mRNA_P-wetherbeei_contig18546.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18546.1.2 vs. uniprot
Match: A0A0H5QIE1_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QIE1_9EUKA) HSP 1 Score: 125 bits (313), Expect = 9.390e-32 Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = 3
Query: 204 FSITKRYVISAREVVDGDYECAAVLHGHEGDVKAVRWHPIERLLFSASYDDTVRVWAEDEDDWYCIDTLRRHTSTVWSLA-VEPAGERLATAGADGNLIVWK 506
F T Y + + DGD+EC +VL GH DVK VRWHP +R+L S+SYDDT+++WAEDED+W+C TLR HTSTVWS+ ++ G+R + D LI+W+
Sbjct: 92 FDSTVIYELMSTVTEDGDFECISVLQGHSQDVKCVRWHPTQRMLLSSSYDDTIKIWAEDEDEWFCTQTLRGHTSTVWSIDFLDTEGKRFISCSDDQTLIIWR 193
BLAST of mRNA_P-wetherbeei_contig18546.1.2 vs. uniprot
Match: A0A7S2Y540_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y540_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.120e-27 Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 3
Query: 249 DGDYECAAVLHGHEGDVKAVRWHPIERLLFSASYDDTVRVWAEDEDDWYCIDTLRRHTSTVWSLAVEPAG-ERLATAGADGNLIVWK 506
D ++EC VL+GH DVK V WHP E LLFSASYD+T++VW ED DDW C+DTLR H STVW L AG +RL + D ++I+W+
Sbjct: 10 DNEFECLTVLNGHTQDVKFVMWHPSEDLLFSASYDNTIKVWGEDGDDWCCVDTLRGHESTVWGLCFGGAGGKRLLSCSDDRSVILWE 96
BLAST of mRNA_P-wetherbeei_contig18546.1.2 vs. uniprot
Match: B8CDW5_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDW5_THAPS) HSP 1 Score: 110 bits (275), Expect = 4.050e-26 Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 3
Query: 249 DGDYECAAVLHGHEGDVKAV-------RWHPIERLLFSASYDDTVRVWAEDEDDWYCIDTLRRHTSTVWSLAVEPAGERLATAGADGNLIVWKRY 512
+G++EC AVL GHEGDVK++ +W + +L SASYD++++VWAE+ DWYC TL HTSTVW L + P G R + DG++ +WK Y
Sbjct: 114 EGEFECLAVLQGHEGDVKSIAFALSHGQWGEGDEILLSASYDNSIKVWAEESGDWYCAATLAVHTSTVWCLGINPGGVRFLSGSEDGSMAIWKMY 208
BLAST of mRNA_P-wetherbeei_contig18546.1.2 vs. uniprot
Match: A0A7S4I437_9STRA (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I437_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.050e-25 Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 3
Query: 249 DGDYECAAVLHGHEGDVKAV-------RWHPIERLLFSASYDDTVRVWAEDEDDWYCIDTLRR-HTSTVWSLAVEPAGERLATAGADGNLIVWKRY 512
DG++EC AVLHGH GDVK+V +W + +LFSASYDDT++ WAED DWYC TL H+STVWS+A G RL + AD +L VWK Y
Sbjct: 216 DGEFECIAVLHGHTGDVKSVAFAPSLGQWGDGDEVLFSASYDDTIKCWAEDAGDWYCAATLSSAHSSTVWSVAAAGGGARLVSGSADKSLAVWKCY 311
BLAST of mRNA_P-wetherbeei_contig18546.1.2 vs. uniprot
Match: B8CDW9_THAPS (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDW9_THAPS) HSP 1 Score: 110 bits (275), Expect = 1.780e-25 Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 3
Query: 249 DGDYECAAVLHGHEGDVKAV-------RWHPIERLLFSASYDDTVRVWAEDEDDWYCIDTLRRHTSTVWSLAVEPAGERLATAGADGNLIVWKRY 512
+G++EC AVL GHEGDVK++ +W + +L SASYD++++VWAE+ DWYC TL HTSTVW L + P G R + DG++ +WK Y
Sbjct: 216 EGEFECLAVLQGHEGDVKSIAFALSHGQWGEGDEILLSASYDNSIKVWAEESGDWYCAATLAVHTSTVWCLGINPGGVRFLSGSEDGSMAIWKMY 310
BLAST of mRNA_P-wetherbeei_contig18546.1.2 vs. uniprot
Match: A0A7S2P244_9STRA (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P244_9STRA) HSP 1 Score: 109 bits (272), Expect = 4.200e-25 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 3
Query: 255 DYECAAVLHGHEGDVKAVRWHPI-------ERLLFSASYDDTVRVWAEDEDDWYCIDTLRRHTSTVWSLAVEPAGERLATAGADGNLIVWKRY 512
++EC AVLHGH GDVK++ + P E +LFSASYDDT++ WAED DWYC +TL+ H STVW++A P G RL + D +L +WK Y
Sbjct: 190 EFECIAVLHGHAGDVKSLIFAPSNGQFGDGEDVLFSASYDDTIKCWAEDAGDWYCAETLKGHASTVWTIAAAPGGARLVSGSDDCSLGIWKCY 282
