+ V +I+KG KPS+LPV  PT+++L++N+KTA+ALG+ + P LLARADE IE
Sbjct:    1 MKRRKFIALLG-ATAAWPPTARAQQAKSPRVGVLMLGNPDPAFFLGTFREELQKLGYLEGQNLTLESQSAGGFPERLPSLARELVDLNVDVIVGYQTPSVAAAKQATTKIPIVMSPAADPIATGFVASFSRPGGNITGVASATGEVAGKNLDFIREILPTVRKVAVLGNAIDPFHQPFLESIALAARALQFEIKPVLVRGSDEFATAFGQMVTSGAGALIVQPSLPRQPAAEAALKSHLPLFAPSDEFTRAGGLLSYSADIMSVYRKAAIFVHKIVKGGKPSDLPVEFPTKFQLVVNIKTARALGVTLLPTLLARADEVIE 320          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18580.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1M5M0G7_9BRAD1.650e-11455.28Putative ABC transport system substrate-binding pr... [more]
A0A537SN57_9PROT1.670e-10953.85ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A1Q5RHL2_9BRAD3.260e-10854.83Uncharacterized protein n=2 Tax=Bradyrhizobium Tax... [more]
A0A537VET5_9PROT3.900e-10555.33ABC transporter substrate-binding protein (Fragmen... [more]
UPI001BAE23895.700e-10450.31ABC transporter substrate-binding protein n=2 Tax=... [more]
A0A537SUF5_9PROT5.520e-10154.69ABC transporter substrate-binding protein n=2 Tax=... [more]
UPI001BAA2A0B6.720e-10151.09ABC transporter substrate-binding protein n=1 Tax=... [more]
UPI001BA475BA1.260e-10048.29ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A7S7UP91_9BRAD5.130e-9953.13ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A2U3Q706_9BRAD9.200e-9850.47Uncharacterized protein n=3 Tax=Bradyrhizobium vig... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18580contigP-wetherbeei_contig18580:32..988 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog189753.AXAS01000041_gene2534
PFAMsABC_sub_bind
Model size957
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K01989
KEGG ModuleM00247
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.95e-80
EggNOG OGsCOG2984@1|root,COG2984@2|Bacteria,1MW5D@1224|Proteobacteria,2TSG1@28211|Alphaproteobacteria,3JSYZ@41294|Bradyrhizobiaceae
DescriptionABC transporter substrate binding protein
Cds size957
COG categoryS
BRITEko00000,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186149.97887-CDS-P-wetherbeei_contig18580:31..9881683186149.97887-CDS-P-wetherbeei_contig18580:31..988Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18580 32..988 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18580.1.1prot_P-wetherbeei_contig18580.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18580 32..988 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18580.1.1

>prot_P-wetherbeei_contig18580.1.1 ID=prot_P-wetherbeei_contig18580.1.1|Name=mRNA_P-wetherbeei_contig18580.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=319bp
MKRRQFLGVAGGAVLAWPLALRAQTKLPVIGVLVAANPEPFWSRLQESLR
DLGYIEGKTVRFEFRSANGKPDLLDGLAEELVRLKVDLIVVQLTPAAFAA
RKATTVIPIVMSSVADPVGTGLVASLARPGGNITGFSGTTGELGAKILEL
VREMLPSAQRVGVLVNATDPFSKIFVEQVERGGRALALTVHPVTVDGVEG
FETAIATMARERADVIVVQPSLPLKTASDLALKYRLPSISPGRFFTGAGG
