mRNA_P-wetherbeei_contig1856.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1856.3.1 vs. uniprot
Match: A0A6V1NF58_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NF58_HETAK) HSP 1 Score: 139 bits (349), Expect = 3.480e-34 Identity = 100/308 (32.47%), Postives = 151/308 (49.03%), Query Frame = 1
Query: 163 RRHALSRRDVVAVGVIVAGIAAGAPAARAGGLGAAELDAQYYLKSLFGSNQPWPAEPPVAA--PARRLDPATASALLDIAARRTASAAGMPMAVFEPLIVKVRAAVEPAFQRKAAFP-DDPADQYCFDMLSYATYKAAAEVLPDTRKRAGLVRMIGEDALEVFAPGIGREGGREQQAVPVVNVKAAGSSGPAAAAAG-VTALLRRMQAVGLIGSFTWNEELEID-GWEDGVPLSAELVVSAPATLGAAVQAAGEGRRFHADFVGPALQAYWRRCGVRTAYEEYFLDDTYRPDPSQYRAVQVIYSWTLE 1071
RR LS V +++ AGA + GAAELD +YY+K L N P+ V PAR +D A L D+ +G+ + I ++ V+ FQ+KA F D+ +DQY FDM SY YK A + +R LVR +GE L A R ++ V A +G + V LL +Q G I + + ++D W G P+ + + PATLGAA+Q +GE FH D+ A+ + ++ G++ Y+EYF+D TYRPDP+ Y+A +V+ ++L+
Sbjct: 61 RRKLLSEFLVAGGAFVLSNKKAGAEEKKPRLKGAAELDLEYYIKDLMNGNDQTPSVQTVKVLKPARNIDANFARTLEDLTFTAIVQESGLSKDEVKNRIENLKGKVQDTFQKKAPFDADNISDQYRFDMNSYVQYKVAMMSIESLIRRINLVRYVGEGVLAALAS-------RPNSSLQAFQVFDARKNGQLSTVLEQVEVLLSELQGTGFIKGYRVDAPEDLDEDWTAGFPVEVAITLEDPATLGAALQFSGERTLFHPDYAASAMSLFMKKYGIKAKYQEYFIDSTYRPDPTAYQASEVLVQFSLD 361
BLAST of mRNA_P-wetherbeei_contig1856.3.1 vs. uniprot
Match: A0A7S1GKJ5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKJ5_CYCTE) HSP 1 Score: 94.4 bits (233), Expect = 3.960e-18 Identity = 98/327 (29.97%), Postives = 140/327 (42.81%), Query Frame = 1
Query: 160 PRRHALSRRDVVAVGVIVAGIAAGAPAARAGGLGAAELDAQYYLKSLFGSN------QPWPAEPPVAAPARRLDPATASALLD-----IAARRTASAAGMPMAVFEPLIVKVRAAVEPAFQRKAAFPDDPA-DQYCFDMLSYATYKAAAEVLPDTRKRAGLVRMIGEDALEVFAPGIGREGGREQQAVPVVNVKAAGSSGPAAAAA-GVTALLRRMQAVGLIGSFTWNEE-----------LEIDGWEDGVPLSAELVVSAPATLGAAVQAAGEGRRFHADFVGPALQAYWRRCGVRTAYEEYFLDDTYRPDPSQYRAVQVIYSWTL 1068
PRR + + A+G V A GAAE D +YY++SL N +P P PPV P R L+ LLD A R G+ F +V R +F + + + D+Y FD+ SYAT++AAA++L D R VR IG E E+ VP S P ++A ALL+ G +F ++ L+ D + +G ++ + PATL A++Q GE RF +FVG L A W GV + YE YF+DD YRP+P + + +TL
Sbjct: 23 PRRFVVIHGSLAAIGASVKDAVAAQ--------GAAEYDFEYYMRSLLEGNPREGAVKPSPI-PPVPPP-RELEGPLIEILLDDKMISSATVRALGDQGINTDEFREKVVDYRRRASKSFASRCQWQRNTVTDEYFFDLTSYATWRAAADILGDYLLRDKFVRDIGRRIYESVV---------EKALVPRATTD---SQAPLTSSAKSAFALLQMFLESGFFSAFEVVDDGGAQSSSLFDALDDDDFLNGGSVNCIFRILDPATLRASLQITGERSRFSPEFVGTTLCAMWESVGVHSTYETYFVDDQYRPNPKDFFPHEQWLQFTL 327
