mRNA_P-wetherbeei_contig1855.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: D8LTH1_ECTSI (Shikimate Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH1_ECTSI) HSP 1 Score: 272 bits (695), Expect = 1.140e-89 Identity = 130/217 (59.91%), Postives = 168/217 (77.42%), Query Frame = 1
Query: 1 LTMEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADW 651
L+MEV+P LRL+AAELGSRL+GTN++FVGMMGTGKS V R LADV+GRY F+DTD +IE+LLG V +VFA+DGEE FRSVE+QVLDQVHS+VK+ +ATGGG+V +NW K+ TG+VVWLD+ D+ RLSKDPE+V +RPLL+G DP+ LE LLE+R+ Y ADV V + + V D+ VV + +++DSNPP+ Q WKE+A AG +W
Sbjct: 7 LSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEGFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW 223
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A6H5JIK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK7_9PHAE) HSP 1 Score: 274 bits (701), Expect = 1.420e-89 Identity = 131/218 (60.09%), Postives = 170/218 (77.98%), Query Frame = 1
Query: 1 LTMEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWL 654
L+MEV+P LRL+AAELGSRL+GTN++FVGMMGTGKS V R LADV+GRY F+DTD +IE+LLG V +VFA+DGEEAFRSVE+QVLDQVHS+VK+ +ATGGG+V +NW K+ TG+VVWLD+ D+ RLSKDPE+V +RPLL+G DP+ LE LLE+R+ Y ADV V + + V D+ VV + +++DSNPP+ Q WKE+A AG +W+
Sbjct: 77 LSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMKPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNAILEFIDSNPPKWQKWKEKANAAGIEWV 294
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A835ZK89_9STRA (Shikimate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK89_9STRA) HSP 1 Score: 250 bits (638), Expect = 7.030e-81 Identity = 121/219 (55.25%), Postives = 164/219 (74.89%), Query Frame = 1
Query: 16 DPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYE------AADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWL 654
D +RL+ AELGS+L+GTN+YFVGMMGTGK++V RNLAD +GRY F+DTD +IEQL+ PV +VF E GEE FR +EA+VL+++HS+VKLV+ATGGG+V ++NW KL TGLVVWLD+ +DD+V RLS + E+V +R LL G D A L+A+ ++R+ MYE +ADVRV +S + V VVL V L ++DSNPP+ Q WK+ AK +G +W+
Sbjct: 14 DEAYIRLQTAELGSQLRGTNVYFVGMMGTGKTSVARNLADRMGRYTFMDTDAIIEQLMQAPVAKVFEEQGEEEFRDIEARVLNELHSYVKLVVATGGGIVKEKRNWGKLQTGLVVWLDMAIDDIVKRLSSNEEEVSKRSLLQGGDVAAKLQAIYDERKAMYEQASTSSSADVRVYVSPDDSVDAVVLSSVSELQKFIDSNPPKWQQWKDSAKASGINWV 232
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A7R9ZGS2_9STRA (Shikimate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGS2_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.310e-59 Identity = 102/216 (47.22%), Postives = 141/216 (65.28%), Query Frame = 1
Query: 7 MEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWL 654
M++DP L LG RL+G+N+YFVGMMG+GKSAVG +A +G Y F+DTDE+IE+ + ++F +GEE FR EAQVLD VH++V+ VI+TGGG+V R NWSKL TG+V+WLDV + ++ R+ D RPLL DP L+ LLE+RR Y ADVR+ ++ D V VV+ LH+++D NPP + K +A+ G DW+
Sbjct: 90 MKIDPARL------LGPRLQGSNLYFVGMMGSGKSAVGDVVARRMGTYNFLDTDEIIEKATAMSIPEIFDAEGEEGFREAEAQVLDSVHAYVRCVISTGGGLVCRMGNWSKLQTGVVIWLDVDPELIIKRIEGDTN----RPLLQADDPLQKLKDLLEERREKYSQADVRIEVTEDMDENAVADLVVKELHNFIDENPPAWKKAKAKAQAEGLDWV 295