BLAST of mRNA_P-wetherbeei_contig18546.1.2 vs. uniprot
Match: A0A7S2XJA3_9STRA (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJA3_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.500e-25 Identity = 52/97 (53.61%), Postives = 62/97 (63.92%), Query Frame = 3
Query: 249 DGDYECAAVLHGHEGDVKAV-------RWHPIERLLFSASYDDTVRVWAEDEDDWYCIDTLRR--HTSTVWSLAVEPAGERLATAGADGNLIVWKRY 512
D D+EC AVL GHEGDVK V W + +L SASYDDT++VWAED DWYC TL HT T+W+LA+ P G RL + AD +L VWK Y
Sbjct: 232 DEDFECLAVLQGHEGDVKTVVFAPSHGMWGDGDEILLSASYDDTIKVWAEDGGDWYCAATLDSAVHTDTIWALALAPGGVRLVSGSADHSLAVWKCY 328
BLAST of mRNA_P-wetherbeei_contig18546.1.2 vs. uniprot
Match: A0A1E7FS82_9STRA (WD40 repeat-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FS82_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.210e-24 Identity = 48/96 (50.00%), Postives = 67/96 (69.79%), Query Frame = 3
Query: 249 DGDYECAAVLHGHEGDVKAVRWHPI-------ERLLFSASYDDTVRVWAEDEDDWYCIDTLRR-HTSTVWSLAVEPAGERLATAGADGNLIVWKRY 512
D ++EC AVL+GHEGDVK VR+ P + +L SASYDD++++WAED DWYC +++ T T+WSLAV P G R+ +A ADG+L ++K Y
Sbjct: 140 DNEFECLAVLNGHEGDVKTVRFAPSHGIWGDGDEILLSASYDDSIKIWAEDAGDWYCAFSIQDVQTDTIWSLAVAPGGGRVISASADGSLAIFKSY 235
BLAST of mRNA_P-wetherbeei_contig18546.1.2 vs. uniprot
Match: A0A448ZET5_9STRA (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZET5_9STRA) HSP 1 Score: 106 bits (264), Expect = 9.210e-24 Identity = 53/96 (55.21%), Postives = 63/96 (65.62%), Query Frame = 3
Query: 249 DGDYECAAVLHGHEGDVKAVRWHPI-------ERLLFSASYDDTVRVWAEDEDDWYCIDTLRR-HTSTVWSLAVEPAGERLATAGADGNLIVWKRY 512
D +EC AVL GHE DVKAVR+ P + LL SASYD+TVRVWAED+ DWYC +L H T+WSLAV P G R+ TA ADG L + + Y
Sbjct: 230 DNAFECLAVLDGHEADVKAVRFAPSHGAWGDGDELLLSASYDETVRVWAEDDGDWYCALSLGDLHGDTIWSLAVAPGGGRVVTASADGGLAILRCY 325
BLAST of mRNA_P-wetherbeei_contig18546.1.2 vs. uniprot
Match: A0A1Z5KA97_FISSO (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA97_FISSO) HSP 1 Score: 104 bits (259), Expect = 2.880e-23 Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 3
Query: 255 DYECAAVLHGHEGDVKAVRWHPIE-------RLLFSASYDDTVRVWAEDEDDWYCIDTLRR-HTSTVWSLAVEPAGERLATAGADGNLIVWKRY 512
++EC AVL+GHE DVK VR+ P +L S+SYDDT+RVWAED DWYC ++ H+ST+WSLA+ P+G RL + AD +L ++K Y
Sbjct: 187 EFECIAVLNGHEADVKCVRFAPSHDQWGDGAEILLSSSYDDTIRVWAEDAGDWYCAASISGVHSSTIWSLALAPSGARLVSGSADASLAIYKAY 280 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18546.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18546.1.2 >prot_P-wetherbeei_contig18546.1.2 ID=prot_P-wetherbeei_contig18546.1.2|Name=mRNA_P-wetherbeei_contig18546.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp MLLRRADGRLLLRRLLRWRRRAIPATTALSAFKRRQSAVCGPCNDWAVPAback to top mRNA from alignment at P-wetherbeei_contig18546:118..997- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18546.1.2 ID=mRNA_P-wetherbeei_contig18546.1.2|Name=mRNA_P-wetherbeei_contig18546.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=880bp|location=Sequence derived from alignment at P-wetherbeei_contig18546:118..997- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18546:118..997- >mRNA_P-wetherbeei_contig18546.1.2 ID=mRNA_P-wetherbeei_contig18546.1.2|Name=mRNA_P-wetherbeei_contig18546.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig18546:118..997- (Phaeothamnion wetherbeei SAG_119_79)back to top |