BLAST of mRNA_P-wetherbeei_contig1856.3.1 vs. uniprot
Match: A0A7S1GNI5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNI5_CYCTE) HSP 1 Score: 82.8 bits (203), Expect = 1.770e-14 Identity = 63/195 (32.31%), Postives = 91/195 (46.67%), Query Frame = 1
Query: 520 DQYCFDMLSYATYKAAAEVLPDTRKRAGLVRMIGEDALEVFAPGIGREGGREQQAVPVVNVKAAGSSGPAAAAA-GVTALLRRMQAVGLIGSFTWNEE-----------LEIDGWEDGVPLSAELVVSAPATLGAAVQAAGEGRRFHADFVGPALQAYWRRCGVRTAYEEYFLDDTYRPDPSQYRAVQVIYSWTL 1068
D+Y FD+ SYAT++AAA++L D R VR IG E E+ VP S P ++A ALL+ G +F ++ L+ D + +G ++ + PATL A++Q GE RF +FVG L A W GV + YE YF+DD YRP+P + + +TL
Sbjct: 76 DEYFFDLTSYATWRAAADILGDYLLRDKFVRDIGRRIYESVV---------EKALVPRATTD---SQAPLTSSAKSAFALLQMFLESGFFSAFEVVDDGGAQSSSLFDALDDDDFLNGGSVNCIFRILDPATLRASLQITGERSRFSPEFVGTTLCAMWESVGVHSTYETYFVDDQYRPNPKDFFPHEQWLQFTL 258
BLAST of mRNA_P-wetherbeei_contig1856.3.1 vs. uniprot
Match: A0A7S2G6A4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G6A4_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 6.290e-14 Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 1
Query: 727 AAAAAGVTALLRRMQAVGLIGSFTWNE-ELEIDGWEDGVPLSAELVVSAPATLGAAVQAAGEGRRFHADFVGPALQAYWRRCGVRTAYEEYFLDDTYRPDPSQYRAVQVIYSWTLEP 1074
AAA G+ A ++ +G + F+ E ++ + +G P+ L V T+ A+ Q AG+G + D V A A +RRCG+ +EYFLD+TYR DP+ +R V +I WTL+P
Sbjct: 19 AAALKGLEAAAGALRDLGFMEGFSLEPAEDALEDFAEGYPVEVLLKVRTSVTMDASQQLAGQGIVYRPDLVTLAAMATFRRCGISARIDEYFLDETYRSDPNDFRPVTLIQQWTLDP 135
BLAST of mRNA_P-wetherbeei_contig1856.3.1 vs. uniprot
Match: A0A7S4BX59_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BX59_CHRCT) HSP 1 Score: 69.7 bits (169), Expect = 1.650e-9 Identity = 76/298 (25.50%), Postives = 119/298 (39.93%), Query Frame = 1
Query: 259 GAAELDAQYYLKSLFGSNQPWPAEPPVAA-PARRLDPATASALLDIAARRTASAAGMPMAVFEPLIVK------------------VRAAVEPAFQRKAAFPDDPAD--QYCFDMLSYATYKAAAEVLPDTRKRAGLVRMIGEDALEVFAPGIGREGGREQQAVPVVNVKAAGSSGPAAAAAGVTALLRRMQAVG-LIGSFTWNEELEIDGWEDGVPLSA---ELVVSAPATLGAAVQAAGEGRRFHADFVGPALQAYWRRCGVRTAYEEYFLDDTYRPDPSQYRAVQVIYSWTLEPA 1077
GAAELDA+YYL+ L G +P P P+ R+LD +A L+ + + AS G + R+ + A + +A A ++ FD+ YA + AE + + +G+ L+ +V + A AG+ +LL +A G L G F + +++ W + LS + + PA+L A+ GE R + + P L AY R CG F D YRP+P +YR Q++ TL PA