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A6U3Q8M5_9STRA (Shikimate kinase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q8M5_9STRA) HSP 1 Score: 194 bits (494), Expect = 2.890e-58 Identity = 97/217 (44.70%), Postives = 145/217 (66.82%), Query Frame = 1
Query: 7 MEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISARE-DVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWL 654
M +DP L LG RL+G+N+YFVGMMG+GKSAVG +A +G Y F+DTD +IE + + ++FA++GE+ FR +E+QVLD VH+ V+ V++TGGG+V + NW+KL +G+V+W+DVP + R+ KD + RPLL +P LE LLE+R+ Y ADVR+ ++ ++DV KVV+ LH+++D NPP + K +A+ G DW+
Sbjct: 88 MTIDPARL------LGPRLQGSNLYFVGMMGSGKSAVGDAVARRMGSYNFLDTDTIIESVTNATITEIFAQEGEDTFRDIESQVLDSVHAHVRCVVSTGGGIVKKLSNWAKLQSGVVIWIDVPPSVIYNRI-KDKDD---RPLLQNDNPLETLEKLLEERKPRYSQADVRIEVNDESMSIEDVASKVVQDLHNFIDENPPAWKIAKAKAQAEGLDWV 294
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A7S2U848_9STRA (Shikimate kinase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U848_9STRA) HSP 1 Score: 194 bits (494), Expect = 2.980e-58 Identity = 100/217 (46.08%), Postives = 138/217 (63.59%), Query Frame = 1
Query: 7 MEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWLQ 657
++ DP L L RL+GTNIYF+GMMG+GKSAVG +A +G Y F+DTDE+IE+ + +F +GEE FRS+EAQVLD VH++V+ VI+TGGG V R NWSK TG+V+WLDV D +++R+ Q RPLL +P LE LLE+R Y AD+++ I+ D V V++ LH ++D NPP + K +A+ G DW+Q
Sbjct: 90 LKADPARL------LAPRLQGTNIYFIGMMGSGKSAVGDVVARRMGSYNFLDTDEIIEKATSMSIPSIFEAEGEEGFRSIEAQVLDSVHAYVRCVISTGGGAVCRLSNWSKFQTGIVIWLDVDPDTLISRM-----QGTDRPLLQTENPLETLETLLEERTSRYSQADIQLKITPEMDANAVAEMVIKELHFFIDENPPAWKQAKAKAQAEGLDWVQ 295
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: B8C8C4_THAPS (Shikimate kinase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8C4_THAPS) HSP 1 Score: 193 bits (491), Expect = 7.950e-58 Identity = 101/217 (46.54%), Postives = 140/217 (64.52%), Query Frame = 1
Query: 4 TMEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWL 654
T++VDP L L RL+G N+YF+GMMG+GKSAVG LA +G Y F+DTD ++E+ G + ++F +GEEAFR EAQVLD VH+ V+ V++TGGG+++R QNWSKL TGLVV+L V + ++ R+ RPLL DP L +L+E+RR YE ADV V + DV+ VV LHD++D NPP + K +A++ G DW+
Sbjct: 87 TLKVDPARL------LSPRLQGCNLYFIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAAGMSIPKIFQTEGEEAFREAEAQVLDSVHAHVRCVVSTGGGMILRNQNWSKLQTGLVVYLKVEPEVIMKRIEGTD-----RPLLQTEDPLETLRSLMEERRERYEQADVVVEVEEGVDVEGAADAVVRALHDFIDDNPPAWKVAKAKAQSDGLDWV 292
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A1Z5KE71_FISSO (Shikimate kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KE71_FISSO) HSP 1 Score: 192 bits (489), Expect = 9.430e-58 Identity = 97/217 (44.70%), Postives = 140/217 (64.52%), Query Frame = 1
Query: 7 MEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWLQ 657
+++DP L L RL G N+YF+GMMG+GK++VG +A +G Y F+DTD +IE+ + ++F +GEE FR VEAQ+LD VH +V+ VI+TGGG+V R +NWSKL TGLV+WLDV + ++ R+ Q RPLL DP L+ALLE+R+ Y+ AD+RV ++ D V +V+ LH ++D NPP + K +A+ G DW+Q