LMSYSAELTEVYRNVALNVDRILKGAKPSELPVLQPTRYELIINLKTAKA
LGIVIPPALLARADEAIE*
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mRNA from alignment at P-wetherbeei_contig18580:32..988-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18580.1.1 ID=mRNA_P-wetherbeei_contig18580.1.1|Name=mRNA_P-wetherbeei_contig18580.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=957bp|location=Sequence derived from alignment at P-wetherbeei_contig18580:32..988- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGCGACGACAATTCCTCGGTGTGGCCGGTGGCGCGGTGTTGGCGTG GCCGCTAGCGCTGCGTGCCCAAACGAAGCTGCCGGTCATCGGCGTTCTCG TCGCCGCCAATCCGGAACCGTTCTGGAGCCGGCTGCAGGAGAGCCTGCGC GATCTCGGCTATATCGAAGGCAAGACCGTTCGATTTGAATTCCGTTCCGC GAACGGCAAGCCGGATCTGCTCGACGGGCTGGCCGAAGAACTGGTCCGGC TCAAAGTCGATCTGATTGTCGTACAGCTTACCCCCGCCGCATTTGCCGCA AGGAAGGCGACGACAGTGATACCGATCGTCATGTCGTCGGTGGCCGATCC CGTTGGAACGGGCCTTGTTGCCAGCCTTGCACGGCCCGGCGGCAACATTA CCGGGTTTTCCGGCACGACAGGCGAACTCGGCGCCAAGATCCTGGAGTTG GTCCGCGAGATGCTGCCGTCCGCCCAACGGGTGGGTGTCCTCGTCAACGC GACGGACCCGTTCAGCAAGATATTCGTCGAACAGGTGGAGCGGGGCGGCC GAGCGCTCGCACTCACCGTCCATCCCGTCACCGTCGATGGTGTTGAAGGA TTCGAGACCGCAATTGCCACCATGGCGAGGGAGCGGGCGGATGTGATCGT CGTCCAACCAAGCCTGCCGCTGAAGACCGCGAGCGACCTGGCGCTGAAAT ACAGATTGCCGTCGATTTCACCGGGCCGCTTTTTTACCGGCGCAGGAGGC TTGATGTCGTACTCCGCTGAACTCACCGAAGTATACCGCAACGTGGCGCT GAATGTTGATCGCATTCTGAAAGGTGCAAAACCATCCGAATTGCCGGTTC TGCAACCAACCCGTTACGAGTTGATCATCAACCTCAAGACCGCAAAGGCG CTCGGCATCGTCATCCCGCCTGCCCTGCTCGCGCGGGCCGACGAGGCGAT CGAGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18580:32..988-

>mRNA_P-wetherbeei_contig18580.1.1 ID=mRNA_P-wetherbeei_contig18580.1.1|Name=mRNA_P-wetherbeei_contig18580.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=957bp|location=Sequence derived from alignment at P-wetherbeei_contig18580:32..988- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGCGACGACAATTCCTCGGTGTGGCCGGTGGCGCGGTGTTGGCGTG
GCCGCTAGCGCTGCGTGCCCAAACGAAGCTGCCGGTCATCGGCGTTCTCG
TCGCCGCCAATCCGGAACCGTTCTGGAGCCGGCTGCAGGAGAGCCTGCGC
GATCTCGGCTATATCGAAGGCAAGACCGTTCGATTTGAATTCCGTTCCGC
GAACGGCAAGCCGGATCTGCTCGACGGGCTGGCCGAAGAACTGGTCCGGC
TCAAAGTCGATCTGATTGTCGTACAGCTTACCCCCGCCGCATTTGCCGCA
AGGAAGGCGACGACAGTGATACCGATCGTCATGTCGTCGGTGGCCGATCC
CGTTGGAACGGGCCTTGTTGCCAGCCTTGCACGGCCCGGCGGCAACATTA
CCGGGTTTTCCGGCACGACAGGCGAACTCGGCGCCAAGATCCTGGAGTTG
GTCCGCGAGATGCTGCCGTCCGCCCAACGGGTGGGTGTCCTCGTCAACGC
GACGGACCCGTTCAGCAAGATATTCGTCGAACAGGTGGAGCGGGGCGGCC
GAGCGCTCGCACTCACCGTCCATCCCGTCACCGTCGATGGTGTTGAAGGA
TTCGAGACCGCAATTGCCACCATGGCGAGGGAGCGGGCGGATGTGATCGT
CGTCCAACCAAGCCTGCCGCTGAAGACCGCGAGCGACCTGGCGCTGAAAT
ACAGATTGCCGTCGATTTCACCGGGCCGCTTTTTTACCGGCGCAGGAGGC
TTGATGTCGTACTCCGCTGAACTCACCGAAGTATACCGCAACGTGGCGCT
GAATGTTGATCGCATTCTGAAAGGTGCAAAACCATCCGAATTGCCGGTTC
TGCAACCAACCCGTTACGAGTTGATCATCAACCTCAAGACCGCAAAGGCG
CTCGGCATCGTCATCCCGCCTGCCCTGCTCGCGCGGGCCGACGAGGCGAT
CGAGTAA
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