Sbjct: 97 GAAELDAEYYLRGLIG--RPAPRVDPIQPRQPRQLDAVSAGRLVGVCESQIASFLGRSVQSLRDAAASRRQRLRMEMDRTRLSGAFARSGYDGALEARANAQGSAATIGEFDFDLNLYALFSLLAEQRQASARLDEFYVQLGDALLDSIR-------------ADTESVLSTSPKSLTALCAGLKSLLEEAKATGYLAGYFIDDSDVDDALWSNDDDLSVTRISVTLERPASLNGALLLNGENARVSPELMAPTLAAYVRACGAVVKDSSQFFVDEYRPNPFEYRPSQLLLELTLAPA 379
BLAST of mRNA_P-wetherbeei_contig1856.3.1 vs. uniprot
Match: A0A7S0NX40_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NX40_9EUKA) HSP 1 Score: 63.9 bits (154), Expect = 9.730e-8 Identity = 84/316 (26.58%), Postives = 130/316 (41.14%), Query Frame = 1
Query: 235 PAARAGGL--GAAELDAQYYLKSLFGSNQPWPAEPPVAAPA----RRLDPATASALLDIAA--------RRTASAAGMPMAVFEPLIVKV-RAAVEPAFQRKAA---------------FPDDPADQYCFDMLSYATYKAAAEVLPDTRKRAGLVRMIGEDALEVFAPGIGREGGREQQAVPVVNVKAAGSSGPAAAAAGVTALLRRMQAVGLIGSFTWN-EELEIDGWEDGVPLSA---ELVVSAPATL-GAAVQAAGEGRRFHADFVGPALQAYWRRCGVRTAYEEYFLDDTYRPDPSQYRAVQVIYSWTLEPA 1077
PA A G GAAELDA+YYL+ L G PP AP R LD A + LLD A RR A A L +++ RA + AF R PDD +++ FD+ YA + +E K L + +G++ L G++++ V + + SS + G +LL+ ++ G + SF + +++ + WE LS+ + + PA+L G + + + + P L AY G D YR +P YR Q++ +TL PA
Sbjct: 30 PAQHAAGAVRGAAELDAEYYLRGLLG-------RPPTVAPRLPTPRHLDAAATTELLDAARGQVAKVLDRRDVEVANAVQAKLPRLQLEMERAILSGAFGRDGYAENRVDFGTAVTGGFVPDDCINEFAFDLQLYALFSLVSEARLPKGKLEALNQALGKELL-----------GQQRRRVQLPPL----SSKLSTVVGGCESLLQSLKKSGYLESFQLDANDVDDELWEQRSELSSTRLSVTLIGPASLRGTLLLNSASRKGISPELAAPLLDAYLCANGAIVRETSVVFVDEYRDNPFDYRPSQILLEFTLVPA 323 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1856.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1856.3.1 >prot_P-wetherbeei_contig1856.3.1 ID=prot_P-wetherbeei_contig1856.3.1|Name=mRNA_P-wetherbeei_contig1856.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=363bp SPSVPFPLTLSRISKSSSTKDPVFYAVMLLEHLLQAVAVPSLYFSSREIPback to top mRNA from alignment at P-wetherbeei_contig1856:2265..4564+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1856.3.1 ID=mRNA_P-wetherbeei_contig1856.3.1|Name=mRNA_P-wetherbeei_contig1856.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2300bp|location=Sequence derived from alignment at P-wetherbeei_contig1856:2265..4564+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1856:2265..4564+ >mRNA_P-wetherbeei_contig1856.3.1 ID=mRNA_P-wetherbeei_contig1856.3.1|Name=mRNA_P-wetherbeei_contig1856.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1089bp|location=Sequence derived from alignment at P-wetherbeei_contig1856:2265..4564+ (Phaeothamnion wetherbeei SAG_119_79)back to top |