Sbjct: 70 LKIDPARL------LSPRLNGANLYFIGMMGSGKTSVGEAVARRMGSYTFLDTDAIIEKATKMTIPEIFEAEGEEGFRQVEAQILDSVHPYVRCVISTGGGIVTRMENWSKLQTGLVIWLDVEPEVIIKRI-----QGTDRPLLQTEDPLKKLKALLEERKPKYKNADIRVKVTEEMDTAAVADQVIYDLHHFIDDNPPAWKLAKAKAQAEGLDWVQ 275
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A7S1Z366_TRICV (Shikimate kinase n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z366_TRICV) HSP 1 Score: 193 bits (491), Expect = 1.750e-57 Identity = 97/217 (44.70%), Postives = 140/217 (64.52%), Query Frame = 1
Query: 7 MEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWLQ 657
M++DP L LG RL+G+N+YF+GMMG+GKSAVG +A +G Y F+DTD +IE+ G + ++F +GEE FR VE Q+LD VH++V+ V++TGGG+V R QNW+KL TGLVVWLDV + ++ R+ D RPLL DP L+ LL +R Y AD+R+ ++ D V V++ LH ++D NPP + K +A+ G DW++
Sbjct: 115 MKIDPARL------LGPRLQGSNLYFIGMMGSGKSAVGDIVARRMGTYNFLDTDSIIEKATGMTIPEIFEAEGEEGFRQVEGQILDSVHAYVRCVVSTGGGIVCRLQNWAKLQTGLVVWLDVDPEVIIKRIEGD----ENRPLLQTDDPLKKLKDLLGEREERYAQADLRIEVTEDMDEDAVANMVIKELHYFIDENPPAWKKAKAKAQADGLDWVK 321
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Match: A0A448ZQW6_9STRA (Shikimate kinase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQW6_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.100e-56 Identity = 97/215 (45.12%), Postives = 142/215 (66.05%), Query Frame = 1
Query: 13 VDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFIDTDEVIEQLLGCPVHQVFAEDGEEAFRSVEAQVLDQVHSFVKLVIATGGGVVMRQQNWSKLHTGLVVWLDVPVDDVVARLSKDPEQVRRRPLLSGADPRAALEALLEQRRHMYEAADVRVVISAREDVQDVVLKVVEHLHDYVDSNPPRHQAWKEEAKTAGADWLQ 657
+DP L LG RL+G+N+Y VGMMG+GKS+VG LA +G Y F+DTDE+IE+ ++++F +GEE FR VE+QVLD VH++V+ V++TGGG+V + +NW KL TG+VVWLDV + ++ R+ + + RPLL DP L+ LLE+R Y AD+RV I+ D V ++V LH+++D NPP + K++A+ G DW+Q
Sbjct: 96 IDPARL------LGPRLQGSNLYLVGMMGSGKSSVGDKLARRMGSYKFLDTDEIIEKATKLTINEIFESEGEEGFRDVESQVLDTVHAYVRCVVSTGGGLVCKPKNWGKLQTGIVVWLDVAPEVILKRVEGNED----RPLLKTKDPLQTLKDLLEERTPKYNQADLRVEITEDMDEDAVASRIVLDLHNFIDDNPPAWKLAKQKAQEEGLDWVQ 300 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1855.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1855.3.1 >prot_P-wetherbeei_contig1855.3.1 ID=prot_P-wetherbeei_contig1855.3.1|Name=mRNA_P-wetherbeei_contig1855.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp MEVDPKNLRLRAAELGSRLKGTNIYFVGMMGTGKSAVGRNLADVIGRYGFback to top mRNA from alignment at P-wetherbeei_contig1855:1448..2676- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1855.3.1 ID=mRNA_P-wetherbeei_contig1855.3.1|Name=mRNA_P-wetherbeei_contig1855.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1229bp|location=Sequence derived from alignment at P-wetherbeei_contig1855:1448..2676- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1855:1448..2676- >mRNA_P-wetherbeei_contig1855.3.1 ID=mRNA_P-wetherbeei_contig1855.3.1|Name=mRNA_P-wetherbeei_contig1855.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=654bp|location=Sequence derived from alignment at P-wetherbeei_contig1855:1448..2676- (Phaeothamnion wetherbeei SAG_119_79)back to top |